Search of human proteins with 239745813

Search of human proteins with 239745813

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
sapiens]
         (279 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo ...   601   e-172
gi|239756790 PREDICTED: similar to hCG1991532 [Homo sapiens]          359   1e-99
gi|239751314 PREDICTED: hypothetical protein XP_002347802 [Homo ...   291   6e-79
gi|226693407 TBC1 domain family, member 3H [Homo sapiens]             186   2e-47
gi|14149985 TBC1 domain family, member 3F [Homo sapiens]              186   2e-47
gi|183583565 TBC1 domain family, member 3 [Homo sapiens]              186   2e-47
gi|183583567 TBC1 domain family, member 3E [Homo sapiens]             186   2e-47
gi|149999613 TBC1 domain family, member 3B [Homo sapiens]             186   2e-47
gi|183583563 TBC1 domain family, member 3D [Homo sapiens]             186   2e-47
gi|109638751 ubiquitin specific protease 6 [Homo sapiens]             186   2e-47
gi|90577185 TBC1 domain family member 3C [Homo sapiens]               186   2e-47
gi|157502205 TBC1 domain family, member 3G [Homo sapiens]             186   2e-47
gi|239756926 PREDICTED: similar to TBC1 domain family, member 3 ...   179   2e-45
gi|239756746 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    46   3e-05
gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    46   3e-05
gi|239745731 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    46   3e-05
gi|41281612 zinc finger protein 828 [Homo sapiens]                     42   8e-04
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    39   0.004
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              36   0.043
gi|149944590 SRR1 domain containing [Homo sapiens]                     36   0.043
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho...    36   0.043
gi|109389358 transcription factor AP-2 alpha isoform c [Homo sap...    35   0.056
gi|73760407 transcription factor AP-2 alpha isoform b [Homo sapi...    35   0.056
gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens]    35   0.056
gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens]      35   0.056
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]    34   0.16 
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]    34   0.16 
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]    34   0.16 
gi|42544243 dynamin 3 isoform a [Homo sapiens]                         33   0.21 
gi|209915561 dynamin 3 isoform b [Homo sapiens]                        33   0.21 

>gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
           sapiens]
          Length = 279

 Score =  601 bits (1549), Expect = e-172
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MGPHYADIYKGTDRLGILQWVDEAQMAASPLPMYPGPTPLPGDDHETQHPPSSSRPLSWP 60
           MGPHYADIYKGTDRLGILQWVDEAQMAASPLPMYPGPTPLPGDDHETQHPPSSSRPLSWP
Sbjct: 1   MGPHYADIYKGTDRLGILQWVDEAQMAASPLPMYPGPTPLPGDDHETQHPPSSSRPLSWP 60

Query: 61  QKAQHPMGPEESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGL 120
           QKAQHPMGPEESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGL
Sbjct: 61  QKAQHPMGPEESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGL 120

Query: 121 WARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPP 180
           WARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPP
Sbjct: 121 WARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPP 180

Query: 181 GPQAHFQQCIWSASPPWVPLPFTPCPVLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLPQL 240
           GPQAHFQQCIWSASPPWVPLPFTPCPVLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLPQL
Sbjct: 181 GPQAHFQQCIWSASPPWVPLPFTPCPVLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLPQL 240

Query: 241 PMDSDVVSPWFPHYDFEQGCWARVPSKCVLDSPGTMGQT 279
           PMDSDVVSPWFPHYDFEQGCWARVPSKCVLDSPGTMGQT
Sbjct: 241 PMDSDVVSPWFPHYDFEQGCWARVPSKCVLDSPGTMGQT 279


>gi|239756790 PREDICTED: similar to hCG1991532 [Homo sapiens]
          Length = 167

 Score =  359 bits (922), Expect = 1e-99
 Identities = 166/167 (99%), Positives = 166/167 (99%)

Query: 113 MKASRSGLWARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLC 172
           MKASRSGLWARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLC
Sbjct: 1   MKASRSGLWARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLC 60

Query: 173 KGSRQAPPGPQAHFQQCIWSASPPWVPLPFTPCPVLVGLSQGVPRLAPAQGGPRVSWRYL 232
           KGSRQAPPGPQAHFQQ IWSASPPWVPLPFTPCPVLVGLSQGVPRLAPAQGGPRVSWRYL
Sbjct: 61  KGSRQAPPGPQAHFQQRIWSASPPWVPLPFTPCPVLVGLSQGVPRLAPAQGGPRVSWRYL 120

Query: 233 QWNSLPQLPMDSDVVSPWFPHYDFEQGCWARVPSKCVLDSPGTMGQT 279
           QWNSLPQLPMDSDVVSPWFPHYDFEQGCWARVPSKCVLDSPGTMGQT
Sbjct: 121 QWNSLPQLPMDSDVVSPWFPHYDFEQGCWARVPSKCVLDSPGTMGQT 167


>gi|239751314 PREDICTED: hypothetical protein XP_002347802 [Homo
           sapiens]
          Length = 179

 Score =  291 bits (744), Expect = 6e-79
 Identities = 130/131 (99%), Positives = 131/131 (100%)

Query: 149 SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASPPWVPLPFTPCPVL 208
           +KPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASPPWVPLPFTPCPVL
Sbjct: 49  AKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASPPWVPLPFTPCPVL 108

Query: 209 VGLSQGVPRLAPAQGGPRVSWRYLQWNSLPQLPMDSDVVSPWFPHYDFEQGCWARVPSKC 268
           VGLSQGVPRLAPAQGGPRVSWRYLQWNSLPQLPMDSDVVSPWFPHYDFEQGCWARVPSKC
Sbjct: 109 VGLSQGVPRLAPAQGGPRVSWRYLQWNSLPQLPMDSDVVSPWFPHYDFEQGCWARVPSKC 168

Query: 269 VLDSPGTMGQT 279
           VLDSPGTMGQT
Sbjct: 169 VLDSPGTMGQT 179


>gi|226693407 TBC1 domain family, member 3H [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|14149985 TBC1 domain family, member 3F [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|183583565 TBC1 domain family, member 3 [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|183583567 TBC1 domain family, member 3E [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|149999613 TBC1 domain family, member 3B [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|183583563 TBC1 domain family, member 3D [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|109638751 ubiquitin specific protease 6 [Homo sapiens]
          Length = 1406

 Score =  186 bits (472), Expect = 2e-47
 Identities = 104/209 (49%), Positives = 124/209 (59%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K LMK SR GLWAR ++QF  TWA++ D 
Sbjct: 278 LGLTLRLWDVYLVEGEQVLMPITSIALKVQQKRLMKTSRCGLWARLRNQFFDTWAMNDDT 337

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS              +K +QGS APRP  AS  G KTLCKG RQAPPGP A F
Sbjct: 338 VLKHLRASTKKLTRKQGDLPPPAKREQGSLAPRPVPASR-GGKTLCKGYRQAPPGPPAQF 396

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
           Q+ I SASPPW     TPCP          VG +QGVP LA AQGGP+ SWR+L+W S+P
Sbjct: 397 QRPICSASPPWASRFSTPCPGGAVREDTYPVG-TQGVPSLALAQGGPQGSWRFLEWKSMP 455

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D D+  PWFPHYDFE  CW R  S+
Sbjct: 456 RLPTDLDIGGPWFPHYDFEWSCWVRAISQ 484


>gi|90577185 TBC1 domain family member 3C [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|157502205 TBC1 domain family, member 3G [Homo sapiens]
          Length = 549

 Score =  186 bits (472), Expect = 2e-47
 Identities = 105/209 (50%), Positives = 122/209 (58%), Gaps = 22/209 (10%)

Query: 79  VGLPRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDSDA 138
           +GL  R   +    G     PI  +      K L K SR G WARF ++F  TWA D D 
Sbjct: 279 LGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDT 338

Query: 139 VLRHLQASVL------------SKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHF 186
           VL+HL+AS+             +KP+QGSSA RP  AS  G KTLCKG RQAPPGP A F
Sbjct: 339 VLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASR-GGKTLCKGDRQAPPGPPARF 397

Query: 187 QQCIWSASPPWVPLPFTPCP--------VLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLP 238
            + IWSASPP  P   TPCP          VG +QGVP  A AQGGP+ SWR+LQWNS+P
Sbjct: 398 PRPIWSASPPRAPRSSTPCPGGAVREDTYPVG-TQGVPSPALAQGGPQGSWRFLQWNSMP 456

Query: 239 QLPMDSDVVSPWFPHYDFEQGCWARVPSK 267
           +LP D DV  PWF HYDF Q CW R  S+
Sbjct: 457 RLPTDLDVEGPWFRHYDFRQSCWVRAISQ 485


>gi|239756926 PREDICTED: similar to TBC1 domain family, member 3
           [Homo sapiens]
          Length = 424

 Score =  179 bits (455), Expect = 2e-45
 Identities = 101/189 (53%), Positives = 114/189 (60%), Gaps = 24/189 (12%)

Query: 110 KHLMKASRSGLWARFQDQFPQTWALDSDAVLRHLQASVL------------SKPKQGSSA 157
           K L K SR G WARF ++F   WA D D VL+HL+AS+             +KP+QGSSA
Sbjct: 185 KRLTKTSRCGPWARFWNRFVDAWARDDDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSA 244

Query: 158 PRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASPPWVPLPFTPCP--------VLV 209
            RP  AS  G KTLCKG RQAPPGP A F   IWSASPP  P   TPCP          V
Sbjct: 245 SRPVPASR-GGKTLCKGDRQAPPGPPARFPWPIWSASPPRAPRSSTPCPGGAVREDTYPV 303

Query: 210 GLSQGVPRLAPAQGGPRVSWRYLQWNSLPQLPMDSDVVSPWFPHYDFEQGCWARVPSKCV 269
           G +QGVP  A AQGGP+ SWR+LQWNS+P+LP D DV  PWF  YDF Q CW R  S+  
Sbjct: 304 G-TQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVGDPWFRRYDFRQSCWVRAISQ-- 360

Query: 270 LDSPGTMGQ 278
            D P T  Q
Sbjct: 361 EDQPATCWQ 369


>gi|239756746 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 339

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 110 KHLMKASRSGLWARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPE 161
           +HLMK S S +W  FQ++  Q+WAL+ ++VLR+LQ S+    K+    P PE
Sbjct: 172 EHLMKLSWSTVW-EFQERLSQSWALEDNSVLRNLQTSMKELTKKHWDLPSPE 222


>gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 617

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 110 KHLMKASRSGLWARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPE 161
           +HLMK S S +W  FQ++  Q+WAL+ ++VLR+LQ S+    K+    P PE
Sbjct: 302 EHLMKLSWSTVW-EFQERLSQSWALEDNSVLRNLQTSMKELTKKHWDLPSPE 352


>gi|239745731 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 339

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 110 KHLMKASRSGLWARFQDQFPQTWALDSDAVLRHLQASVLSKPKQGSSAPRPE 161
           +HLMK S S +W  FQ++  Q+WAL+ ++VLR+LQ S+    K+    P PE
Sbjct: 172 EHLMKLSWSTVW-EFQERLSQSWALEDNSVLRNLQTSMKELTKKHWDLPSPE 222


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 71/260 (27%), Positives = 87/260 (33%), Gaps = 44/260 (16%)

Query: 23  EAQMAASPL-PMYPGPTPLPGDDHETQHPPSSSRP-LSWPQKAQHPMGPEESGVLEPLVG 80
           E Q   S L P  P PTPL     E Q P S   P L  P  +  P  P      EP   
Sbjct: 133 ETQKLGSVLSPESPKPTPLT--PLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKS 190

Query: 81  LPRRRSGLVSRAGHSDAEPIPHVTQMK---VGKHLMKASRSGLWARFQDQFPQTWALDSD 137
           +P   S  ++        P+P     K   V    +KA+ S    + Q  FP+T    S 
Sbjct: 191 VPVCESQKLA--------PVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPS- 241

Query: 138 AVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASP-P 196
                  AS    P   +S P P   SP       K +R   P P+        S SP P
Sbjct: 242 -------ASSPESPVLAAS-PEPWGPSPAASPESRKSARTTSPEPRKPSP----SESPEP 289

Query: 197 WVPLP-FTPCPVLVGLSQGVPRLAPAQGGPRVSWRYLQWNSLPQL---------PMDSDV 246
           W P P  +P P      +  P ++P    P        W S P           P  S  
Sbjct: 290 WKPFPAVSPEP-----RRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVS 344

Query: 247 VSPWFPHYDFEQGCWARVPS 266
             PW P      G W   PS
Sbjct: 345 PGPWKPIPSVSPGPWKPTPS 364


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
           sapiens]
          Length = 1362

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 46/197 (23%), Positives = 70/197 (35%), Gaps = 13/197 (6%)

Query: 23  EAQMAASPLPMYPGPTPL----PGDDHETQHPPSSSRPLSWPQKAQHPMGPEESGVLEPL 78
           + Q A +P+P  P P P     P    + Q PP    P S PQ+A   M       +   
Sbjct: 745 QMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQ 804

Query: 79  VGL--PRRRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGLWARFQDQFPQTWALDS 136
           V +  P+    +    GH   +PI H+ Q ++  HL +                  A+ S
Sbjct: 805 VPVLEPQLPGSVFDPIGHF-TQPILHLPQPELPPHLPQPPEHSTPPHLNQH-----AVVS 858

Query: 137 DAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASPP 196
              L +      S+P   ++A  P+ A P         +   P  P A   Q +     P
Sbjct: 859 PPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEP 918

Query: 197 WVPLPFTPCPVLVGLSQ 213
             P P T   + + L Q
Sbjct: 919 PAP-PLTSMQMQLYLQQ 934


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 35.8 bits (81), Expect = 0.043
 Identities = 49/193 (25%), Positives = 66/193 (34%), Gaps = 26/193 (13%)

Query: 32  PMYPGPTPLPGDDHETQHPPSSSRPLSWPQKAQHPM--------GPEESGVLEPLVGLPR 83
           P    PTP    +   Q PP+ S P   P  A  P             SG  E     P+
Sbjct: 535 PPASAPTPETEPEEPAQAPPAQSTPT--PGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQ 592

Query: 84  RRSGLVSRAGHSDAEPIPHVTQMKVGKHLMKASRSGL----------WARFQDQFPQTWA 133
               L S+ G    E +P  T   V K   K    G           + ++Q   P  + 
Sbjct: 593 ----LPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQ 648

Query: 134 LDS-DAVLRHLQASVLSKPKQGSSAPRPELASPCGRKTL-CKGSRQAPPGPQAHFQQCIW 191
               + +L+  Q     + +QGS+ P P   SP    TL    + QAPP P         
Sbjct: 649 RQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGAL 708

Query: 192 SASPPWVPLPFTP 204
              PP  P+ F P
Sbjct: 709 GRPPPMPPMNFDP 721


>gi|149944590 SRR1 domain containing [Homo sapiens]
          Length = 339

 Score = 35.8 bits (81), Expect = 0.043
 Identities = 18/50 (36%), Positives = 26/50 (52%)

Query: 138 AVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQ 187
           A L   QA+   K +  +  PR   A+P GR+   +G   AP GP+A F+
Sbjct: 7   AALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFE 56


>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
           sapiens]
          Length = 406

 Score = 35.8 bits (81), Expect = 0.043
 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 11/79 (13%)

Query: 150 KPKQGSSAPRPELASPCGRKTLCKGSRQA--PPGPQAHFQQCIWSASPPWVPL-PFTPCP 206
           +P      PRP +A       +  GSR A  PPGP+        +  PPW P+ P  P P
Sbjct: 255 RPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPR-------MAPVPPWPPMAPVPPWP 307

Query: 207 VLVGLSQGVPRLAPAQGGP 225
            +  +  G P +AP   GP
Sbjct: 308 PMAPVPTG-PPMAPVPPGP 325


>gi|109389358 transcription factor AP-2 alpha isoform c [Homo
           sapiens]
          Length = 433

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 20/112 (17%)

Query: 11  GTDRLGILQWVDEAQMAASPL-----------PMYPGPT----PLPGDDHETQHPPSSSR 55
           GT RL  L  V ++   ++P            P +P P     P   D +   + P S  
Sbjct: 20  GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLN 79

Query: 56  PLSWPQKAQHPMGP-----EESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPH 102
           PL    + QHP  P     +ESG+L    GLP + SGL  R  +   E + H
Sbjct: 80  PLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 131


>gi|73760407 transcription factor AP-2 alpha isoform b [Homo
           sapiens]
          Length = 431

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 20/112 (17%)

Query: 11  GTDRLGILQWVDEAQMAASPL-----------PMYPGPT----PLPGDDHETQHPPSSSR 55
           GT RL  L  V ++   ++P            P +P P     P   D +   + P S  
Sbjct: 18  GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLN 77

Query: 56  PLSWPQKAQHPMGP-----EESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPH 102
           PL    + QHP  P     +ESG+L    GLP + SGL  R  +   E + H
Sbjct: 78  PLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 129


>gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens]
          Length = 437

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 20/112 (17%)

Query: 11  GTDRLGILQWVDEAQMAASPL-----------PMYPGPT----PLPGDDHETQHPPSSSR 55
           GT RL  L  V ++   ++P            P +P P     P   D +   + P S  
Sbjct: 24  GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLN 83

Query: 56  PLSWPQKAQHPMGP-----EESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPH 102
           PL    + QHP  P     +ESG+L    GLP + SGL  R  +   E + H
Sbjct: 84  PLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 135


>gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens]
          Length = 476

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 11/72 (15%)

Query: 35 PGPTPLPGDDHETQHPPSSSRPLSWPQKAQHPMGPEE--------SGVLEPLVGLPRRRS 86
          PGP P  G   +  HP  +  PL   Q  Q P GPE+         GVL+   GLP  R 
Sbjct: 28 PGPPPAHGAALQP-HPRVNFCPLPSEQCYQAPGGPEDRGPAWVGSHGVLQHTQGLPADRG 86

Query: 87 GLVSRAGHSDAE 98
          GL  R G  DAE
Sbjct: 87 GL--RPGSLDAE 96


>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo
          sapiens]
          Length = 170

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 27 AASPLPMYPGPTPLPGDDHETQHPPSSSRPLSWPQKAQHPMGPEESG 73
          AASP P    P P P    E    P+ SRP + P+ A  P GPEE G
Sbjct: 32 AASPEPARAPPEPAP--PAEATGAPAPSRPCA-PEPAASPAGPEEPG 75


>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo
          sapiens]
          Length = 177

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 27 AASPLPMYPGPTPLPGDDHETQHPPSSSRPLSWPQKAQHPMGPEESG 73
          AASP P    P P P    E    P+ SRP + P+ A  P GPEE G
Sbjct: 32 AASPEPARAPPEPAP--PAEATGAPAPSRPCA-PEPAASPAGPEEPG 75


>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo
          sapiens]
          Length = 204

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 27 AASPLPMYPGPTPLPGDDHETQHPPSSSRPLSWPQKAQHPMGPEESG 73
          AASP P    P P P    E    P+ SRP + P+ A  P GPEE G
Sbjct: 32 AASPEPARAPPEPAP--PAEATGAPAPSRPCA-PEPAASPAGPEEPG 75


>gi|42544243 dynamin 3 isoform a [Homo sapiens]
          Length = 863

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 143 LQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASPPWVPLPF 202
           +Q S  S P   ++  RP L++P  R T  +G   A P P  H      S +P   P+PF
Sbjct: 757 IQHSRRSPPPSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPH------SGAP---PVPF 807

Query: 203 TPCPV 207
            P P+
Sbjct: 808 RPGPL 812


>gi|209915561 dynamin 3 isoform b [Homo sapiens]
          Length = 859

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 143 LQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQQCIWSASPPWVPLPF 202
           +Q S  S P   ++  RP L++P  R T  +G   A P P  H      S +P   P+PF
Sbjct: 753 IQHSRRSPPPSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPH------SGAP---PVPF 803

Query: 203 TPCPV 207
            P P+
Sbjct: 804 RPGPL 808


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,304,979
Number of Sequences: 37866
Number of extensions: 967755
Number of successful extensions: 4266
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 4049
Number of HSP's gapped (non-prelim): 381
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.