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Search of human proteins with 239746688
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746688 PREDICTED: hypothetical protein [Homo sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757677 PREDICTED: hypothetical protein [Homo sapiens] 321 1e-88
gi|239752167 PREDICTED: hypothetical protein [Homo sapiens] 321 1e-88
gi|239746688 PREDICTED: hypothetical protein [Homo sapiens] 321 1e-88
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 43 1e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 43 1e-04
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 42 2e-04
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 42 2e-04
gi|153792074 proline rich 12 [Homo sapiens] 42 2e-04
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens] 41 4e-04
gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens] 41 4e-04
gi|41281612 zinc finger protein 828 [Homo sapiens] 40 0.001
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 40 0.001
gi|6912246 CD3E antigen, epsilon polypeptide associated protein ... 39 0.001
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 39 0.002
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 39 0.002
gi|157168329 formin 1 [Homo sapiens] 39 0.002
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 39 0.002
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 38 0.003
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 38 0.003
gi|7706469 Kruppel-like factor [Homo sapiens] 38 0.003
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 38 0.003
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 38 0.003
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 38 0.003
gi|8923842 forkhead box J2 [Homo sapiens] 38 0.003
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 38 0.004
gi|146134388 YLP motif containing 1 [Homo sapiens] 38 0.004
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 37 0.005
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 37 0.005
gi|55956910 meningioma 1 [Homo sapiens] 37 0.006
gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] 37 0.006
>gi|239757677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 321 bits (823), Expect = 1e-88
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP 60
MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP
Sbjct: 1 MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP 60
Query: 61 PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL 120
PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL
Sbjct: 61 PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL 120
Query: 121 VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA 152
VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA
Sbjct: 121 VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA 152
>gi|239752167 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 321 bits (823), Expect = 1e-88
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP 60
MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP
Sbjct: 1 MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP 60
Query: 61 PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL 120
PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL
Sbjct: 61 PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL 120
Query: 121 VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA 152
VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA
Sbjct: 121 VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA 152
>gi|239746688 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 321 bits (823), Expect = 1e-88
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP 60
MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP
Sbjct: 1 MLCRLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAP 60
Query: 61 PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL 120
PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL
Sbjct: 61 PPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTEARGTL 120
Query: 121 VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA 152
VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA
Sbjct: 121 VFTMNIGMMAEGPGDPRRGTDARAAAAAELRA 152
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.7 bits (99), Expect = 1e-04
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 14/93 (15%)
Query: 56 PPPAPPPSSVQESPPQLPARNPS-SGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGT 114
PPP PP SS + P+LP RN S S PPLP P R G LP + R+P G
Sbjct: 318 PPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS--GPLPPPPSERPPPPVRDPPGR 375
Query: 115 EARGTLVFTMNIGMMAEGPGDPRRGTDARAAAA 147
G + P R G+ +RA A
Sbjct: 376 S-----------GPLPPPPPVSRNGSTSRALPA 397
Score = 37.4 bits (85), Expect = 0.005
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 36 SARPSDLVGPRTSTSGPSHRPPPAPPPSSVQE---SPPQLPAR----NPSSGGHPPLPVP 88
S RP V SGP PPP S + PQLP+R +P SG PPLP P
Sbjct: 362 SERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLP-P 420
Query: 89 SRQTWGGLP 97
R + G P
Sbjct: 421 DRPSAGAPP 429
Score = 31.2 bits (69), Expect = 0.36
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 17/63 (26%)
Query: 45 PRTSTSGPSHRPPPAPPP---------SSVQESPPQ--------LPARNPSSGGHPPLPV 87
P T + +PPP PPP +V PPQ P + SS PP P
Sbjct: 253 PPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP 312
Query: 88 PSR 90
PSR
Sbjct: 313 PSR 315
Score = 30.8 bits (68), Expect = 0.46
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 12/61 (19%)
Query: 39 PSDLVGPRTSTSGPSHRPPP----------APPPSSVQESPPQLPARNPSSGGHPPLPVP 88
P VG R S + PPP P PS+ ++PP P PS G PPLP
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP--PSRPGPPPLPPS 324
Query: 89 S 89
S
Sbjct: 325 S 325
Score = 29.6 bits (65), Expect = 1.0
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 45 PRTSTSGPSHRPPPAPP--PS-SVQESP-----PQLPARNPSSGGHPPLPVPSRQTWGGL 96
P S +G + R PA P PS S +SP P LP PS+G PP P + G
Sbjct: 383 PPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQ 442
Query: 97 PVACASCWVS 106
C W S
Sbjct: 443 DSPCEDEWES 452
Score = 28.9 bits (63), Expect = 1.8
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 14/68 (20%)
Query: 32 ERARSARPSDLVGPRTSTSGPSHRPPPAPP-PSSVQESP-----PQLPA--RNPSSGGHP 83
+R R P VG S P PPP P P +Q SP P +P R PS G P
Sbjct: 165 QRNRMPPPRPDVG-----SKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTP 219
Query: 84 PLPVPSRQ 91
P P P +
Sbjct: 220 P-PFPGNR 226
Score = 27.7 bits (60), Expect = 3.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 45 PRTSTSGPSHRPPPAPPPSSVQES---PPQLPARNPSSGGHPPLPVPSRQ 91
P +S+S S+RPP P PS + PP P N S +P P Q
Sbjct: 239 PLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQ 288
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.7 bits (99), Expect = 1e-04
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 14/93 (15%)
Query: 56 PPPAPPPSSVQESPPQLPARNPS-SGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGT 114
PPP PP SS + P+LP RN S S PPLP P R G LP + R+P G
Sbjct: 318 PPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS--GPLPPPPSERPPPPVRDPPGR 375
Query: 115 EARGTLVFTMNIGMMAEGPGDPRRGTDARAAAA 147
G + P R G+ +RA A
Sbjct: 376 S-----------GPLPPPPPVSRNGSTSRALPA 397
Score = 37.4 bits (85), Expect = 0.005
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 36 SARPSDLVGPRTSTSGPSHRPPPAPPPSSVQE---SPPQLPAR----NPSSGGHPPLPVP 88
S RP V SGP PPP S + PQLP+R +P SG PPLP P
Sbjct: 362 SERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLP-P 420
Query: 89 SRQTWGGLP 97
R + G P
Sbjct: 421 DRPSAGAPP 429
Score = 31.2 bits (69), Expect = 0.36
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 17/63 (26%)
Query: 45 PRTSTSGPSHRPPPAPPP---------SSVQESPPQ--------LPARNPSSGGHPPLPV 87
P T + +PPP PPP +V PPQ P + SS PP P
Sbjct: 253 PPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP 312
Query: 88 PSR 90
PSR
Sbjct: 313 PSR 315
Score = 30.8 bits (68), Expect = 0.46
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 12/61 (19%)
Query: 39 PSDLVGPRTSTSGPSHRPPP----------APPPSSVQESPPQLPARNPSSGGHPPLPVP 88
P VG R S + PPP P PS+ ++PP P PS G PPLP
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP--PSRPGPPPLPPS 324
Query: 89 S 89
S
Sbjct: 325 S 325
Score = 29.6 bits (65), Expect = 1.0
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 45 PRTSTSGPSHRPPPAPP--PS-SVQESP-----PQLPARNPSSGGHPPLPVPSRQTWGGL 96
P S +G + R PA P PS S +SP P LP PS+G PP P + G
Sbjct: 383 PPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQ 442
Query: 97 PVACASCWVS 106
C W S
Sbjct: 443 DSPCEDEWES 452
Score = 28.9 bits (63), Expect = 1.8
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 14/68 (20%)
Query: 32 ERARSARPSDLVGPRTSTSGPSHRPPPAPP-PSSVQESP-----PQLPA--RNPSSGGHP 83
+R R P VG S P PPP P P +Q SP P +P R PS G P
Sbjct: 165 QRNRMPPPRPDVG-----SKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTP 219
Query: 84 PLPVPSRQ 91
P P P +
Sbjct: 220 P-PFPGNR 226
Score = 27.7 bits (60), Expect = 3.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 45 PRTSTSGPSHRPPPAPPPSSVQES---PPQLPARNPSSGGHPPLPVPSRQ 91
P +S+S S+RPP P PS + PP P N S +P P Q
Sbjct: 239 PLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQ 288
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 42.0 bits (97), Expect = 2e-04
Identities = 42/123 (34%), Positives = 51/123 (41%), Gaps = 15/123 (12%)
Query: 38 RPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPP---QLPA----RNPSSGGHPPLPVPSR 90
+PS L+ P S PS PP P P S SP +LPA P S PP P P+
Sbjct: 20 KPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAA 79
Query: 91 QTWGGLPVACASCWVSSERNPSGTEARGTLVFTMNIGMMAEGPGDPRR-GTDARAAAAAE 149
G VA S + S +RG +G + PG RR G R+AA A
Sbjct: 80 PHVLGARVAAGPTHRLSASH-SRVSSRGP------VGTKPKRPGQGRRAGARMRSAAPAS 132
Query: 150 LRA 152
RA
Sbjct: 133 PRA 135
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 42.0 bits (97), Expect = 2e-04
Identities = 42/123 (34%), Positives = 51/123 (41%), Gaps = 15/123 (12%)
Query: 38 RPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPP---QLPA----RNPSSGGHPPLPVPSR 90
+PS L+ P S PS PP P P S SP +LPA P S PP P P+
Sbjct: 20 KPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAA 79
Query: 91 QTWGGLPVACASCWVSSERNPSGTEARGTLVFTMNIGMMAEGPGDPRR-GTDARAAAAAE 149
G VA S + S +RG +G + PG RR G R+AA A
Sbjct: 80 PHVLGARVAAGPTHRLSASH-SRVSSRGP------VGTKPKRPGQGRRAGARMRSAAPAS 132
Query: 150 LRA 152
RA
Sbjct: 133 PRA 135
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 42.0 bits (97), Expect = 2e-04
Identities = 19/33 (57%), Positives = 19/33 (57%)
Query: 56 PPPAPPPSSVQESPPQLPARNPSSGGHPPLPVP 88
PPP PPP SPP L A PSS PPLP P
Sbjct: 1472 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 1504
Score = 33.1 bits (74), Expect = 0.094
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSG--GHPPLPVP 88
P LV P S+ P PPP PPP+ PP PA P + P P P
Sbjct: 1485 PPPLVAPTPSSPPPPPLPPP-PPPAMPSPPPPPPPAAAPLAAPPEEPAAPSP 1535
Score = 32.0 bits (71), Expect = 0.21
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 55 RPPPAPPPSSV--QESPPQLPARNPSSGGHPPLPVPS 89
+PPP PPP+ + PP P P+ PPL P+
Sbjct: 1456 KPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPT 1492
Score = 30.4 bits (67), Expect = 0.61
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 29 YCEERARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGG------H 82
YC RA A GP T G PP P S+V P L P
Sbjct: 993 YCPGRASGA------GPETPGLGLDPNKPPELP-STVNAEPLGLIQSGPHQAAPPPPPPP 1045
Query: 83 PPLPVPSRQTWGGL--PVACAS 102
PP P P+ + GGL P+ C++
Sbjct: 1046 PPPPAPASEPKGGLTSPIFCST 1067
Score = 30.4 bits (67), Expect = 0.61
Identities = 16/48 (33%), Positives = 19/48 (39%)
Query: 44 GPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQ 91
GP PS P P ++E PP P P+ PP P P Q
Sbjct: 1432 GPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQ 1479
Score = 30.0 bits (66), Expect = 0.79
Identities = 38/145 (26%), Positives = 51/145 (35%), Gaps = 42/145 (28%)
Query: 7 SAHGSLEPPKAMSWSGTTC------TAMYCEERARSA-----------RPSDLVGPRT-- 47
+A G+ PP S + C A Y +A A +P L+GP+
Sbjct: 399 AAGGATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYG 458
Query: 48 ---------------STSGPSHRPPPAPPPSSV----QESPPQLPARNPSSGGHP-PLPV 87
S SG +PP PPP + SP QL + G P P P
Sbjct: 459 QGFGGGQAQDLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPA 518
Query: 88 PSRQTWGGLPVACASCWVSSERNPS 112
Q GLP A S S+ +P+
Sbjct: 519 AHSQ---GLPTASPSLSYSTGHSPA 540
Score = 30.0 bits (66), Expect = 0.79
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 12/56 (21%)
Query: 45 PRTSTSGPSHRPPPAPP------------PSSVQESPPQLPARNPSSGGHPPLPVP 88
P T P PPP PP P+ PP LP P + PP P P
Sbjct: 1462 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 1517
Score = 29.6 bits (65), Expect = 1.0
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 42 LVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVP 88
L+ P T P PP PPP P QL A S G P P P
Sbjct: 823 LLEPATRDGAPQ---PPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSP 866
Score = 28.1 bits (61), Expect = 3.0
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 12/48 (25%)
Query: 50 SGPSHRP-------PPAPPPSSVQESPPQLPAR--NPSSGGHPPLPVP 88
SG H P PP PP SV PP +PAR P P +P P
Sbjct: 1291 SGKRHPPLYQAGLTPPLSPPKSV---PPSVPARGLQPQPPATPAVPHP 1335
Score = 27.3 bits (59), Expect = 5.1
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 35 RSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
RS + + V S++ P P P P P + +++ + P P P P +
Sbjct: 1676 RSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEK 1731
>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 40.8 bits (94), Expect = 4e-04
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 48 STSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGG-LPVACASCWVS 106
S P+ P PAP PSS P + R PSS P P PS G P A AS S
Sbjct: 74 SNERPAEEPTPAPMPSSAPRGPTEPALRRPSSADRPLAPGPSSSPGAGRAPGAMASPSGS 133
Query: 107 SER--NPSGTEAR 117
S+ P G + R
Sbjct: 134 SKATGKPRGRDGR 146
>gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 364
Score = 40.8 bits (94), Expect = 4e-04
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 48 STSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGG-LPVACASCWVS 106
S P+ P PAP PSS P + R PSS P P PS G P A AS S
Sbjct: 177 SNERPAEEPTPAPMPSSAPRGPTEPALRRPSSADRPLAPGPSSSPGAGRAPGAMASPSGS 236
Query: 107 SER--NPSGTEAR 117
S+ P G + R
Sbjct: 237 SKATGKPRGRDGR 249
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 38 RPSDLVGPRTSTSGPSHRPPPAPPPSSVQESP--PQLPARNPSSGGHPPLPVPSRQTWGG 95
RP+ V P + GP P P S P P PA + S G P+P S W
Sbjct: 302 RPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKP 361
Query: 96 LPVACASCWVSSERNPS 112
P ++ W SS +PS
Sbjct: 362 TPSVSSASWKSSSVSPS 378
Score = 27.7 bits (60), Expect = 3.9
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPP-PSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLP 97
PS P + S + P P P PS E PA +P P P S +W P
Sbjct: 259 PSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEP--RRPAPAVSPGSWKPGP 316
Query: 98 VACASCWVSSERNPSG 113
W S+ SG
Sbjct: 317 PGSPRPWKSNPSASSG 332
Score = 26.9 bits (58), Expect = 6.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 35 RSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWG 94
+ A+P+ V P PS P P P SV + + + +PSS PP S ++W
Sbjct: 335 KPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPP---ASPESWK 391
Query: 95 GLP 97
P
Sbjct: 392 SGP 394
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 39.7 bits (91), Expect = 0.001
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 52 PSHRPPPAPPPSSVQESPPQLPARNPSSG------GHPPLPVPSRQTWGGLP 97
P H+PPP P V E PP+ P P +G HPP P R+ G P
Sbjct: 1329 PVHQPPPPPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAP 1380
Score = 34.7 bits (78), Expect = 0.032
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 56 PPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSGTE 115
PPPA P+ PPQ P R S PLP A AS +S R P+ T
Sbjct: 844 PPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTP 903
Query: 116 ARGTLVFTMNIG 127
+ L F + G
Sbjct: 904 SDFQLQFPPSQG 915
Score = 31.6 bits (70), Expect = 0.27
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 45 PRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCW 104
P+TSTS P P +SV S Q P+ P++ H P P P T GLP
Sbjct: 983 PQTSTS----LGPLTSPAASVLVSG-QAPSGTPTAPSHAPAPAPMAAT--GLPPLL---- 1031
Query: 105 VSSERNPSGTEARGTLVFTMNIGMMA-EGPGDP 136
P+ +A + + T+N+ A GPG P
Sbjct: 1032 ------PAENKAFASNLPTLNVAKAASSGPGKP 1058
Score = 29.3 bits (64), Expect = 1.4
Identities = 26/100 (26%), Positives = 35/100 (35%), Gaps = 19/100 (19%)
Query: 7 SAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGP-------SHRPPPA 59
SA L P + T A + +P+ P ST P + +PP A
Sbjct: 591 SAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQA 650
Query: 60 PPPSSVQESPPQLPARNPSSG----------GHPPLPVPS 89
P P + +PPQ PS G G PP P+
Sbjct: 651 PTPQAA--APPQATTPQPSPGLASSPEKIVLGQPPSATPT 688
Score = 28.5 bits (62), Expect = 2.3
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 33 RARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESP----PQLPARNPSSGGHPPLPVP 88
+A ++ S P+ + P P P+ PS ++P P LP+ +P+ PP P
Sbjct: 748 QAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPT---RPPSRPP 804
Query: 89 SR 90
SR
Sbjct: 805 SR 806
Score = 28.1 bits (61), Expect = 3.0
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 36 SARPSDLVGPRTSTSGPSHRPPPAPP--PSSVQESPPQLPARNPSSGGHPPLPVP 88
+A P GP +S S P P P PS PP P P S PP P
Sbjct: 764 AAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPP 818
>gi|6912246 CD3E antigen, epsilon polypeptide associated protein
[Homo sapiens]
Length = 510
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 6 QSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAPPPSSV 65
Q+ +L P + G TC + A L GP+ S SG +P PA PP +
Sbjct: 88 QAGEATLLAPSTEAGGGLTCAS------APQGTLRILEGPQQSLSGSPLQPIPASPPPQI 141
Query: 66 QESPPQLPARNPSSGGHPPLPVP 88
PP L R + GG+PP+ P
Sbjct: 142 ---PPGLRPRFCAFGGNPPVTGP 161
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 38.9 bits (89), Expect = 0.002
Identities = 32/87 (36%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 14 PPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPS-HRPPPAPPPSSVQESPPQL 72
PP+ S T A + ARP LVGP S RPPP P P++ PP
Sbjct: 720 PPQVTSAIATLQQAAAMSFCPQVARP--LVGPLALGSPRLVRRPPPGPAPAAASPGPPP- 776
Query: 73 PARNPSSGGHPPLPVPSRQTWGGLPVA 99
PA P + P P S +GGLP A
Sbjct: 777 PASPPGAPASPRAPRTS--PYGGLPAA 801
Score = 38.1 bits (87), Expect = 0.003
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 31 EERARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVP 88
+ R RP + G +T P PPP P P Q PP PA P G PP P
Sbjct: 2 DARGGGGRPGESPG---ATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPP 56
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQ--LPARNPSSG---GHPPLPVPSRQTW 93
P L P G +PPP PPP PP +P R P G GHP P+P
Sbjct: 316 PHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPG-PMPPHGMR 374
Query: 94 GGLPVACASCWVSSERNPSGTEARGTL 120
G P+ + R P RG L
Sbjct: 375 GPPPLMPPHGYTGPPRPPPYGYQRGPL 401
Score = 30.0 bits (66), Expect = 0.79
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 52 PSHRPPPAPPPSSVQES-PPQL--PARNPSSGGHPPLPVPSRQTWG 94
P PPP PPP ++ PP + P P + GH P PS T G
Sbjct: 240 PGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGP---PSAGTPG 282
Score = 29.3 bits (64), Expect = 1.4
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 7/65 (10%)
Query: 52 PSHRPPPAPPPSSVQESPPQL---PARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSE 108
P PPP PP + PP A +P G P P P GG+P S +
Sbjct: 258 PPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPP----GGMPHPGMSQMQLAH 313
Query: 109 RNPSG 113
P G
Sbjct: 314 HGPHG 318
Score = 28.9 bits (63), Expect = 1.8
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 7/65 (10%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPL----PVPSRQTWG 94
P P S+ G PP PPP S PP +P G PP P+P
Sbjct: 217 PPSAPNPVVSSLGSGLPPPGMPPPGSF---PPPVPPPGALPPGIPPAMPPPPMPPGAAGH 273
Query: 95 GLPVA 99
G P A
Sbjct: 274 GPPSA 278
Score = 28.1 bits (61), Expect = 3.0
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLP 97
P + GP + PP PPP Q P P P PP+P P G LP
Sbjct: 370 PHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTP----RPPVP-PRGPLRGPLP 423
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 38.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 52 PSHRPPPAPPPSSVQESPPQLPARNPSS------GGHPPLPVP 88
P PPP PPPSS PP P P+S GG PP P P
Sbjct: 683 PPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPP 725
Score = 33.9 bits (76), Expect = 0.055
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 25/91 (27%)
Query: 9 HGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSG-----------PSHRPP 57
H +L+P + M+ + +++A P+ + P SG P P
Sbjct: 628 HAALQPMEGMASN---------QQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGP 678
Query: 58 PAPPPSSVQESPPQLPARNPSSGGHPPLPVP 88
P PPP PP P PSS G PP P P
Sbjct: 679 PLPPPP-----PPPPPLPPPSSAGPPPPPPP 704
Score = 28.9 bits (63), Expect = 1.8
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 23/80 (28%)
Query: 30 CEERARSARPSDLVGPRTSTSGPSHRPPP-----------------------APPPSSVQ 66
CE +++ R + LV + + S S PP PPP +
Sbjct: 593 CESESKTTRSNQLVPKKLNISSLSQLSPPNDHKDIHAALQPMEGMASNQQKALPPPPASI 652
Query: 67 ESPPQLPARNPSSGGHPPLP 86
PP LP+ S PP+P
Sbjct: 653 PPPPPLPSGLGSLSPAPPMP 672
Score = 26.6 bits (57), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 56 PPPAPPPSSVQESPP 70
PPPAPPP + PP
Sbjct: 719 PPPAPPPPGLAPPPP 733
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 38.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 43 VGPRTSTSGPSHRPPPAPPPSSVQESPPQL-PARNPSSGGHPPLPVPSRQ 91
+GP SGP PP PP Q+ PPQ P + P PP P P +Q
Sbjct: 47 MGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQ 96
Score = 37.7 bits (86), Expect = 0.004
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 45 PRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLP 86
P TS P PPP PP S V +PPQ +GG PP P
Sbjct: 154 PPAVTSAPPGAPPPTPPSSGVPTTPPQ-------AGGPPPPP 188
Score = 35.4 bits (80), Expect = 0.019
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 45 PRTSTSGPSHRPPPAP-PPSSVQESPPQLPARNPSSGGHPPLP 86
P TS + P P P P PP +V +PP P P S G P P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTP 178
Score = 31.2 bits (69), Expect = 0.36
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 11/44 (25%)
Query: 52 PSHRPPPAPPPSSVQESPP-----------QLPARNPSSGGHPP 84
P H+PPP P P Q+ PP Q P P G PP
Sbjct: 83 PPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPP 126
Score = 29.6 bits (65), Expect = 1.0
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 34 ARSARPSDLVG--PRTSTSGPSHRPPP--APPPSSVQESPPQLPARNPSSGGHPPLPVPS 89
A+ P+ VG P S+S P PP APP S +P PA + G PP PS
Sbjct: 112 AQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPS 171
Score = 28.5 bits (62), Expect = 2.3
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 34 ARSARPSDLVGPRTSTSGPSHRPPPA---PPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
A ++ P P +SG PP A PPP + P P + P GG +P
Sbjct: 156 AVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGG 215
Query: 91 QTWGGLP 97
GG P
Sbjct: 216 PKPGGGP 222
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 23/101 (22%)
Query: 52 PSHRPPPAPPPSSVQ---ESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSE 108
P +PPP PPP+S Q PPQ P R P G P LP S P + S
Sbjct: 381 PQPQPPPPPPPASQQPPPPPPPQAPVRLPPGG--PLLPSASLTRGPQPPPLAVTVPSSLP 438
Query: 109 RNPSGTEARGTLVFTMNIGMMAEGPGDPRRGTDARAAAAAE 149
++P E PG P G D +A A +
Sbjct: 439 QSP------------------PENPGQPSMGIDIASAPALQ 461
Score = 32.0 bits (71), Expect = 0.21
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 33 RARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESP---PQLPARNPSSGGHPP---LP 86
+A S +P P S +PPP PPP + P P LP+ + + G PP +
Sbjct: 373 QAGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVT 432
Query: 87 VPS 89
VPS
Sbjct: 433 VPS 435
Score = 27.3 bits (59), Expect = 5.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 49 TSGPSHRPPPAPPPSSVQESPPQLPARNPSSG 80
T GP P PSS+ +SPP+ P + PS G
Sbjct: 421 TRGPQPPPLAVTVPSSLPQSPPENPGQ-PSMG 451
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 23/101 (22%)
Query: 52 PSHRPPPAPPPSSVQ---ESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSE 108
P +PPP PPP+S Q PPQ P R P G P LP S P + S
Sbjct: 365 PQPQPPPPPPPASQQPPPPPPPQAPVRLPPGG--PLLPSASLTRGPQPPPLAVTVPSSLP 422
Query: 109 RNPSGTEARGTLVFTMNIGMMAEGPGDPRRGTDARAAAAAE 149
++P E PG P G D +A A +
Sbjct: 423 QSP------------------PENPGQPSMGIDIASAPALQ 445
Score = 32.0 bits (71), Expect = 0.21
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 33 RARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESP---PQLPARNPSSGGHPP---LP 86
+A S +P P S +PPP PPP + P P LP+ + + G PP +
Sbjct: 357 QAGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVT 416
Query: 87 VPS 89
VPS
Sbjct: 417 VPS 419
Score = 27.3 bits (59), Expect = 5.1
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 49 TSGPSHRPPPAPPPSSVQESPPQLPARNPSSG 80
T GP P PSS+ +SPP+ P + PS G
Sbjct: 405 TRGPQPPPLAVTVPSSLPQSPPENPGQ-PSMG 435
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 38.1 bits (87), Expect = 0.003
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 13 EPPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTS-GPSHRPPPAP--PPSSVQESP 69
EPP+A G C A R + GP S GP RPPP P PP S + P
Sbjct: 124 EPPEADGGGGYGC-APGLTRGPRGLKREGAPGPAASCMRGPGGRPPPPPDTPPLS-PDGP 181
Query: 70 PQLPARNPSSGGHPPLPVP 88
+LPA P + PP P
Sbjct: 182 ARLPAPGPRASFPPPFGGP 200
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 38.1 bits (87), Expect = 0.003
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 36 SARPSDLVGPRTSTSGPSHRPPP-APPPSSVQESPPQLPARNPSSGGHPPLPVPSRQT 92
S PS+ +G ST+GP + P AP P +V PP +P P H P P P++QT
Sbjct: 1037 SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAV---PPGVPPPGP----HGPSPFPNQQT 1087
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 38.1 bits (87), Expect = 0.003
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 36 SARPSDLVGPRTSTSGPSHRPPP-APPPSSVQESPPQLPARNPSSGGHPPLPVPSRQT 92
S PS+ +G ST+GP + P AP P +V PP +P P H P P P++QT
Sbjct: 1006 SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAV---PPGVPPPGP----HGPSPFPNQQT 1056
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 38.1 bits (87), Expect = 0.003
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 36 SARPSDLVGPRTSTSGPSHRPPP-APPPSSVQESPPQLPARNPSSGGHPPLPVPSRQT 92
S PS+ +G ST+GP + P AP P +V PP +P P H P P P++QT
Sbjct: 1037 SLGPSEQIGQAGSTAGPQQQQPAGAPQPGAV---PPGVPPPGP----HGPSPFPNQQT 1087
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 38.1 bits (87), Expect = 0.003
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 57 PPAPPPSSVQESPPQLPARNPSS-GGHPPLPVPS 89
PP PPP Q Q PA+ PS+ GG PPL PS
Sbjct: 307 PPQPPPQQSQPQQQQAPAQGPSAVGGAPPLHTPS 340
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 37.7 bits (86), Expect = 0.004
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 10 GSLEPPKAMSWS---GTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPP-------PA 59
G PP +WS G + + ++R + PS+ + R S +G PP P
Sbjct: 117 GPPPPPALPTWSVPNGPSPEEVEQQKRQQPG-PSEHIERRVSNAGGPPAPPAGGPPPPPG 175
Query: 60 PPPSSVQESPPQLP------ARNPSSGGHPPL-PVPSRQTWGG 95
PPP PP LP A + + GG PP P+P+ Q GG
Sbjct: 176 PPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGG 218
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPPPS-SVQESPPQLPARNPSSGGHPP-LPVPSRQTWGGL 96
P + P S P+ PPP PPS S PP LP + SS G PP LP PS +
Sbjct: 557 PPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPP 616
Query: 97 PV 98
PV
Sbjct: 617 PV 618
Score = 36.2 bits (82), Expect = 0.011
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLP 97
P L P S++GP PP PPPS +PP + P S PP +P G+P
Sbjct: 588 PPVLPPPSLSSAGP---PPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIP 643
Score = 35.8 bits (81), Expect = 0.014
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 48 STSGPSHRPPPAPPPS-SVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPV 98
+T P PPP PPS PP +P S+G P LP PS + G PV
Sbjct: 553 ATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPV 604
Score = 34.3 bits (77), Expect = 0.042
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 39 PSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQT 92
P + P T P PP PPP PP LPA P G PP+ PS T
Sbjct: 522 PYSQMPPPLPTMPPPVLPPSLPPPVM----PPALPATVPPPGMPPPVMPPSLPT 571
Score = 32.7 bits (73), Expect = 0.12
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 53 SHRPPPAPPPS--SVQESPPQLPARNPSSGGHPP-----LPVPS 89
S+ PPP PPPS S P LP PS PP P PS
Sbjct: 163 SYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPS 206
Score = 32.3 bits (72), Expect = 0.16
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 53 SHRPPPA---PPPSSVQESPPQLPARNPSSGGHPPLPVP 88
S+RPPP PP S V+ S P PAR+ PP+P+P
Sbjct: 1511 SYRPPPPMGKPPGSIVRPSAP--PARSSVPVTRPPVPIP 1547
Score = 32.0 bits (71), Expect = 0.21
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 45 PRTST--SGPSHRPPPAPPPSSVQESPPQLPARNPSS 79
P TS PS PP PPP+ +E PP LP P S
Sbjct: 337 PATSQVPESPSSEEPPLPPPN--EEVPPPLPPEEPQS 371
Score = 30.4 bits (67), Expect = 0.61
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 19 SWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAPPPSS--------VQESPP 70
S+S ++ ++ ++S PS P + G S APPP S VQ+ P
Sbjct: 206 SYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPL 265
Query: 71 QLPARNPSSGGHPPLPVPSRQT 92
+ A+N S+ P P T
Sbjct: 266 ESGAKNKSTEQQQAAPEPDPST 287
Score = 29.6 bits (65), Expect = 1.0
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 14 PPKAMSWSGTTCTAMYCEERARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQL- 72
PP ++S +G + + +A P + P S++ P PP PPP Q PPQL
Sbjct: 592 PPPSLSSAGPP-PVLPPPSLSSTAPPPVMPLPPLSSATP---PPGIPPPGVPQGIPPQLT 647
Query: 73 -----PARNPSSGGHPPLPVPS 89
PA + S P P P+
Sbjct: 648 AAPVPPASSSQSSQVPEKPRPA 669
Score = 28.5 bits (62), Expect = 2.3
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Query: 52 PSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVP 88
P H PPP PP PP +P PP P+P
Sbjct: 78 PHHLPPPPLPP------PPVMPGGGYGDWQPPPPPMP 108
Score = 27.7 bits (60), Expect = 3.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Query: 51 GPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPS 89
G SH PPP PP P P SS P P S
Sbjct: 10 GSSHYPPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSS 48
Score = 27.3 bits (59), Expect = 5.1
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 17/56 (30%)
Query: 38 RPSDLVGPRTSTSGPSHRPP-PAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQT 92
RPS P +S P RPP P PPP PP LP PP PV QT
Sbjct: 1527 RPS---APPARSSVPVTRPPVPIPPPPP----PPPLP---------PPPPVIKPQT 1566
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 37.4 bits (85), Expect = 0.005
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 45 PRTSTSGPSHRPPPAPPPSSVQESPPQLPARNP 77
P + GP H PPP PP + ++PP +P R P
Sbjct: 1192 PTGAFDGPLHSPPPPPPRDPLPDTPPPVPLRPP 1224
Score = 29.6 bits (65), Expect = 1.0
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 14/62 (22%)
Query: 40 SDLVGPRTSTSGPSHRPPPAPPPSSVQ--------------ESPPQLPARNPSSGGHPPL 85
S+ G S P PP PPP V+ SPP P R+P PP+
Sbjct: 1160 SNSKGNMKSDDDPPAIPPRQPPPPKVKPRVPVPTGAFDGPLHSPPPPPPRDPLPDTPPPV 1219
Query: 86 PV 87
P+
Sbjct: 1220 PL 1221
Score = 28.5 bits (62), Expect = 2.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 57 PPAPPPSSVQESPPQLPARNPSSG----GHPPL 85
PPAPP Q S P LP P + HPPL
Sbjct: 1287 PPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPL 1319
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 37.4 bits (85), Expect = 0.005
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 45 PRTSTSGPSHRPP------PAPPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
P S GP PP P PPP+ + +PP P+R P++ PP P PSR
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAA--PPPPPPSR 329
Score = 33.9 bits (76), Expect = 0.055
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 33 RARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPS 89
RA +A P P S PS PP PP PP LP+ PS PP P PS
Sbjct: 316 RAPTAAP-----PPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSG---PPPPPPS 364
Score = 30.8 bits (68), Expect = 0.46
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 45 PRTSTSGPSHRPPPAPPPSSV-QESPPQLPARNPSSGGHPPLPVPS 89
P +S PS PPP P V +PP P P G PP +PS
Sbjct: 348 PALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPS 393
Score = 30.0 bits (66), Expect = 0.79
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 36 SARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGH 82
S+ PS P S G PP PPP PP P PS G H
Sbjct: 352 SSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGL-PSDGDH 397
Score = 29.6 bits (65), Expect = 1.0
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 57 PPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
PP PPPS PP P P + G PP P R
Sbjct: 277 PPPPPPSRGGPPPPPPP---PHNSGPPPPPARGR 307
Score = 29.6 bits (65), Expect = 1.0
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 45 PRTSTSGPSHRP------PPAPPPSSVQESPPQLPARNPSSGGHPPLP 86
P SGP P PP PP + +PP P PS PP P
Sbjct: 292 PPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPP 339
Score = 26.9 bits (58), Expect = 6.7
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 14/70 (20%)
Query: 37 ARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGG---------HPPLPV 87
+RPS V P P +R P PPP+ +P P PS G PP P
Sbjct: 328 SRPSVAVPPP-----PPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPP 382
Query: 88 PSRQTWGGLP 97
P GLP
Sbjct: 383 PGPPPPPGLP 392
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 37.0 bits (84), Expect = 0.006
Identities = 27/68 (39%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 39 PSDLVGPRTSTSG---------PSHRPPPAPPPSSVQ-ESPPQLPARNPSSGGHPPLPVP 88
P DL+ R SG PS PPP P S V P Q P R P G P LP P
Sbjct: 639 PGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSP 698
Query: 89 SRQTWGGL 96
Q G L
Sbjct: 699 GLQFGGSL 706
Score = 27.7 bits (60), Expect = 3.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 32 ERARSARPSDL-VGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLP 86
ER AR + + P + P +PP PP Q+ P Q P + P PP P
Sbjct: 315 ERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQP-----PPPP 365
Score = 26.6 bits (57), Expect = 8.8
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 42 LVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
L+ P P + PP PP PP L R S P LP P +
Sbjct: 337 LMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSC--PPALPRPQQ 383
>gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens]
Length = 981
Score = 37.0 bits (84), Expect = 0.006
Identities = 39/144 (27%), Positives = 54/144 (37%), Gaps = 32/144 (22%)
Query: 4 RLQSAHGSLEPPKAMSWSGTTCTAMYCEERARSARPSDLV-GPRTSTSGP---------S 53
R +S G+L+P +A W G R +S P+ V P TS G
Sbjct: 380 RTESPMGALQPDEAEEWPG----------RPQSHPPAPPVQAPSTSRRGLIRVTTQRALG 429
Query: 54 HRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVACASCWVSSERNPSG 113
PPP P SS+ +P P P++ PPL WG L + W E + G
Sbjct: 430 QPPPPEPTASSMASAPASSP---PANATAPPL------RWGPLRRVLSFSW---ELHVYG 477
Query: 114 TEARGTLVFTMNIGMMAEGPGDPR 137
L + + +A P PR
Sbjct: 478 VGVLFLLPALLALAALAAAPAGPR 501
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,970,156
Number of Sequences: 37866
Number of extensions: 603602
Number of successful extensions: 12498
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 947
Number of HSP's that attempted gapping in prelim test: 6080
Number of HSP's gapped (non-prelim): 5288
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.