Guide to the Human Genome
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Name: LOC100131128 Sequence: fasta or formatted (136aa) NCBI GI: 239757907
Description:

PREDICTED: similar to translocase of inner mitochondrial membrane 8 homolog B (yeast)

Not currently referenced in the text

Other entries for this name:
alt prot {116aa} PREDICTED: similar to translocase of inner mitochondrial membrane...
alt prot {116aa} PREDICTED: similar to translocase of inner mitochondrial membrane...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         12           2
 C cysteine            3.7          5           1
 D aspartate           6.6          9           2
 E glutamate           7.4         10           1
 F phenylalanine       3.7          5           1
 G glycine             5.1          7           2
 H histidine           4.4          6           2
 I isoleucine          5.9          8           2
 K lysine              7.4         10           1
 L leucine             8.1         11           1
 M methionine          1.5          2           1
 N asparagine          4.4          6           1
 P proline             3.7          5           1
 Q glutamine           5.9          8           2
 R arginine            2.2          3           1
 S serine              6.6          9           2
 T threonine           7.4         10           2
 V valine              3.7          5           1
 W tryptophan          2.2          3           1
 X unknown             0.7          1           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to translocase of inner mitochon... 
LOC100131128          0.787   PREDICTED: similar to translocase of inner mitochon...
LOC100131128          0.787   PREDICTED: similar to translocase of inner mitochon...
TIMM8B                0.512   translocase of inner mitochondrial membrane 8 homolog...
TIMM8A                0.190   translocase of inner mitochondrial membrane 8 homolog...
TIMM13                0.058   translocase of inner mitochondrial membrane 13 [Homo...
TIMM8A                0.031   translocase of inner mitochondrial membrane 8 homol...
FXC1                  0.023   fractured callus expressed transcript 1 
LOC390561             0.012   PREDICTED: similar to hect domain and RLD 2 
BTN1A1                0.008   butyrophilin, subfamily 1, member A1 
MYH9                  0.004   myosin, heavy polypeptide 9, non-muscle 
KIAA0317              0.004   hypothetical protein LOC9870 
NLN                   0.004   neurolysin 
TTC37                 0.004   tetratricopeptide repeat domain 37 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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