Guide to the Human Genome
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Name: CFHR2 Sequence: fasta or formatted (270aa) NCBI GI: 5031695
Description:

H factor (complement)-like 3

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.9          5           1
 C cysteine            5.9         16           1
 D aspartate           2.6          7           1
 E glutamate           7.8         21           2
 F phenylalanine       4.4         12           2
 G glycine             6.7         18           2
 H histidine           1.9          5           1
 I isoleucine          6.3         17           2
 K lysine              5.9         16           1
 L leucine             5.9         16           2
 M methionine          1.5          4           1
 N asparagine          5.9         16           2
 P proline             7.0         19           4
 Q glutamine           4.8         13           2
 R arginine            3.3          9           1
 S serine             10.4         28           2
 T threonine           5.2         14           1
 V valine              5.6         15           1
 W tryptophan          2.2          6           1
 Y tyrosine            4.8         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   H factor (complement)-like 3 
LOC100293069          0.862   PREDICTED: similar to complement factor H-related 1...
CFHR1                 0.801   complement factor H-related 1 
LOC100293069          0.801   PREDICTED: similar to complement factor H-related 1...
CFHR5                 0.434   complement factor H-related 5 
CFHR3                 0.384   complement factor H-related 3 
CFH                   0.379   complement factor H isoform a precursor 
CFHR4                 0.366   complement factor H-related 4 
F13B                  0.237   coagulation factor XIII B subunit precursor 
CFH                   0.185   complement factor H isoform b precursor 
C4BPA                 0.086   complement component 4 binding protein, alpha chain p...
CR2                   0.079   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.079   complement component (3d/Epstein Barr virus) recepto...
SVEP1                 0.075   polydom 
CR1                   0.074   complement receptor 1 isoform S precursor 
CR1                   0.074   complement receptor 1 isoform F precursor 
CD55                  0.063   decay accelerating factor for complement isoform 2 ...
CD55                  0.063   decay accelerating factor for complement isoform 1 p...
APOH                  0.063   apolipoprotein H precursor 
SUSD4                 0.057   sushi domain containing 4 isoform a 
C4BPB                 0.054   complement component 4 binding protein, beta chain i...
C4BPB                 0.054   complement component 4 binding protein, beta chain i...
C4BPB                 0.054   complement component 4 binding protein, beta chain i...
C4BPB                 0.054   complement component 4 binding protein, beta chain i...
C4BPB                 0.054   complement component 4 binding protein, beta chain is...
CR1L                  0.054   complement component (3b/4b) receptor 1-like 
CSMD1                 0.052   CUB and Sushi multiple domains 1 
PAPPA                 0.048   pregnancy-associated plasma protein A preproprotein ...
CSMD2                 0.047   CUB and Sushi multiple domains 2 
CSMD3                 0.045   CUB and Sushi multiple domains 3 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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