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Search of human proteins with 239745771
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
sapiens]
(323 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo ... 681 0.0
gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo ... 681 0.0
gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo ... 681 0.0
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 49 5e-06
gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ... 49 8e-06
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 46 4e-05
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 46 4e-05
gi|6005997 double C2-like domains, beta [Homo sapiens] 46 4e-05
gi|210032580 SET domain containing 1B [Homo sapiens] 46 5e-05
gi|169172231 PREDICTED: hypothetical protein [Homo sapiens] 45 9e-05
gi|169170975 PREDICTED: hypothetical protein [Homo sapiens] 45 9e-05
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 44 2e-04
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 44 3e-04
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 43 3e-04
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 4e-04
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 4e-04
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 4e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 4e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 42 6e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 42 6e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 42 7e-04
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 42 0.001
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 42 0.001
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 42 0.001
>gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo
sapiens]
Length = 323
Score = 681 bits (1756), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA 60
MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA
Sbjct: 1 MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA 60
Query: 61 PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA 120
PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA
Sbjct: 61 PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA 120
Query: 121 ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA 180
ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA
Sbjct: 121 ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA 180
Query: 181 GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP 240
GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP
Sbjct: 181 GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP 240
Query: 241 RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR 300
RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR
Sbjct: 241 RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR 300
Query: 301 GSLQTPGQARKHLYGPSLCPTTR 323
GSLQTPGQARKHLYGPSLCPTTR
Sbjct: 301 GSLQTPGQARKHLYGPSLCPTTR 323
>gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
sapiens]
Length = 323
Score = 681 bits (1756), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA 60
MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA
Sbjct: 1 MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA 60
Query: 61 PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA 120
PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA
Sbjct: 61 PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA 120
Query: 121 ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA 180
ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA
Sbjct: 121 ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA 180
Query: 181 GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP 240
GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP
Sbjct: 181 GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP 240
Query: 241 RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR 300
RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR
Sbjct: 241 RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR 300
Query: 301 GSLQTPGQARKHLYGPSLCPTTR 323
GSLQTPGQARKHLYGPSLCPTTR
Sbjct: 301 GSLQTPGQARKHLYGPSLCPTTR 323
>gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo
sapiens]
Length = 323
Score = 681 bits (1756), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA 60
MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA
Sbjct: 1 MALHLSRVSRRRGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFA 60
Query: 61 PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA 120
PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA
Sbjct: 61 PLHWLRLDDPGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAA 120
Query: 121 ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA 180
ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA
Sbjct: 121 ACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRA 180
Query: 181 GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP 240
GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP
Sbjct: 181 GRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEP 240
Query: 241 RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR 300
RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR
Sbjct: 241 RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFR 300
Query: 301 GSLQTPGQARKHLYGPSLCPTTR 323
GSLQTPGQARKHLYGPSLCPTTR
Sbjct: 301 GSLQTPGQARKHLYGPSLCPTTR 323
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 49.3 bits (116), Expect = 5e-06
Identities = 55/178 (30%), Positives = 66/178 (37%), Gaps = 39/178 (21%)
Query: 102 RRGAR--SLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVG 159
RRGA + P +P GA A AAA P TP P A RAP+
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPP--------TPAPPPPPAPVAAAAPARAPR---A 151
Query: 160 AGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADL 219
A A P GP +P G R +R A A PP + PAVA
Sbjct: 152 AAAAATAPPSPGPAQP-----GPRAQRAA--------PLAAPPPAPAAPPAVAPPAGPRR 198
Query: 220 CPPVAPAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPG 277
PP A A E PP P+ P+P +Q P+ +P PP VR G
Sbjct: 199 APPPAVAAREPPLPP----PPQPPAPPQQQQPPPPQPQP---------PPEGGAVRAG 243
>gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo
sapiens]
Length = 316
Score = 48.5 bits (114), Expect = 8e-06
Identities = 64/234 (27%), Positives = 84/234 (35%), Gaps = 51/234 (21%)
Query: 90 WVSRFRGWAPGSRRGARSLPASPLGAQARAAACV---------PGKGGAASR--GDTPCS 138
W R R APG++RG R + + + RA + PG+GG G T
Sbjct: 49 WKQRGRNGAPGTQRGVREVGSPTRDQEIRAGSSCGRAARGFPEPGRGGKTQEWGGGTGTP 108
Query: 139 RQPSR-SPLAGRSVRAPQRRVGAGAGWRGGP-GLGPVRPPGWRA-----------GRRTR 185
+ P +P A S+ P + G A +GG G P R PG R G+R R
Sbjct: 109 QSPGPCAPQALASLLGPGK-AGCRARLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPR 167
Query: 186 RTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPV-------APAVLEQKGPPSSR- 237
T+ G +PP S+ P R PP P L + PPS +
Sbjct: 168 NTSLAQASRSGTVPGLPP-ASLQPL----RVPYFAPPGPHDPTSRGPGRLLTREPPSRKL 222
Query: 238 -------------TEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGR 278
P P+P +A P LRP R L P R P P R
Sbjct: 223 PPPLPLCRSRWVLAPPPPPAPPGPNAAAHPPLRPPRARLQDPVDPERCPGGPSR 276
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 47.0 bits (110), Expect = 2e-05
Identities = 59/211 (27%), Positives = 79/211 (37%), Gaps = 40/211 (18%)
Query: 90 WVSRFRGWAPGSRRGARSLPASPLGAQARAAACV---------PGKGGAASRGDTPCSRQ 140
W R R APG++RG R + + + RA + PG+GG +
Sbjct: 49 WKQRGRNGAPGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTP 108
Query: 141 PSRSPLAGRSVRAPQRRVGAGAGWR---GGPGLGPVRPPGWR-----------AGRRTRR 186
S P A +++ + AG R G G P R PG R G+R R
Sbjct: 109 QSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRN 168
Query: 187 TAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGP--PSSRTEPRAPS 244
T+ G +PP S+ P R L PP GP P+SR R +
Sbjct: 169 TSLAQASRSGTVPGLPP-ASLQPL----RLPYLAPP---------GPHDPTSRGPGRLLT 214
Query: 245 PMEQASAGVPRLRPGRRALWHLFPPPRVPVR 275
E S +P P R+ W L PPP V R
Sbjct: 215 -CEPPSRKLPPPLPPCRSRWVLAPPPTVRPR 244
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 46.2 bits (108), Expect = 4e-05
Identities = 61/213 (28%), Positives = 80/213 (37%), Gaps = 25/213 (11%)
Query: 93 RFRGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVR 152
R GW GAR+ LG + C PG +R P + +R+ LAG+
Sbjct: 397 RREGW------GARA----KLGGRGVCGKCGPGPWDDPARRRNPGAA--ARAKLAGQRAG 444
Query: 153 APQRRVGAGAGWRG---GPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDP 209
+ R G+ G RG GPG G V G R R G + +P L +VDP
Sbjct: 445 RARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDP 504
Query: 210 AVAFSRAADLC---PPVAPAVLEQKG-PPSSRTEPR-APSPMEQASAGVPRLRPGRRALW 264
A R D + V + G PPS+ PR P + P P RAL
Sbjct: 505 ARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTPPPARALP 564
Query: 265 HLFPPPRVPVR-PGRDWLGNRGRKRSQSSKESG 296
R +R PG G R RS+ + G
Sbjct: 565 AAVASARCSLRDPG----GGSARIRSRPGRSGG 593
Score = 30.4 bits (67), Expect = 2.2
Identities = 40/132 (30%), Positives = 51/132 (38%), Gaps = 20/132 (15%)
Query: 92 SRFRGWAPGSRR---GARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAG 148
SR RGW PG+ R G R +P AAA P + +R R P A
Sbjct: 456 SRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAA 515
Query: 149 RSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGK---TLAVPPLV 205
A + +G G G GP PP G R R P LS G+ PP
Sbjct: 516 ----AQRTELG------GRVGKGPGAPPSALPGPRPR----PDSLSPGEPPGPPTPPPAR 561
Query: 206 SVDPAVAFSRAA 217
++ AVA +R +
Sbjct: 562 ALPAAVASARCS 573
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 46.2 bits (108), Expect = 4e-05
Identities = 61/213 (28%), Positives = 80/213 (37%), Gaps = 25/213 (11%)
Query: 93 RFRGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVR 152
R GW GAR+ LG + C PG +R P + +R+ LAG+
Sbjct: 397 RREGW------GARA----KLGGRGVCGKCGPGPWDDPARRRNPGAA--ARAKLAGQRAG 444
Query: 153 APQRRVGAGAGWRG---GPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDP 209
+ R G+ G RG GPG G V G R R G + +P L +VDP
Sbjct: 445 RARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDP 504
Query: 210 AVAFSRAADLC---PPVAPAVLEQKG-PPSSRTEPR-APSPMEQASAGVPRLRPGRRALW 264
A R D + V + G PPS+ PR P + P P RAL
Sbjct: 505 ARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTPPPARALP 564
Query: 265 HLFPPPRVPVR-PGRDWLGNRGRKRSQSSKESG 296
R +R PG G R RS+ + G
Sbjct: 565 AAVASARCSLRDPG----GGSARIRSRPGRSGG 593
Score = 30.4 bits (67), Expect = 2.2
Identities = 40/132 (30%), Positives = 51/132 (38%), Gaps = 20/132 (15%)
Query: 92 SRFRGWAPGSRR---GARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAG 148
SR RGW PG+ R G R +P AAA P + +R R P A
Sbjct: 456 SRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAA 515
Query: 149 RSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGK---TLAVPPLV 205
A + +G G G GP PP G R R P LS G+ PP
Sbjct: 516 ----AQRTELG------GRVGKGPGAPPSALPGPRPR----PDSLSPGEPPGPPTPPPAR 561
Query: 206 SVDPAVAFSRAA 217
++ AVA +R +
Sbjct: 562 ALPAAVASARCS 573
>gi|6005997 double C2-like domains, beta [Homo sapiens]
Length = 412
Score = 46.2 bits (108), Expect = 4e-05
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 28 SPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLH 63
SP +PPAKPPEDEPDA+GYE + DF+ L+
Sbjct: 101 SPARPPAKPPEDEPDADGYESDDCTALGTLDFSLLY 136
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 45.8 bits (107), Expect = 5e-05
Identities = 81/278 (29%), Positives = 99/278 (35%), Gaps = 46/278 (16%)
Query: 16 PYLRSLRIQHRSSPVQPPAKP-PEDEPDAEGYEWTIAVSFQLADFAPLHWLRLDDPGF-G 73
P + L +Q P +PP P P EP+ LA+ P H PG G
Sbjct: 1271 PMMLPLPLQPPLPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPH-----TPGLCG 1325
Query: 74 VLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRG 133
L+ V P G + G + +P SP P + S G
Sbjct: 1326 SLAKSQSTETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFS--------YPAPSPSLSSG 1377
Query: 134 DTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRP-PGWRAGRRTRRTAGPGR 192
P R P R + P GP L PV P P R R+ A P
Sbjct: 1378 GLP--RTPGRDFSFTPTFSEPS-----------GPLLLPVCPLPTGRRDERSGPLASPVL 1424
Query: 193 LSFGKTLAVP---PLVSVDPAV--AFSRAADLCPPVAPAVLEQKGPPSSRTEPRAP--SP 245
L G L +P PL PAV A +RA PP+ PA L PP R +P P SP
Sbjct: 1425 LETGLPLPLPLPLPLPLALPAVLRAQARAPTPLPPLLPAPLASCPPPMKR-KPGRPRRSP 1483
Query: 246 MEQASAGVPRLRP------GRRALWHLFP-PPRVPVRP 276
S P +RP GR L L P P+ PV P
Sbjct: 1484 PSMLSLDGPLVRPPAGAALGRELL--LLPGQPQTPVFP 1519
>gi|169172231 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 45.1 bits (105), Expect = 9e-05
Identities = 63/215 (29%), Positives = 81/215 (37%), Gaps = 27/215 (12%)
Query: 98 APGSRRGARSLPASPLG-AQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQR 156
A ++RG+ + A+ L A A+ G G + P R+ R P+ + R R
Sbjct: 29 ARAAQRGSTTFVAASLHRALTLGASSGEGSGRDNNTPPPPPPRRRRRPPVVAATHR---R 85
Query: 157 RVGAGAGWRGGPGLGP---VRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAF 213
R+G+G G PGLGP P GW AGR G RLS G +V
Sbjct: 86 RLGSGLGLTTTPGLGPRALCGPRGWAAGRGEAGATGL-RLSVG-------AATVRGWAGG 137
Query: 214 SRAADLCPPVAPAVLEQKGPPSSRTEPRAPSPMEQAS---AGVPRLR---PGRRALWHLF 267
D V+ +V GP P P P E A + P L PG R L L
Sbjct: 138 YFRGDGGRGVSESVAVGTGPDFLLLSPPPPPPAEVAELPLSSAPPLHEEAPGVRGLPRLA 197
Query: 268 PPPRVPV------RPGRDWLGNRGRKRSQSSKESG 296
PP P+ G WLG S S + G
Sbjct: 198 PPLPSPLLVRRRESNGTCWLGPNLHNPSFSPRSFG 232
>gi|169170975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 45.1 bits (105), Expect = 9e-05
Identities = 63/215 (29%), Positives = 81/215 (37%), Gaps = 27/215 (12%)
Query: 98 APGSRRGARSLPASPLG-AQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQR 156
A ++RG+ + A+ L A A+ G G + P R+ R P+ + R R
Sbjct: 29 ARAAQRGSTTFVAASLHRALTLGASSGEGSGRDNNTPPPPPPRRRRRPPVVAATHR---R 85
Query: 157 RVGAGAGWRGGPGLGP---VRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAF 213
R+G+G G PGLGP P GW AGR G RLS G +V
Sbjct: 86 RLGSGLGLTTTPGLGPRALCGPRGWAAGRGEAGATGL-RLSVG-------AATVRGWAGG 137
Query: 214 SRAADLCPPVAPAVLEQKGPPSSRTEPRAPSPMEQAS---AGVPRLR---PGRRALWHLF 267
D V+ +V GP P P P E A + P L PG R L L
Sbjct: 138 YFRGDGGRGVSESVAVGTGPDFLLLSPPPPPPAEVAELPLSSAPPLHEEAPGVRGLPRLA 197
Query: 268 PPPRVPV------RPGRDWLGNRGRKRSQSSKESG 296
PP P+ G WLG S S + G
Sbjct: 198 PPLPSPLLVRRRESNGTCWLGPNLHNPSFSPRSFG 232
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 43.9 bits (102), Expect = 2e-04
Identities = 66/219 (30%), Positives = 80/219 (36%), Gaps = 36/219 (16%)
Query: 70 PGFGVLSTGPERWEVWGHPLWVSR----FRG-WAPGSRRGARSLPASPLGAQARAAACVP 124
PG L+ GP G+P R + G APG ++ +S P Q R A
Sbjct: 45 PGVTSLAVGP------GNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDA--- 95
Query: 125 GKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRV-GAGAG--WRGGPGLGPVRPP---GW 178
G R P R G RA Q RV GA G RG P P R G
Sbjct: 96 ---GVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGV 152
Query: 179 RAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCP-PVAPAVLEQKGPPSSR 237
R+G R A +L G ++ P A L P P P + + P
Sbjct: 153 RSGAGHRAAAAEHQLGAGFSVRNGP----------GPPARLPPAPPGPLLRPARPPRPYF 202
Query: 238 TEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRP 276
PR P E S +P P R+ W L PPP PVRP
Sbjct: 203 PRPRTPPTCEPPSRKLPPPLPLCRSRWVLAPPP--PVRP 239
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 43.5 bits (101), Expect = 3e-04
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 95 RGWAPGSRRGARSLPASPLGAQARAA---ACVPGKGGAASRGDTPCSRQPSRSPLAGRSV 151
RGW G R++ A+ G RA + ++ TP SR P L +
Sbjct: 64 RGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPG---LRAQER 120
Query: 152 RAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
++ +R G G P + P RP G G R+RR AG G
Sbjct: 121 QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAG 160
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 43.1 bits (100), Expect = 3e-04
Identities = 54/209 (25%), Positives = 71/209 (33%), Gaps = 43/209 (20%)
Query: 95 RGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAP 154
+G A GAR+ P P AQ P R P PL R+ R
Sbjct: 242 KGCAEFYGSGARAQPGGPCWAQG------------------PPGRLPDPIPLPTRAPRTS 283
Query: 155 QRRVGAGAGWRGGP-----GLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDP 209
G G+G G P P P R R+T+R G R G P +
Sbjct: 284 AGLAGVGSGAPGEPAEPGRARAPRSAPSSREPRQTKRRVG-SRARAGAGAVTGPCPAAAQ 342
Query: 210 AVAFSRAADLCPPVAPAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPP 269
S + C P E PP+S PR P+ A A R GRR+L
Sbjct: 343 GARGSWPSPRCLPSDGGARE--APPTSAPHPRRPAGSPPALAD----REGRRSL-----V 391
Query: 270 PRVPVRP--------GRDWLGNRGRKRSQ 290
P+ ++ R W G RG ++ +
Sbjct: 392 PQTSIQGQNFAQLSLARPWAGKRGHRQRE 420
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 97 WAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQR 156
W +RR + P ++R+AA + ++ TP SR P L + ++ +R
Sbjct: 142 WREAARRRPQQCPQWGRARESRSAALASPR--VSNAPTTPASRNPG---LRAQERQSGRR 196
Query: 157 RVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
G G P + P RP G G R+RR AG G
Sbjct: 197 AAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAG 231
Score = 31.6 bits (70), Expect = 1.00
Identities = 54/200 (27%), Positives = 64/200 (32%), Gaps = 38/200 (19%)
Query: 88 PLWVSRFRGWAPGSRRGAR-----SLPASPLGAQARAAACVPGKGG-----AASRGDTPC 137
P V + G A G GAR + PA L + AA G+G A R T
Sbjct: 69 PHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAA 128
Query: 138 SRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGK 197
R + PLAG R RR P + P W R +R A
Sbjct: 129 RRGGASRPLAGEPWREAARR-------------RPQQCPQWGRARESRSAA--------- 166
Query: 198 TLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKGPPSSRTE-PRAPSPMEQASAGVPRL 256
P VS P SR L + G +R E PR P +G R
Sbjct: 167 --LASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRS 224
Query: 257 RPGRRA---LWHLFPPPRVP 273
R A PPPR P
Sbjct: 225 RRAAGAGPRTTRRKPPPRPP 244
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 43.1 bits (100), Expect = 3e-04
Identities = 79/273 (28%), Positives = 93/273 (34%), Gaps = 52/273 (19%)
Query: 6 SRVSRRRGWGPYLRS--LRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLH 63
S RR GP+L L SP +P +PP D PDA G L +
Sbjct: 204 SSAERRARAGPFLTPSPLHAVAMRSP-RPCGRPPTDSPDAGG------AGRPLDGYISAL 256
Query: 64 WLRLDDPGFGVLSTGPERWEVWGHPLWVSRFR------GWAPGSRRGARSL--------P 109
R G G T P + G P + R +PGS R AR P
Sbjct: 257 LRRRRRRGAGQPRTSPGGAD--GGPRRQNSVRQRPPDASPSPGSARPAREPSLERVGGHP 314
Query: 110 ASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPG 169
SP A +RA A A P + P SP GR V+A Q GA A RG PG
Sbjct: 315 TSP-AALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKA-QYIPGAQAATRGLPG 372
Query: 170 LGPVR--------------PPGWR---AGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVA 212
R PP R AGRR R GR + S +
Sbjct: 373 RAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLG 432
Query: 213 FSRAADLCPPVAPAVLEQKGPPSSRTEPRAPSP 245
+ A PP K P + R EPR P P
Sbjct: 433 RASAVPSGPP--------KYPTAEREEPRPPRP 457
Score = 36.2 bits (82), Expect = 0.040
Identities = 62/228 (27%), Positives = 84/228 (36%), Gaps = 29/228 (12%)
Query: 98 APGSRRGARSLPASPLGAQARAAA---CVPGKGGA-ASRGDTPCSRQPSRSPLAGRSVRA 153
AP G + P + A+ RA A P A A R PC R P+ SP AG + R
Sbjct: 189 APYPTAGGSAGPEACSSAERRARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRP 248
Query: 154 PQRRVGAGAGWRGGPGLG-PVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVA 212
+ A R G G P PG G R+ + R A P S PA
Sbjct: 249 LDGYISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVRQR----PPDASPSPGSARPARE 304
Query: 213 FSRAADLCPPVAPAVL--------EQKGPPSSRTEPRAPSPMEQASAG---VPRLRPGRR 261
S P +PA L E + P P APSP + + G + PG +
Sbjct: 305 PSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQ 364
Query: 262 ALWHLFP-------PPRVPVRPGRDWLGNRGRKRSQSSKESGQLFRGS 302
A P PP P+ GR + R+R +++ G++ S
Sbjct: 365 AATRGLPGRAARRKPP--PLTRGRSVEQSPPRERPRAAGRRGRMAEAS 410
Score = 28.9 bits (63), Expect = 6.5
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 70 PGFGVLSTGPERWEVWGHPLWVSRFRGWAPGSRRGARSLPASPLGAQARAAACVPGKG-- 127
PG G + P+R ++G GS + PLG + A G G
Sbjct: 500 PGPGPSPSAPQRRLLYG-----------CAGSDSECSAGRLGPLGRRGPAGGVGGGYGES 548
Query: 128 -GAASRGDTPCSRQPSRSPLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPP 176
+AS G++P S + PQ+ V A A GG G G P
Sbjct: 549 ESSASEGESPAFSSASSDSDGSGGLVWPQQLVAATAASGGGAGAGAPAGP 598
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 4e-04
Identities = 47/151 (31%), Positives = 53/151 (35%), Gaps = 15/151 (9%)
Query: 29 PVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLHWLRLDDPGFGVLSTGPERWEVWGHP 88
P PPA+PP E EG A S P H L L P PE E
Sbjct: 213 PTAPPARPPAYE-SREGPRGR-AESRGSGPAQPAH-LPLPGPAHSPAPPAPELRE----- 264
Query: 89 LWVSRFRGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAG 148
G APGS G R P P A+ A V + G R + S +
Sbjct: 265 -------GRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERC 317
Query: 149 RSVRAPQRRVGAGAGWRGGPGLGPVRPPGWR 179
R R +RR G G G GP PPG R
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRR 348
Score = 34.7 bits (78), Expect = 0.12
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 16/128 (12%)
Query: 174 RPPGWRAGRRTR-RTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKG 232
RPP + + T R G SFG P + + A + PP P E +
Sbjct: 172 RPPVYLGNKPTPPRQEG----SFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESRE 227
Query: 233 PPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGR---DWLGNRGRKRS 289
P R E R P + A +P H PP +R GR G R R R
Sbjct: 228 GPRGRAESRGSGPAQPAHLPLP-------GPAHSPAPPAPELREGRAPGSTAGRRPRPRE 280
Query: 290 -QSSKESG 296
Q+++ESG
Sbjct: 281 PQAAEESG 288
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 4e-04
Identities = 47/151 (31%), Positives = 53/151 (35%), Gaps = 15/151 (9%)
Query: 29 PVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLHWLRLDDPGFGVLSTGPERWEVWGHP 88
P PPA+PP E EG A S P H L L P PE E
Sbjct: 213 PTAPPARPPAYE-SREGPRGR-AESRGSGPAQPAH-LPLPGPAHSPAPPAPELRE----- 264
Query: 89 LWVSRFRGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAG 148
G APGS G R P P A+ A V + G R + S +
Sbjct: 265 -------GRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERC 317
Query: 149 RSVRAPQRRVGAGAGWRGGPGLGPVRPPGWR 179
R R +RR G G G GP PPG R
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRR 348
Score = 34.7 bits (78), Expect = 0.12
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 16/128 (12%)
Query: 174 RPPGWRAGRRTR-RTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKG 232
RPP + + T R G SFG P + + A + PP P E +
Sbjct: 172 RPPVYLGNKPTPPRQEG----SFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESRE 227
Query: 233 PPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGR---DWLGNRGRKRS 289
P R E R P + A +P H PP +R GR G R R R
Sbjct: 228 GPRGRAESRGSGPAQPAHLPLP-------GPAHSPAPPAPELREGRAPGSTAGRRPRPRE 280
Query: 290 -QSSKESG 296
Q+++ESG
Sbjct: 281 PQAAEESG 288
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 4e-04
Identities = 47/151 (31%), Positives = 53/151 (35%), Gaps = 15/151 (9%)
Query: 29 PVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLHWLRLDDPGFGVLSTGPERWEVWGHP 88
P PPA+PP E EG A S P H L L P PE E
Sbjct: 213 PTAPPARPPAYE-SREGPRGR-AESRGSGPAQPAH-LPLPGPAHSPAPPAPELRE----- 264
Query: 89 LWVSRFRGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAG 148
G APGS G R P P A+ A V + G R + S +
Sbjct: 265 -------GRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERC 317
Query: 149 RSVRAPQRRVGAGAGWRGGPGLGPVRPPGWR 179
R R +RR G G G GP PPG R
Sbjct: 318 RFCRRRRRRGGGGEGEGTHATHGPASPPGRR 348
Score = 34.7 bits (78), Expect = 0.12
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 16/128 (12%)
Query: 174 RPPGWRAGRRTR-RTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADLCPPVAPAVLEQKG 232
RPP + + T R G SFG P + + A + PP P E +
Sbjct: 172 RPPVYLGNKPTPPRQEG----SFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESRE 227
Query: 233 PPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGR---DWLGNRGRKRS 289
P R E R P + A +P H PP +R GR G R R R
Sbjct: 228 GPRGRAESRGSGPAQPAHLPLP-------GPAHSPAPPAPELREGRAPGSTAGRRPRPRE 280
Query: 290 -QSSKESG 296
Q+++ESG
Sbjct: 281 PQAAEESG 288
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.7 bits (99), Expect = 4e-04
Identities = 53/190 (27%), Positives = 69/190 (36%), Gaps = 25/190 (13%)
Query: 99 PGSRRGARSLPASPLGAQAR------AAACVPGKGGAA-SRGDTPCSRQPSRSPLAGRSV 151
P RR +P A+ R A +C P AA + G P P++ AG +
Sbjct: 108 PSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKP--AGPAA 165
Query: 152 RAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAV 211
A + G G G GPG GP +P G A + +A AV LV+ PA
Sbjct: 166 LAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAV-SLVNNGPAA 224
Query: 212 AFSRAADLCPPVAPAVLEQKGP---PSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFP 268
L P AP + Q P ++ P APSP + P P P
Sbjct: 225 LL----PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPP--------P 272
Query: 269 PPRVPVRPGR 278
PP P R
Sbjct: 273 PPPAPATLAR 282
Score = 37.7 bits (86), Expect = 0.014
Identities = 45/156 (28%), Positives = 55/156 (35%), Gaps = 22/156 (14%)
Query: 135 TPCSRQPSRSPLAGRSVR-APQRRVGAG--AGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
TP R + L V +P GAG A G PG P PP RA R G G
Sbjct: 47 TPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRA-----RPGGGG 101
Query: 192 RLSFGKTLAVPPLVSVDPAVAFSR-------AADLCPPVAPAVLEQKGP---PSSRTEPR 241
G PLV PA ++ +A C PV A GP P+ +P
Sbjct: 102 PQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPA 161
Query: 242 APSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPG 277
P+ + + P PG P P P PG
Sbjct: 162 GPAALAARAGPGPGPGPGPGP----GPGPGKPAGPG 193
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 42.4 bits (98), Expect = 6e-04
Identities = 46/115 (40%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 92 SRFRGWAPGSRRGARSLPASPLGAQARAAA-CVPGKGGAASRGDTPCSR---------QP 141
SR R APG R G S ASP A +AAA PG+ AAS G P SR +P
Sbjct: 117 SRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGR--AASGGSGPGSRGQGSDQVGARP 174
Query: 142 SRS-----PLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
SR+ PL R RA RR A PGL PG G R+ T G G
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRR---SARPFRRPGLPLKSRPGSGTGARSCGTWGSG 226
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 42.4 bits (98), Expect = 6e-04
Identities = 46/115 (40%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 92 SRFRGWAPGSRRGARSLPASPLGAQARAAA-CVPGKGGAASRGDTPCSR---------QP 141
SR R APG R G S ASP A +AAA PG+ AAS G P SR +P
Sbjct: 117 SRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGR--AASGGSGPGSRGQGSDQVGARP 174
Query: 142 SRS-----PLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
SR+ PL R RA RR A PGL PG G R+ T G G
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRR---SARPFRRPGLPLKSRPGSGTGARSCGTWGSG 226
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 42.4 bits (98), Expect = 6e-04
Identities = 46/115 (40%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 92 SRFRGWAPGSRRGARSLPASPLGAQARAAA-CVPGKGGAASRGDTPCSR---------QP 141
SR R APG R G S ASP A +AAA PG+ AAS G P SR +P
Sbjct: 117 SRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGR--AASGGSGPGSRGQGSDQVGARP 174
Query: 142 SRS-----PLAGRSVRAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
SR+ PL R RA RR A PGL PG G R+ T G G
Sbjct: 175 SRAGGQPPPLTCRRCRAAPRR---SARPFRRPGLPLKSRPGSGTGARSCGTWGSG 226
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 42.0 bits (97), Expect = 7e-04
Identities = 66/227 (29%), Positives = 78/227 (34%), Gaps = 53/227 (23%)
Query: 96 GWAPGS-------RRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAG 148
GWA G R G L +GA R AC P +GG RG P R R LA
Sbjct: 506 GWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGI--RGGRPLERADDRVLLA- 562
Query: 149 RSVRAPQRRVGAGAGWR---------GGPGLGPV-----RPPGWRAGRRTRRTAGP---- 190
+++ QR GAG + GPG+ + P G R GP
Sbjct: 563 QALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGA 622
Query: 191 --GRLSFGKTLAVPPLVSV---DPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEPRAPSP 245
G G+ VSV A + RAA L PP PA G P+S P
Sbjct: 623 GGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPP-RPASATSAGSPTSPAPPLHMVS 681
Query: 246 MEQASA------------------GVPR-LRPGRRALWHLFPPPRVP 273
+ SA G PR RP RA W PR P
Sbjct: 682 TDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGP 728
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 42.0 bits (97), Expect = 7e-04
Identities = 66/227 (29%), Positives = 78/227 (34%), Gaps = 53/227 (23%)
Query: 96 GWAPGS-------RRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAG 148
GWA G R G L +GA R AC P +GG RG P R R LA
Sbjct: 506 GWAAGRTLAGPRVRLGLEQLLGRHVGAGVRGGACGPHRGGI--RGGRPLERADDRVLLA- 562
Query: 149 RSVRAPQRRVGAGAGWR---------GGPGLGPV-----RPPGWRAGRRTRRTAGP---- 190
+++ QR GAG + GPG+ + P G R GP
Sbjct: 563 QALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDGPRALVEGLHGRHEGGPLGGA 622
Query: 191 --GRLSFGKTLAVPPLVSV---DPAVAFSRAADLCPPVAPAVLEQKGPPSSRTEPRAPSP 245
G G+ VSV A + RAA L PP PA G P+S P
Sbjct: 623 GGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPP-RPASATSAGSPTSPAPPLHMVS 681
Query: 246 MEQASA------------------GVPR-LRPGRRALWHLFPPPRVP 273
+ SA G PR RP RA W PR P
Sbjct: 682 TDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGP 728
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 42.0 bits (97), Expect = 7e-04
Identities = 65/231 (28%), Positives = 80/231 (34%), Gaps = 49/231 (21%)
Query: 96 GWAPGSRRGARSL---PASPLGAQARAA----------ACVPGKGGAASRGDTPCSRQPS 142
GW P R +L PA LG + A PG+ ++S G P R P
Sbjct: 638 GWDPEGRGAGETLAGDPAEVLGERGTAPWVEEEEEEEEGSSPGED-SSSLGGGPSRRGPL 696
Query: 143 RSPLAGRSVRA---PQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTL 199
PL R P R A AGW G P LG PP + R R G L+ L
Sbjct: 697 PCPLCSREGACSCLPLERGDAVAGWGGHPALGCPHPPEDDSSLRAER----GSLA---DL 749
Query: 200 AVPPLVSVDPAVAFSRAADLCPPVAPAVLEQ---KGPPSSRTEPRAPSPMEQASAGVPRL 256
+ P S P + P+ A Q +GPP + P P P +A A P
Sbjct: 750 PMAPPASAPP--------EFLDPLMGAAAPQYPGRGPPPA---PPPPPPPPRAPAD-PAA 797
Query: 257 RPGRRALWHLFPPPRVPVRPGRDWLGNRGRKRSQSSKESGQLFRGSLQTPG 307
P PP PG L + G K S E+ F PG
Sbjct: 798 SP---------DPPSAVASPG-SGLSSPGPKPGDSGYETETPFSPEGAFPG 838
Score = 35.0 bits (79), Expect = 0.090
Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 21/137 (15%)
Query: 101 SRRGARSLPASPLGAQARAAACVPG-KGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVG 159
SR G + P PLG + PG + A G P + R L G RAP VG
Sbjct: 1093 SRNGGETAPG-PLGPAPKNGTLEPGTERRAPETGGAPRAPGAGRLDL-GSGGRAP---VG 1147
Query: 160 AGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADL 219
G GGPG G GW R + P +PP P A R +
Sbjct: 1148 TGTAPGGGPGSGVDAKAGWVDNTRPQPPPPP----------LPP-----PPEAQPRRLEP 1192
Query: 220 CPPVAPAVLEQKGPPSS 236
PP A + +G P +
Sbjct: 1193 APPRARPEVAPEGEPGA 1209
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 41.6 bits (96), Expect = 0.001
Identities = 51/187 (27%), Positives = 67/187 (35%), Gaps = 34/187 (18%)
Query: 98 APGSRRGARSLPASPLGAQARAAA--------CVPGKGGAASRGDTPCSRQPSRSPLAGR 149
AP +R P P GA++ A P G A + P S +R GR
Sbjct: 1154 APPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGR 1213
Query: 150 SVRAPQRRVGAGAGWRGGPGLGPVRPP--GWRAGRRTRRTAGPGRL-----------SFG 196
S +PQ + AG G G P PP G + ++ A GRL S G
Sbjct: 1214 SQPSPQAGL-AGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKG 1272
Query: 197 KTLAVPPLVSVDPAVAFSRAADLCPPV---------APAVLEQKGPPSSRTEPRAPSPME 247
T PL P AF + L PP A + Q GP + P P P
Sbjct: 1273 STFLPEPL---KPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRS 1329
Query: 248 QASAGVP 254
++S +P
Sbjct: 1330 RSSHSLP 1336
Score = 37.0 bits (84), Expect = 0.024
Identities = 45/157 (28%), Positives = 56/157 (35%), Gaps = 22/157 (14%)
Query: 171 GPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVP--PLVSVDPAVAFSRAAD-----LCPPV 223
GPV R R RT GP A P PL DPA + PP
Sbjct: 1098 GPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPT 1157
Query: 224 APAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGN 283
PA ++ PPS P AP+ E G P P P+ P +D +G
Sbjct: 1158 RPAPPQRPPPPSGARSP-APTRKEFGGIGAP---PSPGVARREMEAPKSPGTTRKDNIG- 1212
Query: 284 RGRKRSQSSKESGQLFRGSLQTPGQARKHLYGPSLCP 320
RSQ S ++G L PG A P++ P
Sbjct: 1213 ----RSQPSPQAG------LAGPGPAGYSTARPTIPP 1239
Score = 36.6 bits (83), Expect = 0.031
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 222 PVAPAVLEQK--GPPSSRTEP---RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRP 276
P+ P+ + GPPS+++ P + +P+ Q P L P R PP P P
Sbjct: 1104 PIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQP-LEPKRPPPPRPVAPPTRPAPP 1162
Query: 277 GRDWLGNRGRKRSQSSKESGQLFRGSLQTPGQARKHLYGPSLCPTTR 323
R + R + + KE G + G+ +PG AR+ + P TTR
Sbjct: 1163 QRPPPPSGARSPAPTRKEFGGI--GAPPSPGVARREMEAPKSPGTTR 1207
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 41.6 bits (96), Expect = 0.001
Identities = 51/187 (27%), Positives = 67/187 (35%), Gaps = 34/187 (18%)
Query: 98 APGSRRGARSLPASPLGAQARAAA--------CVPGKGGAASRGDTPCSRQPSRSPLAGR 149
AP +R P P GA++ A P G A + P S +R GR
Sbjct: 1154 APPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGR 1213
Query: 150 SVRAPQRRVGAGAGWRGGPGLGPVRPP--GWRAGRRTRRTAGPGRL-----------SFG 196
S +PQ + AG G G P PP G + ++ A GRL S G
Sbjct: 1214 SQPSPQAGL-AGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKG 1272
Query: 197 KTLAVPPLVSVDPAVAFSRAADLCPPV---------APAVLEQKGPPSSRTEPRAPSPME 247
T PL P AF + L PP A + Q GP + P P P
Sbjct: 1273 STFLPEPL---KPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRS 1329
Query: 248 QASAGVP 254
++S +P
Sbjct: 1330 RSSHSLP 1336
Score = 37.0 bits (84), Expect = 0.024
Identities = 45/157 (28%), Positives = 56/157 (35%), Gaps = 22/157 (14%)
Query: 171 GPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVP--PLVSVDPAVAFSRAAD-----LCPPV 223
GPV R R RT GP A P PL DPA + PP
Sbjct: 1098 GPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPT 1157
Query: 224 APAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRPGRDWLGN 283
PA ++ PPS P AP+ E G P P P+ P +D +G
Sbjct: 1158 RPAPPQRPPPPSGARSP-APTRKEFGGIGAP---PSPGVARREMEAPKSPGTTRKDNIG- 1212
Query: 284 RGRKRSQSSKESGQLFRGSLQTPGQARKHLYGPSLCP 320
RSQ S ++G L PG A P++ P
Sbjct: 1213 ----RSQPSPQAG------LAGPGPAGYSTARPTIPP 1239
Score = 36.6 bits (83), Expect = 0.031
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 222 PVAPAVLEQK--GPPSSRTEP---RAPSPMEQASAGVPRLRPGRRALWHLFPPPRVPVRP 276
P+ P+ + GPPS+++ P + +P+ Q P L P R PP P P
Sbjct: 1104 PIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQP-LEPKRPPPPRPVAPPTRPAPP 1162
Query: 277 GRDWLGNRGRKRSQSSKESGQLFRGSLQTPGQARKHLYGPSLCPTTR 323
R + R + + KE G + G+ +PG AR+ + P TTR
Sbjct: 1163 QRPPPPSGARSPAPTRKEFGGI--GAPPSPGVARREMEAPKSPGTTR 1207
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 41.6 bits (96), Expect = 0.001
Identities = 60/216 (27%), Positives = 75/216 (34%), Gaps = 57/216 (26%)
Query: 100 GSRRGARSLPASPLGAQARAAACVPGKGGAASRGDTPCSRQPSRSPLAGRSVRAPQRRVG 159
GSRR RSLPA G R A P G AS G S ++S ++A
Sbjct: 25 GSRREPRSLPAG--GPAPRRTA--PPPPGHASAGPAAMSSHIAKSESKTSLLKA---AAA 77
Query: 160 AGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPGRLSFGKTLAVPPLVSVDPAVAFSRAADL 219
A +G P GP R PG + R
Sbjct: 78 AASGGSRAPRHGPARDPGLPSRR------------------------------------- 100
Query: 220 CPPVAPAVLEQKGPPSSRTEPRAPSPMEQASAGVPRLRP-----GRRALWHLF--PPPRV 272
P PA + G PSSR P+P E+ + G R+ P R AL P P
Sbjct: 101 LPGSCPATPQSSGDPSSRRPLCRPAPREEGARGSQRVLPQAHCRPREALPAAASRPSPSS 160
Query: 273 PVRPGRDWLGNRGRKRSQSSKESGQLFRGSLQTPGQ 308
P+ P R G G +R S RGSL+ G+
Sbjct: 161 PLPPAR---GRDGEERGLSPALG---LRGSLRARGR 190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,787,378
Number of Sequences: 37866
Number of extensions: 1119728
Number of successful extensions: 7443
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 650
Number of HSP's that attempted gapping in prelim test: 6444
Number of HSP's gapped (non-prelim): 1524
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.