Guide to the Human Genome
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Search of human proteins with 117414148

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|117414148 hypothetical protein LOC221322 [Homo sapiens]
         (1257 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|117414148 hypothetical protein LOC221322 [Homo sapiens]           2536   0.0  
gi|92110019 hypothetical protein LOC55672 [Homo sapiens]               37   0.12 
gi|33946313 ninein isoform 4 [Homo sapiens]                            37   0.16 
gi|33946321 ninein isoform 5 [Homo sapiens]                            37   0.16 
gi|148536871 ninein isoform 1 [Homo sapiens]                           37   0.16 
gi|148536869 ninein isoform 2 [Homo sapiens]                           37   0.16 
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]    35   0.45 
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]    35   0.45 
gi|41281996 HEAT repeat containing 3 [Homo sapiens]                    35   0.59 
gi|169164497 PREDICTED: hypothetical protein [Homo sapiens]            34   1.0  
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             33   1.3  
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     33   1.7  
gi|46852390 coiled-coil domain containing 6 [Homo sapiens]             33   1.7  
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]          33   2.2  
gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap...    32   2.9  
gi|16554611 mitochondrial ribosomal protein S15 [Homo sapiens]         32   2.9  
gi|22035616 oxysterol-binding protein-like protein 7 [Homo sapiens]    32   2.9  
gi|19923268 protein-kinase, interferon-inducible double stranded...    32   3.8  
gi|54292123 lysosomal trafficking regulator [Homo sapiens]             32   3.8  
gi|116517224 coiled-coil domain containing 144B [Homo sapiens]         32   3.8  
gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo...    32   5.0  
gi|162809334 pregnancy-zone protein [Homo sapiens]                     32   5.0  
gi|55770834 centromere protein F [Homo sapiens]                        32   5.0  
gi|239750932 PREDICTED: hypothetical protein [Homo sapiens]            31   6.5  
gi|223941912 coiled-coil domain containing 135 [Homo sapiens]          31   6.5  
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap...    31   6.5  
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap...    31   6.5  
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap...    31   6.5  
gi|109637791 transcription factor-like nuclear regulator [Homo s...    31   6.5  
gi|27883882 P18SRP protein [Homo sapiens]                              31   6.5  

>gi|117414148 hypothetical protein LOC221322 [Homo sapiens]
          Length = 1257

 Score = 2536 bits (6572), Expect = 0.0
 Identities = 1257/1257 (100%), Positives = 1257/1257 (100%)

Query: 1    MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLR 60
            MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLR
Sbjct: 1    MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLR 60

Query: 61   QHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIA 120
            QHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIA
Sbjct: 61   QHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIA 120

Query: 121  VVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQ 180
            VVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQ
Sbjct: 121  VVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQ 180

Query: 181  LDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQT 240
            LDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQT
Sbjct: 181  LDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQT 240

Query: 241  FLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNEYQK 300
            FLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNEYQK
Sbjct: 241  FLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNEYQK 300

Query: 301  EAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVDTKAVWFKKWM 360
            EAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVDTKAVWFKKWM
Sbjct: 301  EAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVDTKAVWFKKWM 360

Query: 361  HAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL 420
            HAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL
Sbjct: 361  HAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL 420

Query: 421  GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCP 480
            GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCP
Sbjct: 421  GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCP 480

Query: 481  KMTSAAHSENYSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPN 540
            KMTSAAHSENYSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPN
Sbjct: 481  KMTSAAHSENYSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPN 540

Query: 541  CSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIF 600
            CSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIF
Sbjct: 541  CSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIF 600

Query: 601  SGSEMLPVVKGAFISVCRHIYSTCEGLQVLITYNLHESIAKAWKKTSLLSERIPTPVEGS 660
            SGSEMLPVVKGAFISVCRHIYSTCEGLQVLITYNLHESIAKAWKKTSLLSERIPTPVEGS
Sbjct: 601  SGSEMLPVVKGAFISVCRHIYSTCEGLQVLITYNLHESIAKAWKKTSLLSERIPTPVEGS 660

Query: 661  DSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRTGAINECVTFIFNRYAKKLQV 720
            DSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRTGAINECVTFIFNRYAKKLQV
Sbjct: 661  DSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRTGAINECVTFIFNRYAKKLQV 720

Query: 721  SRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVRVTHPRTTPVD 780
            SRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVRVTHPRTTPVD
Sbjct: 721  SRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVRVTHPRTTPVD 780

Query: 781  PIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA 840
            PIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA
Sbjct: 781  PIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA 840

Query: 841  KIRSLFNYEQSHIFGLRDFIIDGLSVERNHVLVRINLVGGPLERILPPRLLEKSDNPYPW 900
            KIRSLFNYEQSHIFGLRDFIIDGLSVERNHVLVRINLVGGPLERILPPRLLEKSDNPYPW
Sbjct: 841  KIRSLFNYEQSHIFGLRDFIIDGLSVERNHVLVRINLVGGPLERILPPRLLEKSDNPYPW 900

Query: 901  PMFSSYPLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKP 960
            PMFSSYPLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKP
Sbjct: 901  PMFSSYPLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKP 960

Query: 961  DIISGEALIELLEKFVLHLTESPSECYFPSVEYTATDANVKNESLSSVQQLGIKMTVRYG 1020
            DIISGEALIELLEKFVLHLTESPSECYFPSVEYTATDANVKNESLSSVQQLGIKMTVRYG
Sbjct: 961  DIISGEALIELLEKFVLHLTESPSECYFPSVEYTATDANVKNESLSSVQQLGIKMTVRYG 1020

Query: 1021 KFLSLLKDGAENDLTWVLKHCERFLKQQQTSIKSSLLCLQGNYAGHDWFVSSLFMIMLGD 1080
            KFLSLLKDGAENDLTWVLKHCERFLKQQQTSIKSSLLCLQGNYAGHDWFVSSLFMIMLGD
Sbjct: 1021 KFLSLLKDGAENDLTWVLKHCERFLKQQQTSIKSSLLCLQGNYAGHDWFVSSLFMIMLGD 1080

Query: 1081 KEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELP 1140
            KEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELP
Sbjct: 1081 KEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELP 1140

Query: 1141 LVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL 1200
            LVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL
Sbjct: 1141 LVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL 1200

Query: 1201 QQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST 1257
            QQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST
Sbjct: 1201 QQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST 1257


>gi|92110019 hypothetical protein LOC55672 [Homo sapiens]
          Length = 1214

 Score = 37.0 bits (84), Expect = 0.12
 Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 7/181 (3%)

Query: 33  LECAEEILLHLEETDENFHNYE---FVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECG 89
           LE  E++   L E  + F N +   FV  L   + N       EE E       + E   
Sbjct: 289 LEMNEKLRPQLAEKKQQFRNLKEKCFVTQLAGFLANQQNKYKYEECEDLIKSMLRNERQF 348

Query: 90  YDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSH 149
            +  + +  K+ +E ++YK ++H  +  +  + E +    +   + NQ  Q  +  ++  
Sbjct: 349 KEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNQHLQALLTPDEPD 408

Query: 150 SYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRY-EALQTLCSAPPSDVLNC 208
                   D    L +  +  Q  +Q +  + D  + ++V+  EA + L S+ P +V   
Sbjct: 409 K---SQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKA 465

Query: 209 E 209
           E
Sbjct: 466 E 466



 Score = 33.9 bits (76), Expect = 1.0
 Identities = 36/181 (19%), Positives = 73/181 (40%), Gaps = 7/181 (3%)

Query: 33  LECAEEILLHLEETDENFHNYE---FVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECG 89
           LE  E++   L E  + F N +   FV  L   + N       EE +       + E   
Sbjct: 18  LEINEKLRPQLAENKQQFRNLKEKCFVTQLAGFLANRQKKYKYEECKDLIKFMLRNERQF 77

Query: 90  YDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSH 149
            +  + +  K+ +E ++YK ++H  +  +  + E +    +   + NQ  Q  +  ++  
Sbjct: 78  KEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNQHLQALLTPDEPD 137

Query: 150 SYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRY-EALQTLCSAPPSDVLNC 208
                   D    L +  +  Q  +Q +  + D  + ++V+  EA + L S+ P +V   
Sbjct: 138 K---SQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKA 194

Query: 209 E 209
           E
Sbjct: 195 E 195


>gi|33946313 ninein isoform 4 [Homo sapiens]
          Length = 2096

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 12  LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71
           L+A L +   S + +  G  S    EE +  L +  E FH  +    + +H      ++ 
Sbjct: 733 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 786

Query: 72  EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129
           +EE+ K   +++Q E + G + +  +  +RT + + +++     +     + ++S+  ++
Sbjct: 787 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 846

Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168
            ++  + + Q+R++K Q E      T  C+++   L ++ K
Sbjct: 847 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 887


>gi|33946321 ninein isoform 5 [Homo sapiens]
          Length = 2090

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 12  LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71
           L+A L +   S + +  G  S    EE +  L +  E FH  +    + +H      ++ 
Sbjct: 727 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 780

Query: 72  EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129
           +EE+ K   +++Q E + G + +  +  +RT + + +++     +     + ++S+  ++
Sbjct: 781 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 840

Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168
            ++  + + Q+R++K Q E      T  C+++   L ++ K
Sbjct: 841 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 881


>gi|148536871 ninein isoform 1 [Homo sapiens]
          Length = 2046

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 12  LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71
           L+A L +   S + +  G  S    EE +  L +  E FH  +    + +H      ++ 
Sbjct: 727 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 780

Query: 72  EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129
           +EE+ K   +++Q E + G + +  +  +RT + + +++     +     + ++S+  ++
Sbjct: 781 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 840

Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168
            ++  + + Q+R++K Q E      T  C+++   L ++ K
Sbjct: 841 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 881


>gi|148536869 ninein isoform 2 [Homo sapiens]
          Length = 2133

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 31/161 (19%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 12  LQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMI 71
           L+A L +   S + +  G  S    EE +  L +  E FH  +    + +H      ++ 
Sbjct: 727 LKARLTQAQASFEREREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKH------TLE 780

Query: 72  EEEMEKCTSDRNQGE-ECGYDTVVQQVTKRTQESK-EYKEMMHYLKNIMIAVVESMINKF 129
           +EE+ K   +++Q E + G + +  +  +RT + + +++     +     + ++S+  ++
Sbjct: 781 KEELRKELLEKHQRELQEGREKMETECNRRTSQIEAQFQSDCQKVTERCESALQSLEGRY 840

Query: 130 EED--ETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYK 168
            ++  + + Q+R++K Q E      T  C+++   L ++ K
Sbjct: 841 RQELKDLQEQQREEKSQWEFEKDELTQECAEAQELLKETLK 881


>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
          Length = 237

 Score = 35.0 bits (79), Expect = 0.45
 Identities = 19/70 (27%), Positives = 35/70 (50%)

Query: 99  KRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSD 158
           KR ++ KE K+   Y  +   +   S  +   EDE + Q +++K +K +SH     + S+
Sbjct: 80  KRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSE 139

Query: 159 SDSSLNQSYK 168
           ++S    S K
Sbjct: 140 TESDSKDSLK 149



 Score = 31.6 bits (70), Expect = 5.0
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 90  YDTVVQQVTKRTQESK---EYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKE 146
           ++ V +Q+ K+ + SK   E++E M+      +      +    E  ++ ++R+KK +K+
Sbjct: 31  WEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKK-EKK 89

Query: 147 KSHSYRTDNCSDSDSSLNQS 166
           KS  Y + + S SDSS + S
Sbjct: 90  KSGRYSSSSSSSSDSSSSSS 109


>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
          Length = 247

 Score = 35.0 bits (79), Expect = 0.45
 Identities = 19/70 (27%), Positives = 35/70 (50%)

Query: 99  KRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSD 158
           KR ++ KE K+   Y  +   +   S  +   EDE + Q +++K +K +SH     + S+
Sbjct: 90  KRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSE 149

Query: 159 SDSSLNQSYK 168
           ++S    S K
Sbjct: 150 TESDSKDSLK 159



 Score = 31.6 bits (70), Expect = 5.0
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 90  YDTVVQQVTKRTQESK---EYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKE 146
           ++ V +Q+ K+ + SK   E++E M+      +      +    E  ++ ++R+KK +K+
Sbjct: 41  WEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKK-EKK 99

Query: 147 KSHSYRTDNCSDSDSSLNQS 166
           KS  Y + + S SDSS + S
Sbjct: 100 KSGRYSSSSSSSSDSSSSSS 119


>gi|41281996 HEAT repeat containing 3 [Homo sapiens]
          Length = 680

 Score = 34.7 bits (78), Expect = 0.59
 Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 42/210 (20%)

Query: 91  DTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHS 150
           + V+Q     TQ  K   E    L+N       +  +  E+DE      +++++++   +
Sbjct: 290 EMVIQMKEAETQRLKTAAEAEEILENT------NGDDLIEDDEMEGISHKRRVRRK---T 340

Query: 151 YRTDNCSDSDSSLNQSYKFC---QGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLN 207
           + +D    +D  L ++       Q  L++I++                  C+  PSD   
Sbjct: 341 FVSDLLPPTDKELRETIALLTAQQTALEIIVNMC----------------CNEDPSD--- 381

Query: 208 CENWTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLESYFLSR 267
            + W  L      S SD    F +     C    L SPL ++ E++T+L  YL    +  
Sbjct: 382 -DEWEEL------SSSDESDAFMENSFSECGGQ-LFSPLCLSHEVHTALTNYLIPKKIFE 433

Query: 268 ENHIPTLSAGVDI--TNPNMTRLLKKVRLL 295
           +   P  S  VD+   NP    L++K+  +
Sbjct: 434 KTAFPN-SIAVDLCSRNPTWKPLIRKMNTI 462


>gi|169164497 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score = 33.9 bits (76), Expect = 1.0
 Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 9/101 (8%)

Query: 1123 VYFCSTHYIEMLLKAELPLVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATC- 1181
            VY C+  YI + +   +       HM  +  + +C+ ++  C    + ++ IC YI  C 
Sbjct: 104  VYLCTYVYIYVYICMHI-----CVHMYAYMCTYVCI-YVYICIHMCISYVYICVYIYICI 157

Query: 1182 -VFLGPDYQVYICIAVFKHLQQDILQHTQTQD-LQVFLKEE 1220
             +F+     ++I I ++ H+   +  H  T   + +F ++E
Sbjct: 158  HIFVHVYIHIHIYIYIYVHIYVYVYIHIHTHTYIYIFFEKE 198


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 80/372 (21%), Positives = 141/372 (37%), Gaps = 67/372 (18%)

Query: 10  AMLQAMLRRLFQSVKEKITGAPSLE-----------------------------CAEEIL 40
           A LQ  L RL + +KEK+T +  L+                               E++L
Sbjct: 456 ADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQALQQSTTAKLREAQNDLEQVL 515

Query: 41  LHLEETDENFHNYE-FVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTK 99
             + + D+   N E  ++  +++I     S++E+E E   +    GE  G   V+ Q+  
Sbjct: 516 RQIGDKDQKIQNLEALLQKSKENI-----SLLEKEREDLYAKIQAGE--GETAVLNQL-- 566

Query: 100 RTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSH----SYRTDN 155
                   +E  H L+  +  + E + N+ E  +   +    ++Q++K+H      R  +
Sbjct: 567 --------QEKNHTLQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLS 618

Query: 156 CSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLN-----CEN 210
              S + LN      + K+  +  Q+       +  EA +T   A   + L+      ++
Sbjct: 619 LETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQD 678

Query: 211 WTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLESYFLSRENH 270
                 K+T  L        D+  + C+Q  L S L   KE Y SL +  E      E  
Sbjct: 679 KQQELNKITTQLDQVTAKLQDK-QEHCSQ--LESHLKEYKEKYLSLEQKTEEL----EGQ 731

Query: 271 IPTLSAG---VDITNPNMTRLLKKVRLLNEYQKEAPSFWIRHPEKYMEEIVESTLSLLTV 327
           I  L A    V  +     + L++ R LN    E  +  +    +  +EIV ST   L  
Sbjct: 732 IKKLEADSLEVKASKEQALQDLQQQRQLNT-DLELRATELSKQLEMEKEIVSSTRLDLQK 790

Query: 328 KHNQSHVVSQKI 339
           K      + QK+
Sbjct: 791 KSEALESIKQKL 802


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 9/127 (7%)

Query: 21  QSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTS 80
           Q + EK+     L+   E+    EE           K   + I + L + +EEE E+C  
Sbjct: 877 QLMAEKLQLQEQLQAETELCAEAEELRARL---TAKKQELEEICHDLEARVEEEEERC-- 931

Query: 81  DRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQ 140
              Q E+      +Q++ ++ +E +  ++ +   K       E+ + K EE++   +++ 
Sbjct: 932 QHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEK----VTTEAKLKKLEEEQIILEDQN 987

Query: 141 KKIQKEK 147
            K+ KEK
Sbjct: 988 CKLAKEK 994


>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
          Length = 474

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 14/146 (9%)

Query: 61  QHIGNTLGSMIE---EEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNI 117
           + I NTL   I+   +E E    +  + EE   + + +++ +   E  E ++ +   +  
Sbjct: 110 EFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEF 169

Query: 118 MIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLI 177
            +  +   I K E D    Q   +++++EK          D +++L Q  +    +L   
Sbjct: 170 QVNKLMKKIKKLENDTISKQLTLEQLRREK---------IDLENTLEQEQEALVNRLWKR 220

Query: 178 LDQLDPGQPKEVRYEALQTLCSAPPS 203
           +D+L+    K +  E L    SAPPS
Sbjct: 221 MDKLE--AEKRILQEKLDQPVSAPPS 244


>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
          Length = 2964

 Score = 32.7 bits (73), Expect = 2.2
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 51   HNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEM 110
            H++E V  +       L S+ E+   KC   R   +   YD + +Q  KR    K+Y ++
Sbjct: 1225 HSFEHVSLIPPETSTVLSSLKEKHKHKC--KRRNHDYLSYDKMKRQKRKR---KKKYPQL 1279

Query: 111  MHYLKNIMIAVVESMINKFEE 131
             +      IA +E +I++  E
Sbjct: 1280 RNRQDPDFIAELEELISRLSE 1300


>gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 432

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 124 SMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFC-QGKL---QLILD 179
           S++N+ +E+  R QE + + Q+E+ H      C   +    Q  + C Q KL   + +L+
Sbjct: 191 SLLNRRQEERLREQEERLREQEERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLE 250

Query: 180 QLDPGQPKEVRYEALQTL 197
           +++    +E R E  + L
Sbjct: 251 EVEKLLEQERRQEEQERL 268


>gi|16554611 mitochondrial ribosomal protein S15 [Homo sapiens]
          Length = 257

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 907 PLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKPD 961
           P P+  L D     GI++ +D+ K LL L++++K+ E ++  Q QF K + A P+
Sbjct: 67  PPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKK-EMLKIKQEQFMKKIVANPE 120


>gi|22035616 oxysterol-binding protein-like protein 7 [Homo sapiens]
          Length = 842

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%)

Query: 532 MKGNEASPNCSETALIHIAGILARIASVEEGLILLLYGANMNSSEESPTGAHIIAQFSKK 591
           MKG E +P  S+T+++ +A          E L+      N  S EE    + I    S++
Sbjct: 379 MKGRELTPQLSQTSILSLADSHTEFFDACEVLLSASSSENEGSEEEESCTSEITTSLSEE 438

Query: 592 LLD 594
           +LD
Sbjct: 439 MLD 441


>gi|19923268 protein-kinase, interferon-inducible double stranded
           RNA dependent inhibitor, repressor of (P58 repressor)
           [Homo sapiens]
          Length = 761

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 12/96 (12%)

Query: 202 PSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLE 261
           P D   C+ W   C +    L D  P   ++  + CA+ F  S +  T    T L     
Sbjct: 25  PRDPARCQKWVENCRR--ADLEDKTPDQLNKHYRLCAKHFETSMICRTSPYRTVL----- 77

Query: 262 SYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNE 297
                R+N IPT+       N   +R  K+++ L+E
Sbjct: 78  -----RDNAIPTIFDLTSHLNNPHSRHRKRIKELSE 108


>gi|54292123 lysosomal trafficking regulator [Homo sapiens]
          Length = 3801

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 9/122 (7%)

Query: 51   HNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEM 110
            H  + V YL + I N  G + EEE+       N  + CG+  +    + +    K  KE 
Sbjct: 2787 HGAKLVLYLSELIHNHQGELTEEELGTAELLMNALKLCGHKCIPPSASTKADLIKMIKEE 2846

Query: 111  MHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFC 170
                +       E  +NK    +T N  +Q   Q+  S   ++ + S   + + Q+    
Sbjct: 2847 QKKYE------TEEGVNKAAWQKTVNNNQQSLFQRLDS---KSKDISKIAADITQAVSLS 2897

Query: 171  QG 172
            QG
Sbjct: 2898 QG 2899


>gi|116517224 coiled-coil domain containing 144B [Homo sapiens]
          Length = 725

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 24/148 (16%)

Query: 42  HLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEME-KCTSDRNQGEECG----YDTVVQQ 96
           H+  TD NFHN    K  R     T+    ++E + + T + NQ  + G    Y ++  +
Sbjct: 413 HIFSTDNNFHNDASTKKARNPEVVTVEMKEDQEFDLQMTKNMNQNSDSGSTNNYKSLKPK 472

Query: 97  V---------TKRTQE---SKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQ 144
           +         + RT E    +E ++ M   KN +  + E  +   +E+   ++E +++++
Sbjct: 473 LENLSSLPPDSDRTSEVYLHEELQQDMQKFKNEVNTLEEEFLALKKENVQLHKEVEEEME 532

Query: 145 KEKSHSYR-----TDNCS--DSDSSLNQ 165
           K +S+S       TD  +  + D  LNQ
Sbjct: 533 KHRSNSTELSGTLTDGTTVGNDDDGLNQ 560


>gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo
           sapiens]
          Length = 248

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 17/137 (12%)

Query: 71  IEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFE 130
           I+E   KC       +E G D V   +       K  + +   L      + E  I   +
Sbjct: 68  IQEAYGKC-------KEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120

Query: 131 EDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVR 190
            D + ++ ++ + QKEK  +       +SD    ++ K  Q KL+L+    + G P    
Sbjct: 121 YDSSSSKGKKSRTQKEKKAARARSKGKNSD---EEAPKTAQKKLKLVRTSPEYGMPS--- 174

Query: 191 YEALQTLCSAPPSDVLN 207
                T  S  PSDVL+
Sbjct: 175 ----VTFGSVHPSDVLD 187


>gi|162809334 pregnancy-zone protein [Homo sapiens]
          Length = 1482

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 475 YSPSCPKMTSAAHSE-NYSPASM-----VTEVLWILSDQKECAVECLYNNIVIETLLQPI 528
           +SP+     S AH +   +P S+     V + + ++  + E +V  +YN + ++ L    
Sbjct: 568 FSPAQSPPASHAHLQVAAAPQSLCALRAVDQSVLLMKPEAELSVSSVYNLLTVKDLTNFP 627

Query: 529 HNLMKGNEASPNCSETALIHIAGILARIASVEEGLILLLYGANM----NSSEESPTGAHI 584
            N+ +  E   +C     IH   I   ++S E  +   L G  +    NS    P    +
Sbjct: 628 DNVDQQEEEQGHCPRPFFIHNGAIYVPLSSNEADIYSFLKGMGLKVFTNSKIRKPKSCSV 687

Query: 585 IAQFS 589
           I   S
Sbjct: 688 IPSVS 692


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 19/95 (20%)

Query: 71   IEEEMEKCTSDRNQ--GE-------ECGYDTVVQQVTKRTQESKEYK-EMMHYL------ 114
            +EEE+   TS+RNQ  GE           D + +++ ++TQE + ++ E +H +      
Sbjct: 1949 LEEELSVVTSERNQLRGELDTMSKKTTALDQLSEKMKEKTQELESHQSECLHCIQVAEAE 2008

Query: 115  ---KNIMIAVVESMINKFEEDETRNQERQKKIQKE 146
               K  ++  + S +++  +D+T  QE+ + ++K+
Sbjct: 2009 VKEKTELLQTLSSDVSELLKDKTHLQEKLQSLEKD 2043


>gi|239750932 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 241

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 22/117 (18%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 1085 FQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELPL-VF 1143
            + ++H ++      F++   +HI  Y+    + + IH ++ C   Y  M     + + V+
Sbjct: 58   YVYIHVYTHTYVYIFIYTC-IHICVYI---YIHTYIH-IHMCIYLYTHMYTHVYIHVYVY 112

Query: 1144 SAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHL 1200
            +   +  +  ++IC+   T  + +   +I    YI  C+++     +++CI V+ H+
Sbjct: 113  TYICIYTYMYTRICIHICTYLYTHMYVYIYTYVYIYICMYIYTYVYIHMCIYVYTHI 169


>gi|223941912 coiled-coil domain containing 135 [Homo sapiens]
          Length = 874

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 10  AMLQAMLRRL-FQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLG 68
           A  +  LRR    S   KI   P + C    +  +E T +  + YE + +L++    +  
Sbjct: 629 ASKREFLRRTEVDSKGNKIIMTPDM-CISFEVEPMEHTKKLLYQYEAMMHLKREEKLSRH 687

Query: 69  SMIEEEMEKCTSDRNQGEECGYDTVVQQV--TKRTQESKEYKEMM 111
            + E E+E     + + EE    T+   +  TKR ++SKEY+E M
Sbjct: 688 QVWESELEVLEILKLREEEEAAHTLTISIYDTKRNEKSKEYREAM 732


>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 22/161 (13%)

Query: 37  EEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQ 96
           E +LLH +  +   H  + +         ++GS +EE  +     ++  +E    ++ +Q
Sbjct: 273 EAVLLHEKLYELESHRDQMIAE-----DKSIGSPMEEREKLLKQIKDDNQEIA--SMERQ 325

Query: 97  VTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEE---------------DETRNQERQK 141
           +T   ++  ++ E +  L   +      M  K++E               +ET+NQE ++
Sbjct: 326 LTDTKEKINQFIEEIRQLDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKR 385

Query: 142 KIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLD 182
           K Q E +     ++CS + + + Q       +L+++ D L+
Sbjct: 386 KAQIEANIVALLEHCSRNINRIEQISSITNQELKMMQDDLN 426


>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 22/161 (13%)

Query: 37  EEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQ 96
           E +LLH +  +   H  + +         ++GS +EE  +     ++  +E    ++ +Q
Sbjct: 273 EAVLLHEKLYELESHRDQMIAE-----DKSIGSPMEEREKLLKQIKDDNQEIA--SMERQ 325

Query: 97  VTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEE---------------DETRNQERQK 141
           +T   ++  ++ E +  L   +      M  K++E               +ET+NQE ++
Sbjct: 326 LTDTKEKINQFIEEIRQLDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKR 385

Query: 142 KIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLD 182
           K Q E +     ++CS + + + Q       +L+++ D L+
Sbjct: 386 KAQIEANIVALLEHCSRNINRIEQISSITNQELKMMQDDLN 426


>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 22/161 (13%)

Query: 37  EEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQ 96
           E +LLH +  +   H  + +         ++GS +EE  +     ++  +E    ++ +Q
Sbjct: 273 EAVLLHEKLYELESHRDQMIAE-----DKSIGSPMEEREKLLKQIKDDNQEIA--SMERQ 325

Query: 97  VTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEE---------------DETRNQERQK 141
           +T   ++  ++ E +  L   +      M  K++E               +ET+NQE ++
Sbjct: 326 LTDTKEKINQFIEEIRQLDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKR 385

Query: 142 KIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLD 182
           K Q E +     ++CS + + + Q       +L+++ D L+
Sbjct: 386 KAQIEANIVALLEHCSRNINRIEQISSITNQELKMMQDDLN 426


>gi|109637791 transcription factor-like nuclear regulator [Homo
           sapiens]
          Length = 2624

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 111 MHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKFC 170
           M +L   M+    SMI +      R + + K  ++EK++ +R D         +  + F 
Sbjct: 310 MFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFD--FDFF 367

Query: 171 QGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFS 230
              LQ +L + +  + K V+  +L+   S  P    N +     CE +    +DPD   S
Sbjct: 368 AHLLQKVLAEEEKRKQKSVKNHSLKEKKSTKPRK--NVKVKKVACEGVN---NDPDESMS 422

Query: 231 DRI 233
            RI
Sbjct: 423 SRI 425


>gi|27883882 P18SRP protein [Homo sapiens]
          Length = 155

 Score = 31.2 bits (69), Expect = 6.5
 Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 91  DTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHS 150
           D V+   +  +++S E  E ++ L+    A+ E  IN+ EE +    + + K++K++  S
Sbjct: 39  DIVLDVSSTSSEDSDEENEELNKLQ----ALQEKRINEEEEKKKEKSKEKIKLKKKRKRS 94

Query: 151 YRTDNCSDSDSSLNQSYKF 169
           Y + + ++ D+S  +  K+
Sbjct: 95  Y-SSSSTEEDTSKQKKQKY 112


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,482,295
Number of Sequences: 37866
Number of extensions: 2076835
Number of successful extensions: 5877
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 5835
Number of HSP's gapped (non-prelim): 61
length of query: 1257
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1143
effective length of database: 13,930,794
effective search space: 15922897542
effective search space used: 15922897542
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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