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Search of human proteins with 239746988
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746988 PREDICTED: hypothetical protein XP_002344243 [Homo
sapiens]
(212 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746988 PREDICTED: hypothetical protein XP_002344243 [Homo ... 437 e-123
gi|239757952 PREDICTED: similar to hCG2041502 [Homo sapiens] 385 e-107
gi|239752463 PREDICTED: hypothetical protein XP_002348284 [Homo ... 385 e-107
gi|239757954 PREDICTED: similar to hCG1818242 [Homo sapiens] 146 1e-35
gi|239752461 PREDICTED: hypothetical protein XP_002348283 [Homo ... 146 1e-35
gi|239746990 PREDICTED: hypothetical protein XP_002344480 [Homo ... 146 1e-35
gi|14211935 testes development-related NYD-SP18 [Homo sapiens] 30 1.2
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 30 2.0
gi|51173720 bromodomain and PHD finger-containing protein 1 isof... 30 2.0
gi|18201913 forkhead box N1 [Homo sapiens] 30 2.0
gi|34577118 dopey family member 1 [Homo sapiens] 29 2.6
gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ... 29 3.4
gi|126723564 pecanex-like 1 [Homo sapiens] 29 3.4
gi|239753446 PREDICTED: hypothetical protein [Homo sapiens] 28 5.7
gi|154146216 pleckstrin homology domain containing, family A (ph... 28 5.7
gi|253795481 plexin B3 isoform 2 [Homo sapiens] 28 7.5
gi|29336063 plexin B3 isoform 1 [Homo sapiens] 28 7.5
gi|239751163 PREDICTED: hypothetical protein [Homo sapiens] 28 7.5
gi|239745648 PREDICTED: similar to predicted protein [Homo sapiens] 28 7.5
gi|40353727 synaptopodin isoform A [Homo sapiens] 28 7.5
gi|41281564 WD repeat domain 37 [Homo sapiens] 28 7.5
gi|38348414 von Willebrand factor C domain containing 2 [Homo sa... 28 7.5
gi|239757989 PREDICTED: similar to MAP kinase 3c [Homo sapiens] 27 9.8
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 27 9.8
gi|94981556 transglutaminase 5 isoform 1 [Homo sapiens] 27 9.8
gi|4759230 transglutaminase 5 isoform 2 [Homo sapiens] 27 9.8
gi|190886435 RALBP1 associated Eps domain containing 1 isoform a... 27 9.8
gi|190886437 RALBP1 associated Eps domain containing 1 isoform b... 27 9.8
gi|109452595 zinc finger protein 205 [Homo sapiens] 27 9.8
gi|109452593 zinc finger protein 205 [Homo sapiens] 27 9.8
>gi|239746988 PREDICTED: hypothetical protein XP_002344243 [Homo
sapiens]
Length = 212
Score = 437 bits (1124), Expect = e-123
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE
Sbjct: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
Query: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV
Sbjct: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
Query: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGESTANAPPS 180
VPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGESTANAPPS
Sbjct: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGESTANAPPS 180
Query: 181 RSPSLPSCMDLLLGNADILCEASQNSPSGLVP 212
RSPSLPSCMDLLLGNADILCEASQNSPSGLVP
Sbjct: 181 RSPSLPSCMDLLLGNADILCEASQNSPSGLVP 212
>gi|239757952 PREDICTED: similar to hCG2041502 [Homo sapiens]
Length = 192
Score = 385 bits (989), Expect = e-107
Identities = 192/212 (90%), Positives = 192/212 (90%), Gaps = 20/212 (9%)
Query: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE
Sbjct: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
Query: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV
Sbjct: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
Query: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGESTANAPPS 180
VPPHDMKHVHSWEPNSK IMGLSCGSHRKDRGESTANAPPS
Sbjct: 121 VPPHDMKHVHSWEPNSK--------------------IMGLSCGSHRKDRGESTANAPPS 160
Query: 181 RSPSLPSCMDLLLGNADILCEASQNSPSGLVP 212
RSPSLPSCMDLLLGNADILCEASQNSPSGLVP
Sbjct: 161 RSPSLPSCMDLLLGNADILCEASQNSPSGLVP 192
>gi|239752463 PREDICTED: hypothetical protein XP_002348284 [Homo
sapiens]
Length = 192
Score = 385 bits (989), Expect = e-107
Identities = 192/212 (90%), Positives = 192/212 (90%), Gaps = 20/212 (9%)
Query: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE
Sbjct: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
Query: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV
Sbjct: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
Query: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGESTANAPPS 180
VPPHDMKHVHSWEPNSK IMGLSCGSHRKDRGESTANAPPS
Sbjct: 121 VPPHDMKHVHSWEPNSK--------------------IMGLSCGSHRKDRGESTANAPPS 160
Query: 181 RSPSLPSCMDLLLGNADILCEASQNSPSGLVP 212
RSPSLPSCMDLLLGNADILCEASQNSPSGLVP
Sbjct: 161 RSPSLPSCMDLLLGNADILCEASQNSPSGLVP 192
>gi|239757954 PREDICTED: similar to hCG1818242 [Homo sapiens]
Length = 114
Score = 146 bits (368), Expect = 1e-35
Identities = 84/148 (56%), Positives = 89/148 (60%), Gaps = 43/148 (29%)
Query: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
MKTQDDG+LPP+DVKQL WDLNLSLFLGLCLMLLLAAS LP P IMGLSH NRED QE
Sbjct: 1 MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
Query: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
STADAPP RI SQED
Sbjct: 61 STADAPP-------------------------------------------QRIKSQEDGE 77
Query: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLL 148
V P+D+KHV SWEPNS+LIQV LQT LL
Sbjct: 78 VSPNDVKHVRSWEPNSRLIQVALQTDLL 105
Score = 57.4 bits (137), Expect = 9e-09
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 115 SQEDVVVPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGEST 174
+Q+D V+PP+D+K + W+ N L + LL+ S +P IMGLS S+R+D EST
Sbjct: 3 TQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQEST 62
Query: 175 ANAPPSRSPS 184
A+APP R S
Sbjct: 63 ADAPPQRIKS 72
>gi|239752461 PREDICTED: hypothetical protein XP_002348283 [Homo
sapiens]
Length = 114
Score = 146 bits (368), Expect = 1e-35
Identities = 84/148 (56%), Positives = 89/148 (60%), Gaps = 43/148 (29%)
Query: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
MKTQDDG+LPP+DVKQL WDLNLSLFLGLCLMLLLAAS LP P IMGLSH NRED QE
Sbjct: 1 MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
Query: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
STADAPP RI SQED
Sbjct: 61 STADAPP-------------------------------------------QRIKSQEDGE 77
Query: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLL 148
V P+D+KHV SWEPNS+LIQV LQT LL
Sbjct: 78 VSPNDVKHVRSWEPNSRLIQVALQTDLL 105
Score = 57.4 bits (137), Expect = 9e-09
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 115 SQEDVVVPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGEST 174
+Q+D V+PP+D+K + W+ N L + LL+ S +P IMGLS S+R+D EST
Sbjct: 3 TQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQEST 62
Query: 175 ANAPPSRSPS 184
A+APP R S
Sbjct: 63 ADAPPQRIKS 72
>gi|239746990 PREDICTED: hypothetical protein XP_002344480 [Homo
sapiens]
Length = 114
Score = 146 bits (368), Expect = 1e-35
Identities = 84/148 (56%), Positives = 89/148 (60%), Gaps = 43/148 (29%)
Query: 1 MKTQDDGLLPPHDVKQLLDWDLNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQE 60
MKTQDDG+LPP+DVKQL WDLNLSLFLGLCLMLLLAAS LP P IMGLSH NRED QE
Sbjct: 1 MKTQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQE 60
Query: 61 STADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVV 120
STADAPP RI SQED
Sbjct: 61 STADAPP-------------------------------------------QRIKSQEDGE 77
Query: 121 VPPHDMKHVHSWEPNSKLIQVVLQTHLL 148
V P+D+KHV SWEPNS+LIQV LQT LL
Sbjct: 78 VSPNDVKHVRSWEPNSRLIQVALQTDLL 105
Score = 57.4 bits (137), Expect = 9e-09
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 115 SQEDVVVPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGEST 174
+Q+D V+PP+D+K + W+ N L + LL+ S +P IMGLS S+R+D EST
Sbjct: 3 TQDDGVLPPYDVKQLRGWDLNLSLFLGLCLMLLLAASCLPFPGIMGLSHRSNREDSQEST 62
Query: 175 ANAPPSRSPS 184
A+APP R S
Sbjct: 63 ADAPPQRIKS 72
>gi|14211935 testes development-related NYD-SP18 [Homo sapiens]
Length = 344
Score = 30.4 bits (67), Expect = 1.2
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 127 KHVHSWEPNSKLIQVVL--QTHLLSGSHVPPHRIMGLSCGSHRK-DRGESTANAPPSRSP 183
K + + +P+ LIQ++ ++ LS H+ LS S RK + ++++ SR
Sbjct: 233 KKLQASQPSESLIQLMTKGESEALSQIFADLHQQNQLSFRSSRKVETNKNSSGKDSSRED 292
Query: 184 SLPSCMDLLLGNADILCEASQNSPSGLVP 212
S+P DL + E + +PSGL P
Sbjct: 293 SIPCTCDLRWRASFTYGEWERENPSGLQP 321
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 29.6 bits (65), Expect = 2.0
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 45 RIMGLSHGYNREDRQESTADAPPWKSLYLPSCRDLSLAKVKLLDPIL--HSADCILTPSD 102
R+ LSH ED E + W S + + S K+K IL A +
Sbjct: 455 RLPALSHSEGEEDEDEEEDEGKGWSSEKVKKAKAKSRIKMKKARKILAEKRAAAPVVSVP 514
Query: 103 LIAAHTLCSRITSQEDVVVPPHDMKHVHSW------EPNSKLIQVVLQTHLLS 149
I H L S+IT++ + M+ +HS+ N + LQTHL S
Sbjct: 515 CIPPHRL-SKITNRLTIQRKSQFMQRLHSYWTLKRQSRNGVPLLRRLQTHLQS 566
>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform
1 [Homo sapiens]
Length = 1220
Score = 29.6 bits (65), Expect = 2.0
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 45 RIMGLSHGYNREDRQESTADAPPWKSLYLPSCRDLSLAKVKLLDPIL--HSADCILTPSD 102
R+ LSH ED E + W S + + S K+K IL A +
Sbjct: 455 RLPALSHSEGEEDEDEEEDEGKGWSSEKVKKAKAKSRIKMKKARKILAEKRAAAPVVSVP 514
Query: 103 LIAAHTLCSRITSQEDVVVPPHDMKHVHSW------EPNSKLIQVVLQTHLLS 149
I H L S+IT++ + M+ +HS+ N + LQTHL S
Sbjct: 515 CIPPHRL-SKITNRLTIQRKSQFMQRLHSYWTLKRQSRNGVPLLRRLQTHLQS 566
>gi|18201913 forkhead box N1 [Homo sapiens]
Length = 648
Score = 29.6 bits (65), Expect = 2.0
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 142 VLQTHLLSGSHVPPHRIMGLSCGSHRKDRGESTANAPPSRSPSLP 186
++Q L GS P + G SC S D PP R+PSLP
Sbjct: 27 LMQAPGLPGSPAPQSKHAGFSCSSFVSD-------GPPERTPSLP 64
>gi|34577118 dopey family member 1 [Homo sapiens]
Length = 2465
Score = 29.3 bits (64), Expect = 2.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 39 SRLPSPRIMGLSHGYNREDRQESTADAPPWKSLYLPSCRDLSLA 82
SR P + GL Y + ++ ++ W +LYL +C+ L LA
Sbjct: 2265 SRTSGPSVAGLETTYTGGNGFSTSYNSQRWLNLYLSACKFLDLA 2308
>gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
sapiens]
Length = 177
Score = 28.9 bits (63), Expect = 3.4
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 106 AHTLCSRIT----SQEDVVVPPHDMKHVHSWEPNSKLIQVVLQTHLLSGSHVPPHRIMGL 161
AH+ C R S P H++S + +L+ V + T S P
Sbjct: 68 AHSSCRRAVRPGLSVAGKASAPRPASHLYS-KLRPRLVSVTVSTSSPSAWKPSP-----A 121
Query: 162 SCGSHRKDRGESTANAPPSRSPSLP 186
+C S KD +++ PPS P+ P
Sbjct: 122 NCSSSGKDEAAASSTTPPSMGPAAP 146
>gi|126723564 pecanex-like 1 [Homo sapiens]
Length = 2341
Score = 28.9 bits (63), Expect = 3.4
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 140 QVVLQTHLLSGSHVPPHRIMGLSCGSHRKDRGE-STANA-----PPSRSPSLPSCMDLLL 193
Q V + H + PP ++G +G+ STA PPS++ L + LL+
Sbjct: 791 QAVRRRHNAGSNPTPPTLLIGSPLSLQDGQQGQQSTAQVKVQSRPPSQAAVLSASASLLV 850
Query: 194 GNADILCEASQNSPSGL 210
N + EAS ++ S +
Sbjct: 851 RNGSVHLEASHDNASAV 867
>gi|239753446 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 28.1 bits (61), Expect = 5.7
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 155 PHRIMGLSCGSHRKDRGESTANAPPSRSPS 184
PHR++ SC ++D +S+ +APP SPS
Sbjct: 33 PHRLLLQSCAPVQRDAPDSSTSAPPP-SPS 61
>gi|154146216 pleckstrin homology domain containing, family A
(phosphoinositide binding specific) member 2 [Homo
sapiens]
Length = 425
Score = 28.1 bits (61), Expect = 5.7
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 72 YLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHTLCSRITSQEDVVVPPHDMKHVHS 131
Y +D + L +L + +C++ DL+ L ITS V + +HS
Sbjct: 229 YFKCEQDREPLRTIFLKDVLKTHECLVKSGDLLMRDNLFEIITSSRTFYVQADSPEDMHS 288
Query: 132 W 132
W
Sbjct: 289 W 289
>gi|253795481 plexin B3 isoform 2 [Homo sapiens]
Length = 1932
Score = 27.7 bits (60), Expect = 7.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 29 GLCLMLLLAASRLPSPRIMGLSHGYNREDRQ-ESTADAPPWKSLYLPSCR-------DLS 80
GLCL+LLL + P P + +H ++ + A AP +LY+ + +L
Sbjct: 49 GLCLLLLLLS---PPPLPLTGAHRFSAPNTTLNHLALAPGRGTLYVGAVNRLFQLSPELQ 105
Query: 81 LAKVKLLDPILHSADCI 97
L V + P++ S DC+
Sbjct: 106 LEAVAVTGPVIDSPDCV 122
>gi|29336063 plexin B3 isoform 1 [Homo sapiens]
Length = 1909
Score = 27.7 bits (60), Expect = 7.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 29 GLCLMLLLAASRLPSPRIMGLSHGYNREDRQ-ESTADAPPWKSLYLPSCR-------DLS 80
GLCL+LLL + P P + +H ++ + A AP +LY+ + +L
Sbjct: 26 GLCLLLLLLS---PPPLPLTGAHRFSAPNTTLNHLALAPGRGTLYVGAVNRLFQLSPELQ 82
Query: 81 LAKVKLLDPILHSADCI 97
L V + P++ S DC+
Sbjct: 83 LEAVAVTGPVIDSPDCV 99
>gi|239751163 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 27.7 bits (60), Expect = 7.5
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 154 PPHRIMGLSCGSHRKDRGESTANAPPSRSPSLPSCMDLLL-------GNADILCEASQNS 206
PP R+ L HRK +S PP SP LP L G + LC S
Sbjct: 31 PPQRLTHLPAALHRKLLIDSHFLIPPRFSPRLPPETALTRPHLARHGGPLEFLCLLGLCS 90
Query: 207 PSGLV 211
P G++
Sbjct: 91 PQGIL 95
>gi|239745648 PREDICTED: similar to predicted protein [Homo sapiens]
Length = 193
Score = 27.7 bits (60), Expect = 7.5
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 154 PPHRIMGLSCGSHRKDRGESTANAPPSRSPSLPSCMDLLL-------GNADILCEASQNS 206
PP R+ L HRK +S PP SP LP L G + LC S
Sbjct: 31 PPQRLTHLPAALHRKLLIDSHFLIPPRFSPRLPPETALTRPHLARHGGPLEFLCLLGLCS 90
Query: 207 PSGLV 211
P G++
Sbjct: 91 PQGIL 95
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 27.7 bits (60), Expect = 7.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 38 ASRLPSPRIMGLSHGYNREDRQESTADAPPW 68
A + P P + G +DR+ES +PPW
Sbjct: 658 AKQAPRPSFSTRNAGIEAQDRRESLPTSPPW 688
>gi|41281564 WD repeat domain 37 [Homo sapiens]
Length = 494
Score = 27.7 bits (60), Expect = 7.5
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 49 LSHGYNREDRQESTADAPPWKSLYLPSCRDLSLAKVKLLDPILHSADCILTPSDLIAAHT 108
L H D++ + P + L + S RD + DP +HS + +D T
Sbjct: 315 LVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTD-----T 369
Query: 109 LCSRITSQEDVVVPPHDMKHVHSWE 133
+ S + + D VV D + V W+
Sbjct: 370 VTSAVFTVGDNVVSGSDDRTVKVWD 394
>gi|38348414 von Willebrand factor C domain containing 2 [Homo
sapiens]
Length = 325
Score = 27.7 bits (60), Expect = 7.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 22 LNLSLFLGLCLMLLLAASRLPSPRIMGLSHGYNREDRQESTADAP 66
L+ SL + CLM+ L + +P ++ +E R+ +T D P
Sbjct: 12 LSSSLLVTCCLMVALCSPSIPLEKLAQAPEQPGQEKREHATRDGP 56
>gi|239757989 PREDICTED: similar to MAP kinase 3c [Homo sapiens]
Length = 353
Score = 27.3 bits (59), Expect = 9.8
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 143 LQTHLLSGSHVPPHRIMGLSCGSHRKDRGESTANAPPSRSPSLPSCMD----LLLGNADI 198
+Q L+S PH + L +KD S + PP+ +P+ P +D + +G+ +
Sbjct: 3 VQGTLMSRDGQTPHLLSTLGKSKRKKDLRISCMSKPPAPNPTTPRNLDSRTFITIGDTNF 62
Query: 199 LCEA 202
EA
Sbjct: 63 EVEA 66
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 27.3 bits (59), Expect = 9.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 173 STANAPPSRSPSLPSCMDLLLGNADILCEASQNSPS 208
+TA+APPS SP D LG D L + S S
Sbjct: 1739 ATASAPPSSSPGRSHSKDRTLGKPDSLLVPAVTSDS 1774
>gi|94981556 transglutaminase 5 isoform 1 [Homo sapiens]
Length = 720
Score = 27.3 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 84 VKLLDPILH-----SADCILTPSDLIAAHTLCSRITSQED 118
+KLLD LH + DC L S + + +C+ I S +D
Sbjct: 195 LKLLDKSLHFQTDPATDCALRGSPVYVSRVVCAMINSNDD 234
>gi|4759230 transglutaminase 5 isoform 2 [Homo sapiens]
Length = 638
Score = 27.3 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 84 VKLLDPILH-----SADCILTPSDLIAAHTLCSRITSQED 118
+KLLD LH + DC L S + + +C+ I S +D
Sbjct: 113 LKLLDKSLHFQTDPATDCALRGSPVYVSRVVCAMINSNDD 152
>gi|190886435 RALBP1 associated Eps domain containing 1 isoform a
[Homo sapiens]
Length = 795
Score = 27.3 bits (59), Expect = 9.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 173 STANAPPSRSPSLPS 187
S A APPS+SPS+PS
Sbjct: 392 SPAEAPPSKSPSMPS 406
>gi|190886437 RALBP1 associated Eps domain containing 1 isoform b
[Homo sapiens]
Length = 769
Score = 27.3 bits (59), Expect = 9.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 173 STANAPPSRSPSLPS 187
S A APPS+SPS+PS
Sbjct: 392 SPAEAPPSKSPSMPS 406
>gi|109452595 zinc finger protein 205 [Homo sapiens]
Length = 554
Score = 27.3 bits (59), Expect = 9.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 34 LLLAASRLPSPRIMGLSHGYNREDRQESTADAPPWKSL 71
L L LPSPRI LS DRQ + A W +
Sbjct: 85 LFLPGGALPSPRIPVLSREGRTRDRQMAAALLTAWSQM 122
>gi|109452593 zinc finger protein 205 [Homo sapiens]
Length = 554
Score = 27.3 bits (59), Expect = 9.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 34 LLLAASRLPSPRIMGLSHGYNREDRQESTADAPPWKSL 71
L L LPSPRI LS DRQ + A W +
Sbjct: 85 LFLPGGALPSPRIPVLSREGRTRDRQMAAALLTAWSQM 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,664,029
Number of Sequences: 37866
Number of extensions: 441585
Number of successful extensions: 1068
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1029
Number of HSP's gapped (non-prelim): 42
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.