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Search of human proteins with 239746998
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo
sapiens]
(145 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo ... 306 4e-84
gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo ... 306 4e-84
gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo ... 306 4e-84
gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo ... 306 4e-84
gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo ... 306 4e-84
gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens] 293 3e-80
gi|239752467 PREDICTED: hypothetical protein [Homo sapiens] 275 1e-74
gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo ... 275 1e-74
gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens] 250 3e-67
gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens] 224 2e-59
gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens] 186 5e-48
gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo ... 186 5e-48
gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo ... 171 3e-43
gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens] 157 4e-39
gi|169217327 PREDICTED: hypothetical protein [Homo sapiens] 157 4e-39
gi|239746996 PREDICTED: similar to Testis-specific Y-encoded pro... 61 4e-10
gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo ... 60 6e-10
gi|239747006 PREDICTED: similar to testis specific protein, Y-li... 60 6e-10
gi|239746992 PREDICTED: similar to testis specific protein, Y-li... 60 6e-10
gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens] 60 6e-10
gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens] 59 1e-09
gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens] 59 2e-09
gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo ... 45 2e-05
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... 39 0.001
gi|11545835 TSPY-like 2 [Homo sapiens] 39 0.002
gi|62988322 TSPY-like 1 [Homo sapiens] 38 0.003
gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo sa... 35 0.022
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi... 35 0.022
gi|146198777 TSPY-like 6 [Homo sapiens] 35 0.022
gi|49410495 TSPY-like 5 [Homo sapiens] 35 0.029
>gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo
sapiens]
Length = 145
Score = 306 bits (784), Expect = 4e-84
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
Query: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI
Sbjct: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
Query: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
QAAVKWQTLRSLQPLPPASKDSSAC
Sbjct: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
>gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo
sapiens]
Length = 145
Score = 306 bits (784), Expect = 4e-84
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
Query: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI
Sbjct: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
Query: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
QAAVKWQTLRSLQPLPPASKDSSAC
Sbjct: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
>gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo
sapiens]
Length = 145
Score = 306 bits (784), Expect = 4e-84
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
Query: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI
Sbjct: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
Query: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
QAAVKWQTLRSLQPLPPASKDSSAC
Sbjct: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
>gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo
sapiens]
Length = 145
Score = 306 bits (784), Expect = 4e-84
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
Query: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI
Sbjct: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
Query: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
QAAVKWQTLRSLQPLPPASKDSSAC
Sbjct: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
>gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo
sapiens]
Length = 145
Score = 306 bits (784), Expect = 4e-84
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
Query: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI
Sbjct: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
Query: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
QAAVKWQTLRSLQPLPPASKDSSAC
Sbjct: 121 QAAVKWQTLRSLQPLPPASKDSSAC 145
>gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 152
Score = 293 bits (750), Expect = 3e-80
Identities = 142/152 (93%), Positives = 143/152 (94%), Gaps = 7/152 (4%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGS-------LGLWRNSAIPVTGGRMISFHPNLYFHSE 53
MSAWVGKHAEVLLCYVMDLQVRLGS + WRNSAIPVTGGRMISFHPNLYFHSE
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSWVCGRSPVSEWRNSAIPVTGGRMISFHPNLYFHSE 60
Query: 54 IIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAE 113
IIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAE
Sbjct: 61 IIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAE 120
Query: 114 LESHCVIQAAVKWQTLRSLQPLPPASKDSSAC 145
LESHCVIQAAVKWQTLRSLQPLPPASKDSSAC
Sbjct: 121 LESHCVIQAAVKWQTLRSLQPLPPASKDSSAC 152
>gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 275 bits (702), Expect = 1e-74
Identities = 131/142 (92%), Positives = 135/142 (95%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
MSAWVGKHAEVLLCYVMDLQVRLGSLG WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC
Sbjct: 170 MSAWVGKHAEVLLCYVMDLQVRLGSLGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 229
Query: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
VGILGYRVSHSTAVQRFWDHEGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVI
Sbjct: 230 VGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVI 289
Query: 121 QAAVKWQTLRSLQPLPPASKDS 142
QA VK ++L SLQPLPPAS+DS
Sbjct: 290 QAGVKGKSLGSLQPLPPASQDS 311
>gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo
sapiens]
Length = 357
Score = 275 bits (702), Expect = 1e-74
Identities = 131/142 (92%), Positives = 135/142 (95%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 60
MSAWVGKHAEVLLCYVMDLQVRLGSLG WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC
Sbjct: 170 MSAWVGKHAEVLLCYVMDLQVRLGSLGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHC 229
Query: 61 VGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVI 120
VGILGYRVSHSTAVQRFWDHEGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVI
Sbjct: 230 VGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVI 289
Query: 121 QAAVKWQTLRSLQPLPPASKDS 142
QA VK ++L SLQPLPPAS+DS
Sbjct: 290 QAGVKGKSLGSLQPLPPASQDS 311
>gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 185
Score = 250 bits (639), Expect = 3e-67
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 29 WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCR 88
WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCR
Sbjct: 69 WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCR 128
Query: 89 QYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASKDSSAC 145
QYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASKDSSAC
Sbjct: 129 QYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASKDSSAC 185
>gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 223
Score = 224 bits (572), Expect = 2e-59
Identities = 107/122 (87%), Positives = 112/122 (91%)
Query: 21 VRLGSLGLWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 80
+R G G WRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH
Sbjct: 56 LRDGFAGRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 115
Query: 81 EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140
EGQAS CRQYTSYLS FSCLAEHDC GFGRIAE+ESHCVIQA VK ++L SLQPLPPAS+
Sbjct: 116 EGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQ 175
Query: 141 DS 142
DS
Sbjct: 176 DS 177
>gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 140
Score = 186 bits (473), Expect = 5e-48
Identities = 95/143 (66%), Positives = 107/143 (74%), Gaps = 9/143 (6%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 59
MSAWV H +VLLCY+M G WRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCV 119
CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V
Sbjct: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
Query: 120 IQAAVKWQTLRSLQPLPPASKDS 142
QA VKW L SLQ LPP+ KDS
Sbjct: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
>gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo
sapiens]
Length = 140
Score = 186 bits (473), Expect = 5e-48
Identities = 95/143 (66%), Positives = 107/143 (74%), Gaps = 9/143 (6%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 59
MSAWV H +VLLCY+M G WRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCV 119
CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V
Sbjct: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
Query: 120 IQAAVKWQTLRSLQPLPPASKDS 142
QA VKW L SLQ LPP+ KDS
Sbjct: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
>gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo
sapiens]
Length = 228
Score = 171 bits (432), Expect = 3e-43
Identities = 85/122 (69%), Positives = 95/122 (77%), Gaps = 1/122 (0%)
Query: 22 RLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDH 80
R G G WRN+AI VTG R I FH NLYFH+E+I++E+CVGI GYRVSHSTAV RFWD
Sbjct: 102 RFGMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDR 161
Query: 81 EGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140
EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V QA VKW L SLQ LPP+ K
Sbjct: 162 EGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFK 221
Query: 141 DS 142
DS
Sbjct: 222 DS 223
>gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 217
Score = 157 bits (396), Expect = 4e-39
Identities = 81/114 (71%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Query: 27 GLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQAS 85
G RNSAIP TGGR+ SFH NLYFH+E+ ++E+C+GILGYR SHSTAVQ WDHEGQAS
Sbjct: 103 GKGRNSAIPGTGGRIKFSFHHNLYFHNEVTIQEYCIGILGYRESHSTAVQWLWDHEGQAS 162
Query: 86 SCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPAS 139
SCRQYTSYLS FS LA+ DCPG GRI E ESH V QA VK Q L S QP PPA+
Sbjct: 163 SCRQYTSYLSFFSPLADCDCPGSGRIPEKESHSVTQAGVKCQDLGSPQP-PPAT 215
>gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 157 bits (396), Expect = 4e-39
Identities = 81/114 (71%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Query: 27 GLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQAS 85
G RNSAIP TGGR+ SFH NLYFH+E+ ++E+C+GILGYR SHSTAVQ WDHEGQAS
Sbjct: 103 GKGRNSAIPGTGGRIKFSFHHNLYFHNEVTIQEYCIGILGYRESHSTAVQWLWDHEGQAS 162
Query: 86 SCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPAS 139
SCRQYTSYLS FS LA+ DCPG GRI E ESH V QA VK Q L S QP PPA+
Sbjct: 163 SCRQYTSYLSFFSPLADCDCPGSGRIPEKESHSVTQAGVKCQDLGSPQP-PPAT 215
>gi|239746996 PREDICTED: similar to Testis-specific Y-encoded
protein 1 [Homo sapiens]
Length = 308
Score = 60.8 bits (146), Expect = 4e-10
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGR-MISFHPNLYFHSEIIMKEH 59
MSA + E +L Y++ L+V PV + M+ F N YF +++I KE+
Sbjct: 169 MSALITDEDEDMLSYMVSLEVE--------EEKHPVHLCKIMLFFRSNPYFQNKVITKEY 220
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
V I YR SHST ++ + D+E +A R + S L+ F+ ++H+ G +IAE+
Sbjct: 221 LVNITEYRASHSTPIEWYLDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo
sapiens]
Length = 308
Score = 60.1 bits (144), Expect = 6e-10
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGR-MISFHPNLYFHSEIIMKEH 59
MSA + E +L Y++ L+V PV + M+ F N YF +++I KE+
Sbjct: 169 MSALITDEDEDMLSYMVSLEVE--------EEKHPVHLCKIMLFFRSNPYFQNKVITKEY 220
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
V I YR SHST ++ + D+E +A R + S L+ F+ ++H+ G +IAE+
Sbjct: 221 LVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|239747006 PREDICTED: similar to testis specific protein,
Y-linked 3 [Homo sapiens]
Length = 314
Score = 60.1 bits (144), Expect = 6e-10
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGR-MISFHPNLYFHSEIIMKEH 59
MSA + E +L Y++ L+V PV + M+ F N YF +++I KE+
Sbjct: 175 MSALITDEDEDMLSYMVSLEVE--------EEKHPVHLCKIMLFFRSNPYFQNKVITKEY 226
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
V I YR SHST ++ + D+E +A R + S L+ F+ ++H+ G +IAE+
Sbjct: 227 LVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 281
>gi|239746992 PREDICTED: similar to testis specific protein,
Y-linked 1 [Homo sapiens]
Length = 314
Score = 60.1 bits (144), Expect = 6e-10
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGR-MISFHPNLYFHSEIIMKEH 59
MSA + E +L Y++ L+V PV + M+ F N YF +++I KE+
Sbjct: 175 MSALITDEDEDMLSYMVSLEVE--------EEKHPVHLCKIMLFFRSNPYFQNKVITKEY 226
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
V I YR SHST ++ + D+E +A R + S L+ F+ ++H+ G +IAE+
Sbjct: 227 LVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 281
>gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]
Length = 308
Score = 60.1 bits (144), Expect = 6e-10
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGR-MISFHPNLYFHSEIIMKEH 59
MSA + E +L Y++ L+V PV + M+ F N YF +++I KE+
Sbjct: 169 MSALITDEDEDMLSYMVSLEVE--------EEKHPVHLCKIMLFFRSNPYFQNKVITKEY 220
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
V I YR SHST ++ + D+E +A R + S L+ F+ ++H+ G +IAE+
Sbjct: 221 LVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]
Length = 308
Score = 59.3 bits (142), Expect = 1e-09
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGR-MISFHPNLYFHSEIIMKEH 59
MSA + E +L Y++ L+V PV + M+ F N YF +++I KE+
Sbjct: 169 MSALITDEDEDMLSYMVSLEVG--------EEKHPVHLCKIMLFFRSNPYFQNKVITKEY 220
Query: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
V I YR SHST ++ + D+E +A R + S L+ F+ ++H+ G +IAE+
Sbjct: 221 LVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]
Length = 308
Score = 58.5 bits (140), Expect = 2e-09
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 41 MISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCL 100
M+ F N YF +++I KE+ V I YR SHST ++ + D+E +A R + S L+ F+
Sbjct: 202 MLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWF 261
Query: 101 AEHDCPGFGRIAEL 114
++H+ G +IAE+
Sbjct: 262 SDHNFAGSNKIAEI 275
>gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo
sapiens]
Length = 344
Score = 45.1 bits (105), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 89 QYTSYLSSFSCLAEHDCPGFGRIAELES 116
+Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
sapiens]
Length = 165
Score = 39.3 bits (90), Expect = 0.001
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 105 CPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASK 140
C + E+ES CV QA V+W+ L SLQP PP K
Sbjct: 18 CERTPKTCEMESRCVPQAGVQWRDLGSLQPPPPGFK 53
>gi|11545835 TSPY-like 2 [Homo sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.002
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 44 FHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSS---FSCL 100
F N YF + +I+KE G VSHST ++ W H GQ R++ + +S FS
Sbjct: 312 FQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIR--W-HRGQEPQARRHGNQDASHSFFSWF 368
Query: 101 AEHDCPGFGRIAEL 114
+ H P RIAE+
Sbjct: 369 SNHSLPEADRIAEI 382
>gi|62988322 TSPY-like 1 [Homo sapiens]
Length = 437
Score = 38.1 bits (87), Expect = 0.003
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 6 GKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGIL 64
G+ AE+L Y+ +L+V+ P TG + F N YF +++I+KE+ V
Sbjct: 295 GQDAEMLR-YITNLEVK--------ELRHPRTGCKFKFFFRRNPYFRNKLIVKEYEVRSS 345
Query: 65 GYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
G VS ST + HE Q+ R S F+ ++H P +IAE+
Sbjct: 346 GRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTWFSDHSLPESDKIAEI 395
>gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo
sapiens]
Length = 322
Score = 35.0 bits (79), Expect = 0.022
Identities = 17/28 (60%), Positives = 18/28 (64%)
Query: 116 SHCVIQAAVKWQTLRSLQPLPPASKDSS 143
SH V QA V+W L SLQPLP K SS
Sbjct: 267 SHSVTQAGVQWHNLGSLQPLPLGLKPSS 294
>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
sapiens]
Length = 440
Score = 35.0 bits (79), Expect = 0.022
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 115 ESHCVIQAAVKWQTLRSLQPLPPASKDSS 143
+S V QA V+W+ L SLQPLPP K S
Sbjct: 357 DSRSVAQAGVQWRNLGSLQPLPPGFKQFS 385
>gi|146198777 TSPY-like 6 [Homo sapiens]
Length = 410
Score = 35.0 bits (79), Expect = 0.022
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 6 GKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGIL 64
G+ AE +L Y+ +L+V+ P TG + F N YF +++I+K + V
Sbjct: 268 GQDAE-MLSYLTNLEVK--------ELRHPRTGCKFKFFFQRNPYFRNKLIVKVYEVRSF 318
Query: 65 GYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
G VS ST + H Q+ R S F+ ++H P RIA++
Sbjct: 319 GQVVSFSTLIMWRRGHGPQSFIHRNRHVICSFFTWFSDHSLPESDRIAQI 368
>gi|49410495 TSPY-like 5 [Homo sapiens]
Length = 417
Score = 34.7 bits (78), Expect = 0.029
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRMISFH--PNLYFHSEIIMKE 58
+++++ + +L Y+ L+V LGL R G I F+ N YF +++++KE
Sbjct: 262 LASFLNSQEKEVLSYLNSLEVE--ELGLARL-------GYKIKFYFDRNPYFQNKVLIKE 312
Query: 59 HCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEL 114
+ G G VS ST +Q H+ Q+ S + S F + H +I E+
Sbjct: 313 YGCGPSGQVVSRSTPIQWLPGHDLQSLSQGNPENNRSFFGWFSNHSSIESDKIVEI 368
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.134 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,911,430
Number of Sequences: 37866
Number of extensions: 231325
Number of successful extensions: 643
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 597
Number of HSP's gapped (non-prelim): 49
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.