Search of human proteins with 239746001

Search of human proteins with 239746001

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746001 PREDICTED: hypothetical protein XP_002344190 [Homo
sapiens]
         (253 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756985 PREDICTED: hypothetical protein XP_002345137 [Homo ...   533   e-152
gi|239751500 PREDICTED: hypothetical protein XP_002347885 [Homo ...   533   e-152
gi|239746001 PREDICTED: hypothetical protein XP_002344190 [Homo ...   533   e-152
gi|118402590 myosin XV [Homo sapiens]                                  42   5e-04
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ...    40   0.003
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]    38   0.010
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]    38   0.010
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]      38   0.010
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]            37   0.016
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            37   0.016
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]            37   0.016
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...    37   0.016
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]            37   0.016
gi|56676337 transmembrane protein 28 [Homo sapiens]                    36   0.037
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ...    35   0.048
gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo ...    35   0.048
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ...    35   0.048
gi|41281683 disabled homolog 2 interacting protein isoform 2 [Ho...    35   0.048
gi|94967023 disabled homolog 2 interacting protein isoform 1 [Ho...    35   0.048
gi|239754052 PREDICTED: hypothetical protein [Homo sapiens]            35   0.063
gi|239742598 PREDICTED: hypothetical protein [Homo sapiens]            35   0.063
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              35   0.063
gi|6912458 calcineurin binding protein 1 [Homo sapiens]                35   0.063
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]     35   0.063
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]     35   0.063
gi|55769539 hypothetical protein LOC221416 [Homo sapiens]              35   0.063
gi|134019487 chromatin modifying protein 1A isoform 1 [Homo sapi...    34   0.11 
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    34   0.14 
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       33   0.18 

>gi|239756985 PREDICTED: hypothetical protein XP_002345137 [Homo
           sapiens]
          Length = 253

 Score =  533 bits (1373), Expect = e-152
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL 60
           MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL
Sbjct: 1   MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL 60

Query: 61  TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV 120
           TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV
Sbjct: 61  TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV 120

Query: 121 VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA 180
           VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA
Sbjct: 121 VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA 180

Query: 181 PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA 240
           PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA
Sbjct: 181 PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA 240

Query: 241 ANANSFSPLFPLR 253
           ANANSFSPLFPLR
Sbjct: 241 ANANSFSPLFPLR 253


>gi|239751500 PREDICTED: hypothetical protein XP_002347885 [Homo
           sapiens]
          Length = 253

 Score =  533 bits (1373), Expect = e-152
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL 60
           MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL
Sbjct: 1   MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL 60

Query: 61  TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV 120
           TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV
Sbjct: 61  TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV 120

Query: 121 VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA 180
           VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA
Sbjct: 121 VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA 180

Query: 181 PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA 240
           PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA
Sbjct: 181 PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA 240

Query: 241 ANANSFSPLFPLR 253
           ANANSFSPLFPLR
Sbjct: 241 ANANSFSPLFPLR 253


>gi|239746001 PREDICTED: hypothetical protein XP_002344190 [Homo
           sapiens]
          Length = 253

 Score =  533 bits (1373), Expect = e-152
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL 60
           MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL
Sbjct: 1   MDPHTVTITTAISPKDQVLPAHKLEQGKNGKQVRCGEEPEGGGFVKAVPTPYFKVFWPGL 60

Query: 61  TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV 120
           TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV
Sbjct: 61  TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSV 120

Query: 121 VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA 180
           VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA
Sbjct: 121 VMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEA 180

Query: 181 PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA 240
           PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA
Sbjct: 181 PRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRRVRLRGRRLETA 240

Query: 241 ANANSFSPLFPLR 253
           ANANSFSPLFPLR
Sbjct: 241 ANANSFSPLFPLR 253


>gi|118402590 myosin XV [Homo sapiens]
          Length = 3530

 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 46/146 (31%), Positives = 54/146 (36%), Gaps = 26/146 (17%)

Query: 92  APAR-PCAPAASWGS-ASWSGLDSESDPDSVVMVDFTWDQQGARARRGVGTRLGRASSAA 149
           APA  P AP ASW +      +  E  PD +         +G+R RRG       AS  A
Sbjct: 706 APAHVPPAPQASWWAFVEPPAVSPEVPPDLLAFPGPRPSFRGSR-RRGAAFGFPGASPRA 764

Query: 150 VRRR----LGRGEEAAAQG-----CSPLFPP------------PPVAGDTEAPRSCGGGP 188
            RRR    L   + +         CSPL PP            PP       PRS    P
Sbjct: 765 SRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPARRPRSLQESP 824

Query: 189 RPETVRGK--PTSSCLPSQPRGRGPP 212
            P    G+  P  S LP  PR   PP
Sbjct: 825 APRRAAGRLGPPGSPLPGSPRPPSPP 850


>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 179

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/73 (34%), Positives = 32/73 (43%)

Query: 157 GEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFR 216
           G  AA    SP+ PPPP    T   R+   G  P   R  P++S  PS+  G   P    
Sbjct: 3   GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHA 62

Query: 217 TVTWAQPPPSWRR 229
           + +   PPP  RR
Sbjct: 63  STSSRSPPPRARR 75


>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
           sapiens]
          Length = 179

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/73 (34%), Positives = 32/73 (43%)

Query: 157 GEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFR 216
           G  AA    SP+ PPPP    T   R+   G  P   R  P++S  PS+  G   P    
Sbjct: 3   GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHA 62

Query: 217 TVTWAQPPPSWRR 229
           + +   PPP  RR
Sbjct: 63  STSSRSPPPRARR 75


>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
          Length = 166

 Score = 37.7 bits (86), Expect = 0.010
 Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 171 PPPVAGDTEAPRSCGGGPRPETVR--GKPTSSCLPSQPRGR--GPPQYFRTVTWAQPPP 225
           PPP  G  + P   GG P P   R  G P     P  PRGR  GPPQ         PPP
Sbjct: 84  PPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPP 142


>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 37.7 bits (86), Expect = 0.010
 Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 171 PPPVAGDTEAPRSCGGGPRPETVR--GKPTSSCLPSQPRGR--GPPQYFRTVTWAQPPP 225
           PPP  G  + P   GG P P   R  G P     P  PRGR  GPPQ         PPP
Sbjct: 84  PPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPP 142


>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 37.7 bits (86), Expect = 0.010
 Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 171 PPPVAGDTEAPRSCGGGPRPETVR--GKPTSSCLPSQPRGR--GPPQYFRTVTWAQPPP 225
           PPP  G  + P   GG P P   R  G P     P  PRGR  GPPQ         PPP
Sbjct: 84  PPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPP 142


>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 129 QQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGP 188
           Q+G    +G+G + G        +  G   ++A Q   P          T  PR   GG 
Sbjct: 130 QKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRP----------TRRPRGTRGGA 179

Query: 189 RPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRR 229
           R   VRG+  ++  P+ PR  G P   RT     PPP  RR
Sbjct: 180 RRPGVRGQGAAAVGPTGPRPTGAPPSRRT-----PPPGPRR 215


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 45/152 (29%), Positives = 57/152 (37%), Gaps = 23/152 (15%)

Query: 39  PEGGGFVKAVPTPYFKVFWPGLTSLRTGVLCAAAAANCSRAC------CCSSLGGSGTGA 92
           P G GF   +P P+    +   T LR     +A+A    R C       CSS G  G G 
Sbjct: 109 PAGPGFPPRLPRPFTSASFSNQTRLRRR---SASALPAPRLCPQRASPGCSSPGVRGPGG 165

Query: 93  PARP-----------CAPAASWGSASWSGLDSESDPDSVVMVDFTWDQQGARARRGVGTR 141
            A P            A  A+ G  S S   +  D  ++         +GA ARRG+  R
Sbjct: 166 GASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA-ALACAQLPRRPRGAGARRGMRRR 224

Query: 142 LGRASSAAVRRRLGRGEEAAAQGCSPLFPPPP 173
           LG     A R R      A A+G   L P  P
Sbjct: 225 LGAGERPAPRPR--GPPRAPARGARWLRPRRP 254


>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 129 QQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGP 188
           Q+G    +G+G + G        +  G   ++A Q   P          T  PR   GG 
Sbjct: 130 QKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRP----------TRRPRGTRGGA 179

Query: 189 RPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRR 229
           R   VRG+  ++  P+ PR  G P   RT     PPP  RR
Sbjct: 180 RRPGVRGQGAAAVGPTGPRPTGAPPSRRT-----PPPGPRR 215


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 45/152 (29%), Positives = 57/152 (37%), Gaps = 23/152 (15%)

Query: 39  PEGGGFVKAVPTPYFKVFWPGLTSLRTGVLCAAAAANCSRAC------CCSSLGGSGTGA 92
           P G GF   +P P+    +   T LR     +A+A    R C       CSS G  G G 
Sbjct: 109 PAGPGFPPRLPRPFTSASFSNQTRLRRR---SASALPAPRLCPQRASPGCSSPGVRGPGG 165

Query: 93  PARP-----------CAPAASWGSASWSGLDSESDPDSVVMVDFTWDQQGARARRGVGTR 141
            A P            A  A+ G  S S   +  D  ++         +GA ARRG+  R
Sbjct: 166 GASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA-ALACAQLPRRPRGAGARRGMRRR 224

Query: 142 LGRASSAAVRRRLGRGEEAAAQGCSPLFPPPP 173
           LG     A R R      A A+G   L P  P
Sbjct: 225 LGAGERPAPRPR--GPPRAPARGARWLRPRRP 254


>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 129 QQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGP 188
           Q+G    +G+G + G        +  G   ++A Q   P          T  PR   GG 
Sbjct: 130 QKGDFGPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRP----------TRRPRGTRGGA 179

Query: 189 RPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPPPSWRR 229
           R   VRG+  ++  P+ PR  G P   RT     PPP  RR
Sbjct: 180 RRPGVRGQGAAAVGPTGPRPTGAPPSRRT-----PPPGPRR 215


>gi|56676337 transmembrane protein 28 [Homo sapiens]
          Length = 472

 Score = 35.8 bits (81), Expect = 0.037
 Identities = 41/150 (27%), Positives = 52/150 (34%), Gaps = 28/150 (18%)

Query: 57  WPGLTSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESD 116
           WPG          AAA   C   CCC       +  P      A  W  +  S L     
Sbjct: 8   WPGKD--------AAALTIC---CCCCCWAPRPSDKPCADSERAQRWRLSLASLLFF--- 53

Query: 117 PDSVVMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEE---AAAQGCSPLFPPPP 173
             +V++ D  W   GAR R        R  S+A+R   G G E      +   PL PPPP
Sbjct: 54  --TVLLADHLWLCAGARPR-------ARELSSAMRPPWGAGRERQPVPPRAVLPLPPPPP 104

Query: 174 VAGDTEAPRSCGGGPRPETVRGKPTSSCLP 203
             G+  AP    G       +  P +   P
Sbjct: 105 --GEPSAPPGTCGPRYSNLTKAAPAAGSRP 132


>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
           sapiens]
          Length = 870

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 28/145 (19%)

Query: 91  GAPARP--------CAPAASWGSAS-------WSGLDSESDPDSVVMVDFTWDQQGARAR 135
           G+P RP        C P    G  S        +G  SE+D     + D  +  +GA   
Sbjct: 677 GSPGRPAFLRSPGLCGPGPVPGGLSVPTPCGRGAGDFSEAD-----LADRAFPVRGAGPI 731

Query: 136 RGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGG----GPRPE 191
            G   R G   +AA+R+   R +  A+   SP   P     +TEAPR  G      PRP 
Sbjct: 732 AGRRRRRGWTFAAALRKGAPREQPPASPAASPCQAPRAPEKETEAPRLRGRATAVAPRPL 791

Query: 192 TVRGKPTSSCL----PSQPRGRGPP 212
                 +  C+    P++ RG G P
Sbjct: 792 PAAPGFSGLCVLQPFPARSRGLGVP 816


>gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo
           sapiens]
          Length = 326

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 44/135 (32%), Positives = 54/135 (40%), Gaps = 34/135 (25%)

Query: 128 DQQGA-RARRGVGTRLGRASSAAVR--RRLGRGEEAAAQGCSPLFPPPPVAGDT--EAP- 181
           D+ GA RA RG   +    + AA R  + L     A      P      VAG T  E+P 
Sbjct: 159 DKAGAGRAGRGRPAQSPAEADAAARASKSLKLLSSALPPHLRPAAKTRAVAGPTAKESPP 218

Query: 182 --RSCGGGPRPETVRGKPTSSCLPSQPRG---RGPP-------QYFR--------TVTWA 221
             R+ G GPRP   R  P  S LP  P     RGPP        +FR        +V  A
Sbjct: 219 ALRTVGDGPRPGPKRPDPAPSRLPPPPHAGALRGPPLPHRLRRSHFREVGGGCADSVVLA 278

Query: 222 QP--------PPSWR 228
           +P        PP+WR
Sbjct: 279 EPSREQAHAAPPAWR 293


>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
           sapiens]
          Length = 538

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 28/145 (19%)

Query: 91  GAPARP--------CAPAASWGSAS-------WSGLDSESDPDSVVMVDFTWDQQGARAR 135
           G+P RP        C P    G  S        +G  SE+D     + D  +  +GA   
Sbjct: 345 GSPGRPAFLRSPGLCGPGPVPGGLSVPTPCGRGAGDFSEAD-----LADRAFPVRGAGPI 399

Query: 136 RGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGG----GPRPE 191
            G   R G   +AA+R+   R +  A+   SP   P     +TEAPR  G      PRP 
Sbjct: 400 AGRRRRRGWTFAAALRKGAPREQPPASPAASPCQAPRAPEKETEAPRLRGRATAVAPRPL 459

Query: 192 TVRGKPTSSCL----PSQPRGRGPP 212
                 +  C+    P++ RG G P
Sbjct: 460 PAAPGFSGLCVLQPFPARSRGLGVP 484


>gi|41281683 disabled homolog 2 interacting protein isoform 2 [Homo
           sapiens]
          Length = 1065

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 54/209 (25%), Positives = 74/209 (35%), Gaps = 35/209 (16%)

Query: 57  WPGLTSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARP--CAPA---------ASWGS 105
           WP     R   +  A  A   RA    +  G+  GAP RP   AP          A+   
Sbjct: 661 WPA----RATPVNLAGLATVRRAGQTPTTPGTSEGAPGRPQLLAPLSFQNPVYQMAAGLP 716

Query: 106 ASWSGL-DSESDPDSVVMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQG 164
            S  GL DS S+  S +      ++  A A+      LG  S+AA       GE A  Q 
Sbjct: 717 LSPRGLGDSGSEGHSSLSSHSNSEELAAAAK------LGSFSTAAEELARRPGELARRQ- 769

Query: 165 CSPLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQP- 223
                      G    PR    GP+    +  P     P  PRGR PP    T+ + +P 
Sbjct: 770 ----MSLTEKGGQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPRGRTPPNLLSTLQYPRPS 825

Query: 224 -------PPSWRRVRLRGRRLETAANANS 245
                   P W     R R+  +++  +S
Sbjct: 826 SGTLASASPDWVGPSTRLRQQSSSSKGDS 854


>gi|94967023 disabled homolog 2 interacting protein isoform 1 [Homo
           sapiens]
          Length = 1132

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 54/209 (25%), Positives = 74/209 (35%), Gaps = 35/209 (16%)

Query: 57  WPGLTSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARP--CAPA---------ASWGS 105
           WP     R   +  A  A   RA    +  G+  GAP RP   AP          A+   
Sbjct: 757 WPA----RATPVNLAGLATVRRAGQTPTTPGTSEGAPGRPQLLAPLSFQNPVYQMAAGLP 812

Query: 106 ASWSGL-DSESDPDSVVMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQG 164
            S  GL DS S+  S +      ++  A A+      LG  S+AA       GE A  Q 
Sbjct: 813 LSPRGLGDSGSEGHSSLSSHSNSEELAAAAK------LGSFSTAAEELARRPGELARRQ- 865

Query: 165 CSPLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQP- 223
                      G    PR    GP+    +  P     P  PRGR PP    T+ + +P 
Sbjct: 866 ----MSLTEKGGQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPRGRTPPNLLSTLQYPRPS 921

Query: 224 -------PPSWRRVRLRGRRLETAANANS 245
                   P W     R R+  +++  +S
Sbjct: 922 SGTLASASPDWVGPSTRLRQQSSSSKGDS 950


>gi|239754052 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 296

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 23/111 (20%)

Query: 62  SLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSVV 121
           S+  G+  +A  A  S  C C SL  SGT  PA                   E D   VV
Sbjct: 26  SVLLGLSNSALGAMASLTCLCYSLANSGTALPA------------------GEGDLHQVV 67

Query: 122 MVDFT-WDQQGARARRGVGTRLGR----ASSAAVRRRLGRGEEAAAQGCSP 167
           + + T +D   A        RL +    A + +++   GRGE AA++ C P
Sbjct: 68  IFESTRYDTHAASQTLKSHPRLPKPKQSARTPSIQVGRGRGEGAASRSCEP 118


>gi|239742598 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 296

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 23/111 (20%)

Query: 62  SLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSVV 121
           S+  G+  +A  A  S  C C SL  SGT  PA                   E D   VV
Sbjct: 26  SVLLGLSNSALGAMASLTCLCYSLANSGTALPA------------------GEGDLHQVV 67

Query: 122 MVDFT-WDQQGARARRGVGTRLGR----ASSAAVRRRLGRGEEAAAQGCSP 167
           + + T +D   A        RL +    A + +++   GRGE AA++ C P
Sbjct: 68  IFESTRYDTHAASQTLKSHPRLPKPKQSARTPSIQVGRGRGEGAASRSCEP 118


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 42/145 (28%), Positives = 54/145 (37%), Gaps = 25/145 (17%)

Query: 87   GSGTGAPARPCAPAASWGSASWS-GLDSESDPDSVVMVDFTWDQQGARARRGVGTRLGRA 145
            G GTG P  P AP     S + S G + E  P               + RR  G+  G  
Sbjct: 1067 GGGTGGPNHPPAPRGRTASETRSEGSEYEEIP---------------KRRRQRGSETGSE 1111

Query: 146  SSAAVRRRLGRGEEAAAQGCS---PLFPPPPVAGDTEAP-RSCGGGPRPETVRGKPTSSC 201
            +  +      +      +G     PL PPPP A  + AP R    G R  T RG P+   
Sbjct: 1112 THESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRR- 1170

Query: 202  LPSQPRGRGPPQYFRTVTWAQPPPS 226
               +  GR PPQ      W+ P  S
Sbjct: 1171 --GRGGGRPPPQV--CPGWSPPAKS 1191


>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
          Length = 2220

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 49/189 (25%), Positives = 62/189 (32%), Gaps = 31/189 (16%)

Query: 61   TSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSE------ 114
            T  R  +  A     C  +   S+L  S    P RP  P A+   AS      E      
Sbjct: 1964 TKPRPALAAATTIITCPPSASASTLDQSKDPGPPRPHRPEATPSMASLGPEGEELARVAE 2023

Query: 115  ----------------SDPDSVVMVDFTWDQQGARARRGVGTRLGRASSAAVR---RRLG 155
                              P S       W    A A  G G     +    +R   RR G
Sbjct: 2024 GTSFPPQEPRHSPQVKMAPTSSPAEPHCWP---AEAALGTGAEPTCSQEGKLRPEPRRDG 2080

Query: 156  RGEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQYF 215
              +EAA++   PL   PP A  ++AP S G    PE   GKP  S   S+P    P    
Sbjct: 2081 EAQEAASE-TQPL-SSPPTAASSKAPSS-GSAQPPEGHPGKPEPSRAKSRPLPNMPKLVI 2137

Query: 216  RTVTWAQPP 224
             +     PP
Sbjct: 2138 PSAATKFPP 2146



 Score = 32.0 bits (71), Expect = 0.53
 Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 11/92 (11%)

Query: 167  PLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSCLPS-------QPRGRGPPQYFRTVT 219
            P  P P  A   + P      PRP         +C PS       Q +  GPP+  R   
Sbjct: 1945 PTAPDPVPADSVQRPSDAHTKPRPALAAATTIITCPPSASASTLDQSKDPGPPRPHR--- 2001

Query: 220  WAQPPPSWRRVRLRGRRLETAANANSFSPLFP 251
              +  PS   +   G  L   A   SF P  P
Sbjct: 2002 -PEATPSMASLGPEGEELARVAEGTSFPPQEP 2032


>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
          Length = 621

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 39/155 (25%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 57  WPGLTSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESD 116
           W   TS   G+  AAA     R     S   +G+     PC+ +A       SGL+S + 
Sbjct: 44  WAAETSGGNGLGAAAA-----RRSLPDSASPAGSPEVPGPCSSSAGLDLKD-SGLESPAA 97

Query: 117 PDSVVMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAG 176
            ++ +   +        A  GVG  LG A  A  R                    P +AG
Sbjct: 98  AEAPLRGQYKVTASPETAVAGVGHELGTAGDAGAR--------------------PDLAG 137

Query: 177 DTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGP 211
             +A  +  G   P +  G  +SSC    P G  P
Sbjct: 138 TCQAELTAAGSEEPSSAGGL-SSSCSDPSPPGESP 171


>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
          Length = 620

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 39/155 (25%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 57  WPGLTSLRTGVLCAAAAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESD 116
           W   TS   G+  AAA     R     S   +G+     PC+ +A       SGL+S + 
Sbjct: 44  WAAETSGGNGLGAAAA-----RRSLPDSASPAGSPEVPGPCSSSAGLDLKD-SGLESPAA 97

Query: 117 PDSVVMVDFTWDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAG 176
            ++ +   +        A  GVG  LG A  A  R                    P +AG
Sbjct: 98  AEAPLRGQYKVTASPETAVAGVGHELGTAGDAGAR--------------------PDLAG 137

Query: 177 DTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGP 211
             +A  +  G   P +  G  +SSC    P G  P
Sbjct: 138 TCQAELTAAGSEEPSSAGGL-SSSCSDPSPPGESP 171


>gi|55769539 hypothetical protein LOC221416 [Homo sapiens]
          Length = 242

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 39/121 (32%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 127 WDQQGARARRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGG 186
           W Q  AR  R     + RA++AA     G    A        FPPPP A    APRS G 
Sbjct: 106 WVQTLARMSRRTRGPVERAAAAAAAAAGGDAGHAP-------FPPPPAADGARAPRSPGQ 158

Query: 187 -GPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQP---------PPSWRRVRLRGRR 236
             PR   +R     S L    R   P   FR    A+P         P + R  R+ G R
Sbjct: 159 VTPRGLRLRLPRRESLLRGLCRPLRPLLGFRESDSAKPASLRLLQHTPSARRNYRIAGAR 218

Query: 237 L 237
           L
Sbjct: 219 L 219


>gi|134019487 chromatin modifying protein 1A isoform 1 [Homo
           sapiens]
          Length = 240

 Score = 34.3 bits (77), Expect = 0.11
 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 6/96 (6%)

Query: 135 RRGVGTRLGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGPRPETVR 194
           RRG        +  A R RL RG E  AQ   P         +   PR C      + + 
Sbjct: 147 RRGEWPGGAGPAQPAARGRLCRGRELCAQPGGPAVTEVGRLEELAVPRRCAPPLPRDVLE 206

Query: 195 GK---PTSSCLPSQPRGRGPPQYFRTVTWAQPPPSW 227
           G    PT+SCL + P G  P     T+  +   P+W
Sbjct: 207 GSCPLPTASCLCADPAGLRPA---ATLRLSPARPAW 239


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 12/71 (16%)

Query: 155 GRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSCLPSQPRGRGPPQY 214
           G G  A A+G     P PP AG     R  GGGP+    R  P S   P  P G  PP  
Sbjct: 72  GAGPAAPAEGAPGAAPEPPPAG---RARPGGGGPQ----RPGPPSPRRPLVPAGPAPP-- 122

Query: 215 FRTVTWAQPPP 225
                  +PPP
Sbjct: 123 ---AAKLRPPP 130



 Score = 29.3 bits (64), Expect = 3.4
 Identities = 37/159 (23%), Positives = 53/159 (33%), Gaps = 13/159 (8%)

Query: 72  AAANCSRACCCSSLGGSGTGAPARPCAPAASWGSASWSGLDSESDPDSVVMVDFTWDQQG 131
           +A +C+     +++      APA P  PA     A+ +G      P             G
Sbjct: 133 SAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGP-------GPGPG 185

Query: 132 ARARRGVGTRLGRASSAAVRRRLGRGEEAAA---QGCSPLFP-PPPVAGDT--EAPRSCG 185
                G G       SAA+         A +    G + L P P P A  T  + P   G
Sbjct: 186 PGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVG 245

Query: 186 GGPRPETVRGKPTSSCLPSQPRGRGPPQYFRTVTWAQPP 224
               P      P ++  P+ P    PP      T A+PP
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPP 284


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 142 LGRASSAAVRRRLGRGEEAAAQGCSPLFPPPPVAGDTEAPRSCGGGPRPETVRGKPTSSC 201
           LG  + + + +RL     A  Q  S     PP  G     R   GGP        P S  
Sbjct: 496 LGPPAGSPLPQRLPSPTSAPQQPASQA--APPTQGQGRQSRPVAGGPGAPPAARPPAS-- 551

Query: 202 LPSQPRGRGPPQYFRTVTWAQPPP 225
            PS  R  GPPQ  R  + + P P
Sbjct: 552 -PSPQRQAGPPQATRQTSVSGPAP 574


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,495,297
Number of Sequences: 37866
Number of extensions: 843926
Number of successful extensions: 4900
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 4483
Number of HSP's gapped (non-prelim): 679
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.