Guide to the Human Genome
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Name: CR2 Sequence: fasta or formatted (1092aa) NCBI GI: 54792123
Description:

complement component (3d/Epstein Barr virus) receptor 2 isoform 1

Referenced in:

Complement
Viral Receptors

Other entries for this name:
alt prot [1033aa] complement component (3d/Epstein Barr virus) receptor 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         51           2
 C cysteine            6.0         65           1
 D aspartate           3.1         34           1
 E glutamate           5.2         57           2
 F phenylalanine       2.9         32           2
 G glycine             9.5        104           2
 H histidine           2.8         31           2
 I isoleucine          5.0         55           2
 K lysine              4.8         52           2
 L leucine             6.5         71           3
 M methionine          1.7         19           2
 N asparagine          4.5         49           2
 P proline             8.7         95           4
 Q glutamine           3.8         41           1
 R arginine            3.9         43           1
 S serine              8.3         91           2
 T threonine           6.1         67           2
 V valine              6.7         73           2
 W tryptophan          1.6         17           1
 Y tyrosine            4.1         45           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component (3d/Epstein Barr virus) recepto... 
CR2                   0.628   complement component (3d/Epstein Barr virus) recepto...
CR1                   0.200   complement receptor 1 isoform S precursor 
CR1                   0.189   complement receptor 1 isoform F precursor 
SVEP1                 0.170   polydom 
CSMD3                 0.142   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.142   CUB and Sushi multiple domains 3 isoform 1 
CSMD3                 0.133   CUB and Sushi multiple domains 3 isoform 3 
CSMD1                 0.126   CUB and Sushi multiple domains 1 
CSMD2                 0.109   CUB and Sushi multiple domains 2 
CR1L                  0.105   complement component (3b/4b) receptor 1-like 
C4BPA                 0.096   complement component 4 binding protein, alpha chain p...
CFH                   0.087   complement factor H isoform a precursor 
SELP                  0.083   selectin P precursor 
F13B                  0.060   coagulation factor XIII B subunit precursor 
SELE                  0.058   selectin E precursor 
CD46                  0.051   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.051   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.051   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.051   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.050   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.050   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.050   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.050   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.050   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.048   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.048   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.048   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.048   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.048   CD46 antigen, complement regulatory protein isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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