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Search of human proteins with 239746626
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746626 PREDICTED: similar to KIAA0466 protein [Homo
sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746626 PREDICTED: similar to KIAA0466 protein [Homo sapiens] 325 1e-89
gi|169215606 PREDICTED: similar to immunoglobulin superfamily, m... 317 3e-87
gi|55953133 immunoglobulin superfamily, member 3 isoform 1 [Homo... 240 4e-64
gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo... 240 4e-64
gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens] 173 5e-44
gi|16445029 immunoglobulin superfamily, member 8 [Homo sapiens] 134 3e-32
gi|41152506 prostaglandin F2 receptor negative regulator [Homo s... 87 7e-18
gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo ... 38 0.004
gi|239753216 PREDICTED: similar to immunoglobulin superfamily, m... 34 0.058
gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens] 33 0.075
gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens] 33 0.075
gi|118572606 hemicentin 1 [Homo sapiens] 33 0.13
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 32 0.22
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 32 0.22
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap... 32 0.22
gi|110349719 titin isoform N2-A [Homo sapiens] 31 0.37
gi|238624149 neuroplastin isoform d precursor [Homo sapiens] 31 0.49
gi|238624147 neuroplastin isoform c precursor [Homo sapiens] 31 0.49
gi|9257240 neuroplastin isoform a precursor [Homo sapiens] 31 0.49
gi|6912646 neuroplastin isoform b precursor [Homo sapiens] 31 0.49
gi|28372555 sodium channel, voltage-gated, type IV, beta isoform... 31 0.49
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 31 0.49
gi|144226847 obscurin-like 1 [Homo sapiens] 30 0.64
gi|28373117 contactin 1 isoform 1 precursor [Homo sapiens] 30 0.83
gi|28373119 contactin 1 isoform 2 precursor [Homo sapiens] 30 0.83
gi|4502499 cholesterol 25-hydroxylase [Homo sapiens] 30 1.1
gi|7661534 CD274 molecule [Homo sapiens] 29 1.4
gi|110349717 titin isoform novex-2 [Homo sapiens] 29 1.9
gi|110349713 titin isoform novex-1 [Homo sapiens] 29 1.9
gi|110349715 titin isoform N2-B [Homo sapiens] 29 1.9
>gi|239746626 PREDICTED: similar to KIAA0466 protein [Homo sapiens]
Length = 155
Score = 325 bits (833), Expect = 1e-89
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MRPVLGEDPDLAIFQWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSH 60
MRPVLGEDPDLAIFQWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSH
Sbjct: 1 MRPVLGEDPDLAIFQWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSH 60
Query: 61 ITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIER 120
ITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIER
Sbjct: 61 ITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIER 120
Query: 121 VQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
VQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS
Sbjct: 121 VQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
>gi|169215606 PREDICTED: similar to immunoglobulin superfamily,
member 3 [Homo sapiens]
Length = 195
Score = 317 bits (811), Expect = 3e-87
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 4 VLGEDPDLAIFQWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITI 63
VLGEDPDLAIFQWHLFHHEFLRQSDGATL QNNHSVVSAQRQVTVQEGPLYRTEGSHITI
Sbjct: 44 VLGEDPDLAIFQWHLFHHEFLRQSDGATLFQNNHSVVSAQRQVTVQEGPLYRTEGSHITI 103
Query: 64 WCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQG 123
WCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQG
Sbjct: 104 WCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQG 163
Query: 124 NPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
NPTLLHITDLQARDAGEYECHTPSTEKQYFGS
Sbjct: 164 NPTLLHITDLQARDAGEYECHTPSTEKQYFGS 195
>gi|55953133 immunoglobulin superfamily, member 3 isoform 1 [Homo
sapiens]
Length = 1214
Score = 240 bits (612), Expect = 4e-64
Identities = 115/117 (98%), Positives = 116/117 (99%)
Query: 39 VVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTM 98
VVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTM
Sbjct: 16 VVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTM 75
Query: 99 DSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
DSSFPYAIYTQRVRGGKIFIERVQGN TLLHITDLQARDAGEYECHTPST+KQYFGS
Sbjct: 76 DSSFPYAIYTQRVRGGKIFIERVQGNSTLLHITDLQARDAGEYECHTPSTDKQYFGS 132
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 45 QVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQ--WSIYLPSSPEREVQIVSTMDSSF 102
QV+ + L E I + C+V Q +F W ++ PS + ++ + +T +S+F
Sbjct: 701 QVSKSKRTLTLVENKPIQLNCSVKS-QTSQNSHFAVLWYVHKPSDADGKLILKTTHNSAF 759
Query: 103 PYAIYTQR--VRGGKIFIERVQGNPTLLHITDLQARDAGEYECH 144
Y Y + +R F V G L + + D+G Y CH
Sbjct: 760 EYGTYAEEEGLRARLQFERHVSGGLFSLTVQRAEVSDSGSYYCH 803
Score = 37.4 bits (85), Expect = 0.005
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 40 VSAQRQVTVQE-----------GPLYRTEGSHITIWCNVSGYQGPSEQNF-QWSIYLPSS 87
VS + +VTV++ G L E + + C V + Q +W ++ P+
Sbjct: 822 VSGRTEVTVKQPDSRLRLSQAQGNLSVLETRQVQLECVVLNRTSITSQLMVEWFVWKPNH 881
Query: 88 PEREVQIVSTMDSSFPYAIYTQRVR-GGKIFIERVQGNPTLLHITDLQARDAGEYECH 144
PERE + D++F Y + G++ +E L I ++ +D+G Y CH
Sbjct: 882 PERETVARLSRDATFHYGEQAAKNNLKGRLHLESPSPGVYRLFIQNVAVQDSGTYSCH 939
Score = 33.1 bits (74), Expect = 0.098
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 20 HHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQ-NF 78
HH+ L Q ++++ SV A + EG + C+V P + +
Sbjct: 418 HHQLLSQGH----LESSISVEVASNASVI-------LEGEDLRFSCSVRTAGRPQGRFSV 466
Query: 79 QWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDA 138
W + + + + + P + Y +R G + +E+VQ N L I + + D
Sbjct: 467 IWQLVDRQNRRSNIMWLDRDGTVQPGSSYWERSSFGGVQMEQVQPNSFSLGIFNSRKEDE 526
Query: 139 GEYECH 144
G+YECH
Sbjct: 527 GQYECH 532
Score = 29.6 bits (65), Expect = 1.1
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 25 RQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYL 84
+Q G+ + N V+ Q T L+R E + + C V+ + + +
Sbjct: 127 KQYFGSYSAKMNLVVIPDSLQTTAMPQTLHRVEQDPLELTCEVAS-ETIQHSHLSVAWLR 185
Query: 85 PSSPEREVQIVSTMDSSFPYAI--YTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYE 142
E+ V+++S ++ Y QR G++ ++++ L I LQ D GE+
Sbjct: 186 QKVGEKPVEVISLSRDFMLHSSSEYAQRQSLGEVRLDKLGRTTFRLTIFHLQPSDQGEFY 245
Query: 143 C 143
C
Sbjct: 246 C 246
Score = 28.9 bits (63), Expect = 1.9
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 114 GKIFIERVQGNPTLLHITDLQA--RDAGEYECHT----PSTEKQYF 153
G++ +R+ +P L +T LQA +D G Y CH PS +K+++
Sbjct: 1071 GRLRFQRL--SPVLYRLTVLQASPQDTGNYSCHVEEWLPSPQKEWY 1114
>gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo
sapiens]
Length = 1194
Score = 240 bits (612), Expect = 4e-64
Identities = 115/117 (98%), Positives = 116/117 (99%)
Query: 39 VVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTM 98
VVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTM
Sbjct: 16 VVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTM 75
Query: 99 DSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
DSSFPYAIYTQRVRGGKIFIERVQGN TLLHITDLQARDAGEYECHTPST+KQYFGS
Sbjct: 76 DSSFPYAIYTQRVRGGKIFIERVQGNSTLLHITDLQARDAGEYECHTPSTDKQYFGS 132
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 45 QVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQ--WSIYLPSSPEREVQIVSTMDSSF 102
QV+ + L E I + C+V Q +F W ++ PS + ++ + +T +S+F
Sbjct: 681 QVSKSKRTLTLVENKPIQLNCSVKS-QTSQNSHFAVLWYVHKPSDADGKLILKTTHNSAF 739
Query: 103 PYAIYTQR--VRGGKIFIERVQGNPTLLHITDLQARDAGEYECH 144
Y Y + +R F V G L + + D+G Y CH
Sbjct: 740 EYGTYAEEEGLRARLQFERHVSGGLFSLTVQRAEVSDSGSYYCH 783
Score = 37.4 bits (85), Expect = 0.005
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 40 VSAQRQVTVQE-----------GPLYRTEGSHITIWCNVSGYQGPSEQNF-QWSIYLPSS 87
VS + +VTV++ G L E + + C V + Q +W ++ P+
Sbjct: 802 VSGRTEVTVKQPDSRLRLSQAQGNLSVLETRQVQLECVVLNRTSITSQLMVEWFVWKPNH 861
Query: 88 PEREVQIVSTMDSSFPYAIYTQRVR-GGKIFIERVQGNPTLLHITDLQARDAGEYECH 144
PERE + D++F Y + G++ +E L I ++ +D+G Y CH
Sbjct: 862 PERETVARLSRDATFHYGEQAAKNNLKGRLHLESPSPGVYRLFIQNVAVQDSGTYSCH 919
Score = 32.7 bits (73), Expect = 0.13
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 103 PYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECH 144
P + Y +R G + +E+VQ N L I + + D G+YECH
Sbjct: 471 PGSSYWERSSFGGVQMEQVQPNSFSLGIFNSRKEDEGQYECH 512
Score = 29.6 bits (65), Expect = 1.1
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 25 RQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYL 84
+Q G+ + N V+ Q T L+R E + + C V+ + + +
Sbjct: 127 KQYFGSYSAKMNLVVIPDSLQTTAMPQTLHRVEQDPLELTCEVAS-ETIQHSHLSVAWLR 185
Query: 85 PSSPEREVQIVSTMDSSFPYAI--YTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYE 142
E+ V+++S ++ Y QR G++ ++++ L I LQ D GE+
Sbjct: 186 QKVGEKPVEVISLSRDFMLHSSSEYAQRQSLGEVRLDKLGRTTFRLTIFHLQPSDQGEFY 245
Query: 143 C 143
C
Sbjct: 246 C 246
Score = 28.9 bits (63), Expect = 1.9
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 114 GKIFIERVQGNPTLLHITDLQA--RDAGEYECHT----PSTEKQYF 153
G++ +R+ +P L +T LQA +D G Y CH PS +K+++
Sbjct: 1051 GRLRFQRL--SPVLYRLTVLQASPQDTGNYSCHVEEWLPSPQKEWY 1094
>gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens]
Length = 1021
Score = 173 bits (439), Expect = 5e-44
Identities = 74/113 (65%), Positives = 100/113 (88%)
Query: 43 QRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSF 102
QR+VTVQ+GPL+R EG ++I CNV+G+QGPSEQ+FQWS+YLP++P +EVQI+ST D++F
Sbjct: 21 QREVTVQKGPLFRAEGYPVSIGCNVTGHQGPSEQHFQWSVYLPTNPTQEVQIISTKDAAF 80
Query: 103 PYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
YA+YTQRVR G +++ERVQGN LLHI+ LQ +DAGEYECHTP+T+++Y+GS
Sbjct: 81 SYAVYTQRVRSGDVYVERVQGNSVLLHISKLQMKDAGEYECHTPNTDEKYYGS 133
Score = 28.5 bits (62), Expect = 2.4
Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 3/118 (2%)
Query: 29 GATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGP-SEQNFQWSIYLPSS 87
G+ + N V+ T+ L + EG + + C S + + W +
Sbjct: 132 GSYSAKTNLIVIPDTLSATMSSQTLGKEEGEPLALTCEASKATAQHTHLSVTWYLTQDGG 191
Query: 88 PEREVQIVSTMDSSF--PYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
+ +I+S P +YT+R + + ++ L I LQ+ D G+ C
Sbjct: 192 GSQATEIISLSKDFILVPGPLYTERFAASDVQLNKLGPTTFRLSIERLQSSDQGQLFC 249
>gi|16445029 immunoglobulin superfamily, member 8 [Homo sapiens]
Length = 613
Score = 134 bits (337), Expect = 3e-32
Identities = 58/112 (51%), Positives = 84/112 (75%)
Query: 44 RQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFP 103
R+V V EGPLYR G+ ++I CNV+GY+GP++QNF+W +Y P +P+ + IVST D+ F
Sbjct: 28 REVLVPEGPLYRVAGTAVSISCNVTGYEGPAQQNFEWFLYRPEAPDTALGIVSTKDTQFS 87
Query: 104 YAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
YA++ RV G++ ++R+QG+ +L I LQA+DAG YECHTPST+ +Y GS
Sbjct: 88 YAVFKSRVVAGEVQVQRLQGDAVVLKIARLQAQDAGIYECHTPSTDTRYLGS 139
Score = 35.4 bits (80), Expect = 0.020
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
Query: 16 WHLFHHEFLRQSDG---------ATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCN 66
+H E+++ DG A L + +S+Q VTV G G + + CN
Sbjct: 268 YHCTAAEWIQDPDGSWAQIAEKRAVLAHVDVQTLSSQLAVTVGPGERRIGPGEPLELLCN 327
Query: 67 VSGYQGPSEQNFQWSI---YLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQG 123
VSG P+ ++ +S+ P+ ++V+ +D+ ++ G I +E+V
Sbjct: 328 VSGALPPAGRHAAYSVGWEMAPAGAPGPGRLVAQLDTEGVGSL-GPGYEGRHIAMEKVAS 386
Query: 124 NPTLLHITDLQARDAGEYEC 143
L + + DAG Y C
Sbjct: 387 RTYRLRLEAARPGDAGTYRC 406
>gi|41152506 prostaglandin F2 receptor negative regulator [Homo
sapiens]
Length = 879
Score = 86.7 bits (213), Expect = 7e-18
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 44 RQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFP 103
R V V L R G+ + I CNVS Y GPSEQNF WS S V++ ST + FP
Sbjct: 22 RVVRVPTATLVRVVGTELVIPCNVSDYDGPSEQNFDWSF--SSLGSSFVELASTWEVGFP 79
Query: 104 YAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHTPSTEKQYFGS 155
+Y +R++ G+I + R + LHI ++Q D G Y+C TPST+ G+
Sbjct: 80 AQLYQERLQRGEILLRRTANDAVELHIKNVQPSDQGHYKCSTPSTDATVQGN 131
Score = 26.6 bits (57), Expect = 9.2
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 86 SSPEREVQIVST-MDSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
SSP I+S DS +T R + +E+VQ + + Q DAG Y C
Sbjct: 597 SSPNETKYIISLDQDSVVKLENWTDASRVDGVVLEKVQEDEFRYRMYQTQVSDAGLYRC 655
>gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo
sapiens]
Length = 120
Score = 37.7 bits (86), Expect = 0.004
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 48 VQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIY 107
VQ G + G+ + + C VSGY +E + W + +P + ++ + D IY
Sbjct: 24 VQSGAEVKKPGASVKVSCKVSGYT-LTELSMHW---VRQAPGKGLEWMGGFDPEDGETIY 79
Query: 108 TQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHT 145
Q+ +G E + + ++ L++ D Y C T
Sbjct: 80 AQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCAT 117
>gi|239753216 PREDICTED: similar to immunoglobulin superfamily,
member 3 [Homo sapiens]
Length = 376
Score = 33.9 bits (76), Expect = 0.058
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 57 EGSHITIWCNVSGYQGPSEQ-NFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGK 115
EG + C+V P + + W + + ++ + + P + Y +R G
Sbjct: 257 EGEDLRFSCSVRMAGRPQGRFSVIWQLVDRQNRRSDIMWLDRDGTVQPGSSYWERSSFGS 316
Query: 116 IFIERVQGNPTLLHITDLQARDAGEYECH 144
+ +E+VQ N L I + + D G+YECH
Sbjct: 317 VQMEQVQPNSFSLGIFNSRKEDEGQYECH 345
>gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens]
Length = 120
Score = 33.5 bits (75), Expect = 0.075
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 48 VQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIY 107
VQ G + G+ + I C VSGY ++ W + +P + ++ + +D IY
Sbjct: 24 VQSGAEVKKPGATVKISCKVSGYTF-TDYYMHW---VQQAPGKGLEWMGLVDPEDGETIY 79
Query: 108 TQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHT 145
++ +G + + ++ L++ D Y C T
Sbjct: 80 AEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCAT 117
>gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens]
Length = 120
Score = 33.5 bits (75), Expect = 0.075
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 48 VQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIY 107
VQ G + G+ + I C VSGY ++ W + +P + ++ + +D IY
Sbjct: 24 VQSGAEVKKPGATVKISCKVSGYTF-TDYYMHW---VQQAPGKGLEWMGLVDPEDGETIY 79
Query: 108 TQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYECHT 145
++ +G + + ++ L++ D Y C T
Sbjct: 80 AEKFQGRVTITADTSTDTAYMELSSLRSEDTAVYYCAT 117
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 32.7 bits (73), Expect = 0.13
Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 25/147 (17%)
Query: 28 DGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSS 87
+G + ++ H + A Q+ + G ++ C G ++NF ++Y+P S
Sbjct: 3096 NGRMITESTHVEILADGQMLHIKKAEVSDTGQYV---CRAINVAGRDDKNFHLNVYVPPS 3152
Query: 88 ---PEREVQIVSTMDS--------------SFPYAIYTQRVRGGKIFIERVQGNPTLLHI 130
PEREV IV T+ + + + +R+ R+ + L I
Sbjct: 3153 IEGPEREV-IVETISNPVTLTCDATGIPPPTIAWLKNHKRIENSDSLEVRILSGGSKLQI 3211
Query: 131 TDLQARDAGEYECHTPSTE----KQYF 153
Q D+G Y C + E K YF
Sbjct: 3212 ARSQHSDSGNYTCIASNMEGKAQKYYF 3238
Score = 27.7 bits (60), Expect = 4.1
Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 21/147 (14%)
Query: 23 FLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSI 82
+L+ + N V+S R + + + T G + + N +G + +++ +
Sbjct: 2045 WLKDGSPVSSFSNGLQVLSGGRILALTSAQISDT-GRYTCVAVNAAGEK---QRDIDLRV 2100
Query: 83 YLPSSPEREVQIVSTMDS----------SFPYAIYTQRVRGGKIFIE---RVQGNPTLLH 129
Y+P + E Q VS + S + P T G + + + N ++L
Sbjct: 2101 YVPPNIMGEEQNVSVLISQAVELLCQSDAIPPPTLTWLKDGHPLLKKPGLSISENRSVLK 2160
Query: 130 ITDLQARDAGEYECHTPS----TEKQY 152
I D Q +D G Y C + TEK Y
Sbjct: 2161 IEDAQVQDTGRYTCEATNVAGKTEKNY 2187
>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
sapiens]
Length = 848
Score = 32.0 bits (71), Expect = 0.22
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 31 TLVQNNHSVVSAQRQVTVQEGPL--YRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSP 88
T+ Q++ S+ + +GP+ Y EG+ + I C V Y + F+ LPSS
Sbjct: 390 TIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN 449
Query: 89 EREVQIVSTMDSSF 102
++I +T +S+
Sbjct: 450 YSNIKIYNTPSASY 463
>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
sapiens]
Length = 858
Score = 32.0 bits (71), Expect = 0.22
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 31 TLVQNNHSVVSAQRQVTVQEGPL--YRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSP 88
T+ Q++ S+ + +GP+ Y EG+ + I C V Y + F+ LPSS
Sbjct: 400 TIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN 459
Query: 89 EREVQIVSTMDSSF 102
++I +T +S+
Sbjct: 460 YSNIKIYNTPSASY 473
>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
sapiens]
Length = 761
Score = 32.0 bits (71), Expect = 0.22
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 31 TLVQNNHSVVSAQRQVTVQEGPL--YRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSP 88
T+ Q++ S+ + +GP+ Y EG+ + I C V Y + F+ LPSS
Sbjct: 390 TIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN 449
Query: 89 EREVQIVSTMDSSF 102
++I +T +S+
Sbjct: 450 YSNIKIYNTPSASY 463
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 31.2 bits (69), Expect = 0.37
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 27/104 (25%)
Query: 40 VSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMD 99
V A T + P+ +GS + + C +SG +P EV V
Sbjct: 6454 VKAPPVFTQKPSPVGALKGSDVILQCEISG-----------------TPPFEVVWVKDR- 6495
Query: 100 SSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
++VR K F + T LHI +L+A D GEY C
Sbjct: 6496 ---------KQVRNSKKFKITSKHFDTSLHILNLEASDVGEYHC 6530
Score = 28.9 bits (63), Expect = 1.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 123 GNPTLLHITDLQARDAGEYEC 143
G LHI D+Q DAGEY C
Sbjct: 11170 GKDRKLHIIDVQLSDAGEYTC 11190
Score = 28.5 bits (62), Expect = 2.4
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 37 HSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSS--------- 87
+ +V +R V+++ L + ++ T C VS G + ++ P S
Sbjct: 5283 YRLVCHERSVSLEVNNLELEDTANYT--CKVSNVAGDDACSGILTVKEPPSFLVKPGRQQ 5340
Query: 88 --PEREVQIVSTMDSSFPYAIY-----TQRVRGGKIFIERVQGNPTLLHITDLQARDAGE 140
P+ V+ + + + P+ I + V G K FI ++G+ + L++ + A G+
Sbjct: 5341 AIPDSTVEFKAILKGTPPFKIKWFKDDVELVSGPKCFIG-LEGSTSFLNLYSVDASKTGQ 5399
Query: 141 YECH 144
Y CH
Sbjct: 5400 YTCH 5403
Score = 28.1 bits (61), Expect = 3.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 38 SVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVS 96
++VS + VTV EG +T+ C++SGY P+ ++ + SS + ++ S
Sbjct: 944 TLVSGLKNVTV-------IEGESVTLECHISGYPSPTVTWYREDYQIESSIDFQITFQS 995
Score = 27.7 bits (60), Expect = 4.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 109 QRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
+ +R GK + + T +HI ++ A D GEY+C
Sbjct: 7437 RELRSGKKYKIMSENFLTSIHILNVDAADIGEYQC 7471
Score = 26.9 bits (58), Expect = 7.0
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 86 SSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
S E E ++ T + + +R K + + + LHIT D GEY+C
Sbjct: 4970 SDVELECEVTGTPPFEVTWLKNNREIRSSKKYTLTDRVSVFNLHITKCDPSDTGEYQC 5027
Score = 26.6 bits (57), Expect = 9.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 89 EREVQIVSTMDSSFPYAIYTQR----VRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
E +V +++ + + P+ I + +R G+ + +Q + L I A DAGEY+C
Sbjct: 4407 EYDVMLLAEVAGTPPFEITWFKDNTILRSGRKYKTFIQDHLVSLQILKFVAADAGEYQC 4465
>gi|238624149 neuroplastin isoform d precursor [Homo sapiens]
Length = 278
Score = 30.8 bits (68), Expect = 0.49
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 15 QWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPS 74
++H +H AT+ V A +T + + EG T++C GY P
Sbjct: 99 EYHCVYHFVSAPKANATIE------VKAAPDITGHKRSENKNEGQDATMYCKSVGYPHP- 151
Query: 75 EQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQ 134
W I+ + IV+T G+ FI + N T L+I +LQ
Sbjct: 152 ----DW-IWRKKENGMPMDIVNT---------------SGRFFIINKE-NYTELNIVNLQ 190
Query: 135 -ARDAGEYECH 144
D GEYEC+
Sbjct: 191 ITEDPGEYECN 201
>gi|238624147 neuroplastin isoform c precursor [Homo sapiens]
Length = 394
Score = 30.8 bits (68), Expect = 0.49
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 15 QWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPS 74
++H +H AT+ V A +T + + EG T++C GY P
Sbjct: 215 EYHCVYHFVSAPKANATIE------VKAAPDITGHKRSENKNEGQDATMYCKSVGYPHP- 267
Query: 75 EQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQ 134
W I+ + IV+T G+ FI + N T L+I +LQ
Sbjct: 268 ----DW-IWRKKENGMPMDIVNT---------------SGRFFIINKE-NYTELNIVNLQ 306
Query: 135 -ARDAGEYECH 144
D GEYEC+
Sbjct: 307 ITEDPGEYECN 317
>gi|9257240 neuroplastin isoform a precursor [Homo sapiens]
Length = 282
Score = 30.8 bits (68), Expect = 0.49
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 15 QWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPS 74
++H +H AT+ V A +T + + EG T++C GY P
Sbjct: 99 EYHCVYHFVSAPKANATIE------VKAAPDITGHKRSENKNEGQDATMYCKSVGYPHP- 151
Query: 75 EQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQ 134
W I+ + IV+T G+ FI + N T L+I +LQ
Sbjct: 152 ----DW-IWRKKENGMPMDIVNT---------------SGRFFIINKE-NYTELNIVNLQ 190
Query: 135 -ARDAGEYECH 144
D GEYEC+
Sbjct: 191 ITEDPGEYECN 201
>gi|6912646 neuroplastin isoform b precursor [Homo sapiens]
Length = 398
Score = 30.8 bits (68), Expect = 0.49
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 15 QWHLFHHEFLRQSDGATLVQNNHSVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPS 74
++H +H AT+ V A +T + + EG T++C GY P
Sbjct: 215 EYHCVYHFVSAPKANATIE------VKAAPDITGHKRSENKNEGQDATMYCKSVGYPHP- 267
Query: 75 EQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQGNPTLLHITDLQ 134
W I+ + IV+T G+ FI + N T L+I +LQ
Sbjct: 268 ----DW-IWRKKENGMPMDIVNT---------------SGRFFIINKE-NYTELNIVNLQ 306
Query: 135 -ARDAGEYECH 144
D GEYEC+
Sbjct: 307 ITEDPGEYECN 317
>gi|28372555 sodium channel, voltage-gated, type IV, beta isoform 1
precursor [Homo sapiens]
Length = 228
Score = 30.8 bits (68), Expect = 0.49
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 53 LYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTM--DSSFPYAIYTQR 110
+Y G+ I + C S G + +F+W+ SS ++ I T+ + S P
Sbjct: 41 IYAVNGTEILLPCTFSSCFGFEDLHFRWTYN--SSDAFKILIEGTVKNEKSDPKVTLKDD 98
Query: 111 VRGGKIFIERVQGNPTLLHITDLQARDAGEYECHTPSTEK 150
R + + + N + + DL+ D G+Y CH + ++
Sbjct: 99 DRITLVGSTKEKMNNISIVLRDLEFSDTGKYTCHVKNPKE 138
>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
sapiens]
Length = 387
Score = 30.8 bits (68), Expect = 0.49
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 45 QVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQ-NFQWSIYLPSSPEREVQIVSTMDSSFP 103
QVT+ +G + T GS++T+ C + EQ + QWS + ++E++ +S S
Sbjct: 23 QVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWSFF----HKKEMEPISIYFSQGG 78
Query: 104 YAIYTQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
A+ + + +I GN ++ I+ +Q D+G Y C
Sbjct: 79 QAVAIGQFK-DRITGSNDPGNASIT-ISHMQPADSGIYIC 116
>gi|144226847 obscurin-like 1 [Homo sapiens]
Length = 1896
Score = 30.4 bits (67), Expect = 0.64
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 86 SSPEREVQIVSTMDSSFPYAIYT--QRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
++ ER V FP Y Q+V ++ + ++ G L + + + +D+GE+EC
Sbjct: 729 TTSERVVLTCELSRVDFPATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFEC 788
Query: 144 HTPSTEKQYFG 154
T +FG
Sbjct: 789 RTEGV-SAFFG 798
>gi|28373117 contactin 1 isoform 1 precursor [Homo sapiens]
Length = 1018
Score = 30.0 bits (66), Expect = 0.83
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 28/108 (25%)
Query: 49 QEGPLYRT-EGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIY 107
+E P R EG + + C+ Y P + +++W + E + TMD
Sbjct: 141 EERPEVRVKEGKGMVLLCDPP-YHFPDDLSYRWLL-------NEFPVFITMDK------- 185
Query: 108 TQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC--HTPSTEKQYF 153
+ F+ + GN L+I +++A D G Y C +PS K F
Sbjct: 186 -------RRFVSQTNGN---LYIANVEASDKGNYSCFVSSPSITKSVF 223
>gi|28373119 contactin 1 isoform 2 precursor [Homo sapiens]
Length = 1007
Score = 30.0 bits (66), Expect = 0.83
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 28/108 (25%)
Query: 49 QEGPLYRT-EGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVSTMDSSFPYAIY 107
+E P R EG + + C+ Y P + +++W + E + TMD
Sbjct: 130 EERPEVRVKEGKGMVLLCDPP-YHFPDDLSYRWLL-------NEFPVFITMDK------- 174
Query: 108 TQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC--HTPSTEKQYF 153
+ F+ + GN L+I +++A D G Y C +PS K F
Sbjct: 175 -------RRFVSQTNGN---LYIANVEASDKGNYSCFVSSPSITKSVF 212
>gi|4502499 cholesterol 25-hydroxylase [Homo sapiens]
Length = 272
Score = 29.6 bits (65), Expect = 1.1
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 22/93 (23%)
Query: 10 DLAIFQWHLFHHE--FLRQSDGATLVQNNHSVVSAQRQVTVQE----------------- 50
D+ F WHL HH+ +L ++ QN+ S A + ++V E
Sbjct: 136 DMEFFVWHLLHHKVPWLYRTFHKVHHQNSSSFALATQYMSVWELFSLGFFDMMNVTLLGC 195
Query: 51 GPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIY 83
PL + IW +V + G NF WS +
Sbjct: 196 HPLTTLTFHVVNIWLSVEDHSG---YNFPWSTH 225
>gi|7661534 CD274 molecule [Homo sapiens]
Length = 290
Score = 29.3 bits (64), Expect = 1.4
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 53 LYRTE-GSHITIWCNVSGYQGPSEQNFQWS---IYLPSSPEREVQIV-STMDSSFPYAIY 107
LY E GS++TI C P E+ + +Y + +Q V D ++ Y
Sbjct: 27 LYVVEYGSNMTIECKF-----PVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSY 81
Query: 108 TQRVRGGKIFIERVQGNPTLLHITDLQARDAGEYEC 143
QR R + +++ L ITD++ +DAG Y C
Sbjct: 82 RQRAR---LLKDQLSLGNAALQITDVKLQDAGVYRC 114
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 28.9 bits (63), Expect = 1.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 123 GNPTLLHITDLQARDAGEYEC 143
G LHI D+Q DAGEY C
Sbjct: 4865 GKDRKLHIIDVQLSDAGEYTC 4885
Score = 28.1 bits (61), Expect = 3.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 38 SVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVS 96
++VS + VTV EG +T+ C++SGY P+ ++ + SS + ++ S
Sbjct: 898 TLVSGLKNVTV-------IEGESVTLECHISGYPSPTVTWYREDYQIESSIDFQITFQS 949
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 28.9 bits (63), Expect = 1.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 123 GNPTLLHITDLQARDAGEYEC 143
G LHI D+Q DAGEY C
Sbjct: 4798 GKDRKLHIIDVQLSDAGEYTC 4818
Score = 28.1 bits (61), Expect = 3.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 38 SVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVS 96
++VS + VTV EG +T+ C++SGY P+ ++ + SS + ++ S
Sbjct: 898 TLVSGLKNVTV-------IEGESVTLECHISGYPSPTVTWYREDYQIESSIDFQITFQS 949
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 28.9 bits (63), Expect = 1.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 123 GNPTLLHITDLQARDAGEYEC 143
G LHI D+Q DAGEY C
Sbjct: 4673 GKDRKLHIIDVQLSDAGEYTC 4693
Score = 28.1 bits (61), Expect = 3.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 38 SVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSPEREVQIVS 96
++VS + VTV EG +T+ C++SGY P+ ++ + SS + ++ S
Sbjct: 898 TLVSGLKNVTV-------IEGESVTLECHISGYPSPTVTWYREDYQIESSIDFQITFQS 949
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,376,251
Number of Sequences: 37866
Number of extensions: 264805
Number of successful extensions: 947
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 772
Number of HSP's gapped (non-prelim): 198
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.