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Search of human proteins with 239747093
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747093 PREDICTED: hypothetical protein XP_002344492 [Homo
sapiens]
(272 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747093 PREDICTED: hypothetical protein XP_002344492 [Homo ... 557 e-159
gi|145301598 hypothetical protein LOC23514 [Homo sapiens] 340 1e-93
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 37 0.024
gi|37595553 ring finger protein 111 [Homo sapiens] 36 0.031
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 34 0.16
gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens] 32 0.59
gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens] 32 0.59
gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens] 32 0.59
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 32 0.59
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 32 0.59
gi|155030242 WD repeat domain 60 [Homo sapiens] 32 0.59
gi|150378537 hypothetical protein LOC55184 [Homo sapiens] 32 0.77
gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens] 31 1.3
gi|17975763 myelin transcription factor 1 [Homo sapiens] 31 1.3
gi|151101449 solute carrier family 4, sodium bicarbonate cotrans... 31 1.3
gi|122114658 hypothetical protein LOC23053 [Homo sapiens] 31 1.3
gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo sapi... 30 1.7
gi|40548408 p30 DBC protein [Homo sapiens] 30 1.7
gi|24432106 p30 DBC protein [Homo sapiens] 30 1.7
gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo sapi... 30 2.2
gi|189083826 inhibitor of growth family, member 4 isoform 3 [Hom... 30 2.2
gi|39932589 Rho GTPase activating protein 18 [Homo sapiens] 30 2.2
gi|4508005 tripartite motif-containing 26 [Homo sapiens] 30 2.2
gi|239754269 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
gi|169168665 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
gi|113417486 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
gi|239740898 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo ... 30 2.9
gi|239740777 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
gi|239740724 PREDICTED: hypothetical protein [Homo sapiens] 30 2.9
>gi|239747093 PREDICTED: hypothetical protein XP_002344492 [Homo
sapiens]
Length = 272
Score = 557 bits (1435), Expect = e-159
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MDNSIRLLEKGVSKLDGVKILPDSAHLDLFCVSATPVLLSGFHFQYFLSDGSRRESRRKR 60
MDNSIRLLEKGVSKLDGVKILPDSAHLDLFCVSATPVLLSGFHFQYFLSDGSRRESRRKR
Sbjct: 1 MDNSIRLLEKGVSKLDGVKILPDSAHLDLFCVSATPVLLSGFHFQYFLSDGSRRESRRKR 60
Query: 61 SWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTAEEKTITE 120
SWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTAEEKTITE
Sbjct: 61 SWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTAEEKTITE 120
Query: 121 KHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDR 180
KHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDR
Sbjct: 121 KHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDR 180
Query: 181 AEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKVRMKYFKTFIHFITFANHS 240
AEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKVRMKYFKTFIHFITFANHS
Sbjct: 181 AEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKVRMKYFKTFIHFITFANHS 240
Query: 241 CHFFFCFFFPVLPREQPLLTLRGFFCSLLTYL 272
CHFFFCFFFPVLPREQPLLTLRGFFCSLLTYL
Sbjct: 241 CHFFFCFFFPVLPREQPLLTLRGFFCSLLTYL 272
>gi|145301598 hypothetical protein LOC23514 [Homo sapiens]
Length = 915
Score = 340 bits (871), Expect = 1e-93
Identities = 169/172 (98%), Positives = 170/172 (98%), Gaps = 1/172 (0%)
Query: 51 GSR-RESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNP 109
GSR R S+RKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNP
Sbjct: 4 GSRARGSKRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNP 63
Query: 110 SLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDEL 169
SLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDEL
Sbjct: 64 SLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDEL 123
Query: 170 QFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPK 221
QFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPK
Sbjct: 124 QFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPK 175
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 36.6 bits (83), Expect = 0.024
Identities = 24/109 (22%), Positives = 45/109 (41%)
Query: 113 AEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFI 172
AE T K + P ++ G+ D+ L +EDK +L D+ +
Sbjct: 1538 AEPTYTTWKRARIFPMIFKKVRGLADKRGIVDLEGEEWQRRLEEEDKDYLKLTLDQEEAT 1597
Query: 173 DWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPK 221
+ ++S+ +SD E+ ++E S+ S S+E+ S P+
Sbjct: 1598 ESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPE 1646
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 36.2 bits (82), Expect = 0.031
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 19/187 (10%)
Query: 43 HFQYFLSDGSRRESRRKRSW-NTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEG 101
H Q L+ SR S R W TE S G L ++R L +SL L C +
Sbjct: 165 HSQTILNAKSRSHSARSHKWPRTETESVSG---LLMKRPCLH----GSSLRR--LPCRKR 215
Query: 102 FQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTL 161
F + + ++T +K L R K+E + + L + SSS +DLS E +
Sbjct: 216 FVKNNSS------QRTQKQKERILMQRKKREVLARRKYALLPSSS-SSSENDLSSESSSS 268
Query: 162 SQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQ--SLTSDEKLSEL 219
S + +E F+ + A ++D +E S +N+ ++TS + E+
Sbjct: 269 SSTEGEEDLFVSASENHQNNPAVPSGSIDEDVVVIEASSTPQVTANEEINVTSTDSEVEI 328
Query: 220 PKVRMKY 226
V Y
Sbjct: 329 VTVGESY 335
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 33.9 bits (76), Expect = 0.16
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 135 TSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEG 194
+ S S +D + SS SD SD D + S D DS +++SD D
Sbjct: 547 SDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSD 606
Query: 195 AVEISDCASCASNQSLTSDEKLSE 218
+ + SD + + + SD SE
Sbjct: 607 SSDSSDSSDSSDSSDSKSDSSKSE 630
Score = 33.5 bits (75), Expect = 0.20
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 132 ETTTSKSTSGLTDITWSSSGSDLSDE-DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 190
+++ S +S +D + SS SD SD D + S D D SD E+SD +
Sbjct: 1182 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSS 1241
Query: 191 DDEGAVEISDCASCASNQSLTSD 213
D + SD + + + TSD
Sbjct: 1242 DSSDSSNSSDSSDSSDSSDSTSD 1264
Score = 33.1 bits (74), Expect = 0.27
Identities = 20/83 (24%), Positives = 41/83 (49%)
Query: 132 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 191
+++ S ++S +D + SS GSD +++ S D D SD +++SD +E +
Sbjct: 831 DSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSN 890
Query: 192 DEGAVEISDCASCASNQSLTSDE 214
+ + S+ + S+ S S +
Sbjct: 891 SSDSSDSSNSSDSDSSDSSNSSD 913
Score = 32.3 bits (72), Expect = 0.45
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 132 ETTTSKSTSGLTDITWSSSGSDLSD-EDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 190
+++ S +S +D + SS SD SD D + S + D SD +++SD +
Sbjct: 1047 DSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSS 1106
Query: 191 DDEGAVEISDCASCASNQSLTSD 213
D + + SD +S +SN S +SD
Sbjct: 1107 DSSDSSDSSD-SSDSSNSSDSSD 1128
Score = 32.3 bits (72), Expect = 0.45
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 132 ETTTSKSTSGLTDITWSSSGSDLSDE-DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 190
+++ S +S +D + SS SD SD D + S D D ++ +++SD +
Sbjct: 1185 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSS 1244
Query: 191 DDEGAVEISDCASCASNQSLTSDEKLSE 218
D + + SD + + + S ++DE S+
Sbjct: 1245 DSSNSSDSSDSSDSSDSTSDSNDESDSQ 1272
Score = 30.8 bits (68), Expect = 1.3
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 132 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEI-----DSDRAEASDC 186
+++ S ++S +D + SS SD SD + S + E D + DS+ +++SD
Sbjct: 594 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDN 653
Query: 187 DEFEDDEGAVEISDC--ASCASNQSLTSDEKLS 217
+ D + SD +S +S+ S +SD S
Sbjct: 654 SDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNS 686
Score = 30.8 bits (68), Expect = 1.3
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 131 QETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFE 190
+ + +S S+ + + SS S+ SD D + S D D SD + +SD +
Sbjct: 700 ESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSS 759
Query: 191 DDEGAVEISDC--ASCASNQSLTSD 213
D + + SD +S +S+ S +SD
Sbjct: 760 DSSNSSDSSDSSDSSDSSDSSNSSD 784
Score = 30.4 bits (67), Expect = 1.7
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 132 ETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 191
+++ S ++S ++ + SS SD SD D + S + D SD +++SD + D
Sbjct: 793 DSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSD 852
Query: 192 DEGAVEISDCASCASNQSLTSD 213
+ S S +SN S +SD
Sbjct: 853 SD-----SSNRSDSSNSSDSSD 869
Score = 29.3 bits (64), Expect = 3.8
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 133 TTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDD 192
++ S +S +D + SS S+ SD + E DSD +++SD
Sbjct: 665 SSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSS 724
Query: 193 EGAVEISDCASCASNQSLTSD 213
+ S +S +SN S +SD
Sbjct: 725 DSDSSNSSDSSDSSNSSDSSD 745
Score = 28.1 bits (61), Expect = 8.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 130 KQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEF 189
K ++ KS S +D + SS+ SD SD + S DSD +++ D
Sbjct: 539 KSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSS-------DSDSSDSDSSDSS 591
Query: 190 EDDEGAVEISDCASCASNQSLTSD 213
+ D S +S +S+ S +SD
Sbjct: 592 DSDSSDSSNSSDSSDSSDSSDSSD 615
>gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]
Length = 1515
Score = 32.0 bits (71), Expect = 0.59
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 136 SKSTSGLTDITWSSSGSDLSDE----DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 191
S+S++ ++D S + LS + +K +S LQ+++ + D E + D+ + E
Sbjct: 1045 SQSSTDISDTCAVSYSNALSPQKETSEKEISNLQQEQDKE-DEEEEQDQQMVQNGYYEET 1103
Query: 192 DEGAVEISDCASCASNQSLTSDEKLSELPKVRMKYFKTFIHFITFANHSCHFFFCFFFPV 251
D A++ + A S L +E+L++ K+ Y + I+ T C FP
Sbjct: 1104 DYSALDGTINAHYTSRDELM-EERLTKSEKINSDYLRDGINMPTVCTSGC-----LSFPS 1157
Query: 252 LPREQP 257
PRE P
Sbjct: 1158 APRESP 1163
>gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens]
Length = 1302
Score = 32.0 bits (71), Expect = 0.59
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 136 SKSTSGLTDITWSSSGSDLSDE----DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 191
S+S++ ++D S + LS + +K +S LQ+++ + D E + D+ + E
Sbjct: 832 SQSSTDISDTCAVSYSNALSPQKETSEKEISNLQQEQDKE-DEEEEQDQQMVQNGYYEET 890
Query: 192 DEGAVEISDCASCASNQSLTSDEKLSELPKVRMKYFKTFIHFITFANHSCHFFFCFFFPV 251
D A++ + A S L +E+L++ K+ Y + I+ T C FP
Sbjct: 891 DYSALDGTINAHYTSRDELM-EERLTKSEKINSDYLRDGINMPTVCTSGC-----LSFPS 944
Query: 252 LPREQP 257
PRE P
Sbjct: 945 APRESP 950
>gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]
Length = 1319
Score = 32.0 bits (71), Expect = 0.59
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 136 SKSTSGLTDITWSSSGSDLSDE----DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFED 191
S+S++ ++D S + LS + +K +S LQ+++ + D E + D+ + E
Sbjct: 849 SQSSTDISDTCAVSYSNALSPQKETSEKEISNLQQEQDKE-DEEEEQDQQMVQNGYYEET 907
Query: 192 DEGAVEISDCASCASNQSLTSDEKLSELPKVRMKYFKTFIHFITFANHSCHFFFCFFFPV 251
D A++ + A S L +E+L++ K+ Y + I+ T C FP
Sbjct: 908 DYSALDGTINAHYTSRDELM-EERLTKSEKINSDYLRDGINMPTVCTSGC-----LSFPS 961
Query: 252 LPREQP 257
PRE P
Sbjct: 962 APRESP 967
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 32.0 bits (71), Expect = 0.59
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 19/119 (15%)
Query: 63 NTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTAEEKTITEKH 122
N + PS PG + + TA AA S AW SG + + T E
Sbjct: 527 NNKAPSGPGVWGDSISSTAVSTAAAAKS-GHAW----------SGAANQEDKSPTWGEP- 574
Query: 123 LELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRA 181
P+PK + S + WS+ G D +D L L + W+ DS+R+
Sbjct: 575 ----PKPKSQHWGDGQRS---NPAWSAGGGDWADSSSVLGHLGDGKKNGSGWDADSNRS 626
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 32.0 bits (71), Expect = 0.59
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 19/119 (15%)
Query: 63 NTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTAEEKTITEKH 122
N + PS PG + + TA AA S AW SG + + T E
Sbjct: 527 NNKAPSGPGVWGDSISSTAVSTAAAAKS-GHAW----------SGAANQEDKSPTWGEP- 574
Query: 123 LELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRA 181
P+PK + S + WS+ G D +D L L + W+ DS+R+
Sbjct: 575 ----PKPKSQHWGDGQRS---NPAWSAGGGDWADSSSVLGHLGDGKKNGSGWDADSNRS 626
>gi|155030242 WD repeat domain 60 [Homo sapiens]
Length = 1066
Score = 32.0 bits (71), Expect = 0.59
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 168 ELQFIDWEIDSDRAEA--SDC-DEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKVRM 224
E++ + ++++ RA+A + C D+FED E E+ D S+ S EKL ELP +
Sbjct: 354 EIEKEETDLENARADAYTASCEDDFEDYEDDFEVCDGDDDESSNEPESREKLEELPLAQK 413
Query: 225 K 225
K
Sbjct: 414 K 414
>gi|150378537 hypothetical protein LOC55184 [Homo sapiens]
Length = 752
Score = 31.6 bits (70), Expect = 0.77
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 54 RESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTA 113
+ S +RSWN FP E PL++ G G + S GF + SG LT+
Sbjct: 142 KNSENQRSWNVNLRKFP-ESPLEIPAYG----GGSGSRPPTRQSQSPGFAHVSGQKCLTS 196
Query: 114 EEKTITEKHLE-------LCPRP 129
E ++ + L PRP
Sbjct: 197 TEIMRIQRETDFLKCAHCLAPRP 219
>gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens]
Length = 1531
Score = 30.8 bits (68), Expect = 1.3
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 18/110 (16%)
Query: 103 QNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTS--------GLTDITWSSSGSDL 154
+NT G+P E ++ LE + + T T K T+ G WS S SD
Sbjct: 1242 ENTEGSPQEDGVELEGLKQRLEKKQKREPGTKTKKQTTLAFKPIKKGKKRNPWSDSESDR 1301
Query: 155 SDEDKTLSQLQRD--------ELQFIDWEIDSDRAEASDCDEFEDDEGAV 196
S ++ R+ + +F ++DSD + SD DE DDE V
Sbjct: 1302 SSDESNFDVPPRETEPRRAATKTKF-TMDLDSDE-DFSDFDEKTDDEDFV 1349
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 30.8 bits (68), Expect = 1.3
Identities = 23/113 (20%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 113 AEE--KTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQ 170
AEE + TE+ +LCP+ ++ + +S+ ++ + +E++ + + +E
Sbjct: 221 AEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEE-- 278
Query: 171 FIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLSELPKVR 223
+ E + + E + +E E++E E + A Q TS + P++R
Sbjct: 279 --EEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELR 329
>gi|151101449 solute carrier family 4, sodium bicarbonate
cotransporter, member 9 [Homo sapiens]
Length = 959
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 18/58 (31%)
Query: 26 HLDLFCVSATPVLLSGFHFQYFLS---------DGSRRESRRKRSWNTECPSFPGERP 74
HLDLFCV+ +L S +++S D RRESR PGERP
Sbjct: 731 HLDLFCVAVLMLLTSALGLPWYVSATVISLAHMDSLRRESR---------ACAPGERP 779
>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
Length = 1842
Score = 30.8 bits (68), Expect = 1.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 168 ELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASN 207
EL F +WE D +R D D FE+D IS+ S N
Sbjct: 2 ELMFAEWE-DGERFSFEDSDRFEEDSLCSFISEAESLCQN 40
>gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo
sapiens]
Length = 1863
Score = 30.4 bits (67), Expect = 1.7
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 137 KSTSGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAV 196
K + L+ T S SDL + +++R + D + + D+ + SDC + E
Sbjct: 889 KKHAHLSQTTLSGGQSDLGYNSLSKDEVRRGDTSTEDIQEEKDK-KGSDCSSLSESESTK 947
Query: 197 EISDCASCASNQSLTSDEKLS 217
+DC S Q+ +S +L+
Sbjct: 948 GSADCLPKLSYQNSSSIVRLT 968
>gi|40548408 p30 DBC protein [Homo sapiens]
Length = 923
Score = 30.4 bits (67), Expect = 1.7
Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 18/153 (11%)
Query: 78 RRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQET---- 133
R G R SL E + E + + T EE+ I E E+ PK E
Sbjct: 550 RDFGYRVYKMLLSLPEKVVSPPEPEKEEAAKEEATKEEEAIKE---EVVKEPKDEAQNEG 606
Query: 134 --TTSKST---SGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDE 188
T S++ GL SS G + E+K + D + +D + D E
Sbjct: 607 PATESEAPLKEDGLLPKPLSSGGEE---EEKPRGEASED---LCEMALDPELLLLRDDGE 660
Query: 189 FEDDEGAVEISDCASCASNQSLTSDEKLSELPK 221
E +E S+ S ASNQS L ++PK
Sbjct: 661 EEFAGAKLEDSEVRSVASNQSEMEFSSLQDMPK 693
>gi|24432106 p30 DBC protein [Homo sapiens]
Length = 923
Score = 30.4 bits (67), Expect = 1.7
Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 18/153 (11%)
Query: 78 RRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQET---- 133
R G R SL E + E + + T EE+ I E E+ PK E
Sbjct: 550 RDFGYRVYKMLLSLPEKVVSPPEPEKEEAAKEEATKEEEAIKE---EVVKEPKDEAQNEG 606
Query: 134 --TTSKST---SGLTDITWSSSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDE 188
T S++ GL SS G + E+K + D + +D + D E
Sbjct: 607 PATESEAPLKEDGLLPKPLSSGGEE---EEKPRGEASED---LCEMALDPELLLLRDDGE 660
Query: 189 FEDDEGAVEISDCASCASNQSLTSDEKLSELPK 221
E +E S+ S ASNQS L ++PK
Sbjct: 661 EEFAGAKLEDSEVRSVASNQSEMEFSSLQDMPK 693
>gi|239752515 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 479
Score = 30.0 bits (66), Expect = 2.2
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 55 ESRRKRSWNTECPSFPG------ERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNT 105
+S+ + W T+C PG P QV G S +WL G G Q T
Sbjct: 320 QSKSREDWVTQCDGLPGPCAVGQSGPTQVGPQGQGVLAPPGSQGISWLGXGRGLQLT 376
>gi|189083826 inhibitor of growth family, member 4 isoform 3 [Homo
sapiens]
Length = 246
Score = 30.0 bits (66), Expect = 2.2
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 158 DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCASNQSLTSDEKLS 217
DK + +L D +F + ++ + E+SD D EG + A+ A ++ SDE+
Sbjct: 94 DKHIRRLDTDLARF-EADLKEKQIESSDYDSSSSKEGRTQKEKKAARARSKGKNSDEEAP 152
Query: 218 ELPKVRMKYFKTFIHF----ITFANHSCHFFFCFFFPVLPRE 255
+ + ++K +T + +TF S H PV P E
Sbjct: 153 KTAQKKLKLVRTSPEYGMPSVTFG--SVHPSDVLDMPVDPNE 192
>gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]
Length = 663
Score = 30.0 bits (66), Expect = 2.2
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 94 AWLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+WL +G T+ +PS +++T+ H + E TS G + S+
Sbjct: 2 SWLSSSQGVVLTAYHPS--GKDQTVGNSHAKA-----GEEATSSRRYGQYTMNQESTTIK 54
Query: 154 LSDE---DKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAV 196
+ ++ D+++SQ DEL D+ I+ + + S + ED E V
Sbjct: 55 VMEKPPFDRSISQDSLDELSMEDYWIELENIKKSSENSQEDQEVVV 100
>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
Length = 539
Score = 30.0 bits (66), Expect = 2.2
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 147 WSSSGSDLSDEDKTLSQLQRDELQF----IDWEIDSDRAEASDCDEFEDDEGAVEISDCA 202
WS + +E++ + + +E + DWE D D D +E E++E + C
Sbjct: 379 WSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLGDEEEEEEEEEEEVLESCM 438
Query: 203 SCASNQSLTSDEKLSELPK 221
+ S+ LS P+
Sbjct: 439 VGVARDSVKRKGDLSLRPE 457
>gi|239754269 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 35 TPVLLSGFHFQYFLSDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEA 94
T V ++G + GS + S T S G V G T A + SE
Sbjct: 105 TTVSITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVGSETTTAYTADSET 164
Query: 95 WLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
G + T+ TA +TIT P TT+ ST+G T S++GS+
Sbjct: 165 TAASTTGSEMTT---VFTAGSETIT-------PSTAGSETTTVSTAGSETTTVSTTGSE 213
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/103 (23%), Positives = 37/103 (35%)
Query: 51 GSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPS 110
GS + T S G V G T + + SE C EG + T+ + +
Sbjct: 370 GSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVSTT 429
Query: 111 LTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+ TE TT+ ST G T +++GS+
Sbjct: 430 VFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSE 472
Score = 28.1 bits (61), Expect = 8.5
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 49 SDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGN 108
S GS + T S G V AG T + SE EG + T+ +
Sbjct: 1008 STGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVS 1067
Query: 109 PSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
T +T T +L TT+ STSG T S++GS+
Sbjct: 1068 ---TTGSETTTASTADL-------ETTTVSTSGSGTTTASTAGSE 1102
>gi|169168665 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1521
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 35 TPVLLSGFHFQYFLSDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEA 94
T V ++G + GS + S T S G V G T A + SE
Sbjct: 105 TTVSITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVGSETTTAYTADSET 164
Query: 95 WLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
G + T+ TA +TIT P TT+ ST+G T S++GS+
Sbjct: 165 TAASTTGSEMTT---VFTAGSETIT-------PSTAGSETTTVSTAGSETTTVSTTGSE 213
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/103 (23%), Positives = 37/103 (35%)
Query: 51 GSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPS 110
GS + T S G V G T + + SE C EG + T+ + +
Sbjct: 370 GSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVSTT 429
Query: 111 LTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+ TE TT+ ST G T +++GS+
Sbjct: 430 VFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSE 472
Score = 28.1 bits (61), Expect = 8.5
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 49 SDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGN 108
S GS + T S G V AG T + SE EG + T+ +
Sbjct: 1008 STGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVS 1067
Query: 109 PSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
T +T T +L TT+ STSG T S++GS+
Sbjct: 1068 ---TTGSETTTASTADL-------ETTTVSTSGSGTTTASTAGSE 1102
>gi|113417486 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 35 TPVLLSGFHFQYFLSDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEA 94
T V ++G + GS + S T S G V G T A + SE
Sbjct: 105 TTVSITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVGSETTTAYTADSET 164
Query: 95 WLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
G + T+ TA +TIT P TT+ ST+G T S++GS+
Sbjct: 165 TAASTTGSEMTT---VFTAGSETIT-------PSTAGSETTTVSTAGSETTTVSTTGSE 213
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/103 (23%), Positives = 37/103 (35%)
Query: 51 GSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPS 110
GS + T S G V G T + + SE C EG + T+ + +
Sbjct: 370 GSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVSTT 429
Query: 111 LTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+ TE TT+ ST G T +++GS+
Sbjct: 430 VFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSE 472
Score = 28.1 bits (61), Expect = 8.5
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 49 SDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGN 108
S GS + T S G V AG T + SE EG + T+ +
Sbjct: 1008 STGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVS 1067
Query: 109 PSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
T +T T +L TT+ STSG T S++GS+
Sbjct: 1068 ---TTGSETTTASTADL-------ETTTVSTSGSGTTTASTAGSE 1102
>gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1542
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 35 TPVLLSGFHFQYFLSDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEA 94
T V ++G + GS + S T S G V G T A + SE
Sbjct: 126 TTVSITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVGSETTTAYTADSET 185
Query: 95 WLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
G + T+ TA +TIT P TT+ ST+G T S++GS+
Sbjct: 186 TAASTTGSEMTT---VFTAGSETIT-------PSTAGSETTTVSTAGSETTTVSTTGSE 234
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/103 (23%), Positives = 37/103 (35%)
Query: 51 GSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPS 110
GS + T S G V G T + + SE C EG + T+ + +
Sbjct: 391 GSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVSTT 450
Query: 111 LTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+ TE TT+ ST G T +++GS+
Sbjct: 451 VFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSE 493
Score = 28.1 bits (61), Expect = 8.5
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 49 SDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGN 108
S GS + T S G V AG T + SE EG + T+ +
Sbjct: 1029 STGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVS 1088
Query: 109 PSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
T +T T +L TT+ STSG T S++GS+
Sbjct: 1089 ---TTGSETTTASTADL-------ETTTVSTSGSGTTTASTAGSE 1123
>gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo
sapiens]
Length = 1521
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 35 TPVLLSGFHFQYFLSDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEA 94
T V ++G + GS + S T S G V G T A + SE
Sbjct: 105 TTVSITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVGSETTTAYTADSET 164
Query: 95 WLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
G + T+ TA +TIT P TT+ ST+G T S++GS+
Sbjct: 165 TAASTTGSEMTT---VFTAGSETIT-------PSTAGSETTTVSTAGSETTTVSTTGSE 213
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/103 (23%), Positives = 37/103 (35%)
Query: 51 GSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPS 110
GS + T S G V G T + + SE C EG + T+ + +
Sbjct: 370 GSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVSTT 429
Query: 111 LTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+ TE TT+ ST G T +++GS+
Sbjct: 430 VFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSE 472
Score = 28.1 bits (61), Expect = 8.5
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 49 SDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGN 108
S GS + T S G V AG T + SE EG + T+ +
Sbjct: 1008 STGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVS 1067
Query: 109 PSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
T +T T +L TT+ STSG T S++GS+
Sbjct: 1068 ---TTGSETTTASTADL-------ETTTVSTSGSGTTTASTAGSE 1102
>gi|239740777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 35 TPVLLSGFHFQYFLSDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEA 94
T V ++G + GS + S T S G V G T A + SE
Sbjct: 105 TTVSITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVGSETTTAYTADSET 164
Query: 95 WLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
G + T+ TA +TIT P TT+ ST+G T S++GS+
Sbjct: 165 TAASTTGSEMTT---VFTAGSETIT-------PSTAGSETTTVSTAGSETTTVSTTGSE 213
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/103 (23%), Positives = 37/103 (35%)
Query: 51 GSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPS 110
GS + T S G V G T + + SE C EG + T+ + +
Sbjct: 370 GSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVSTT 429
Query: 111 LTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+ TE TT+ ST G T +++GS+
Sbjct: 430 VFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSE 472
Score = 28.1 bits (61), Expect = 8.5
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 49 SDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGN 108
S GS + T S G V AG T + SE EG + T+ +
Sbjct: 1008 STGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVS 1067
Query: 109 PSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
T +T T +L TT+ STSG T S++GS+
Sbjct: 1068 ---TTGSETTTASTADL-------ETTTVSTSGSGTTTASTAGSE 1102
>gi|239740724 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1704
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Query: 35 TPVLLSGFHFQYFLSDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEA 94
T V ++G + GS + S T S G V G T A + SE
Sbjct: 105 TTVSITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVGSETTTAYTADSET 164
Query: 95 WLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
G + T+ TA +TIT P TT+ ST+G T S++GS+
Sbjct: 165 TAASTTGSEMTT---VFTAGSETIT-------PSTAGSETTTVSTAGSETTTVSTTGSE 213
Score = 29.6 bits (65), Expect = 2.9
Identities = 24/103 (23%), Positives = 37/103 (35%)
Query: 51 GSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGNPS 110
GS + T S G V G T + + SE C EG + T+ + +
Sbjct: 370 GSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVSTT 429
Query: 111 LTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
+ TE TT+ ST G T +++GS+
Sbjct: 430 VFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTTAGSE 472
Score = 28.1 bits (61), Expect = 8.5
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 49 SDGSRRESRRKRSWNTECPSFPGERPLQVRRAGLRTAGAAASLSEAWLRCGEGFQNTSGN 108
S GS + T S G V AG T + SE EG + T+ +
Sbjct: 1008 STGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVS 1067
Query: 109 PSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWSSSGSD 153
T +T T +L TT+ STSG T S++GS+
Sbjct: 1068 ---TTGSETTTASTADL-------ETTTVSTSGSGTTTASTAGSE 1102
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,831,259
Number of Sequences: 37866
Number of extensions: 485892
Number of successful extensions: 2042
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1793
Number of HSP's gapped (non-prelim): 276
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.