Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SEZ6L2 Sequence: fasta or formatted (853aa) NCBI GI: 6912612
Description:

seizure related 6 homolog (mouse)-like 2 isoform 1

Referenced in:

Additional Brain Proteins
Additional Interaction Domain Families

Other entries for this name:
alt prot [910aa] seizure related 6 homolog (mouse)-like 2 isoform 2
alt prot [840aa] seizure related 6 homolog (mouse)-like 2 isoform 3
alt prot [809aa] seizure related 6 homolog (mouse)-like 2 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         47           2
 C cysteine            3.2         27           1
 D aspartate           4.1         35           2
 E glutamate           7.7         66           3
 F phenylalanine       2.6         22           2
 G glycine            10.3         88           3
 H histidine           2.6         22           2
 I isoleucine          3.5         30           2
 K lysine              1.5         13           1
 L leucine            12.1        103           3
 M methionine          1.2         10           1
 N asparagine          2.8         24           3
 P proline            10.1         86           4
 Q glutamine           3.8         32           1
 R arginine            4.8         41           3
 S serine              7.2         61           2
 T threonine           6.7         57           4
 V valine              5.5         47           2
 W tryptophan          1.4         12           1
 Y tyrosine            3.5         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   seizure related 6 homolog (mouse)-like 2 isoform 1 [H... 
SEZ6L2                0.981   seizure related 6 homolog (mouse)-like 2 isoform 3 ...
SEZ6L2                0.933   seizure related 6 homolog (mouse)-like 2 isoform 2 ...
SEZ6L2                0.755   seizure related 6 homolog (mouse)-like 2 isoform 4 ...
SEZ6                  0.436   seizure related 6 homolog isoform 2 
SEZ6L                 0.436   seizure related 6 homolog (mouse)-like precursor [Ho...
SEZ6                  0.428   seizure related 6 homolog isoform 1 
CSMD2                 0.118   CUB and Sushi multiple domains 2 
CSMD1                 0.114   CUB and Sushi multiple domains 1 
CSMD3                 0.113   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.113   CUB and Sushi multiple domains 3 isoform 1 
CSMD3                 0.104   CUB and Sushi multiple domains 3 isoform 3 
CR1                   0.044   complement receptor 1 isoform S precursor 
CR1                   0.044   complement receptor 1 isoform F precursor 
SVEP1                 0.041   polydom 
CD55                  0.041   decay accelerating factor for complement isoform 2 ...
CD55                  0.041   decay accelerating factor for complement isoform 1 p...
CR1L                  0.038   complement component (3b/4b) receptor 1-like 
SELP                  0.036   selectin P precursor 
CD46                  0.032   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.032   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.032   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.032   CD46 antigen, complement regulatory protein isoform ...
TLL2                  0.031   tolloid-like 2 
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.031   CD46 antigen, complement regulatory protein isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press