Guide to the Human Genome
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Name: LOC100131128 Sequence: fasta or formatted (116aa) NCBI GI: 239746934
Description:

PREDICTED: similar to translocase of inner mitochondrial membrane 8 homolog B

Not currently referenced in the text

Other entries for this name:
alt mRNA {116aa} PREDICTED: similar to translocase of inner mitochondrial membrane...
alt prot {136aa} PREDICTED: similar to translocase of inner mitochondrial membrane...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         11           2
 C cysteine            4.3          5           1
 D aspartate           6.9          8           2
 E glutamate           8.6         10           1
 F phenylalanine       3.4          4           1
 G glycine             6.0          7           2
 H histidine           4.3          5           2
 I isoleucine          6.0          7           2
 K lysine              6.0          7           1
 L leucine             8.6         10           1
 M methionine          1.7          2           1
 N asparagine          2.6          3           1
 P proline             4.3          5           1
 Q glutamine           6.9          8           2
 R arginine            1.7          2           1
 S serine              6.0          7           2
 T threonine           6.9          8           2
 V valine              4.3          5           1
 W tryptophan          1.7          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to translocase of inner mitochon... 
LOC100131128          1.000   PREDICTED: similar to translocase of inner mitochon...
LOC100131128          0.931   PREDICTED: similar to translocase of inner mitochon...
TIMM8B                0.615   translocase of inner mitochondrial membrane 8 homolog...
TIMM8A                0.248   translocase of inner mitochondrial membrane 8 homolog...
TIMM13                0.078   translocase of inner mitochondrial membrane 13 [Homo...
TIMM8A                0.064   translocase of inner mitochondrial membrane 8 homol...
FXC1                  0.028   fractured callus expressed transcript 1 
ASPSCR1               0.014   alveolar soft part sarcoma chromosome region, candid...
LOC390561             0.014   PREDICTED: similar to hect domain and RLD 2 
LOC727909             0.009   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.009   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.009   PREDICTED: similar to Golgin subfamily A member 8-l...
PRKAG3                0.009   AMP-activated protein kinase, non-catalytic gamma-3 ...
TLR9                  0.009   toll-like receptor 9 isoform A precursor 
LPHN1                 0.009   latrophilin 1 isoform 1 precursor 
LPHN1                 0.009   latrophilin 1 isoform 2 precursor 
LOC100292061          0.005   PREDICTED: hypothetical protein XP_002345113 
LOC100289864          0.005   PREDICTED: hypothetical protein XP_002347870 
LOC100289624          0.005   PREDICTED: hypothetical protein XP_002343581 
BFSP1                 0.005   filensin isoform 1 
LOC653125             0.005   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.005   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.005   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.005   PREDICTED: similar to Golgin subfamily A member 8-l...
TNFRSF25              0.005   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.005   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.005   tumor necrosis factor receptor superfamily, member 25...
GOLGA8G               0.005   golgi autoantigen, golgin subfamily a, 8G 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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