Guide to the Human Genome
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Search of human proteins with 239745360

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo
sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo ...   419   e-118
gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo ...   419   e-118
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]            42   3e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]            42   3e-04
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]            42   3e-04
gi|169168451 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|169168160 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|169167373 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       37   0.008
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    37   0.008
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    37   0.008
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    37   0.008
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    37   0.008
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ...    37   0.011
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ...    37   0.011
gi|46195763 metastasis suppressor 1-like [Homo sapiens]                37   0.011
gi|147902746 MEX3A protein [Homo sapiens]                              37   0.011
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]            36   0.018
gi|188536004 zinc finger protein 469 [Homo sapiens]                    36   0.018
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ...    36   0.018
gi|18466802 Ras and Rab interactor 2 [Homo sapiens]                    36   0.018
gi|189181724 proteoglycan 4 isoform D [Homo sapiens]                   36   0.023
gi|189181722 proteoglycan 4 isoform C [Homo sapiens]                   36   0.023
gi|189181720 proteoglycan 4 isoform B [Homo sapiens]                   36   0.023
gi|67190163 proteoglycan 4 isoform A [Homo sapiens]                    36   0.023
gi|122937247 unc-13 homolog A [Homo sapiens]                           36   0.023
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]    36   0.023
gi|239753160 PREDICTED: hypothetical protein XP_002345578 [Homo ...    35   0.031
gi|239747730 PREDICTED: hypothetical protein XP_002348256 [Homo ...    35   0.031
gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo ...    35   0.031

>gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo
           sapiens]
          Length = 194

 Score =  419 bits (1078), Expect = e-118
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60
           MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR
Sbjct: 1   MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60

Query: 61  TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120
           TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW
Sbjct: 61  TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120

Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
           PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS
Sbjct: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180

Query: 181 SRSSSLSHASLLCP 194
           SRSSSLSHASLLCP
Sbjct: 181 SRSSSLSHASLLCP 194


>gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo
           sapiens]
          Length = 194

 Score =  419 bits (1078), Expect = e-118
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60
           MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR
Sbjct: 1   MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60

Query: 61  TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120
           TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW
Sbjct: 61  TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120

Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
           PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS
Sbjct: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180

Query: 181 SRSSSLSHASLLCP 194
           SRSSSLSHASLLCP
Sbjct: 181 SRSSSLSHASLLCP 194


>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 466

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 58/197 (29%), Positives = 74/197 (37%), Gaps = 25/197 (12%)

Query: 7   GAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQT-----RT 61
           GA  AR  V   EK+   P       ++L    G         Q  R  A  +     RT
Sbjct: 224 GAAGARAQVRGSEKRA-CPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTGART 282

Query: 62  PMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTW 120
              PSRA P  P             G   P   +   GGG +   QL G G G  +  + 
Sbjct: 283 LPTPSRARPGKP----------APRGSAPPA--RLRGGGGGSGLTQLVGSGRGSGVTHSV 330

Query: 121 PEAPLCGRPGQGA-WGAGPTREAPP--PLETPAPPMPRPNEDPRYGGPALGAGRPSQSSC 177
               L  R G  A    G  R  P   PL +PAP  P  +   R  GP LGAGR    SC
Sbjct: 331 GTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGR---LSC 387

Query: 178 QASSRSSSLSHASLLCP 194
             + R+++L   ++L P
Sbjct: 388 PQAPRAAALPGIAVLAP 404


>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 57/189 (30%), Positives = 78/189 (41%), Gaps = 28/189 (14%)

Query: 10  AARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAH 69
           A RT +++ E++      D      L  AQG  + A ++  G    +S  RT   PSRA 
Sbjct: 338 AVRTDLSTAEEE------DPRSGRALEPAQGSELWARAERHGG---SSGARTLPTPSRAR 388

Query: 70  PTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTWPEAPLCGR 128
           P  P             G   P   +   GGG +   QL G G G  +  +     L  R
Sbjct: 389 PGKP----------APRGSAPPA--RLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATR 436

Query: 129 PGQGA-WGAGPTREAPP--PLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSS 185
            G  A    G  R  P   PL +PAP  P  +   R  GP LGAGR    SC  + R+++
Sbjct: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGR---LSCPQAPRAAA 493

Query: 186 LSHASLLCP 194
           L   ++L P
Sbjct: 494 LPGIAVLAP 502


>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 57/189 (30%), Positives = 78/189 (41%), Gaps = 28/189 (14%)

Query: 10  AARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAH 69
           A RT +++ E++      D      L  AQG  + A ++  G    +S  RT   PSRA 
Sbjct: 338 AVRTDLSTAEEE------DPRSGRALEPAQGSELWARAERHGG---SSGARTLPTPSRAR 388

Query: 70  PTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTWPEAPLCGR 128
           P  P             G   P   +   GGG +   QL G G G  +  +     L  R
Sbjct: 389 PGKP----------APRGSAPPA--RLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATR 436

Query: 129 PGQGA-WGAGPTREAPP--PLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSS 185
            G  A    G  R  P   PL +PAP  P  +   R  GP LGAGR    SC  + R+++
Sbjct: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGR---LSCPQAPRAAA 493

Query: 186 LSHASLLCP 194
           L   ++L P
Sbjct: 494 LPGIAVLAP 502


>gi|169168451 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
           G GG   L+   +  + GRP  G  G G T + PP L+ P P    P+  PR   PA  A
Sbjct: 42  GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100

Query: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
              P  S+C+A         ASL CP
Sbjct: 101 CFFPRGSTCRALPLL-----ASLFCP 121


>gi|169168160 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
           G GG   L+   +  + GRP  G  G G T + PP L+ P P    P+  PR   PA  A
Sbjct: 42  GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100

Query: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
              P  S+C+A         ASL CP
Sbjct: 101 CFFPRGSTCRALPLL-----ASLFCP 121


>gi|169167373 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
           G GG   L+   +  + GRP  G  G G T + PP L+ P P    P+  PR   PA  A
Sbjct: 42  GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100

Query: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
              P  S+C+A         ASL CP
Sbjct: 101 CFFPRGSTCRALPLL-----ASLFCP 121


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 20/53 (37%), Positives = 23/53 (43%)

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
           W +G  R  PP    PAPP P P      GG A  AG P   +  A +R   L
Sbjct: 90  WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 142



 Score = 30.8 bits (68), Expect = 0.76
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
           P+R APPP   P   +PR     R GGP   A       C+  S     R+  L H S
Sbjct: 102 PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 158


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 20/53 (37%), Positives = 23/53 (43%)

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
           W +G  R  PP    PAPP P P      GG A  AG P   +  A +R   L
Sbjct: 73  WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 125



 Score = 30.8 bits (68), Expect = 0.76
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
           P+R APPP   P   +PR     R GGP   A       C+  S     R+  L H S
Sbjct: 85  PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 141


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 20/53 (37%), Positives = 23/53 (43%)

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
           W +G  R  PP    PAPP P P      GG A  AG P   +  A +R   L
Sbjct: 81  WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 133



 Score = 30.8 bits (68), Expect = 0.76
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
           P+R APPP   P   +PR     R GGP   A       C+  S     R+  L H S
Sbjct: 93  PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 149


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 20/53 (37%), Positives = 23/53 (43%)

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
           W +G  R  PP    PAPP P P      GG A  AG P   +  A +R   L
Sbjct: 73  WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 125



 Score = 30.8 bits (68), Expect = 0.76
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
           P+R APPP   P   +PR     R GGP   A       C+  S     R+  L H S
Sbjct: 85  PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 141


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 20/53 (37%), Positives = 23/53 (43%)

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
           W +G  R  PP    PAPP P P      GG A  AG P   +  A +R   L
Sbjct: 81  WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 133



 Score = 30.8 bits (68), Expect = 0.76
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
           P+R APPP   P   +PR     R GGP   A       C+  S     R+  L H S
Sbjct: 93  PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 149


>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
           sapiens]
          Length = 647

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 10/63 (15%)

Query: 124 PLCGRPGQGAWGAGPTREAPP--PLETPAPPMPRP---NEDPRYGGPALGAGRPSQSSCQ 178
           P C RP     GAGP RE P   P   P PP  RP    +DP   GP    G P+ S   
Sbjct: 401 PPCARPS----GAGPAREGPAAWPGGAPTPPHARPTGRRQDPE-PGPRAPRGGPASSGWH 455

Query: 179 ASS 181
           A S
Sbjct: 456 AGS 458


>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
           sapiens]
          Length = 647

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 10/63 (15%)

Query: 124 PLCGRPGQGAWGAGPTREAPP--PLETPAPPMPRP---NEDPRYGGPALGAGRPSQSSCQ 178
           P C RP     GAGP RE P   P   P PP  RP    +DP   GP    G P+ S   
Sbjct: 401 PPCARPS----GAGPAREGPAAWPGGAPTPPHARPTGRRQDPE-PGPRAPRGGPASSGWH 455

Query: 179 ASS 181
           A S
Sbjct: 456 AGS 458


>gi|46195763 metastasis suppressor 1-like [Homo sapiens]
          Length = 747

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 7/156 (4%)

Query: 6   SGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYP 65
           S  P  R A++S    P  P    +    +P + G M P  + ++       +T +P+ P
Sbjct: 569 STKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPGYMGPTRAGSEECVFYTDETASPLAP 628

Query: 66  SRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPL 125
             A  +  RL   +TA G+   + + +      G G     Q      H L++   E   
Sbjct: 629 DLAKASPKRLSLPNTAWGSPSPEAAGY-----PGAGAEDEQQQLAANRHSLVEKLGELVA 683

Query: 126 CGRP-GQGAWGAGPTREAPPPLETPAPPMPRPNEDP 160
                G+G +       A P  ETP PP P    DP
Sbjct: 684 GAHALGEGQFPFPTALSATPTEETPTPP-PAATSDP 718


>gi|147902746 MEX3A protein [Homo sapiens]
          Length = 520

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 8/71 (11%)

Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
           P AP  G  G G  G  P + A PP   P PP   P        PA     P+  + Q  
Sbjct: 53  PPAPTAGEDGGGGGGGAPAQPAAPPQPAPPPPPAAP--------PAAPTAAPAAQTPQPP 104

Query: 181 SRSSSLSHASL 191
           +     S A L
Sbjct: 105 TAPKGASDAKL 115


>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 40/145 (27%), Positives = 49/145 (33%), Gaps = 32/145 (22%)

Query: 41  PMVPAPSDTQGPRLPASQTRT------------PMYPSRAHPTHPRLWWAHTAEGTQLGD 88
           P  P PS  + P  P    R                P RA P   R W   +A       
Sbjct: 40  PTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSA------- 92

Query: 89  CSPH--IWQEAE-GGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPP 145
            SPH  +W  +   GG    +    +  H    T PE  L          A P +  P P
Sbjct: 93  ASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELEL---------PADPAQPDPAP 143

Query: 146 LETPAPPMPRPNEDPRYGGPALGAG 170
           L  PAPP P  ++ P   GP   AG
Sbjct: 144 LSRPAPPRP-AHQSPAEEGPRGAAG 167


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPL--ETPAPPMPRPNEDPRYGGPALGAGRPSQSS 176
           P  P  G P +   G  P  +APPPL   TP P  PRP +    G PA   GRP   S
Sbjct: 876 PRGPSSGHPLKSKAGVTPESKAPPPLPAATPDPQTPRPGD---RGCPA--RGRPKTRS 928



 Score = 27.3 bits (59), Expect = 8.4
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 148  TPAPPM--PRPNEDPRYGGPALGAGRPSQSSCQASSR 182
            +P PP   P P+ DP  GG  L    P   +C+  SR
Sbjct: 3273 SPGPPRTTPSPSPDPWAGGEPLLQATPVHEACKDPSR 3309


>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
           sapiens]
          Length = 1119

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 45/194 (23%), Positives = 64/194 (32%), Gaps = 28/194 (14%)

Query: 18  EEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHPRLWW 77
           EE +P + H         P  QG M P   D++  +    Q      P +A         
Sbjct: 518 EENKPPSRHAGGK----APGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDL 573

Query: 78  AHTAEGTQLGDCSPHIWQEAEG---GGRTVHNQLRGI-----------GGHQLLQTWPEA 123
               +     D  P +    E    G R +H + + +           GG +     P  
Sbjct: 574 PEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPG 633

Query: 124 PLCGRPGQGAWGAGPTREAPPPLETPA-----PPMPRPNEDPRYGGPALGAGRPSQSSCQ 178
              G  GQ A  +    + P P E PA     PP PR   D    G     G  + S  +
Sbjct: 634 NAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAG-----GNQAASQLE 688

Query: 179 ASSRSSSLSHASLL 192
            + R+  L HA LL
Sbjct: 689 EAGRAEMLDHAVLL 702


>gi|18466802 Ras and Rab interactor 2 [Homo sapiens]
          Length = 895

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 49/167 (29%), Positives = 63/167 (37%), Gaps = 26/167 (15%)

Query: 24  TPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHPRLWWAHTAEG 83
           TP+ +    T  P  + P     S    PRL  ++T+T M  +  H  H  +       G
Sbjct: 295 TPNANGTERTRSPPPRPPPPAINSLHTSPRLARTETQTSMPETVNHNKHGNV----ALPG 350

Query: 84  TQLGDCSP------HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGAWGAG 137
           T+     P        + EAEGG +T+     G G    L T       G PG    GA 
Sbjct: 351 TKPTPIPPPRLKKQASFLEAEGGAKTLSGGRPGAGPELELGT------AGSPG----GAP 400

Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSS 184
           P  EA P   T APP    +  P +G    G  R S  S   SS  S
Sbjct: 401 P--EAAPGDCTRAPPPSSESRPPCHG----GRQRLSDMSISTSSSDS 441


>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
          Length = 1270

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P   +   ++E  P TP +        PA   P  PAP+  + P    ++   P  P   
Sbjct: 415 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 474

Query: 69  HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
            PT P+     TA  T  +L   +P      E    T   +       +L  T PE P  
Sbjct: 475 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 524

Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
             P + A      A P     P   TP  P P   ++P
Sbjct: 525 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 562



 Score = 33.1 bits (74), Expect = 0.15
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 4   SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
           +I  AP      A  + +  P TP +     T  PA   P  PAP+ T+ P  P +    
Sbjct: 236 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 294

Query: 62  PMYPSRAHPTHPR 74
           P  P    PT P+
Sbjct: 295 PTTPKEPAPTTPK 307



 Score = 30.4 bits (67), Expect = 0.99
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)

Query: 2   KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
           K +    P        +E  P TP          PA   P  PAP +     T+GP    
Sbjct: 621 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 680

Query: 57  SQTRTPMYPSRAHPTHPR 74
           S    P  P    PT P+
Sbjct: 681 SDKPAPTTPKETAPTTPK 698



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)

Query: 14  AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
           A  ++E  P TP +        PA   P  PAP+  + P    ++  +P  P    PT  
Sbjct: 334 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 393

Query: 74  RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
           +      +  T   + +P   + A     T   +       +   T P+ P    P + A
Sbjct: 394 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 443

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
               PT    P   TP  P P   + P
Sbjct: 444 ----PTTPKEPAPTTPKEPAPTTTKKP 466



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 20/76 (26%), Positives = 26/76 (34%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P        EE  P TP +        PA   P   AP+  + P     +   P  P   
Sbjct: 503 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 562

Query: 69  HPTHPRLWWAHTAEGT 84
            PT P+     T +GT
Sbjct: 563 APTTPKETAPTTPKGT 578



 Score = 28.5 bits (62), Expect = 3.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)

Query: 13  TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
           T+  S++  P TP +        PA   P  PAP+  + P    S+  TP
Sbjct: 677 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 726


>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
          Length = 1311

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P   +   ++E  P TP +        PA   P  PAP+  + P    ++   P  P   
Sbjct: 456 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 515

Query: 69  HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
            PT P+     TA  T  +L   +P      E    T   +       +L  T PE P  
Sbjct: 516 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 565

Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
             P + A      A P     P   TP  P P   ++P
Sbjct: 566 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603



 Score = 33.1 bits (74), Expect = 0.15
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 4   SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
           +I  AP      A  + +  P TP +     T  PA   P  PAP+ T+ P  P +    
Sbjct: 277 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 335

Query: 62  PMYPSRAHPTHPR 74
           P  P    PT P+
Sbjct: 336 PTTPKEPAPTTPK 348



 Score = 30.4 bits (67), Expect = 0.99
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)

Query: 2   KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
           K +    P        +E  P TP          PA   P  PAP +     T+GP    
Sbjct: 662 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 721

Query: 57  SQTRTPMYPSRAHPTHPR 74
           S    P  P    PT P+
Sbjct: 722 SDKPAPTTPKETAPTTPK 739



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)

Query: 14  AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
           A  ++E  P TP +        PA   P  PAP+  + P    ++  +P  P    PT  
Sbjct: 375 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 434

Query: 74  RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
           +      +  T   + +P   + A     T   +       +   T P+ P    P + A
Sbjct: 435 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 484

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
               PT    P   TP  P P   + P
Sbjct: 485 ----PTTPKEPAPTTPKEPAPTTTKKP 507



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 20/76 (26%), Positives = 26/76 (34%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P        EE  P TP +        PA   P   AP+  + P     +   P  P   
Sbjct: 544 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603

Query: 69  HPTHPRLWWAHTAEGT 84
            PT P+     T +GT
Sbjct: 604 APTTPKETAPTTPKGT 619



 Score = 28.5 bits (62), Expect = 3.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)

Query: 13  TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
           T+  S++  P TP +        PA   P  PAP+  + P    S+  TP
Sbjct: 718 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 767


>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
          Length = 1363

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P   +   ++E  P TP +        PA   P  PAP+  + P    ++   P  P   
Sbjct: 508 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 567

Query: 69  HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
            PT P+     TA  T  +L   +P      E    T   +       +L  T PE P  
Sbjct: 568 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 617

Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
             P + A      A P     P   TP  P P   ++P
Sbjct: 618 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655



 Score = 33.1 bits (74), Expect = 0.15
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 4   SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
           +I  AP      A  + +  P TP +     T  PA   P  PAP+ T+ P  P +    
Sbjct: 329 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 387

Query: 62  PMYPSRAHPTHPR 74
           P  P    PT P+
Sbjct: 388 PTTPKEPAPTTPK 400



 Score = 30.4 bits (67), Expect = 0.99
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)

Query: 2   KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
           K +    P        +E  P TP          PA   P  PAP +     T+GP    
Sbjct: 714 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 773

Query: 57  SQTRTPMYPSRAHPTHPR 74
           S    P  P    PT P+
Sbjct: 774 SDKPAPTTPKETAPTTPK 791



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)

Query: 14  AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
           A  ++E  P TP +        PA   P  PAP+  + P    ++  +P  P    PT  
Sbjct: 427 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 486

Query: 74  RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
           +      +  T   + +P   + A     T   +       +   T P+ P    P + A
Sbjct: 487 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 536

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
               PT    P   TP  P P   + P
Sbjct: 537 ----PTTPKEPAPTTPKEPAPTTTKKP 559



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 20/76 (26%), Positives = 26/76 (34%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P        EE  P TP +        PA   P   AP+  + P     +   P  P   
Sbjct: 596 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655

Query: 69  HPTHPRLWWAHTAEGT 84
            PT P+     T +GT
Sbjct: 656 APTTPKETAPTTPKGT 671



 Score = 28.5 bits (62), Expect = 3.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)

Query: 13  TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
           T+  S++  P TP +        PA   P  PAP+  + P    S+  TP
Sbjct: 770 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 819


>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
          Length = 1404

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P   +   ++E  P TP +        PA   P  PAP+  + P    ++   P  P   
Sbjct: 549 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 608

Query: 69  HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
            PT P+     TA  T  +L   +P      E    T   +       +L  T PE P  
Sbjct: 609 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 658

Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
             P + A      A P     P   TP  P P   ++P
Sbjct: 659 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696



 Score = 33.1 bits (74), Expect = 0.15
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 4   SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
           +I  AP      A  + +  P TP +     T  PA   P  PAP+ T+ P  P +    
Sbjct: 370 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 428

Query: 62  PMYPSRAHPTHPR 74
           P  P    PT P+
Sbjct: 429 PTTPKEPAPTTPK 441



 Score = 30.4 bits (67), Expect = 0.99
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)

Query: 2   KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
           K +    P        +E  P TP          PA   P  PAP +     T+GP    
Sbjct: 755 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 814

Query: 57  SQTRTPMYPSRAHPTHPR 74
           S    P  P    PT P+
Sbjct: 815 SDKPAPTTPKETAPTTPK 832



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)

Query: 14  AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
           A  ++E  P TP +        PA   P  PAP+  + P    ++  +P  P    PT  
Sbjct: 468 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 527

Query: 74  RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
           +      +  T   + +P   + A     T   +       +   T P+ P    P + A
Sbjct: 528 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 577

Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
               PT    P   TP  P P   + P
Sbjct: 578 ----PTTPKEPAPTTPKEPAPTTTKKP 600



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 20/76 (26%), Positives = 26/76 (34%)

Query: 9   PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
           P        EE  P TP +        PA   P   AP+  + P     +   P  P   
Sbjct: 637 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696

Query: 69  HPTHPRLWWAHTAEGT 84
            PT P+     T +GT
Sbjct: 697 APTTPKETAPTTPKGT 712



 Score = 28.5 bits (62), Expect = 3.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)

Query: 13  TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
           T+  S++  P TP +        PA   P  PAP+  + P    S+  TP
Sbjct: 811 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 860


>gi|122937247 unc-13 homolog A [Homo sapiens]
          Length = 1791

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 29/107 (27%)

Query: 99  GGGRTVHNQLRGIGGHQLL------------QTWPEAPLCGRPGQGAWGAGPTREAPPPL 146
           GG  T+  Q+R   G  LL            + W EAPL   PG   + A P R AP P 
Sbjct: 4   GGTCTISVQVRVCTGGNLLGGRRRPLSPCNEEVWGEAPL---PGARPFNAPPARSAPAPS 60

Query: 147 ETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSLSHASLLC 193
             P   +P P++  R+  P  G  RP   +C+       L   SLLC
Sbjct: 61  GVPGLRLPAPHQ--RHSRP--GRLRP---TCE-------LGDMSLLC 93



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 8/59 (13%)

Query: 20 KQPDTPHQDKLW-ETLLPAAQ------GPMVPAPSDTQGPRLPASQTRTPMYPSRAHPT 71
          ++P +P  +++W E  LP A+          PAPS   G RLPA   R    P R  PT
Sbjct: 26 RRPLSPCNEEVWGEAPLPGARPFNAPPARSAPAPSGVPGLRLPAPHQRHSR-PGRLRPT 83


>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
          Length = 753

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 49/187 (26%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 6   SGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMV-PAPSDTQGPRLPASQTRTPMY 64
           SG P A +A+++       P          P+A GP   PAPS   G   P +Q   P  
Sbjct: 325 SGPPPAASALSTTPGNNGVPAP-----AAPPSALGPKASPAPSHNSGTPAPYAQAVAPPA 379

Query: 65  PSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTWPEA 123
           PS    T PR      + G   G           GG  +  N   G G G Q   T   +
Sbjct: 380 PSGPSTTQPRPPSVQPSGGGGGG--------SGGGGSSSSSNSSAGGGAGKQNGATSYSS 431

Query: 124 PLCGRPGQ----GAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQA 179
            +   P +     + G   + +A  P   P  P P  +++P    P  GAG  +  S   
Sbjct: 432 VVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPT-GAGGVAPGSGNN 490

Query: 180 SSRSSSL 186
           S   S L
Sbjct: 491 SGGPSLL 497


>gi|239753160 PREDICTED: hypothetical protein XP_002345578 [Homo
           sapiens]
          Length = 130

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 92  HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148
           H+   A   GR       G+    LL   P     P CG PG  A        A  PL T
Sbjct: 37  HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89

Query: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182
           P PP  R   D R  G A    A R  + +C   SR
Sbjct: 90  PRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125


>gi|239747730 PREDICTED: hypothetical protein XP_002348256 [Homo
           sapiens]
          Length = 130

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 92  HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148
           H+   A   GR       G+    LL   P     P CG PG  A        A  PL T
Sbjct: 37  HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89

Query: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182
           P PP  R   D R  G A    A R  + +C   SR
Sbjct: 90  PRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125


>gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo
           sapiens]
          Length = 130

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 92  HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148
           H+   A   GR       G+    LL   P     P CG PG  A        A  PL T
Sbjct: 37  HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89

Query: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182
           P PP  R   D R  G A    A R  + +C   SR
Sbjct: 90  PRPPWSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.130    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,058,993
Number of Sequences: 37866
Number of extensions: 749215
Number of successful extensions: 6929
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 486
Number of HSP's that attempted gapping in prelim test: 5296
Number of HSP's gapped (non-prelim): 1925
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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