Guide to the Human Genome
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Name: TIMM13 Sequence: fasta or formatted (95aa) NCBI GI: 11024700
Description:

translocase of inner mitochondrial membrane 13

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4          7           1
 C cysteine            4.2          4           1
 D aspartate           6.3          6           1
 E glutamate           5.3          5           1
 F phenylalanine       3.2          3           1
 G glycine            11.6         11           2
 H histidine           0.0          0           0
 I isoleucine          4.2          4           1
 K lysine              6.3          6           1
 L leucine             6.3          6           2
 M methionine          7.4          7           1
 N asparagine          5.3          5           1
 P proline             2.1          2           1
 Q glutamine           6.3          6           1
 R arginine            7.4          7           1
 S serine              7.4          7           1
 T threonine           2.1          2           1
 V valine              4.2          4           1
 W tryptophan          1.1          1           1
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of inner mitochondrial membrane 13 [Homo... 
TIMM8A                0.157   translocase of inner mitochondrial membrane 8 homolog...
TIMM8B                0.110   translocase of inner mitochondrial membrane 8 homolog...
LOC100131128          0.099   PREDICTED: similar to translocase of inner mitochon...
LOC100131128          0.099   PREDICTED: similar to translocase of inner mitochon...
LOC100131128          0.087   PREDICTED: similar to translocase of inner mitochon...
TIMM10                0.064   translocase of inner mitochondrial membrane 10 homolo...
TNFRSF11A             0.029   tumor necrosis factor receptor superfamily, member 11...
KRT4                  0.029   keratin 4 
FXC1                  0.023   fractured callus expressed transcript 1 
FBXW7                 0.006   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.006   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.006   F-box and WD repeat domain containing 7 isoform 2 [H...
LOR                   0.006   loricrin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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