Search of human proteins with 239745616

Search of human proteins with 239745616

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo
sapiens]
         (86 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens]          171   1e-43
gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo ...   171   1e-43
gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo ...   171   1e-43
gi|23312392 tigger transposable element derived 2 [Homo sapiens]       37   0.004
gi|49619234 hypothetical protein LOC92806 [Homo sapiens]               36   0.006
gi|239755627 PREDICTED: similar to cag [Homo sapiens]                  34   0.022
gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo ...    34   0.022
gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo ...    34   0.022
gi|22325392 tigger transposable element derived 7 [Homo sapiens]       33   0.037
gi|22209001 hypothetical protein LOC200765 [Homo sapiens]              33   0.037
gi|117938293 jerky isoform a [Homo sapiens]                            32   0.11 
gi|117938295 jerky isoform b [Homo sapiens]                            32   0.11 
gi|13569924 hypothetical protein LOC81789 [Homo sapiens]               31   0.24 
gi|100814339 coiled-coil domain containing 146 [Homo sapiens]          30   0.31 
gi|22547224 jerky homolog-like [Homo sapiens]                          29   0.91 
gi|31377750 YTH domain family, member 1 [Homo sapiens]                 28   1.2  
gi|117938307 doublecortin domain containing 2 [Homo sapiens]           28   1.6  
gi|222831595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 [Homo sap...    28   2.0  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    27   2.7  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    27   2.7  
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      27   4.5  
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      27   4.5  
gi|31742501 sorting nexin family member 27 [Homo sapiens]              27   4.5  
gi|212549538 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho...    27   4.5  
gi|195947361 histidine acid phosphatase domain containing 2A iso...    27   4.5  
gi|195947359 histidine acid phosphatase domain containing 2A iso...    27   4.5  
gi|66932994 histidine acid phosphatase domain containing 2A isof...    27   4.5  
gi|66932992 histidine acid phosphatase domain containing 2A isof...    27   4.5  
gi|103471995 serum response factor binding protein 1 [Homo sapiens]    27   4.5  
gi|122937396 coiled-coil domain containing 150 [Homo sapiens]          27   4.5  

>gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens]
          Length = 86

 Score =  171 bits (432), Expect = 1e-43
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI
Sbjct: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60

Query: 61 VRDEAMTKMEKMEKRLNLWIHEMSID 86
          VRDEAMTKMEKMEKRLNLWIHEMSID
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEMSID 86


>gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo
          sapiens]
          Length = 86

 Score =  171 bits (432), Expect = 1e-43
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI
Sbjct: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60

Query: 61 VRDEAMTKMEKMEKRLNLWIHEMSID 86
          VRDEAMTKMEKMEKRLNLWIHEMSID
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEMSID 86


>gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo
          sapiens]
          Length = 86

 Score =  171 bits (432), Expect = 1e-43
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI
Sbjct: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60

Query: 61 VRDEAMTKMEKMEKRLNLWIHEMSID 86
          VRDEAMTKMEKMEKRLNLWIHEMSID
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEMSID 86


>gi|23312392 tigger transposable element derived 2 [Homo sapiens]
          Length = 525

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          + + +K+ ++ KL+ G+S+  +     + EST+R IKK ++ I      + P S    S 
Sbjct: 10 LTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSG--VSK 67

Query: 61 VRDEAMTKMEKMEKRLNLWIHEMSID 86
           +    +  E++++ +  W ++   D
Sbjct: 68 RKSMKSSTYEELDRVMIEWFNQQKTD 93


>gi|49619234 hypothetical protein LOC92806 [Homo sapiens]
          Length = 187

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 6   KVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDEA 65
           K+ VL + ++G   S +   L++  ST+  I+  +++I  S + A P  A   S +    
Sbjct: 27  KLEVLRRFEAGEKLSQIAKALDLAISTVATIRDSKEKIKASSQIATPLRA---SRLTRHR 83

Query: 66  MTKMEKMEKRLNLWIHEMS 84
              ME ME+ L+LW+ + S
Sbjct: 84  SAVMESMEQLLSLWLEDQS 102


>gi|239755627 PREDICTED: similar to cag [Homo sapiens]
          Length = 392

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 1   MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
           + + +KV++L+KL SG+S   +  E  V  +TI  +KK++ ++ +   E+  D   +   
Sbjct: 66  LSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAES--DEQILMKN 123

Query: 61  VRDEAMTKMEKMEKRLNLWIHE 82
            +     K E +++ L  WI +
Sbjct: 124 RKTLHKAKNEDLDRVLKEWIRQ 145


>gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo
           sapiens]
          Length = 392

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 1   MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
           + + +KV++L+KL SG+S   +  E  V  +TI  +KK++ ++ +   E+  D   +   
Sbjct: 66  LSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAES--DEQILMKN 123

Query: 61  VRDEAMTKMEKMEKRLNLWIHE 82
            +     K E +++ L  WI +
Sbjct: 124 RKTLHKAKNEDLDRVLKEWIRQ 145


>gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo
           sapiens]
          Length = 392

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 1   MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
           + + +KV++L+KL SG+S   +  E  V  +TI  +KK++ ++ +   E+  D   +   
Sbjct: 66  LSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAES--DEQILMKN 123

Query: 61  VRDEAMTKMEKMEKRLNLWIHE 82
            +     K E +++ L  WI +
Sbjct: 124 RKTLHKAKNEDLDRVLKEWIRQ 145


>gi|22325392 tigger transposable element derived 7 [Homo sapiens]
          Length = 549

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 3  LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEI 43
          L EK++VL ++++G S  +V  E  +++ST   IKK +K I
Sbjct: 12 LEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLI 52


>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
          Length = 591

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          + L +K+ ++   + GMS + +G  L +   T+  +   +++  + V+ A P +   T +
Sbjct: 15 LTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMN---TRM 71

Query: 61 VRDEAMTKMEKMEKRLNLWIHEMS 84
          +R +  + +  MEK L +WI + +
Sbjct: 72 IR-KRNSLIADMEKVLVVWIEDQT 94


>gi|117938293 jerky isoform a [Homo sapiens]
          Length = 568

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          + L EK+ +  +L+ G S  A+  E NV  ST+  I+  + ++ R    A+ DS +    
Sbjct: 20 LTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFF--ASSDSNKALEQ 77

Query: 61 VRDEAMTKMEKMEKRLNLW 79
           R     K+E +++ L  W
Sbjct: 78 RRTLHTPKLEHLDRVLYEW 96


>gi|117938295 jerky isoform b [Homo sapiens]
          Length = 556

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          + L EK+ +  +L+ G S  A+  E NV  ST+  I+  + ++ R    A+ DS +    
Sbjct: 20 LTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFF--ASSDSNKALEQ 77

Query: 61 VRDEAMTKMEKMEKRLNLW 79
           R     K+E +++ L  W
Sbjct: 78 RRTLHTPKLEHLDRVLYEW 96


>gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
          Length = 521

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 3  LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAA--PDSAEVTSI 60
          L EK++V+  + SG     V  E  +  ST+    K   +    VREA+  P    + S 
Sbjct: 14 LEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSA 73

Query: 61 VRDEAMTKMEKMEKRLNLWIHEM 83
          + D+       ++K +  W  E+
Sbjct: 74 LYDD-------IDKAVFAWFQEI 89


>gi|100814339 coiled-coil domain containing 146 [Homo sapiens]
          Length = 955

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 14/85 (16%)

Query: 11  DKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDE------ 64
           D L++   Y+ +  E+   +  IR  KKK+ EI+R +RE     A++   +R+E      
Sbjct: 475 DFLKAQQKYTNIVKEMKAKDLEIRIHKKKKCEIYRRLRE----FAKLYDTIRNERNKFVN 530

Query: 65  ----AMTKMEKMEKRLNLWIHEMSI 85
               A  K+ ++++R  + ++E+ I
Sbjct: 531 LLHKAHQKVNEIKERHKMSLNELEI 555


>gi|22547224 jerky homolog-like [Homo sapiens]
          Length = 524

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/82 (18%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 1  MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
          + + +K+ ++ KL+ G S   +     + E+T+R I+K +++I      ++ DS  + + 
Sbjct: 10 LTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKI--ITYASSSDSTSLLAK 67

Query: 61 VRDEAMTKMEKMEKRLNLWIHE 82
           +    +  E++++ +  W ++
Sbjct: 68 RKSMKPSMYEELDRAMLEWFNQ 89


>gi|31377750 YTH domain family, member 1 [Homo sapiens]
          Length = 559

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 9   VLDKLQSGMSYSAVGHELNVNESTIRYIKK-KEKEIHRSVR 48
           VL+KL++  SY+    E N+    +  IK   E +IHRS++
Sbjct: 367 VLEKLKAAHSYNPKEFEWNLKSGRVFIIKSYSEDDIHRSIK 407


>gi|117938307 doublecortin domain containing 2 [Homo sapiens]
          Length = 476

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 6   KVRVLDKLQSGMSYSAVGHEL--NVNESTIRYIKKKEKEI 43
           ++R LD++QSG +Y A G E    +N   I  IKK+  E+
Sbjct: 73  RIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEV 112


>gi|222831595 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 [Homo sapiens]
          Length = 1712

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 3    LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKK---------EKEIHRSVRE--AA 51
            L EK+R ++KL +      +G   N  ES   ++KKK         +KE H    +    
Sbjct: 1117 LVEKLRKMEKLPALFFLFKLGAVENAAESVSTFLKKKQETKRPPKADKEAHVMANKLRKV 1176

Query: 52   PDSAEVTSIVRDEAMTKMEKMEKRLNLWIHEMSID 86
              S E   I+ +++  K   +++ L   IHE   D
Sbjct: 1177 KKSIEKQKIIDEKSQKKTRNVDQSL---IHEAEHD 1208


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 36   IKKKEKEIHRSVREAAPDSAEVTSIVRDEAMTKMEKMEKRLNLWIHEM 83
            I K  +E    +++   D   +     +  +   E   ++LNLWIHEM
Sbjct: 2496 ITKANEEFQAFLKQCLKDKQALQDCASE--LGSFEDQHRKLNLWIHEM 2541


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 36   IKKKEKEIHRSVREAAPDSAEVTSIVRDEAMTKMEKMEKRLNLWIHEM 83
            I K  +E    +++   D   +     +  +   E   ++LNLWIHEM
Sbjct: 2489 ITKANEEFQAFLKQCLKDKQALQDCASE--LGSFEDQHRKLNLWIHEM 2534


>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1723

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 28 VNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDE 64
          + + T+R  K+ E+E+  ++ EAA DS+E  S  RD+
Sbjct: 18 IQKKTLR--KELEEEMTEAITEAAVDSSEEVSEERDD 52


>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1706

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 28 VNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDE 64
          + + T+R  K+ E+E+  ++ EAA DS+E  S  RD+
Sbjct: 18 IQKKTLR--KELEEEMTEAITEAAVDSSEEVSEERDD 52


>gi|31742501 sorting nexin family member 27 [Homo sapiens]
          Length = 528

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 4   TEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPD 53
           T  VRV     +   Y A+  ++ ++ +T+ Y    E   H  VR+ AP+
Sbjct: 286 TVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFEVISHSFVRKLAPN 335


>gi|212549538 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Homo
           sapiens]
          Length = 906

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 1   MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPD-SAEVTS 59
           +C+ E VR L  +Q  ++   V  + + +E      ++K K   +  + A P  + E   
Sbjct: 266 LCVNEDVRSLGSVQL-INNRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMG 324

Query: 60  IVRDEAMTKMEKMEKRLNL 78
           ++RDEA+ +++ ME+ L L
Sbjct: 325 LLRDEALAEVKDMEQLLAL 343


>gi|195947361 histidine acid phosphatase domain containing 2A
           isoform 2 [Homo sapiens]
          Length = 1408

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 12/53 (22%), Positives = 27/53 (50%)

Query: 13  LQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDEA 65
           L   ++YS + +   +N+  ++Y  +  +E++R ++E   D      + RD A
Sbjct: 118 LDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPA 170


>gi|195947359 histidine acid phosphatase domain containing 2A
           isoform 5 [Homo sapiens]
          Length = 1433

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 12/53 (22%), Positives = 27/53 (50%)

Query: 13  LQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDEA 65
           L   ++YS + +   +N+  ++Y  +  +E++R ++E   D      + RD A
Sbjct: 118 LDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPA 170


>gi|66932994 histidine acid phosphatase domain containing 2A isoform
           4 [Homo sapiens]
          Length = 1194

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 12/53 (22%), Positives = 27/53 (50%)

Query: 13  LQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDEA 65
           L   ++YS + +   +N+  ++Y  +  +E++R ++E   D      + RD A
Sbjct: 118 LDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPA 170


>gi|66932992 histidine acid phosphatase domain containing 2A isoform
           2 [Homo sapiens]
          Length = 1408

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 12/53 (22%), Positives = 27/53 (50%)

Query: 13  LQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSIVRDEA 65
           L   ++YS + +   +N+  ++Y  +  +E++R ++E   D      + RD A
Sbjct: 118 LDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPA 170


>gi|103471995 serum response factor binding protein 1 [Homo sapiens]
          Length = 429

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 8/60 (13%)

Query: 33  IRYIKKKEKEIHRSVREAAP--------DSAEVTSIVRDEAMTKMEKMEKRLNLWIHEMS 84
           +R  +KKE   H SV+E  P        D+ E     R++ +    +  K  +++ H +S
Sbjct: 290 VRRTRKKESSCHSSVKEQKPLEKVFLKEDTGETHGDTRNDKIKPSTETRKLESVFFHSLS 349


>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
          Length = 1101

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 9/30 (30%), Positives = 22/30 (73%)

Query: 30   ESTIRYIKKKEKEIHRSVREAAPDSAEVTS 59
            E T+R++KK ++    +++EA+ +S ++T+
Sbjct: 997  EETVRHLKKCKEATENTLKEASVESEQITA 1026


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.126    0.339 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,627,483
Number of Sequences: 37866
Number of extensions: 80927
Number of successful extensions: 342
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 306
Number of HSP's gapped (non-prelim): 45
length of query: 86
length of database: 18,247,518
effective HSP length: 58
effective length of query: 28
effective length of database: 16,051,290
effective search space: 449436120
effective search space used: 449436120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.