Guide to the Human Genome
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Name: CFHR5 Sequence: fasta or formatted (569aa) NCBI GI: 13540563
Description:

complement factor H-related 5

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.3         13           1
 C cysteine            6.3         36           1
 D aspartate           3.0         17           1
 E glutamate           7.6         43           2
 F phenylalanine       4.0         23           1
 G glycine             6.7         38           2
 H histidine           1.9         11           2
 I isoleucine          5.6         32           2
 K lysine              6.5         37           2
 L leucine             5.3         30           3
 M methionine          1.4          8           1
 N asparagine          6.5         37           2
 P proline             7.9         45           4
 Q glutamine           4.2         24           1
 R arginine            3.9         22           1
 S serine              7.4         42           2
 T threonine           5.6         32           3
 V valine              7.6         43           2
 W tryptophan          1.9         11           1
 Y tyrosine            4.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement factor H-related 5 
CFH                   0.377   complement factor H isoform a precursor 
CFHR1                 0.254   complement factor H-related 1 
LOC100293069          0.254   PREDICTED: similar to complement factor H-related 1...
F13B                  0.207   coagulation factor XIII B subunit precursor 
LOC100293069          0.204   PREDICTED: similar to complement factor H-related 1...
CFHR2                 0.201   H factor (complement)-like 3 
CFHR4                 0.145   complement factor H-related 4 
CFHR3                 0.140   complement factor H-related 3 
SVEP1                 0.085   polydom 
CR1                   0.081   complement receptor 1 isoform S precursor 
CR1                   0.081   complement receptor 1 isoform F precursor 
CFH                   0.080   complement factor H isoform b precursor 
CSMD3                 0.074   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.074   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.074   CUB and Sushi multiple domains 3 isoform 1 
CR2                   0.073   complement component (3d/Epstein Barr virus) recepto...
CSMD1                 0.072   CUB and Sushi multiple domains 1 
CR2                   0.067   complement component (3d/Epstein Barr virus) recepto...
C4BPA                 0.060   complement component 4 binding protein, alpha chain p...
CSMD2                 0.056   CUB and Sushi multiple domains 2 
CR1L                  0.054   complement component (3b/4b) receptor 1-like 
SELE                  0.052   selectin E precursor 
SELP                  0.051   selectin P precursor 
APOH                  0.039   apolipoprotein H precursor 
SUSD4                 0.039   sushi domain containing 4 isoform a 
SUSD4                 0.037   sushi domain containing 4 isoform b 
C4BPB                 0.032   complement component 4 binding protein, beta chain i...
C4BPB                 0.032   complement component 4 binding protein, beta chain i...
C4BPB                 0.032   complement component 4 binding protein, beta chain i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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