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Search of human proteins with 239746471
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo
sapiens]
(362 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo ... 760 0.0
gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens] 755 0.0
gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens] 755 0.0
gi|167555104 interferon regulatory factor 4 [Homo sapiens] 63 5e-10
gi|25282407 interferon-stimulated transcription factor 3, gamma ... 62 6e-10
gi|4504567 interferon regulatory factor 8 [Homo sapiens] 57 2e-08
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 54 2e-07
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 54 2e-07
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens] 54 2e-07
gi|5453700 interferon regulatory factor 6 [Homo sapiens] 47 3e-05
gi|153082752 interferon regulatory factor 2 [Homo sapiens] 47 3e-05
gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] 46 5e-05
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi... 46 6e-05
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi... 46 6e-05
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi... 46 6e-05
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi... 45 1e-04
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi... 45 1e-04
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens] 45 1e-04
gi|4504721 interferon regulatory factor 1 [Homo sapiens] 44 2e-04
gi|4504725 interferon regulatory factor 3 [Homo sapiens] 41 0.002
gi|40807477 retinoic acid induced 1 [Homo sapiens] 39 0.009
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 36 0.061
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 34 0.18
gi|239754993 PREDICTED: hypothetical protein [Homo sapiens] 34 0.23
gi|25777612 proteasome 26S non-ATPase subunit 3 [Homo sapiens] 34 0.23
gi|8659574 transcription factor E3 [Homo sapiens] 33 0.40
gi|40807447 papillary renal cell carcinoma translocation-associa... 33 0.40
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 33 0.40
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 33 0.40
gi|40807450 papillary renal cell carcinoma translocation-associa... 33 0.40
>gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo
sapiens]
Length = 362
Score = 760 bits (1963), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%)
Query: 1 MAEPEVPCASGTGGAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG 60
MAEPEVPCASGTGGAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG
Sbjct: 1 MAEPEVPCASGTGGAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG 60
Query: 61 TNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
TNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS
Sbjct: 61 TNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
Query: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA 180
GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA
Sbjct: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA 180
Query: 181 RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL 240
RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL
Sbjct: 181 RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL 240
Query: 241 NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH 300
NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH
Sbjct: 241 NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH 300
Query: 301 PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC 360
PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC
Sbjct: 301 PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC 360
Query: 361 TR 362
TR
Sbjct: 361 TR 362
>gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 755 bits (1950), Expect = 0.0
Identities = 360/362 (99%), Positives = 360/362 (99%)
Query: 1 MAEPEVPCASGTGGAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG 60
MAEPEVPCASGT GAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG
Sbjct: 1 MAEPEVPCASGTWGAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG 60
Query: 61 TNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
TNKEAPPPGRNDSTLPS RAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS
Sbjct: 61 TNKEAPPPGRNDSTLPSARAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
Query: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA 180
GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA
Sbjct: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA 180
Query: 181 RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL 240
RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL
Sbjct: 181 RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL 240
Query: 241 NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH 300
NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH
Sbjct: 241 NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH 300
Query: 301 PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC 360
PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC
Sbjct: 301 PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC 360
Query: 361 TR 362
TR
Sbjct: 361 TR 362
>gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 755 bits (1950), Expect = 0.0
Identities = 360/362 (99%), Positives = 360/362 (99%)
Query: 1 MAEPEVPCASGTGGAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG 60
MAEPEVPCASGT GAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG
Sbjct: 1 MAEPEVPCASGTWGAQIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQAWMVHKGKHLEG 60
Query: 61 TNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
TNKEAPPPGRNDSTLPS RAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS
Sbjct: 61 TNKEAPPPGRNDSTLPSARAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
Query: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA 180
GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA
Sbjct: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAA 180
Query: 181 RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL 240
RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL
Sbjct: 181 RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQPNKVERRRTCHLL 240
Query: 241 NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH 300
NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH
Sbjct: 241 NTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGPTQH 300
Query: 301 PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC 360
PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC
Sbjct: 301 PKEQLIMADVQVQLRPGSSSCTLSASTERPDGSSTPGNPDGITHLQCSCLHPKRAASSSC 360
Query: 361 TR 362
TR
Sbjct: 361 TR 362
>gi|167555104 interferon regulatory factor 4 [Homo sapiens]
Length = 451
Score = 62.8 bits (151), Expect = 5e-10
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQGY---------QAWMVHKGKHLEGTNKEAP 66
QI+SG Y GL WE+ K++FRIPWKH KQ Y +AW + KGK EG +K P
Sbjct: 31 QIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDP 90
Query: 67 P 67
P
Sbjct: 91 P 91
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 24/85 (28%)
Query: 227 QPNKVERRRTCHLLNTRGFLQAVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQI 286
+PNK+ER +TC L +T+ FL + R P++Q+
Sbjct: 346 RPNKLERDQTCKLFDTQQFLSELQAFAHHGRSL----------------------PRFQV 383
Query: 287 CLCFGEEDPGPTQHPKEQLIMADVQ 311
LCFGEE P P + K LI A V+
Sbjct: 384 TLCFGEEFPDPQRQRK--LITAHVE 406
>gi|25282407 interferon-stimulated transcription factor 3, gamma
48kDa [Homo sapiens]
Length = 393
Score = 62.4 bits (150), Expect = 6e-10
Identities = 90/365 (24%), Positives = 130/365 (35%), Gaps = 98/365 (26%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQGYQ---------AWMVHKGKHLEGTN---- 62
Q+ESG + G+CW+D KT+FRIPWKH KQ ++ AW + KGK+ EG
Sbjct: 19 QVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYKEGDTGGPA 78
Query: 63 ----------------KEAPPPGRND----------------STLPSTRAPPSGLQEPLC 90
KE P GR D S P T+ PS Q
Sbjct: 79 VWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKVPSKRQHSSV 138
Query: 91 TGGNSLGIPEESQAS-----SPTLTASSPNAQD--GSGFATEDEDKEWPHRLAQQGSLLP 143
+ EE A SP++ S N ++ SG A + + S
Sbjct: 139 SSERK----EEEDAMQNCTLSPSVLQDSLNNEEEGASGGAVHSD-------IGSSSSSSS 187
Query: 144 PILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLA----------ARVALLSAALVREA 193
P + T ++ PP + LL A+V L LV E
Sbjct: 188 PEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQSLDCRLVAEP 247
Query: 194 TGRTAQRCRL-----SPRAAAERLLGPPPHVAAGPVLAQ-PNKVERRRTCHLLNTRGFLQ 247
+G + ++ P +RLL + G ++A P + +R C + + Q
Sbjct: 248 SGSESSMEQVLFPKPGPLEPTQRLLS---QLERGILVASNPRGLFVQRLCPIPISWNAPQ 304
Query: 248 AV----------GRLEEWNRVAWERGHKDACRIIVCPPAGWSPDPKYQICLCFGEEDPGP 297
A E R A+ CR +V G P PK+Q+ L F EE G
Sbjct: 305 APPGPGPHLLPSNECVELFRTAY------FCRDLVRYFQGLGPPPKFQVTLNFWEESHGS 358
Query: 298 TQHPK 302
+ P+
Sbjct: 359 SHTPQ 363
>gi|4504567 interferon regulatory factor 8 [Homo sapiens]
Length = 426
Score = 57.4 bits (137), Expect = 2e-08
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQGY---------QAWMVHKGKHLEGTNKE 64
QI+S Y GL WE+ K++FRIPWKH KQ Y +AW V KGK EG E
Sbjct: 17 QIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFKEGDKAE 74
>gi|98985819 interferon regulatory factor 7 isoform d [Homo
sapiens]
Length = 516
Score = 54.3 bits (129), Expect = 2e-07
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG--------YQAWMVHKGKHLEGTNKEAPP 67
+I SGCY GL W D +T FR+PWKH A++ ++AW V +G+ + PP
Sbjct: 34 EISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPP 93
Query: 68 P 68
P
Sbjct: 94 P 94
>gi|4758610 interferon regulatory factor 7 isoform a [Homo
sapiens]
Length = 503
Score = 54.3 bits (129), Expect = 2e-07
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG--------YQAWMVHKGKHLEGTNKEAPP 67
+I SGCY GL W D +T FR+PWKH A++ ++AW V +G+ + PP
Sbjct: 21 EISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPP 80
Query: 68 P 68
P
Sbjct: 81 P 81
>gi|4809284 interferon regulatory factor 7 isoform b [Homo
sapiens]
Length = 474
Score = 54.3 bits (129), Expect = 2e-07
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG--------YQAWMVHKGKHLEGTNKEAPP 67
+I SGCY GL W D +T FR+PWKH A++ ++AW V +G+ + PP
Sbjct: 21 EISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGGPP 80
Query: 68 P 68
P
Sbjct: 81 P 81
>gi|5453700 interferon regulatory factor 6 [Homo sapiens]
Length = 467
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ++SG Y GL W F+IPWKH + ++AW V GK+ EG +
Sbjct: 16 AQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPD 75
Query: 66 P 66
P
Sbjct: 76 P 76
>gi|153082752 interferon regulatory factor 2 [Homo sapiens]
Length = 349
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEAP 66
QI S GL W + K +F+IPW H A+ G ++ W +H GKH G +K P
Sbjct: 15 QINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQPGVDKPDP 74
>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
Length = 504
Score = 46.2 bits (108), Expect = 5e-05
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 43/175 (24%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ+ S Y GL W + K LF IPW+H + G ++AW GK+ EG ++
Sbjct: 23 AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
Query: 66 PPPGR----------NDSTL----PSTRAPPSGLQEPLCTGG-----------NSLGIPE 100
P + D L P P +C+ G S G E
Sbjct: 83 PAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDSQPPEDYSFGAGE 142
Query: 101 ESQAS--------SPTLTASSPNAQDGSGFATEDEDKEWPHRLAQQGSLLPPILL 147
E + S +LT + + + ++ ED +WP L Q +L PP++L
Sbjct: 143 EEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTL-QPPTLQPPVVL 196
>gi|148833515 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 45.8 bits (107), Expect = 6e-05
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ+ S Y GL W + K LF IPW+H + G ++AW GK+ EG ++
Sbjct: 23 AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
Query: 66 PPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPE-----ESQASSPTLTASSPNAQDGS 120
P + + ++ L + G + P+ E ++ P T S P
Sbjct: 83 PAKWKANLRCALNKSRDFRL---IYDGPRDMP-PQPYKIYEVCSNGPAPTDSQPPEDYSF 138
Query: 121 GFATEDEDKE----------------WPHRLAQQGSLLPPILL 147
G E+E++E WP L Q +L PP++L
Sbjct: 139 GAGEEEEEEEELQRMLPSLSLTEDVKWPPTL-QPPTLQPPVVL 180
>gi|148833492 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 45.8 bits (107), Expect = 6e-05
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ+ S Y GL W + K LF IPW+H + G ++AW GK+ EG ++
Sbjct: 23 AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
Query: 66 PPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPE-----ESQASSPTLTASSPNAQDGS 120
P + + ++ L + G + P+ E ++ P T S P
Sbjct: 83 PAKWKANLRCALNKSRDFRL---IYDGPRDMP-PQPYKIYEVCSNGPAPTDSQPPEDYSF 138
Query: 121 GFATEDEDKE----------------WPHRLAQQGSLLPPILL 147
G E+E++E WP L Q +L PP++L
Sbjct: 139 GAGEEEEEEEELQRMLPSLSLTEDVKWPPTL-QPPTLQPPVVL 180
>gi|148833488 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 45.8 bits (107), Expect = 6e-05
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ+ S Y GL W + K LF IPW+H + G ++AW GK+ EG ++
Sbjct: 23 AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
Query: 66 PPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPE-----ESQASSPTLTASSPNAQDGS 120
P + + ++ L + G + P+ E ++ P T S P
Sbjct: 83 PAKWKANLRCALNKSRDFRL---IYDGPRDMP-PQPYKIYEVCSNGPAPTDSQPPEDYSF 138
Query: 121 GFATEDEDKE----------------WPHRLAQQGSLLPPILL 147
G E+E++E WP L Q +L PP++L
Sbjct: 139 GAGEEEEEEEELQRMLPSLSLTEDVKWPPTL-QPPTLQPPVVL 180
>gi|148833496 interferon regulatory factor 5 isoform b [Homo
sapiens]
Length = 498
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ+ S Y GL W + K LF IPW+H + G ++AW GK+ EG ++
Sbjct: 23 AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
Query: 66 P 66
P
Sbjct: 83 P 83
>gi|148833494 interferon regulatory factor 5 isoform d [Homo
sapiens]
Length = 514
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ+ S Y GL W + K LF IPW+H + G ++AW GK+ EG ++
Sbjct: 23 AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
Query: 66 P 66
P
Sbjct: 83 P 83
>gi|14249182 interferon regulatory factor 5 isoform b [Homo
sapiens]
Length = 498
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
AQ+ S Y GL W + K LF IPW+H + G ++AW GK+ EG ++
Sbjct: 23 AQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEAD 82
Query: 66 P 66
P
Sbjct: 83 P 83
>gi|4504721 interferon regulatory factor 1 [Homo sapiens]
Length = 325
Score = 44.3 bits (103), Expect = 2e-04
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Query: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEAP 66
QI S GL W + + +F+IPWKH AK G +++W +H G++ G + P
Sbjct: 15 QINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKAGEKEPDP 74
>gi|4504725 interferon regulatory factor 3 [Homo sapiens]
Length = 427
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG--------YQAWMVHKGKHLEGTNKEAP 66
+Q++ G G+ W + +T FRIPWKH +Q +QAW G ++ G +K
Sbjct: 14 SQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEATGAYVPGRDKPDL 73
Query: 67 P 67
P
Sbjct: 74 P 74
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 38.5 bits (88), Expect = 0.009
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 67 PPGRNDSTLPSTRAPPS---GLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGSGFA 123
PPG L +T APP G Q G +G P ASSP+ A+ P A D S
Sbjct: 1071 PPG-----LTTTPAPPDKLGGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMG 1125
Query: 124 TEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARH-RTSKTSGAQCPPMTSATCLL--AA 180
++ ++ + P + G ++L++ T H + + S + P + LL +
Sbjct: 1126 SKTKETDSP---STPGKDQRSMILRSRTKTQEIFHSKRRRPSEGRLPNCRATKKLLDNSH 1182
Query: 181 RVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPH 218
A + + GR +QR R+ A +L P H
Sbjct: 1183 LPATFKVSSSPQKEGRVSQRARVPKPGAGSKLSDRPLH 1220
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 35.8 bits (81), Expect = 0.061
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 55 GKHLEGTNKEAPPPGRNDSTLPST---RAPPSGLQEPLCTGGNSLGIPEESQASSPTL 109
GK L+G +E G+N+ +L ST RA G+Q+P S IP + AS+PTL
Sbjct: 1423 GKDLQGATEER---GKNEESLESTEGFRAAEQGVQKPAAETPASACIPGKPSASTPTL 1477
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 34.3 bits (77), Expect = 0.18
Identities = 54/208 (25%), Positives = 72/208 (34%), Gaps = 22/208 (10%)
Query: 60 GTNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDG 119
GT K P P ++ R P SG P GG L E S+ ++G
Sbjct: 617 GTMKPEPAPTSAGASRAQARLPHSG--GPAAGGGRQLKRDPERPESAKAF------GREG 668
Query: 120 SGFATEDEDKEWPHRLAQ----------QGSLLPPILLQ--ALWLTTGARHRTSKTSGAQ 167
SG E E + P +A G L P ++ Q +L L+ H +
Sbjct: 669 SGAQGEAEVRHPPVGIAVAVARQKDSGGSGRLGPGLVDQERSLSLSNVKGHGRADEDCVD 728
Query: 168 CPPMTSATCLLAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGPVLAQ 227
LL AR+ L+RE+ A RL P + A L P V GP LA
Sbjct: 729 DRARHREERLLGARLDRDQEKLLRESK-ELADLARLHPTSCAPNGLNPNLMVTGGPALAG 787
Query: 228 PNKVERRRTCHLLNTRGFLQAVGRLEEW 255
+ HL T +L G W
Sbjct: 788 SGRWSADPAAHLA-THPWLPRSGNASMW 814
>gi|239754993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 33.9 bits (76), Expect = 0.23
Identities = 43/177 (24%), Positives = 61/177 (34%), Gaps = 31/177 (17%)
Query: 30 AGKTLFRIPWKHVAKQGYQAWMVH-----KGKHLEGTNKEAPPPGRNDSTLPSTRAPPSG 84
A + L + H A + +AW G H T+ APPP + T S A P
Sbjct: 34 ASRPLRDLRASHRAPRTQRAWSSPLTPSPAGTHAGSTHTSAPPPNFWERTPGS--AQPLA 91
Query: 85 LQEPLC-------------------TGGNSLGIPEESQASSPTLTASSPNAQDGSGFATE 125
Q+PL T + L IP S + P+ + + G A
Sbjct: 92 FQKPLYAYLIFVIGDEPSLLSPFPHTHQSPLAIPSPSASPPPSCAPAPHSHPPPIGLALA 151
Query: 126 DEDKEWPHRLAQQGSLLPPI--LLQALWLTT---GARHRTSKTSGAQCPPMTSATCL 177
+ + WP + S PP+ Q+ W T G R R + S P CL
Sbjct: 152 CKSRRWPRAQPSRMSPGPPLWERRQSYWPLTRPLGPRARQAFESTCSSPESRPRPCL 208
>gi|25777612 proteasome 26S non-ATPase subunit 3 [Homo sapiens]
Length = 534
Score = 33.9 bits (76), Expect = 0.23
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 60 GTNKEAPPPGRNDSTLPSTRAPPS-GLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQD 118
G +K PPPG + P AP ++E TGG S G +A T A++ ++Q
Sbjct: 11 GADKAKPPPGGGEQEPPPPPAPQDVEMKEEAATGGGSTG-----EADGKTAAAAAEHSQR 65
Query: 119 GSGFATEDEDKEWPHRLAQQGS-LLPPILLQALWLTTGARHR 159
T ++ KE +L + S P +L+AL + R
Sbjct: 66 ELDTVTLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRR 107
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 33.1 bits (74), Expect = 0.40
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 22/155 (14%)
Query: 144 PILLQALWLTTGARHRTSKTSGAQCPPMTSATCLLAARVALLSAALVREATGRTAQRCRL 203
PI LQA T +S G++ P M+S++ ++RV LL L+R A + +R
Sbjct: 79 PISLQATPATPATLSASSSAGGSRTPAMSSSS---SSRV-LLRQQLMR-AQAQEQERRER 133
Query: 204 SPRAAAERLLGPPP--------------HVAAGPVLAQ-PNKVERRRTCHLLN-TRGFLQ 247
+AAA P P H + P AQ P +V + +T HL N TR LQ
Sbjct: 134 REQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQT-HLENPTRYHLQ 192
Query: 248 AVGRLEEWNRVAWERGHKDACRIIVCPPAGWSPDP 282
R + ++ G K A + + PP S P
Sbjct: 193 QARRQQVKQYLSTTLGPKLASQALTPPPGPASAQP 227
>gi|40807447 papillary renal cell carcinoma translocation-associated
gene product isoform 1 [Homo sapiens]
Length = 491
Score = 33.1 bits (74), Expect = 0.40
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 66 PPPGRNDST-----------LPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSP 114
PPPG + + LPS R P L P+ G LG+P+ + P A +P
Sbjct: 92 PPPGVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLPKPKKRKEPVKIA-AP 150
Query: 115 NAQDGSGFATEDE--DKEWPHRLAQQGSLLPPILLQALWLTTGARHR 159
G + EDE K+ + + +G+ L +L Q LT +R
Sbjct: 151 ELHKGDSDSEEDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNR 197
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 33.1 bits (74), Expect = 0.40
Identities = 41/167 (24%), Positives = 57/167 (34%), Gaps = 7/167 (4%)
Query: 61 TNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
TN P P + S+ + PS +P GG S P + ++SP ASS + GS
Sbjct: 2025 TNATYPMPTAKEHYPVSSPSSPSPPAQP---GGVSRNSPLDCGSASPNKVASSSEQEAGS 2081
Query: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSAT----C 176
E + P+ + GS Q + R PP T
Sbjct: 2082 PPVVETTNTRPPNSSSSSGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLA 2141
Query: 177 LLAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGP 223
+A VA+ S A V +T C + PPPH P
Sbjct: 2142 TSSAPVAVPSTAPVTYPMPQTPMGCPQPTPKMETPAIRPPPHGTTAP 2188
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 33.1 bits (74), Expect = 0.40
Identities = 41/167 (24%), Positives = 57/167 (34%), Gaps = 7/167 (4%)
Query: 61 TNKEAPPPGRNDSTLPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSPNAQDGS 120
TN P P + S+ + PS +P GG S P + ++SP ASS + GS
Sbjct: 1774 TNATYPMPTAKEHYPVSSPSSPSPPAQP---GGVSRNSPLDCGSASPNKVASSSEQEAGS 1830
Query: 121 GFATEDEDKEWPHRLAQQGSLLPPILLQALWLTTGARHRTSKTSGAQCPPMTSAT----C 176
E + P+ + GS Q + R PP T
Sbjct: 1831 PPVVETTNTRPPNSSSSSGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLA 1890
Query: 177 LLAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAGP 223
+A VA+ S A V +T C + PPPH P
Sbjct: 1891 TSSAPVAVPSTAPVTYPMPQTPMGCPQPTPKMETPAIRPPPHGTTAP 1937
>gi|40807450 papillary renal cell carcinoma translocation-associated
gene product isoform 2 [Homo sapiens]
Length = 459
Score = 33.1 bits (74), Expect = 0.40
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 66 PPPGRNDST-----------LPSTRAPPSGLQEPLCTGGNSLGIPEESQASSPTLTASSP 114
PPPG + + LPS R P L P+ G LG+P+ + P A +P
Sbjct: 92 PPPGVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLPKPKKRKEPVKIA-AP 150
Query: 115 NAQDGSGFATEDE--DKEWPHRLAQQGSLLPPILLQALWLTTGARHR 159
G + EDE K+ + + +G+ L +L Q LT +R
Sbjct: 151 ELHKGDSDSEEDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNR 197
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,887,129
Number of Sequences: 37866
Number of extensions: 1024087
Number of successful extensions: 4067
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 3943
Number of HSP's gapped (non-prelim): 192
length of query: 362
length of database: 18,247,518
effective HSP length: 104
effective length of query: 258
effective length of database: 14,309,454
effective search space: 3691839132
effective search space used: 3691839132
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.