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Search of human proteins with 239745286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745286 PREDICTED: hypothetical protein XP_002343417 [Homo
sapiens]
(103 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745286 PREDICTED: hypothetical protein XP_002343417 [Homo ... 218 1e-57
gi|113425405 PREDICTED: similar to dynamin 1 [Homo sapiens] 211 1e-55
gi|239745270 PREDICTED: hypothetical protein XP_002343416 [Homo ... 117 1e-27
gi|239745262 PREDICTED: hypothetical protein XP_002343372 [Homo ... 117 1e-27
gi|56549117 dynamin 1 isoform 2 [Homo sapiens] 114 1e-26
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 114 1e-26
gi|42544243 dynamin 3 isoform a [Homo sapiens] 86 8e-18
gi|209915561 dynamin 3 isoform b [Homo sapiens] 86 8e-18
gi|56549125 dynamin 2 isoform 4 [Homo sapiens] 84 3e-17
gi|56549123 dynamin 2 isoform 2 [Homo sapiens] 84 3e-17
gi|56549121 dynamin 2 isoform 1 [Homo sapiens] 84 3e-17
gi|56549119 dynamin 2 isoform 3 [Homo sapiens] 84 3e-17
gi|239756350 PREDICTED: UPF0621 protein C-like [Homo sapiens] 60 4e-10
gi|239750876 PREDICTED: UPF0621 protein C-like [Homo sapiens] 60 4e-10
gi|169208224 PREDICTED: UPF0621 protein C-like [Homo sapiens] 60 4e-10
gi|239756412 PREDICTED: similar to dynamin 1, partial [Homo sapi... 36 0.006
gi|239756410 PREDICTED: similar to dynamin 1, partial [Homo sapi... 32 0.082
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 32 0.14
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 32 0.14
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 31 0.24
gi|157671951 solute carrier family 4, anion exchanger, member 3 ... 30 0.41
gi|157671953 solute carrier family 4, anion exchanger, member 3 ... 30 0.41
gi|157738687 WEE1 homolog 2 [Homo sapiens] 29 0.70
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 29 0.70
gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens] 28 1.2
gi|7662058 tectonin beta-propeller repeat containing 2 [Homo sap... 28 1.2
gi|29826341 calmodulin binding transcription activator 2 [Homo s... 28 1.2
gi|226437579 NAC alpha domain containing [Homo sapiens] 28 1.6
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 28 1.6
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 28 1.6
>gi|239745286 PREDICTED: hypothetical protein XP_002343417 [Homo
sapiens]
Length = 103
Score = 218 bits (554), Expect = 1e-57
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPPPVDDTWLQVQ 60
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPPPVDDTWLQVQ
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPPPVDDTWLQVQ 60
Query: 61 SIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGSHLE 103
SIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGSHLE
Sbjct: 61 SIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGSHLE 103
>gi|113425405 PREDICTED: similar to dynamin 1 [Homo sapiens]
Length = 105
Score = 211 bits (536), Expect = 1e-55
Identities = 102/105 (97%), Positives = 102/105 (97%), Gaps = 2/105 (1%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP--PPVDDTWLQ 58
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP PPVDDTWLQ
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGSHLE 103
VQSIPDAHRYQRLPPTAPKSPTRDAQRSALG SGTPPHRGGSHLE
Sbjct: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRGGSHLE 105
>gi|239745270 PREDICTED: hypothetical protein XP_002343416 [Homo
sapiens]
Length = 63
Score = 117 bits (294), Expect = 1e-27
Identities = 57/59 (96%), Positives = 57/59 (96%), Gaps = 2/59 (3%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWL 57
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT MPPPVDDTWL
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL 59
>gi|239745262 PREDICTED: hypothetical protein XP_002343372 [Homo
sapiens]
Length = 63
Score = 117 bits (294), Expect = 1e-27
Identities = 57/59 (96%), Positives = 57/59 (96%), Gaps = 2/59 (3%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWL 57
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT MPPPVDDTWL
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL 59
>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
Length = 851
Score = 114 bits (286), Expect = 1e-26
Identities = 63/102 (61%), Positives = 72/102 (70%), Gaps = 13/102 (12%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YSCG+QNTLMEE AEQAQ+ DEML M+HALKEALSIIGDIN TTV+ MPPPVDD+WLQ
Sbjct: 705 LYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDINTTTVSTPMPPPVDDSWLQ 764
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGS 100
VQS+P R PT+ +P R A PP R GS
Sbjct: 765 VQSVPAGRR----SPTSSPTPQRRA-------PAVPPARPGS 795
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 114 bits (286), Expect = 1e-26
Identities = 63/102 (61%), Positives = 72/102 (70%), Gaps = 13/102 (12%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YSCG+QNTLMEE AEQAQ+ DEML M+HALKEALSIIGDIN TTV+ MPPPVDD+WLQ
Sbjct: 705 LYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDINTTTVSTPMPPPVDDSWLQ 764
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGS 100
VQS+P R PT+ +P R A PP R GS
Sbjct: 765 VQSVPAGRR----SPTSSPTPQRRA-------PAVPPARPGS 795
>gi|42544243 dynamin 3 isoform a [Homo sapiens]
Length = 863
Score = 85.5 bits (210), Expect = 8e-18
Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 12/99 (12%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YS +QNTLMEE AEQAQ+ DEML M+ ALKEAL IIGDI+ TV+ PPPVDD+W+Q
Sbjct: 699 LYSSEDQNTLMEESAEQAQRRDEMLRMYQALKEALGIIGDISTATVSTPAPPPVDDSWIQ 758
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALG--TSGTPP 95
+R PP +P + R + L TSG P
Sbjct: 759 --------HSRRSPPPSPTTQRRPTLSAPLARPTSGRGP 789
>gi|209915561 dynamin 3 isoform b [Homo sapiens]
Length = 859
Score = 85.5 bits (210), Expect = 8e-18
Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 12/99 (12%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YS +QNTLMEE AEQAQ+ DEML M+ ALKEAL IIGDI+ TV+ PPPVDD+W+Q
Sbjct: 695 LYSSEDQNTLMEESAEQAQRRDEMLRMYQALKEALGIIGDISTATVSTPAPPPVDDSWIQ 754
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALG--TSGTPP 95
+R PP +P + R + L TSG P
Sbjct: 755 --------HSRRSPPPSPTTQRRPTLSAPLARPTSGRGP 785
>gi|56549125 dynamin 2 isoform 4 [Homo sapiens]
Length = 866
Score = 83.6 bits (205), Expect = 3e-17
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 15/97 (15%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ +PPPVDDTWLQ
Sbjct: 695 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 754
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPP 95
S +H PT + P S++ G PP
Sbjct: 755 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 778
>gi|56549123 dynamin 2 isoform 2 [Homo sapiens]
Length = 870
Score = 83.6 bits (205), Expect = 3e-17
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 15/97 (15%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ +PPPVDDTWLQ
Sbjct: 699 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 758
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPP 95
S +H PT + P S++ G PP
Sbjct: 759 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 782
>gi|56549121 dynamin 2 isoform 1 [Homo sapiens]
Length = 870
Score = 83.6 bits (205), Expect = 3e-17
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 15/97 (15%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ +PPPVDDTWLQ
Sbjct: 699 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 758
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPP 95
S +H PT + P S++ G PP
Sbjct: 759 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 782
>gi|56549119 dynamin 2 isoform 3 [Homo sapiens]
Length = 866
Score = 83.6 bits (205), Expect = 3e-17
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 15/97 (15%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVT--MPPPVDDTWLQ 58
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ +PPPVDDTWLQ
Sbjct: 695 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 754
Query: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPP 95
S +H PT + P S++ G PP
Sbjct: 755 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 778
>gi|239756350 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 135
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP 49
+YSCG++N LME+ EQA+ +E L MHH L+EA +IIGDI T V+MP
Sbjct: 82 LYSCGDENMLMEDSTEQAKWCNETLCMHHVLREAPNIIGDIKTTMVSMP 130
>gi|239750876 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 135
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP 49
+YSCG++N LME+ EQA+ +E L MHH L+EA +IIGDI T V+MP
Sbjct: 82 LYSCGDENMLMEDSTEQAKWCNETLCMHHVLREAPNIIGDIKTTMVSMP 130
>gi|169208224 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 155
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP 49
+YSCG++N LME+ EQA+ +E L MHH L+EA +IIGDI T V+MP
Sbjct: 102 LYSCGDENMLMEDSTEQAKWCNETLCMHHVLREAPNIIGDIKTTMVSMP 150
>gi|239756412 PREDICTED: similar to dynamin 1, partial [Homo
sapiens]
Length = 350
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALS 36
+YS N TL+EE AEQAQ+ DEML + A++ AL+
Sbjct: 158 LYSRRNLQTLVEESAEQAQRCDEMLLLRAAVQPALA 193
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALS 36
+YS N TL+EE AEQAQ+ DEML + A++ AL+
Sbjct: 303 LYSRRNLQTLVEESAEQAQRCDEMLLLRAAVQPALA 338
Score = 33.9 bits (76), Expect = 0.028
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDE 23
++S GN+ TLMEE AEQAQ+ DE
Sbjct: 251 LHSRGNEKTLMEESAEQAQRRDE 273
Score = 30.8 bits (68), Expect = 0.24
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 5 GNQNTLMEELAEQAQQHDE 23
GN+ TLMEE AEQAQ+ DE
Sbjct: 110 GNEKTLMEESAEQAQRCDE 128
Score = 25.8 bits (55), Expect = 7.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
++S GN+ TL+E AEQA Q +L
Sbjct: 15 LHSRGNEKTLVEASAEQADQGVHLL 39
>gi|239756410 PREDICTED: similar to dynamin 1, partial [Homo
sapiens]
Length = 191
Score = 32.3 bits (72), Expect = 0.082
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDE 23
++S GN+ TL+EE AEQAQ+ DE
Sbjct: 106 LHSRGNEKTLVEESAEQAQRRDE 128
Score = 30.4 bits (67), Expect = 0.31
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
+YS GN+ TL+EE AEQA Q +L
Sbjct: 158 LYSRGNEKTLLEESAEQADQGVHLL 182
Score = 27.7 bits (60), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
+YS GN+ TL+E AEQA Q +L
Sbjct: 15 LYSRGNEKTLVEASAEQADQGVHLL 39
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 31.6 bits (70), Expect = 0.14
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 73 PTAPKSPTRDAQRSALGTSGTPPHRGGS 100
P AP P D + G GTPP RG S
Sbjct: 837 PPAPAGPASDTEEEEPGPEGTPPSRGSS 864
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 31.6 bits (70), Expect = 0.14
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 73 PTAPKSPTRDAQRSALGTSGTPPHRGGS 100
P AP P D + G GTPP RG S
Sbjct: 919 PPAPAGPASDTEEEEPGPEGTPPSRGSS 946
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 19/62 (30%)
Query: 50 PPVDDTWLQV--------------QSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPP 95
PP+D ++ ++ Q H YQ + P PKS ALG+SGTPP
Sbjct: 253 PPMDSSYAKILQQQQLFLQLQILNQQQQQHHNYQAILPAPPKSAGE-----ALGSSGTPP 307
Query: 96 HR 97
R
Sbjct: 308 VR 309
>gi|157671951 solute carrier family 4, anion exchanger, member 3
isoform 1 [Homo sapiens]
Length = 1232
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 62 IPDAHRYQRLPPTAPKSPTRDAQR---SALGTSGTPP--HRGGSHLE 103
+P H+ +RLPPT+ + R ++ SA + GTPP GG+ ++
Sbjct: 89 LPPPHKLRRLPPTSARHTRRKRKKEKTSAPPSEGTPPIQEEGGAGVD 135
>gi|157671953 solute carrier family 4, anion exchanger, member 3
isoform 2 [Homo sapiens]
Length = 1259
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 62 IPDAHRYQRLPPTAPKSPTRDAQR---SALGTSGTPP--HRGGSHLE 103
+P H+ +RLPPT+ + R ++ SA + GTPP GG+ ++
Sbjct: 89 LPPPHKLRRLPPTSARHTRRKRKKEKTSAPPSEGTPPIQEEGGAGVD 135
>gi|157738687 WEE1 homolog 2 [Homo sapiens]
Length = 567
Score = 29.3 bits (64), Expect = 0.70
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 41 INRTTVTMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGS 100
I RT V+ P +T Q PD+ R + LP +P +P R + +G P RG
Sbjct: 80 ILRTPVSHPLKCPETPAQ----PDS-RSKLLPSDSPSTPKTMLSRLVISPTGKLPSRGPK 134
Query: 101 HLE 103
HL+
Sbjct: 135 HLK 137
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 29.3 bits (64), Expect = 0.70
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 42 NRTTVTMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRG 98
N++ T PPP Q +HR PP P P R + + G PPH G
Sbjct: 108 NQSQGTPPPPGKPERPPPQGGNQSHR----PPPPPGKPERPPPQGGNQSQGPPPHPG 160
>gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens]
Length = 1843
Score = 28.5 bits (62), Expect = 1.2
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 5 GNQNTLMEELAEQAQ-QHDEMLHMHHALKEALSIIGDINRTTVTMPPP-VDDTWLQVQSI 62
G L E A AQ Q+ E H+ ++ ++++G T T P P D +QS+
Sbjct: 999 GKAVPLAGEAAAPAQLQNTEKQEDSHSGQKGMAVLGKSEGATTTPPGPGAPDLLAAMQSL 1058
Query: 63 PDA------------HRYQRLP-PTAPKSPTRDAQRSALGTSGTPPHRGGS 100
A +++++ P PTA +P +D R A T GGS
Sbjct: 1059 RMATAEAQSLHQQVLNKHKQGPTPTATSNPIQDGLRKAGATQSNIRPGGGS 1109
>gi|7662058 tectonin beta-propeller repeat containing 2 [Homo
sapiens]
Length = 1411
Score = 28.5 bits (62), Expect = 1.2
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 9 TLMEELAEQAQQHDEMLHMHHA-----LKEALSIIGDINRTTV-TMPPPVDD----TWLQ 58
++ + LAE+ EM H HHA L A +G + T + P P DD T L
Sbjct: 555 SMPDSLAEEDDIRTEMPHCHHAHGRELLNGAREDVGGSDVTGLGDEPCPADDGPNSTQLP 614
Query: 59 VQ---SIPDAHRYQRLPPTAPKS 78
Q S P AH + + P P+S
Sbjct: 615 FQEQDSSPGAHDGEDIQPIGPQS 637
>gi|29826341 calmodulin binding transcription activator 2 [Homo
sapiens]
Length = 1202
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 50 PPVDDTWLQVQSIPDAHRYQ------RLPPTAPKSPTRDAQRSALGTSG----------T 93
P V+ L + SIP AH + LPP PK+ T + S+ +SG
Sbjct: 252 PKVEPRALTLTSIPHAHPPEPPPLIAPLPPELPKAHTSPSSSSSSSSSGFAEPLEIRPSP 311
Query: 94 PPHRGGS 100
P RGGS
Sbjct: 312 PTSRGGS 318
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 45 TVTMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 84
+V PPP D++ S P Y LP P RD++
Sbjct: 162 SVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 45 TVTMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 84
+V PPP D++ S P Y LP P RD++
Sbjct: 162 SVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 45 TVTMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 84
+V PPP D++ S P Y LP P RD++
Sbjct: 162 SVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,010,649
Number of Sequences: 37866
Number of extensions: 217568
Number of successful extensions: 947
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 876
Number of HSP's gapped (non-prelim): 83
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.