Guide to the Human Genome
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Name: CFHR4 Sequence: fasta or formatted (331aa) NCBI GI: 117320518
Description:

complement factor H-related 4

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         11           3
 C cysteine            6.3         21           1
 D aspartate           4.2         14           1
 E glutamate           6.3         21           2
 F phenylalanine       3.3         11           1
 G glycine             7.6         25           2
 H histidine           1.5          5           1
 I isoleucine          6.9         23           2
 K lysine              5.1         17           1
 L leucine             5.7         19           3
 M methionine          1.5          5           1
 N asparagine          6.0         20           2
 P proline             5.7         19           4
 Q glutamine           4.2         14           1
 R arginine            2.7          9           2
 S serine             10.3         34           3
 T threonine           5.4         18           2
 V valine              4.2         14           1
 W tryptophan          1.8          6           1
 Y tyrosine            7.6         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement factor H-related 4 
CFHR3                 0.651   complement factor H-related 3 
CFHR1                 0.352   complement factor H-related 1 
LOC100293069          0.352   PREDICTED: similar to complement factor H-related 1...
CFH                   0.343   complement factor H isoform a precursor 
CFHR2                 0.282   H factor (complement)-like 3 
LOC100293069          0.260   PREDICTED: similar to complement factor H-related 1...
CFHR5                 0.253   complement factor H-related 5 
CFH                   0.195   complement factor H isoform b precursor 
F13B                  0.190   coagulation factor XIII B subunit precursor 
CSMD3                 0.080   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.080   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.080   CUB and Sushi multiple domains 3 isoform 1 
CSMD1                 0.077   CUB and Sushi multiple domains 1 
SVEP1                 0.072   polydom 
CR2                   0.065   complement component (3d/Epstein Barr virus) recepto...
CR1                   0.062   complement receptor 1 isoform S precursor 
CR1                   0.062   complement receptor 1 isoform F precursor 
CR2                   0.062   complement component (3d/Epstein Barr virus) recepto...
CR1L                  0.059   complement component (3b/4b) receptor 1-like 
SUSD4                 0.056   sushi domain containing 4 isoform b 
CD55                  0.054   decay accelerating factor for complement isoform 2 ...
CD55                  0.054   decay accelerating factor for complement isoform 1 p...
C4BPA                 0.051   complement component 4 binding protein, alpha chain p...
APOH                  0.046   apolipoprotein H precursor 
SEZ6L                 0.042   seizure related 6 homolog (mouse)-like precursor [Ho...
PAPPA2                0.036   pappalysin 2 isoform 1 
SRPX                  0.036   sushi-repeat-containing protein, X-linked 
SEZ6L2                0.035   seizure related 6 homolog (mouse)-like 2 isoform 4 ...
SEZ6L2                0.035   seizure related 6 homolog (mouse)-like 2 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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