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Search of human proteins with 239745668
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo
sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo ... 620 e-178
gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo ... 563 e-161
gi|239756683 PREDICTED: hypothetical protein [Homo sapiens] 226 1e-59
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 39 0.006
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 38 0.010
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 36 0.037
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 36 0.037
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 36 0.037
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.063
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 35 0.083
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 35 0.11
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.14
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 34 0.18
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 33 0.31
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 33 0.31
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 33 0.31
gi|157694497 zinc finger and BTB domain containing 10 isoform b ... 33 0.31
gi|157694499 zinc finger and BTB domain containing 10 isoform a ... 33 0.31
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 33 0.41
gi|188536004 zinc finger protein 469 [Homo sapiens] 32 0.70
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 32 0.70
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 0.70
gi|10092691 tight junction protein 3 [Homo sapiens] 32 0.70
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 32 0.70
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 32 0.70
gi|150170699 kinesin family member 26A [Homo sapiens] 32 0.70
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 0.70
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 32 0.70
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 32 0.70
gi|239746493 PREDICTED: hypothetical protein XP_002343745 [Homo ... 32 0.91
>gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo
sapiens]
Length = 305
Score = 620 bits (1599), Expect = e-178
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MLGARGDGDGAKQKGSTRACNHVFGPGLNPQALLALDCFPPSILFLNACFFPPFVHLHKS 60
MLGARGDGDGAKQKGSTRACNHVFGPGLNPQALLALDCFPPSILFLNACFFPPFVHLHKS
Sbjct: 1 MLGARGDGDGAKQKGSTRACNHVFGPGLNPQALLALDCFPPSILFLNACFFPPFVHLHKS 60
Query: 61 SCVYVRGALAAVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQ 120
SCVYVRGALAAVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQ
Sbjct: 61 SCVYVRGALAAVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQ 120
Query: 121 APGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFV 180
APGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFV
Sbjct: 121 APGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFV 180
Query: 181 ILLPLLQLPLQLAPVADQGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQK 240
ILLPLLQLPLQLAPVADQGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQK
Sbjct: 181 ILLPLLQLPLQLAPVADQGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQK 240
Query: 241 QRLLQKGEERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKAT 300
QRLLQKGEERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKAT
Sbjct: 241 QRLLQKGEERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKAT 300
Query: 301 VGIRP 305
VGIRP
Sbjct: 301 VGIRP 305
>gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo
sapiens]
Length = 331
Score = 563 bits (1450), Expect = e-161
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 28 LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE 87
LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE
Sbjct: 54 LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE 113
Query: 88 NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGA 147
NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGA
Sbjct: 114 NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGA 173
Query: 148 LSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRA 207
LSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRA
Sbjct: 174 LSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRA 233
Query: 208 DLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGD 267
DLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGD
Sbjct: 234 DLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGD 293
Query: 268 LHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 305
LHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP
Sbjct: 294 LHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 331
>gi|239756683 PREDICTED: hypothetical protein [Homo sapiens]
Length = 247
Score = 226 bits (577), Expect = 1e-59
Identities = 110/117 (94%), Positives = 110/117 (94%)
Query: 189 PLQLAPVADQGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGE 248
PL QGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGE
Sbjct: 131 PLNPLQGISQGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGE 190
Query: 249 ERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 305
ERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP
Sbjct: 191 ERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 247
Score = 181 bits (460), Expect = 5e-46
Identities = 90/96 (93%), Positives = 91/96 (94%), Gaps = 2/96 (2%)
Query: 28 LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE 87
LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE
Sbjct: 54 LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE 113
Query: 88 NVSAALALGEEARGPPSPLNPLQGISQ--APQRPQA 121
NVSAALALGEEARGPPSPLNPLQGISQ PQ +A
Sbjct: 114 NVSAALALGEEARGPPSPLNPLQGISQGLGPQETRA 149
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 38.9 bits (89), Expect = 0.006
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 71 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 130
A+L S NE S+ S +L G PP N QG P +PQ P P+G Q
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQG-GNQ 67
Query: 131 SQGSP 135
QG P
Sbjct: 68 PQGPP 72
Score = 33.9 bits (76), Expect = 0.18
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 79 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
G +GD+++ SA G+ PP N QG P +PQ P P+G + QG P
Sbjct: 223 GPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQGPP 278
Score = 32.3 bits (72), Expect = 0.54
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 79 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
G +GD+++ S+ G+ PP N QG P +PQ P P+G + QG P
Sbjct: 161 GPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQGPP 216
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 79 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
G +G S++ S+ G+ PP N QG P +PQ P P+G + QG P
Sbjct: 285 GPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQGPP 340
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 96 GEEARGPPSPLNPLQGIS-QAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVS 145
G + +GPP P QG Q +PQ P P G + QG P K+R S
Sbjct: 126 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGDNKSRSS 173
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG + +G G+ PP N Q P +PQ P P+G Q QG P
Sbjct: 206 PQGGNKPQGPPPP-------GKPQGPPPQGDNKSQSARSPPGKPQGPPPQG-GNQPQGPP 257
Score = 28.9 bits (63), Expect = 5.9
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 15/74 (20%)
Query: 76 PSGGRQNEGDSENVSAALAL----GEEARGPPSPLNPL----QGISQA------PQRPQA 121
P GG Q +G G + +GPP P P QG S++ P +PQ
Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG 306
Query: 122 PGPRGAAEQSQGSP 135
P P+G Q QG P
Sbjct: 307 PPPQG-GNQPQGPP 319
Score = 28.9 bits (63), Expect = 5.9
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 97 EEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 133
+E P P P G Q PQ P A P+G QG
Sbjct: 372 QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQG 408
Score = 28.5 bits (62), Expect = 7.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 96 GEEARGPPSPLNPLQGIS-QAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVS 145
G + +GPP P QG Q +PQ P P G + QG P K+R S
Sbjct: 250 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGGSKSRSS 297
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 38.1 bits (87), Expect = 0.010
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 42/200 (21%)
Query: 7 DGDGAKQKGSTRACNHVFGPGLNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVR 66
DG + GS+ + L P + +L +L ++ P VH S V
Sbjct: 698 DGSVPRYSGSSSSTRTQASGNLRPPSSGSLPS--QDLLGTSSATVTPAVHSDFVSGVSPH 755
Query: 67 GALAAVLKFPSGGRQ--------NEGDSENVSAALALGEEARGPPSPLNPL--------Q 110
A +A +G R + DS + S A +LGEEAR P P +PL Q
Sbjct: 756 NAPSAGWAGDAGSRTCSPAPIPPHTSDSCSKSGAASLGEEARDTPQPSSPLVLQVGRPEQ 815
Query: 111 G---------ISQAPQRPQAPGPRGAAEQS------------QGSPCVRQEKTRVSGALS 149
G SQ +P RG + ++ +G PC ++ R S S
Sbjct: 816 GAVGPHRSHCCSQPGTQPAQEAQRGPSPEASWLCGRYCPTPPRGRPCPQR---RSSSCGS 872
Query: 150 RPSTTELRGRAPGGSVNAGT 169
S+ + R PGGS GT
Sbjct: 873 TGSSHQSTARGPGGSPQEGT 892
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.037
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 99 ARGPPSPLN--PLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 154
A G P P++ P G+ + PQ+P PGP GA Q R V G+ SRP+ T
Sbjct: 53 ALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQD------RAPSAHVPGSASRPTAT 104
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.037
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 99 ARGPPSPLN--PLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 154
A G P P++ P G+ + PQ+P PGP GA Q R V G+ SRP+ T
Sbjct: 53 ALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQD------RAPSAHVPGSASRPTAT 104
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.037
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 99 ARGPPSPLN--PLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 154
A G P P++ P G+ + PQ+P PGP GA Q R V G+ SRP+ T
Sbjct: 53 ALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQD------RAPSAHVPGSASRPTAT 104
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.4 bits (80), Expect = 0.063
Identities = 37/125 (29%), Positives = 48/125 (38%), Gaps = 19/125 (15%)
Query: 78 GGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCV 137
GG Q S+A L AR PS +G +AP P P P+G Q+ P V
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSA----RGTPRAPAHPSQPKPKGL--QALRPPQV 285
Query: 138 RQEKTRVSGALSRPSTTELRGRAPGGSV--------NAGTETAKVLGEEFVILLPLLQLP 189
+ + AL S++ L +P G+ NA T L P L P
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPS-----PPLATP 340
Query: 190 LQLAP 194
L LAP
Sbjct: 341 LPLAP 345
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 35.0 bits (79), Expect = 0.083
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 96 GEEARGPPSPLNPLQGISQAP--QRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPST 153
G AR P PL + + Q+P +RP+A G RG ++ G R+ R A S
Sbjct: 372 GRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASG----RRGSPRARKASRSQSE 427
Query: 154 TELRGRA 160
T L GRA
Sbjct: 428 TSLLGRA 434
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 34.7 bits (78), Expect = 0.11
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G + G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 167 PQGGNQSQGPPPHP------GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 219
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 83 PQGGNQSQGPPPRP------GKPEGQPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 135
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 104 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 156
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 125 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 177
Score = 33.9 bits (76), Expect = 0.18
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 146 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG-GNQSQGPP 198
Score = 32.7 bits (73), Expect = 0.41
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 79 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
GR+ +G ++ G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 38 GRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 93
Score = 31.2 bits (69), Expect = 1.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G G+ PP N QG P +P+ P+G QSQG P
Sbjct: 62 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPRPGKPEGQPPQG-GNQSQGPP 114
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 34.3 bits (77), Expect = 0.14
Identities = 32/117 (27%), Positives = 45/117 (38%), Gaps = 6/117 (5%)
Query: 78 GGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCV 137
GG Q S+A L AR PS +G +AP P P P+G Q+ P V
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSA----RGTPRAPAHPSQPKPKGL--QALRPPQV 285
Query: 138 RQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAP 194
+ + AL S++ L +P ++ + L L PL LAP
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAP 342
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 33.9 bits (76), Expect = 0.18
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G + G+ R PP N QG P +P+ P P+G + + P
Sbjct: 83 PQGGNQSQGPPPHP------GKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPP 136
Score = 33.5 bits (75), Expect = 0.24
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G G+ PP N QG P +P+ P P+G QSQG+P
Sbjct: 62 PQGGNQSQGPPPPP------GKPEGRPPQGGNQSQGPPPHPGKPERPPPQG-GNQSQGTP 114
Score = 30.8 bits (68), Expect = 1.6
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
P GG Q++G G+ R PP N P +P+ P P+G QSQG P
Sbjct: 104 PQGGNQSQGTPPPP------GKPERPPPQGGNQSHRPPPPPGKPERPPPQG-GNQSQGPP 156
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 71 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 130
A+L S +E S+ S L G+ P N Q P +PQ P P+G Q
Sbjct: 9 ALLALSSAESSSEDVSQEESLFLISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQG-GNQ 67
Query: 131 SQGSP 135
SQG P
Sbjct: 68 SQGPP 72
Score = 28.9 bits (63), Expect = 5.9
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 79 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 135
GR+ +G ++ G+ PP N QG P +P+ P+G QSQG P
Sbjct: 38 GRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQG-GNQSQGPP 93
Score = 28.5 bits (62), Expect = 7.7
Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 76 PSGGRQNEGDSENVSAALA-------LGEEARGPPS-PLNPLQGISQAPQRPQAPGPRGA 127
P GG Q++G + AR PP P P Q PQ P PG
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQG 205
Query: 128 AEQSQGSPCVRQEKTRVSGALSRPSTTELRGRAP 161
+ G+P +Q + +G P GR P
Sbjct: 206 PPPAGGNP--QQPQAPPAGKPQGPPPPPQGGRPP 237
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 33.1 bits (74), Expect = 0.31
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 71 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 130
A+L S NE S+ S +L G P N QG P +PQ P P+G +
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQG-GNK 67
Query: 131 SQGSP 135
QG P
Sbjct: 68 PQGPP 72
Score = 29.3 bits (64), Expect = 4.5
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 79 GRQNEGDSENVSAALALG-------EEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQS 131
G +G S++ SA G +E P P P G Q PQ P A P+G
Sbjct: 262 GPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 321
Query: 132 QG 133
QG
Sbjct: 322 QG 323
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 33.1 bits (74), Expect = 0.31
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 71 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 130
A+L S NE S+ S +L G P N QG P +PQ P P+G +
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQG-GNK 67
Query: 131 SQGSP 135
QG P
Sbjct: 68 PQGPP 72
Score = 30.8 bits (68), Expect = 1.6
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 76 PSGGRQN----EGDSENVSAALALG-------EEARGPPSPLNPLQGISQAPQRPQAPGP 124
P GG+ +G S++ SA G +E P P P G Q PQ P A P
Sbjct: 102 PQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQP 161
Query: 125 RGAAEQSQG 133
+G QG
Sbjct: 162 QGPPRPPQG 170
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 33.1 bits (74), Expect = 0.31
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 71 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 130
A+L S NE S+ S +L G P N QG P +PQ P P+G +
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQG-GNK 67
Query: 131 SQGSP 135
QG P
Sbjct: 68 PQGPP 72
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 76 PSGGRQNEGDSE--NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 133
P GG + +G G+++R P SP QG +PQ P P+G + QG
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQG-GNKPQG 120
Query: 134 SP 135
P
Sbjct: 121 PP 122
Score = 29.3 bits (64), Expect = 4.5
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 79 GRQNEGDSENVSAALALG-------EEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQS 131
G +G S++ SA G +E P P P G Q PQ P A P+G
Sbjct: 129 GPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 188
Query: 132 QG 133
QG
Sbjct: 189 QG 190
>gi|157694497 zinc finger and BTB domain containing 10 isoform b
[Homo sapiens]
Length = 847
Score = 33.1 bits (74), Expect = 0.31
Identities = 59/236 (25%), Positives = 83/236 (35%), Gaps = 28/236 (11%)
Query: 73 LKFPSGG--RQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 130
L F GG + G S N +A GE + PP P P Q AP Q P RGA E+
Sbjct: 11 LAFRGGGLVTASGGGSTNNNAG---GEASAWPPQP-QPRQPPPPAPPALQPPNGRGADEE 66
Query: 131 SQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPL 190
+ Q+ +G + + P +AG T+ G +L + L
Sbjct: 67 VELEGLEPQDLEASAGPAAGAAEEAKELLLP---QDAGGPTSLGGGAGGPLLAERNRRTL 123
Query: 191 QLAPVADQGL---GPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKG 247
GL G R + ++W F G E +LE + L+Q G
Sbjct: 124 AFRGGGGGGLGNNGSSRGRPETSVWPLRHFNGRGPATVDLELDALE------GKELMQDG 177
Query: 248 EERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGI 303
+D E A LG G SG + S + G D G+E G+
Sbjct: 178 ASLSDSTEDEEEGASLGDG----------SGAEGGSCSSSRRSGGDGGDEVEGSGV 223
>gi|157694499 zinc finger and BTB domain containing 10 isoform a
[Homo sapiens]
Length = 871
Score = 33.1 bits (74), Expect = 0.31
Identities = 59/236 (25%), Positives = 83/236 (35%), Gaps = 28/236 (11%)
Query: 73 LKFPSGG--RQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 130
L F GG + G S N +A GE + PP P P Q AP Q P RGA E+
Sbjct: 11 LAFRGGGLVTASGGGSTNNNAG---GEASAWPPQP-QPRQPPPPAPPALQPPNGRGADEE 66
Query: 131 SQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPL 190
+ Q+ +G + + P +AG T+ G +L + L
Sbjct: 67 VELEGLEPQDLEASAGPAAGAAEEAKELLLP---QDAGGPTSLGGGAGGPLLAERNRRTL 123
Query: 191 QLAPVADQGL---GPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKG 247
GL G R + ++W F G E +LE + L+Q G
Sbjct: 124 AFRGGGGGGLGNNGSSRGRPETSVWPLRHFNGRGPATVDLELDALE------GKELMQDG 177
Query: 248 EERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGI 303
+D E A LG G SG + S + G D G+E G+
Sbjct: 178 ASLSDSTEDEEEGASLGDG----------SGAEGGSCSSSRRSGGDGGDEVEGSGV 223
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 32.7 bits (73), Expect = 0.41
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 17/85 (20%)
Query: 96 GEEARGPPSPLNPLQ----------GISQAPQRPQA-----PGPRGAAEQSQGSPCVRQE 140
G+EARG SP + Q G + P P A PGP G+ S G+P
Sbjct: 462 GDEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPL 521
Query: 141 KTRVSGALSRPSTTELRGRAPGGSV 165
T + P TT +PGG V
Sbjct: 522 HTPRASPTGTPGTTP--PPSPGGGV 544
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 32.0 bits (71), Expect = 0.70
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 66 RGALAAVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQ--GISQAPQR-PQAP 122
RG ++ G R++E +A +EA G +P NP + G P R PQA
Sbjct: 1089 RGEKRKEVELTQGPREDEPQKPRKAAR----QEAGGDGAPANPEEPGGSRPGPGRSPQAR 1144
Query: 123 GP-----RGAAEQSQGSPCVRQEKTRVSGALSRPSTTE 155
GP GAA + G C + L P+ TE
Sbjct: 1145 GPSRSLETGAAAREGGPKCADRPSVAPKDPLQVPTNTE 1182
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 32.0 bits (71), Expect = 0.70
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 95 LGEEARGPPSPLNP--LQGISQAPQRPQAPGPRGAAEQSQGSP 135
+G GPP P+ +QG++ P +P PGP+G Q+ P
Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQP 662
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 32.0 bits (71), Expect = 0.70
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 94 ALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPST 153
+L E +G P L+P + AP P P QGSPC QE+ R A + P+
Sbjct: 1143 SLASELKGSPVLLDPEE---LAPVTPMEVYPECKQTAGQGSPCEEQEEPRAPVAPTPPTL 1199
Query: 154 TELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLP 189
+ +++ G +A G E PLL P
Sbjct: 1200 IKSDIVNEISNLSQGDASASFPGSE-----PLLGSP 1230
>gi|10092691 tight junction protein 3 [Homo sapiens]
Length = 952
Score = 32.0 bits (71), Expect = 0.70
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 82 NEGDSENVSAALALGEEARGPPSPLNPLQG-ISQAPQRPQAPGPRGAAEQSQG------- 133
++ DS + + + +E PP+ ++ L +SQAP P PR A +
Sbjct: 303 SDSDSSPLEEGVTMADEMSSPPADISDLASELSQAPPSHIPPPPRHAQRSPEASQTDSPV 362
Query: 134 -SPCVRQEKTRVSGALSRPSTTELRGRAP 161
SP +R+E + S +S P E R P
Sbjct: 363 ESPRLRRESSVDSRTISEPD--EQRSELP 389
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 32.0 bits (71), Expect = 0.70
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 95 LGEEARGPPSPLNP--LQGISQAPQRPQAPGPRGAAEQSQGSP 135
+G GPP P+ +QG++ P +P PGP+G Q+ P
Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQP 662
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 32.0 bits (71), Expect = 0.70
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 95 LGEEARGPPSPLNP--LQGISQAPQRPQAPGPRGAAEQSQGSP 135
+G GPP P+ +QG++ P +P PGP+G Q+ P
Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQP 662
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 32.0 bits (71), Expect = 0.70
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 87 ENVSAALALGEEARGPPSPLNPLQGIS-QAPQRPQAPGPRGAAEQSQGSPC--------- 136
E ++ + + G EA G P P G+ +P AP R A ++ G+P
Sbjct: 1442 EGLAHSSSKGREAPGRPPRAVPKLGVPPSSPTHGPAPACRSGAAKAVGAPKPPVGGGKGR 1501
Query: 137 -VRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLG 176
+ +R G + ST + GR+PGG V AG A G
Sbjct: 1502 GLVAGGSRALGPSVKLSTASVTGRSPGGPV-AGPRAAPRAG 1541
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.0 bits (71), Expect = 0.70
Identities = 51/169 (30%), Positives = 64/169 (37%), Gaps = 29/169 (17%)
Query: 41 PSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALALGEEAR 100
P+ A F P V +S + ALA GG Q EG+ E L+L E
Sbjct: 667 PAAFTSEATHFKPIVLAQNASVARDQPALAQEESEERGG-QREGEGEE---KLSL-EAHA 721
Query: 101 GPPSPLNPLQGISQAPQRPQAPGPRGAAEQ---SQGSPC--VRQEKTRVSGALSRPSTTE 155
G PS P + + AP P GA+ Q +QG PC + + GA S
Sbjct: 722 GSPSLKTPDGPVPGPGPQGAAPEPLGASVQRDSAQGRPCPPPQAPANQPEGASS------ 775
Query: 156 LRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAP--VADQGLGP 202
APG V A A LP+ Q P + P VA GL P
Sbjct: 776 ---AAPGSPVPAPPTKASA--------LPVEQGPAEPIPPGVASGGLRP 813
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 32.0 bits (71), Expect = 0.70
Identities = 18/58 (31%), Positives = 22/58 (37%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 133
PS G N+ D G++ +GPP P QG Q P P R QG
Sbjct: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG 115
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 32.0 bits (71), Expect = 0.70
Identities = 18/58 (31%), Positives = 22/58 (37%)
Query: 76 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 133
PS G N+ D G++ +GPP P QG Q P P R QG
Sbjct: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG 115
>gi|239746493 PREDICTED: hypothetical protein XP_002343745 [Homo
sapiens]
Length = 529
Score = 31.6 bits (70), Expect = 0.91
Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 10/122 (8%)
Query: 93 LALGEEARGPPSPLNPLQGISQAPQRPQAPGP----------RGAAEQSQGSPCVRQEKT 142
L L R P L P + + P+ P P P GAA+ S P
Sbjct: 93 LGLESRTRLAPCALRPDRFPRRFPEPPPQPAPPAGGARKERDAGAADLSPRRPGRSGVAR 152
Query: 143 RVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGP 202
R A ++ + E R PG G A+ L F L+ PL L V G+
Sbjct: 153 RPGDARTQSAGPERRAHLPGPGAGPGFCGARALLPAFEALVVRASCPLNLGQVCRTGVAG 212
Query: 203 QE 204
++
Sbjct: 213 RD 214
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,084,958
Number of Sequences: 37866
Number of extensions: 760419
Number of successful extensions: 3380
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 3206
Number of HSP's gapped (non-prelim): 281
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.