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Search of human proteins with 239745093
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 279 5e-76
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 79 2e-15
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 71 3e-13
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 71 3e-13
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 70 6e-13
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 70 6e-13
gi|17975763 myelin transcription factor 1 [Homo sapiens] 69 2e-12
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 68 3e-12
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 67 5e-12
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 64 4e-11
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 64 4e-11
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 63 7e-11
gi|21735569 claspin [Homo sapiens] 63 9e-11
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 62 1e-10
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 62 2e-10
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 62 2e-10
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 61 3e-10
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 61 3e-10
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 61 3e-10
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 61 4e-10
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 61 4e-10
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 60 5e-10
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 60 5e-10
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 60 6e-10
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 60 6e-10
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 60 6e-10
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 60 6e-10
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 60 8e-10
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa... 60 8e-10
gi|221219020 NYD-SP11 protein [Homo sapiens] 59 1e-09
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 279 bits (714), Expect = 5e-76
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MTAYGHSRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGT 60
MTAYGHSRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGT
Sbjct: 1 MTAYGHSRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGT 60
Query: 61 SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE
Sbjct: 61 SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
Query: 121 VSFSLATRERETETEEKRLISP 142
VSFSLATRERETETEEKRLISP
Sbjct: 121 VSFSLATRERETETEEKRLISP 142
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 78.6 bits (192), Expect = 2e-15
Identities = 37/76 (48%), Positives = 56/76 (73%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK + +++K +E ++R+EK EEK+R+ KR++K+EE+E EEEEEEEEEE+EEEE+EE
Sbjct: 37 RKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRR 96
Query: 123 FSLATRERETETEEKR 138
+ R E EE++
Sbjct: 97 RKKKKKRRRKEEEEEK 112
Score = 73.9 bits (180), Expect = 4e-14
Identities = 37/81 (45%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK +R+E++++++ + EKR+E++ E KR+ K ++K+EEEE EEEEEEEEEE+EEEE
Sbjct: 33 RKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKE 92
Query: 123 -----FSLATRERETETEEKR 138
R R+ E EEK+
Sbjct: 93 EGRRRKKKKKRRRKEEEEEKK 113
Score = 69.7 bits (169), Expect = 8e-13
Identities = 34/76 (44%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
+K + +E ++R+EK EEK+R+ KR++ K+ E+E E+EEEEEEEE+EEEE+EE +
Sbjct: 42 KKKKTKETEKRKEKEEEEKKRKRKRKK-KKEEEEREEEEEEEEEEKEEEEKEEGRRRKKK 100
Query: 123 FSLATRERETETEEKR 138
+E E E ++KR
Sbjct: 101 KKRRRKEEEEEKKKKR 116
Score = 68.2 bits (165), Expect = 2e-12
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 60 TSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEE-----------EEEEE 108
T + + +E +R+EKR+E+++ +EK+++ K EK +EKEEEE EEEE
Sbjct: 16 TEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEER 75
Query: 109 EEEEEEEEEEEEVSFSLATRERETETEEKR 138
EEEEEEEEEE+E R R+ + + +R
Sbjct: 76 EEEEEEEEEEKEEEEKEEGRRRKKKKKRRR 105
Score = 55.5 bits (132), Expect = 1e-08
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 60 TSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
T RK + EEK+R+ KR++ K+ EE+R E + E+EE++EEE+EE +++++ +E
Sbjct: 49 TEKRKEKEEEEKKRKRKRKK-KKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKE 107
Query: 120 EVSFSLATRERETE 133
E R R+T+
Sbjct: 108 EEEEKKKKRRRKTK 121
Score = 52.4 bits (124), Expect = 1e-07
Identities = 19/57 (33%), Positives = 42/57 (73%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
+K + EE+ EE+ EE++ EE++ EG+RR+K++++ +EEEEE++++ + +++
Sbjct: 67 KKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 52.0 bits (123), Expect = 2e-07
Identities = 21/58 (36%), Positives = 41/58 (70%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
RK ++ EE+R EE+ EE+ +EE+ +E RR K+++K +EEEEE++++ + +++
Sbjct: 66 RKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 47.0 bits (110), Expect = 5e-06
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KEE R + +R EE+ EE+ +EE+ +EE RR K+++K KEEEEE++
Sbjct: 55 KEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRR-KKKKKRRRKEEEEEKK 113
Query: 107 EEEEEEEEEE 116
++ + +++
Sbjct: 114 KKRRRKTKKK 123
Score = 42.0 bits (97), Expect = 2e-04
Identities = 17/75 (22%), Positives = 41/75 (54%)
Query: 40 TNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEK 99
T +EE + + + EE+ EE++ EE++ E +RR+ K++ + +E+
Sbjct: 49 TEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE 108
Query: 100 EEEEEEEEEEEEEEE 114
EEE++++ + +++
Sbjct: 109 EEEKKKKRRRKTKKK 123
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 71.2 bits (173), Expect = 3e-13
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 50 PPTLRHS---------MAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKE 100
PP L HS M+G SA + Q EE RRE +R E+ RE +R + REKE E+E
Sbjct: 203 PPELSHSSLAALHSERMSGLSAERLQMDEELRRERER--EREREREREADREREKERERE 260
Query: 101 EEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLIS 141
E+E E+E+E E E+E E E+ R+RE EK L++
Sbjct: 261 REKEREQEKEREREKERERELE-----RQREQRAREKELLA 296
Score = 46.6 bits (109), Expect = 7e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
E ++GL+ + EE R + RE ++ E+ RE++R +EK RE R
Sbjct: 217 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---R 273
Query: 94 EKEEEKEEEEEEEEEEEEEE 113
EKE E+E E + E+ E+E
Sbjct: 274 EKERERELERQREQRAREKE 293
Score = 32.0 bits (71), Expect = 0.18
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
R+ ++ + + EEEEEE++E+ E+EEEV
Sbjct: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEEV 1014
Score = 31.6 bits (70), Expect = 0.23
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 87 RREGKRREKEEEKEEEEEEEEEEEEEEEE 115
R+ +E + + EEEEEE++E+ E+EEE
Sbjct: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1013
Score = 31.6 bits (70), Expect = 0.23
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEE 116
R+G ++ + EEEEEE++E+ E+EEE
Sbjct: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1013
Score = 30.8 bits (68), Expect = 0.39
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 82 RREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
R+ +E R +EEE+E++E+ E+EEE + + + E F E + E++++
Sbjct: 985 RKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVL 1043
Score = 28.9 bits (63), Expect = 1.5
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
++EPPT R + EE+ +E +E+ +++ +G E +E EE+
Sbjct: 978 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQN 1037
Query: 107 EEEEEEEEE---EEEEEVSFSLATRERETETEEKR 138
E + + + E S SL + E R
Sbjct: 1038 LERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELR 1072
Score = 26.2 bits (56), Expect = 9.7
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 78 REEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
+ R + G++ K +E + + EEEEEE++E+
Sbjct: 965 QSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDED 1007
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 71.2 bits (173), Expect = 3e-13
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 50 PPTLRHS---------MAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKE 100
PP L HS M+G SA + Q EE RRE +R E+ RE +R + REKE E+E
Sbjct: 307 PPELSHSSLAALHSERMSGLSAERLQMDEELRRERER--EREREREREADREREKERERE 364
Query: 101 EEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLIS 141
E+E E+E+E E E+E E E+ R+RE EK L++
Sbjct: 365 REKEREQEKEREREKERERELE-----RQREQRAREKELLA 400
Score = 46.6 bits (109), Expect = 7e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
E ++GL+ + EE R + RE ++ E+ RE++R +EK RE R
Sbjct: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---R 377
Query: 94 EKEEEKEEEEEEEEEEEEEE 113
EKE E+E E + E+ E+E
Sbjct: 378 EKERERELERQREQRAREKE 397
Score = 32.0 bits (71), Expect = 0.18
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
R+ ++ + + EEEEEE++E+ E+EEEV
Sbjct: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEEV 1118
Score = 31.6 bits (70), Expect = 0.23
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 87 RREGKRREKEEEKEEEEEEEEEEEEEEEE 115
R+ +E + + EEEEEE++E+ E+EEE
Sbjct: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1117
Score = 31.6 bits (70), Expect = 0.23
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEE 116
R+G ++ + EEEEEE++E+ E+EEE
Sbjct: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1117
Score = 30.8 bits (68), Expect = 0.39
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 82 RREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
R+ +E R +EEE+E++E+ E+EEE + + + E F E + E++++
Sbjct: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVL 1147
Score = 28.9 bits (63), Expect = 1.5
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
++EPPT R + EE+ +E +E+ +++ +G E +E EE+
Sbjct: 1082 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQN 1141
Query: 107 EEEEEEEEE---EEEEEVSFSLATRERETETEEKR 138
E + + + E S SL + E R
Sbjct: 1142 LERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELR 1176
Score = 26.2 bits (56), Expect = 9.7
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 78 REEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
+ R + G++ K +E + + EEEEEE++E+
Sbjct: 1069 QSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDED 1111
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 70.1 bits (170), Expect = 6e-13
Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
K+E R A + R +++RE++RRE++RRE++RRE++RRE +RRE+E + E+E
Sbjct: 667 KKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRR 726
Query: 107 EEEE-EEEEEEEEEEVSFSLATRERETETEEKR 138
E+E + E E +E E + L + + E EEK+
Sbjct: 727 EQERLQAERELQEREKALRLQKEQLQRELEEKK 759
Score = 58.9 bits (141), Expect = 1e-09
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Query: 63 RKSQRREEKRREEKRREEKRRE--------EKRREGKRREKEEEKEEEEE----EEEEEE 110
R+ +RRE++RRE++RRE++RRE E+RRE +R + E E +E E+ ++E+ +
Sbjct: 693 REQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQ 752
Query: 111 EEEEEEEEEEVSFSLATRERETETEEK 137
E EE++++E LA R+ + E E+K
Sbjct: 753 RELEEKKKKEEQQRLAERQLQEEQEKK 779
Score = 54.3 bits (129), Expect = 3e-08
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEE 105
+++E RH ++ ++ ++ E +R ++RE++RRE +RRE+E ++E E+
Sbjct: 651 LQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQ 710
Query: 106 EEEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
E E+E + E+E ERE + EK L
Sbjct: 711 ERREQERQLAEQERRREQERLQAERELQEREKAL 744
Score = 52.0 bits (123), Expect = 2e-07
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
+EE LR R+ Q +K++EE++ ++ E +R ++RE+E ++E E+E
Sbjct: 642 EEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQE 701
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETE 135
E+E E+E E+ LA +ER E E
Sbjct: 702 RREQERREQERREQ-ERQLAEQERRREQE 729
Score = 46.2 bits (108), Expect = 9e-06
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
+ A + T KEE + +A+K + E +R++E+ R ++ E +R
Sbjct: 601 QKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRH 660
Query: 94 EKEEEKEEEEEEE-------------EEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
++ +K++EEE+E + E+E E+E E+ RE+E +E++L
Sbjct: 661 QELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQL 719
Score = 43.1 bits (100), Expect = 8e-05
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 63 RKSQRREEKRR--EEK-----RREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE-- 113
R Q +EEK++ E+K + EK +EE+ E K ++K K+ EE E ++EEE
Sbjct: 587 RVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEAR 646
Query: 114 -----EEEEEEEVSFSLATRERETETEEKR 138
++EEEE L +++E E E R
Sbjct: 647 RLRWLQQEEEERRHQELLQKKKEEEQERLR 676
Score = 42.4 bits (98), Expect = 1e-04
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 40/103 (38%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKR------------------------------ 92
R+ +RRE++RRE++RRE++RRE++RRE +R
Sbjct: 688 REQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQ 747
Query: 93 ----------REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSL 125
++K+EE++ E + +EE+E++ +E S +L
Sbjct: 748 KEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKAL 790
Score = 42.0 bits (97), Expect = 2e-04
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 23 LSTFPYPHSKRENLAGLTNSTSSV-----KEEPPTLRHSMAGTSARKSQRREEKRREEKR 77
L TF + + + L T++ SV K P ++ QR E RR+E+
Sbjct: 492 LRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKCSFVEKERQRLENLRRKEEA 551
Query: 78 REEKRREEKRREGKRREKEEEKEEEEE------EEEEEEEEEEEEEEEEVSFSLATRERE 131
E+ R +K E KRR EE K + EE + E E+ +EE+++++ A + +
Sbjct: 552 --EQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEK 609
Query: 132 TE-TEEKRL 139
TE +E+RL
Sbjct: 610 TEKAKEERL 618
Score = 40.8 bits (94), Expect = 4e-04
Identities = 20/60 (33%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 62 ARKSQRREEKRREEKRREEKRREEKR--REGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
A + +RRE++R + +R ++R + R +E +RE EE+K++EE++ E + +EE+E++
Sbjct: 720 AEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKK 779
Score = 39.7 bits (91), Expect = 8e-04
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KEE LR R+ + +REE+ R+ + E+ + K +K++ +++ + +
Sbjct: 548 KEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQID 607
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+ E+ +EE EE + A ++ E E +R
Sbjct: 608 EKTEKAKEERLAEEKAKKKAAAKKMEEVEARR 639
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 70.1 bits (170), Expect = 6e-13
Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
K+E R A + R +++RE++RRE++RRE++RRE++RRE +RRE+E + E+E
Sbjct: 663 KKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRR 722
Query: 107 EEEE-EEEEEEEEEEVSFSLATRERETETEEKR 138
E+E + E E +E E + L + + E EEK+
Sbjct: 723 EQERLQAERELQEREKALRLQKEQLQRELEEKK 755
Score = 58.9 bits (141), Expect = 1e-09
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Query: 63 RKSQRREEKRREEKRREEKRRE--------EKRREGKRREKEEEKEEEEE----EEEEEE 110
R+ +RRE++RRE++RRE++RRE E+RRE +R + E E +E E+ ++E+ +
Sbjct: 689 REQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQ 748
Query: 111 EEEEEEEEEEVSFSLATRERETETEEK 137
E EE++++E LA R+ + E E+K
Sbjct: 749 RELEEKKKKEEQQRLAERQLQEEQEKK 775
Score = 54.3 bits (129), Expect = 3e-08
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEE 105
+++E RH ++ ++ ++ E +R ++RE++RRE +RRE+E ++E E+
Sbjct: 647 LQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQ 706
Query: 106 EEEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
E E+E + E+E ERE + EK L
Sbjct: 707 ERREQERQLAEQERRREQERLQAERELQEREKAL 740
Score = 52.0 bits (123), Expect = 2e-07
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
+EE LR R+ Q +K++EE++ ++ E +R ++RE+E ++E E+E
Sbjct: 638 EEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQE 697
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETE 135
E+E E+E E+ LA +ER E E
Sbjct: 698 RREQERREQERREQ-ERQLAEQERRREQE 725
Score = 46.2 bits (108), Expect = 9e-06
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
+ A + T KEE + +A+K + E +R++E+ R ++ E +R
Sbjct: 597 QKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRH 656
Query: 94 EKEEEKEEEEEEE-------------EEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
++ +K++EEE+E + E+E E+E E+ RE+E +E++L
Sbjct: 657 QELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQL 715
Score = 43.1 bits (100), Expect = 8e-05
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 63 RKSQRREEKRR--EEK-----RREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE-- 113
R Q +EEK++ E+K + EK +EE+ E K ++K K+ EE E ++EEE
Sbjct: 583 RVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEAR 642
Query: 114 -----EEEEEEEVSFSLATRERETETEEKR 138
++EEEE L +++E E E R
Sbjct: 643 RLRWLQQEEEERRHQELLQKKKEEEQERLR 672
Score = 42.4 bits (98), Expect = 1e-04
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 40/103 (38%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKR------------------------------ 92
R+ +RRE++RRE++RRE++RRE++RRE +R
Sbjct: 684 REQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQ 743
Query: 93 ----------REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSL 125
++K+EE++ E + +EE+E++ +E S +L
Sbjct: 744 KEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKAL 786
Score = 40.8 bits (94), Expect = 4e-04
Identities = 20/60 (33%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 62 ARKSQRREEKRREEKRREEKRREEKR--REGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
A + +RRE++R + +R ++R + R +E +RE EE+K++EE++ E + +EE+E++
Sbjct: 716 AEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKK 775
Score = 40.0 bits (92), Expect = 7e-04
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEE------EEEEEEEEEEEE 116
++ QR E RR+E+ E+ R +K E KRR EE K + EE + E E+ +EE
Sbjct: 533 KERQRLENLRRKEEA--EQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEE 590
Query: 117 EEEEVSFSLATRERETE-TEEKRL 139
+++++ A + +TE +E+RL
Sbjct: 591 KKKQIEQKFAQIDEKTEKAKEERL 614
Score = 39.7 bits (91), Expect = 8e-04
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KEE LR R+ + +REE+ R+ + E+ + K +K++ +++ + +
Sbjct: 544 KEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQID 603
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+ E+ +EE EE + A ++ E E +R
Sbjct: 604 EKTEKAKEERLAEEKAKKKAAAKKMEEVEARR 635
Score = 35.4 bits (80), Expect = 0.016
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 57 MAGTSARKS------QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEE 110
M TSA +S +R R + K +E +R E RR K ++ +++ EE++
Sbjct: 506 MTPTSAPRSVMKSFIKRNTPLRMDPKEKERQRLENLRR--KEEAEQLRRQKVEEDKRRRL 563
Query: 111 EEEEEEEEEEVSFSLATRERETETEEKR 138
EE + + EE + L RER + +E++
Sbjct: 564 EEVKLKREERLRKVLQARERVEQMKEEK 591
Score = 34.3 bits (77), Expect = 0.036
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 63 RKSQRREEKRREEKRREEKRR--EEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
R+ + E+ RR++ +++RR E K + +R K + E E+ +EE++++ E++ +
Sbjct: 542 RRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQ 601
Query: 121 VSFSLATRERETETEEK 137
+ + E EEK
Sbjct: 602 IDEKTEKAKEERLAEEK 618
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 68.6 bits (166), Expect = 2e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 51 PTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEE 110
P A + K + E++ EE+ EE+ E + E+EEE+EEEEEEEEEEE
Sbjct: 237 PQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 296
Query: 111 EEEEEEEEEEVSFSLATRERETETEEKR 138
EEEEEEEEEE + + +E + T ++
Sbjct: 297 EEEEEEEEEEAAPDVIFQEDTSHTSAQK 324
Score = 67.8 bits (164), Expect = 3e-12
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 50 PPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEE 109
P +L + + S+++ + +E+ EE+ EE+ E + E+EEE+EEEEEEEEEE
Sbjct: 237 PQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 296
Query: 110 EEEEEEEEEE 119
EEEEEEEEEE
Sbjct: 297 EEEEEEEEEE 306
Score = 62.4 bits (150), Expect = 1e-10
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 61 SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
+ +SQ + E+ EE +++ + ++EEE+EEEEEEE+EEEEEEEEEEEEE
Sbjct: 228 TTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEE 287
Query: 121 VSFSLATRERETETEEKRLISP 142
E E E EE+ +P
Sbjct: 288 EEEEEEEEEEEEEEEEEEEAAP 309
Score = 58.5 bits (140), Expect = 2e-09
Identities = 33/89 (37%), Positives = 46/89 (51%)
Query: 49 EPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE 108
+P + T+ R + + E +++ + E+EEE+EEEEEE+EE
Sbjct: 217 QPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEE 276
Query: 109 EEEEEEEEEEEEVSFSLATRERETETEEK 137
EEEEEEEEEEEE E E E EE+
Sbjct: 277 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 305
Score = 57.0 bits (136), Expect = 5e-09
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
+ + EE+ EE+ EE+ EE+ E + E+EEE+EEEEEEEEEEE + +E+ S
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSH 319
Query: 124 SLATRERETETEE 136
+ A + E E
Sbjct: 320 TSAQKAPELRGPE 332
Score = 49.7 bits (117), Expect = 8e-07
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 45 SVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEE 104
+ EE + ++ + + EE+ EE EE+ EE+ E + E+EEE+EEEEE
Sbjct: 243 AASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
Query: 105 EEEE 108
EEEE
Sbjct: 303 EEEE 306
Score = 49.7 bits (117), Expect = 8e-07
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
+ + EE+ E++ EE+ EE+ E + E+EEE+EEEEEEEE + +E+ S
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSA 322
Query: 124 SLATRERETET 134
A R E+
Sbjct: 323 QKAPELRGPES 333
Score = 40.0 bits (92), Expect = 7e-04
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
+ + EE EE+ EE+ EE+ E + E+EEE+EEEE + +E+ + +
Sbjct: 267 EEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAP 326
Query: 124 SLATRERETETEEKRLI 140
L E + E +I
Sbjct: 327 ELRGPESPSPKPEYSVI 343
Score = 38.1 bits (87), Expect = 0.002
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 17 ENDRILLSTFPYPHSKRENLAGLTNSTSS---VKEEPPTLRHSMAGTSARKSQRREEKRR 73
EN + LS + H KREN ++S SS VK + RHS TSA S +
Sbjct: 665 ENGTLDLSM--HKHRKRENAFPSSSSCSSSPGVKSPDASQRHS--STSAPSSSMTSPQSS 720
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
+ R++E R + R +EE +E E E +++E E +F
Sbjct: 721 QASRQDEWDRPLDYTKPSRLREEEPEESEPAAHSFASSEADDQEVSEENF 770
Score = 28.1 bits (61), Expect = 2.6
Identities = 18/85 (21%), Positives = 39/85 (45%)
Query: 53 LRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEE 112
L+ + G ++ + ++ + E+ + E+ ++ + E+ EE +++
Sbjct: 198 LQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSH 257
Query: 113 EEEEEEEEVSFSLATRERETETEEK 137
EEE+EEEE + E E EE+
Sbjct: 258 EEEDEEEEEEEEEEEEDEEEEEEEE 282
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 67.8 bits (164), Expect = 3e-12
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 11/106 (10%)
Query: 44 SSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEE 103
S ++E + G R+S+R++E+R EKR+ E+ +E KR GK+ +K E K+EE
Sbjct: 36 SEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEER 95
Query: 104 E-----------EEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E E EE+E+ +++E++E S +ERE + E KR
Sbjct: 96 ERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKR 141
Score = 66.2 bits (160), Expect = 8e-12
Identities = 32/107 (29%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
++EN G KE+ R S G ++ +R+EE++REE++ E+++EE+ +E +
Sbjct: 103 EKENKEGEEKEKRKKKEKKERGRTSKEG---KERERKEERKREERKERERKKEEREKERE 159
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
R+E+++ + ++ E+EEE +E+E +E ++ + R++E E +E+R
Sbjct: 160 RKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERR 206
Score = 61.2 bits (147), Expect = 3e-10
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 17/109 (15%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREE------------KRREEKRR-----E 89
K E R G +K +R++E+R +KRR E K++E+K R E
Sbjct: 70 KREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKE 129
Query: 90 GKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
GK RE++EE++ EE +E E ++EE E+E E R++ E EE+R
Sbjct: 130 GKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEER 178
Score = 58.5 bits (140), Expect = 2e-09
Identities = 25/71 (35%), Positives = 49/71 (69%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
+K +R++ +EE+R+E++R+E K+RE R+E+++E+E +E E ++E +++EE ++E
Sbjct: 164 KKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQ 223
Query: 123 FSLATRERETE 133
T RE E
Sbjct: 224 KDRQTNWREKE 234
Score = 56.2 bits (134), Expect = 9e-09
Identities = 25/78 (32%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 63 RKSQRREEKRREEKR---REEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
++ +R+E K+RE K+ +EE+R+E++R+E K+RE+ ++ ++E E +E E ++E +++
Sbjct: 156 KERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKK 215
Query: 120 EVSFSLATRERETETEEK 137
E ++R+T EK
Sbjct: 216 EERKKERQKDRQTNWREK 233
Score = 55.1 bits (131), Expect = 2e-08
Identities = 23/72 (31%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 68 REEKRREEKRREEKRREEKRREGKR-REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLA 126
+EE+R+E++R+E K+RE R+E K+ RE++E +E ++E +++EE ++E +++ + ++
Sbjct: 174 KEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREK 233
Query: 127 TRERETETEEKR 138
R + E K+
Sbjct: 234 ERGKRERKERKK 245
Score = 54.7 bits (130), Expect = 3e-08
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKR--REEKRREEKRREEKRRE 89
K + G T+ +E + RK + RE++R +E K+RE K+ EK E
Sbjct: 118 KEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEE 177
Query: 90 GKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
K +E++E K+ E +E ++E E +E E ER+ E ++ R
Sbjct: 178 RKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDR 226
Score = 53.9 bits (128), Expect = 4e-08
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 11/87 (12%)
Query: 63 RKSQRREEKRREEKRREEKRREEKR------REGKRREKEEEKEEEEEEE-----EEEEE 111
RK +RRE++ +E + +E+++++EK+ +EGK RE++EE++ EE +E EE E+
Sbjct: 97 RKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREK 156
Query: 112 EEEEEEEEEVSFSLATRERETETEEKR 138
E E +E ++ + E E++R
Sbjct: 157 ERERKERKKRERKQVGEKEEERKEKER 183
Score = 53.9 bits (128), Expect = 4e-08
Identities = 21/68 (30%), Positives = 46/68 (67%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
K + R+EK R+E+++ E+ R+E+++E +R+E+ E K+E +++EE ++E +++ +
Sbjct: 174 KEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREK 233
Query: 124 SLATRERE 131
RER+
Sbjct: 234 ERGKRERK 241
Score = 52.8 bits (125), Expect = 1e-07
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK +E+ R+EK R+E+++ E+ R K R+KE E++E E ++E +++EE ++E +
Sbjct: 168 RKQVGEKEEERKEKERKERKKRERNR--KERKKERERKERRERKKERKKKEERKKERQKD 225
Query: 123 FSLATRERETETEEKR 138
RE+E E++
Sbjct: 226 RQTNWREKERGKRERK 241
Score = 50.8 bits (120), Expect = 4e-07
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEE---EEEEEEEEEEE 120
+S+ RE +R E R+E K+ E R+ +RRE+E+ K E E+E + E +E++ E ++EE
Sbjct: 35 QSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEE 94
Query: 121 VSFSLATRERET-ETEEK 137
RE+E E EEK
Sbjct: 95 RERKKRRREKENKEGEEK 112
Score = 48.9 bits (115), Expect = 1e-06
Identities = 20/69 (28%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK + R+E+++ E+ R+E+++E +R+E RRE+++E++++EE ++E +++ + E+
Sbjct: 178 RKEKERKERKKRERNRKERKKERERKE--RRERKKERKKKEERKKERQKDRQTNWREKER 235
Query: 123 FSLATRERE 131
+ER+
Sbjct: 236 GKRERKERK 244
Score = 44.3 bits (103), Expect = 3e-05
Identities = 15/58 (25%), Positives = 40/58 (68%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
++ + R+E+++E +R+E + R+++R++ + R+KE +K+ + E+E + E +E ++
Sbjct: 188 KRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 40.0 bits (92), Expect = 7e-04
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KE+ R + + RE K R E+++E K++EE+++E ++ + +E+E +
Sbjct: 179 KEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKR 238
Query: 107 EEEEEEE 113
E +E ++
Sbjct: 239 ERKERKK 245
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 67.0 bits (162), Expect = 5e-12
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 50 PPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEE 109
PP L + + S EE+ EE+ EE+ EE+ + E EEE EEEEEEEEE
Sbjct: 871 PPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEE 930
Query: 110 EEEEEEEEEEEVSFSLATRERETETEEKRL 139
EEE EEEE E+ E E E EE+ L
Sbjct: 931 FEEEFEEEEGELE---EEEEEEDEEEEEEL 957
Score = 60.8 bits (146), Expect = 4e-10
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 25 TFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRRE 84
T P P E G +++E+ + + + + + EE+ EE+ EE E
Sbjct: 854 TLPPPQLVPEGTPG-GGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEE 912
Query: 85 EKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEE 136
E+ E + E+EEE+EEE EEE EEEE E EEEEEE E E E EE
Sbjct: 913 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEE-----EDEEEEEELEE 959
Score = 55.8 bits (133), Expect = 1e-08
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 29 PHSKRENLAGLT-NSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKR 87
P + E+L + NS+ +EE + EE+ EE+ EE+ EE+
Sbjct: 871 PPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEE 930
Query: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERE 131
E + E+E E EEEEEE E+EEEEEE EE E++ F A E E
Sbjct: 931 FEEEFEEEEGELEEEEEE-EDEEEEEELEEVEDLEFGTAGGEVE 973
Score = 37.7 bits (86), Expect = 0.003
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 69 EEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
EE+ EE+ EE EE E + E++EE+EEE EE E+ E E EE
Sbjct: 923 EEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 32.0 bits (71), Expect = 0.18
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEE 116
+ + EE+ EE+ EE+ E+ E + E+EEE EE E+ E E EE
Sbjct: 922 EEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 29.6 bits (65), Expect = 0.88
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEE 117
+ EE+ E+ EE+ E + E + E+EEE+ EE E+ E E EE
Sbjct: 923 EEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 27.7 bits (60), Expect = 3.3
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 16 PENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREE 75
PE + LL P ++ E A T T + + P G S +E EE
Sbjct: 999 PEPEPGLLLEVEEPGTEEERGAD-TAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEE 1057
Query: 76 KRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE--EEEEEEEVSFSLA 126
EE+ +G + + + EEE E E E E +E+E+++ + LA
Sbjct: 1058 PSAPPTLLEEETEDGSDKVQPPPETPAEEEMETETEAEALQEKEQDDTAAMLA 1110
Score = 26.2 bits (56), Expect = 9.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 85 EKRREGKRREKEEEKEEEEEEEE-------EEEEEEEEEEEEEVSFSLATRERETETEEK 137
E REG+ +E EEE EEE E+ ++ + + A E ETETE +
Sbjct: 1036 EVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEMETETEAE 1095
Query: 138 RL 139
L
Sbjct: 1096 AL 1097
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 63.9 bits (154), Expect = 4e-11
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 61 SARKSQRREEKR---REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEE 117
SA+K++ E +R +++KRR K +E+ E K +EEE+E+EEEEEEEEEEEEEEE+
Sbjct: 1368 SAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
Query: 118 EEEVSFS 124
E + S S
Sbjct: 1428 ENDDSKS 1434
Score = 61.2 bits (147), Expect = 3e-10
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 60 TSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
T + K EE +R K+++++RR + + + K +EEEEE+EEEEEEEEEEEEEE
Sbjct: 1366 TRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEE 1425
Query: 120 E 120
E
Sbjct: 1426 E 1426
Score = 54.3 bits (129), Expect = 3e-08
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 37 AGLTNSTSSVKEEPPTLRHSMAGTSARKSQR--REEKRREEKRREEKRREEKRREGKRRE 94
+G++ S ++E S ++QR +++K+R + +E E + + E
Sbjct: 1349 SGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE 1408
Query: 95 KEEEKEEEEEEEEEEEEEEEEEEEE 119
+E+E+EEEEEEEEEEEEE+E ++ +
Sbjct: 1409 EEKEEEEEEEEEEEEEEEDENDDSK 1433
Score = 52.4 bits (124), Expect = 1e-07
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 58 AGTSARKSQRREEKRR----------EEKRREEKRREEKRREGKRREKEEEKEEEEEEEE 107
+G S S+ +E+R EE +R K+++++RR + + E + EEEE
Sbjct: 1349 SGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE 1408
Query: 108 EEEEEEEEEEEEEVSFSLATRERETETEEKR 138
EE+EEEEEEEEEE E E E ++ +
Sbjct: 1409 EEKEEEEEEEEEE------EEEEEDENDDSK 1433
Score = 50.1 bits (118), Expect = 6e-07
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 33 RENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKR 92
R ++ + S +E + S + R R +K E+ + ++++KRR K
Sbjct: 1333 RRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKV 1392
Query: 93 REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLISP 142
+E + + EEEEEE+EEEEEEEEE E E E E SP
Sbjct: 1393 QEDSSSENKSNSEEEEEEKEEEEEEEEE-------EEEEEEDENDDSKSP 1435
Score = 48.1 bits (113), Expect = 2e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 26/96 (27%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEE------- 115
+K +RR K +E+ E K E+ E K E+EEE+EEEEEEEE+E ++ +
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKE-EEEEEEEEEEEEEEDENDDSKSPGKGRKK 1441
Query: 116 ------------------EEEEEVSFSLATRERETE 133
+EEEE +A RERE E
Sbjct: 1442 IRKILKDDKLRTETQNALKEEEERRKRIAERERERE 1477
Score = 40.8 bits (94), Expect = 4e-04
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEE 105
V+E+ + S + + + EE+ EE+ EE ++ + GK R+K + ++++
Sbjct: 1392 VQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKL 1451
Query: 106 EEEEEEEEEEEEEEEVSFSLATRERE 131
E + +EEEE + RERE
Sbjct: 1452 RTETQNALKEEEERRKRIAERERERE 1477
Score = 33.5 bits (75), Expect = 0.061
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
+N + + S + + P RH + K + + EEK+ + K +E + +R+
Sbjct: 1279 KNQVNSESDSDSEESKKPRYRHRLL---RHKLTVSDGESGEEKKTKPKEHKEVKGRNRRK 1335
Query: 94 EKEEEKEEEE-------EEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+ E+ + EE E E+E+ L +R + ++KR
Sbjct: 1336 VSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKR 1387
Score = 32.3 bits (72), Expect = 0.14
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 53 LRHSMAGTSARKSQRREEKRREEKR-REEKRREEKRREGKRREKEEEKEEEEEEEEEEEE 111
LRH + + + ++ K +E K + RR+ + + + +E EE E E+E+
Sbjct: 1303 LRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQ 1362
Query: 112 -------EEEEEEEEEVSFSLATRERETETEE 136
++ E EE + S+ + R + +E
Sbjct: 1363 RPRTRSAKKAELEENQRSYKQKKKRRRIKVQE 1394
Score = 30.0 bits (66), Expect = 0.67
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE 108
+++K R E + K EE+R+ RE+E EK E E E+
Sbjct: 1447 KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIED 1487
Score = 29.6 bits (65), Expect = 0.88
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
E+ +++ E K+R GK+ E+ EE + + E + + EE ++
Sbjct: 1250 EDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKK 1295
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRR----EEKRREEKRREEKR 87
+R NL+ N+ + + + +K QR K++ +EK+R R KR
Sbjct: 1098 ERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKR 1157
Query: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSL 125
++ E++++ E +E++ + V+ +L
Sbjct: 1158 KQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENL 1195
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
K EE + E+ +++ EGK+R ++ +E +EE + + E + + E S
Sbjct: 1235 KKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESK 1294
Query: 124 SLATRER 130
R R
Sbjct: 1295 KPRYRHR 1301
Score = 28.1 bits (61), Expect = 2.6
Identities = 18/106 (16%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAG----TSARKSQRREEKRREEKRREEKRREEKRRE 89
E+L + +V +E T H + T ARK ++ +++ + E + K+ +
Sbjct: 373 EDLNSEFRAMDAVNKEKNTKEHKVIDAKFETKARKGEKPCALEKKDISKSEAKLSRKQVD 432
Query: 90 GKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETE 135
+ + EE+ + E ++ + +EE + A + + +
Sbjct: 433 SEHMHQNVPTEEQRTNKSTGGEHKKSDRKEEPQYEPANTSEDLDMD 478
Score = 26.6 bits (57), Expect = 7.4
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
KR L G ++ T ++SM S +R +R E R E+R +R K
Sbjct: 1054 KRCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKR--LKRIELR--ERRNLSSKRNTK 1109
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERET-ETEEKR 138
+ + EE E+ +++++ ++ + + ++R + T KR
Sbjct: 1110 EIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKR 1157
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 63.9 bits (154), Expect = 4e-11
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 61 SARKSQRREEKR---REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEE 117
SA+K++ E +R +++KRR K +E+ E K +EEE+E+EEEEEEEEEEEEEEE+
Sbjct: 1406 SAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
Query: 118 EEEVSFS 124
E + S S
Sbjct: 1466 ENDDSKS 1472
Score = 61.2 bits (147), Expect = 3e-10
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 60 TSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
T + K EE +R K+++++RR + + + K +EEEEE+EEEEEEEEEEEEEE
Sbjct: 1404 TRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEE 1463
Query: 120 E 120
E
Sbjct: 1464 E 1464
Score = 54.3 bits (129), Expect = 3e-08
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 37 AGLTNSTSSVKEEPPTLRHSMAGTSARKSQR--REEKRREEKRREEKRREEKRREGKRRE 94
+G++ S ++E S ++QR +++K+R + +E E + + E
Sbjct: 1387 SGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE 1446
Query: 95 KEEEKEEEEEEEEEEEEEEEEEEEE 119
+E+E+EEEEEEEEEEEEE+E ++ +
Sbjct: 1447 EEKEEEEEEEEEEEEEEEDENDDSK 1471
Score = 52.4 bits (124), Expect = 1e-07
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 58 AGTSARKSQRREEKRR----------EEKRREEKRREEKRREGKRREKEEEKEEEEEEEE 107
+G S S+ +E+R EE +R K+++++RR + + E + EEEE
Sbjct: 1387 SGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE 1446
Query: 108 EEEEEEEEEEEEEVSFSLATRERETETEEKR 138
EE+EEEEEEEEEE E E E ++ +
Sbjct: 1447 EEKEEEEEEEEEE------EEEEEDENDDSK 1471
Score = 50.1 bits (118), Expect = 6e-07
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 33 RENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKR 92
R ++ + S +E + S + R R +K E+ + ++++KRR K
Sbjct: 1371 RRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKV 1430
Query: 93 REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLISP 142
+E + + EEEEEE+EEEEEEEEE E E E E SP
Sbjct: 1431 QEDSSSENKSNSEEEEEEKEEEEEEEEE-------EEEEEEDENDDSKSP 1473
Score = 48.1 bits (113), Expect = 2e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 26/96 (27%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEE------- 115
+K +RR K +E+ E K E+ E K E+EEE+EEEEEEEE+E ++ +
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKE-EEEEEEEEEEEEEEDENDDSKSPGKGRKK 1479
Query: 116 ------------------EEEEEVSFSLATRERETE 133
+EEEE +A RERE E
Sbjct: 1480 IRKILKDDKLRTETQNALKEEEERRKRIAERERERE 1515
Score = 40.8 bits (94), Expect = 4e-04
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEE 105
V+E+ + S + + + EE+ EE+ EE ++ + GK R+K + ++++
Sbjct: 1430 VQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKL 1489
Query: 106 EEEEEEEEEEEEEEEVSFSLATRERE 131
E + +EEEE + RERE
Sbjct: 1490 RTETQNALKEEEERRKRIAERERERE 1515
Score = 33.5 bits (75), Expect = 0.061
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
+N + + S + + P RH + K + + EEK+ + K +E + +R+
Sbjct: 1317 KNQVNSESDSDSEESKKPRYRHRLL---RHKLTVSDGESGEEKKTKPKEHKEVKGRNRRK 1373
Query: 94 EKEEEKEEEE-------EEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+ E+ + EE E E+E+ L +R + ++KR
Sbjct: 1374 VSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKR 1425
Score = 32.3 bits (72), Expect = 0.14
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 53 LRHSMAGTSARKSQRREEKRREEKR-REEKRREEKRREGKRREKEEEKEEEEEEEEEEEE 111
LRH + + + ++ K +E K + RR+ + + + +E EE E E+E+
Sbjct: 1341 LRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQ 1400
Query: 112 -------EEEEEEEEEVSFSLATRERETETEE 136
++ E EE + S+ + R + +E
Sbjct: 1401 RPRTRSAKKAELEENQRSYKQKKKRRRIKVQE 1432
Score = 30.0 bits (66), Expect = 0.67
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE 108
+++K R E + K EE+R+ RE+E EK E E E+
Sbjct: 1485 KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIED 1525
Score = 29.6 bits (65), Expect = 0.88
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
E+ +++ E K+R GK+ E+ EE + + E + + EE ++
Sbjct: 1288 EDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKK 1333
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRR----EEKRREEKRREEKR 87
+R NL+ N+ + + + +K QR K++ +EK+R R KR
Sbjct: 1136 ERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKR 1195
Query: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSL 125
++ E++++ E +E++ + V+ +L
Sbjct: 1196 KQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENL 1233
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
K EE + E+ +++ EGK+R ++ +E +EE + + E + + E S
Sbjct: 1273 KKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESK 1332
Query: 124 SLATRER 130
R R
Sbjct: 1333 KPRYRHR 1339
Score = 28.1 bits (61), Expect = 2.6
Identities = 18/106 (16%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAG----TSARKSQRREEKRREEKRREEKRREEKRRE 89
E+L + +V +E T H + T ARK ++ +++ + E + K+ +
Sbjct: 411 EDLNSEFRAMDAVNKEKNTKEHKVIDAKFETKARKGEKPCALEKKDISKSEAKLSRKQVD 470
Query: 90 GKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETE 135
+ + EE+ + E ++ + +EE + A + + +
Sbjct: 471 SEHMHQNVPTEEQRTNKSTGGEHKKSDRKEEPQYEPANTSEDLDMD 516
Score = 26.6 bits (57), Expect = 7.4
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
KR L G ++ T ++SM S +R +R E R E+R +R K
Sbjct: 1092 KRCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKR--LKRIELR--ERRNLSSKRNTK 1147
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERET-ETEEKR 138
+ + EE E+ +++++ ++ + + ++R + T KR
Sbjct: 1148 EIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKR 1195
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 63.2 bits (152), Expect = 7e-11
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 81 KRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRE 129
K EE+ E + E+E+E+EEEEEEEEEEEEEEEEEEEEE + ++A E
Sbjct: 732 KEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGE 780
Score = 58.2 bits (139), Expect = 2e-09
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 7/53 (13%)
Query: 85 EKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEK 137
+ + GK E+EEE++EEEEEE+EEEEEEEEEEEEE E E E EE+
Sbjct: 726 QPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEE-------EEEEEEEEEE 771
Score = 57.8 bits (138), Expect = 3e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 79 EEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSL 125
+E+ EE+ E + E EEE+EEEEEEEEEEEEEEEEEEE + +L
Sbjct: 732 KEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVAL 778
Score = 56.6 bits (135), Expect = 7e-09
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 78 REEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEE 117
+EE+ EE+ E + ++EEE+EEEEEEEEEEEEEEEEEE
Sbjct: 732 KEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771
Score = 56.2 bits (134), Expect = 9e-09
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 77 RREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEE 136
+ EE+ EE E + E+EEE+EEEEEEEEEEEEEEEEE V+ R + E
Sbjct: 732 KEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSE 791
Score = 53.9 bits (128), Expect = 4e-08
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 76 KRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEE 115
K EE+ E++ E + E+EEE+EEEEEEEEEEEEEEEE
Sbjct: 732 KEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771
Score = 52.4 bits (124), Expect = 1e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
+E+ EE+ EE+ E + E+EEE+EEEEEEEEEEEEEE
Sbjct: 732 KEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771
Score = 51.2 bits (121), Expect = 3e-07
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 8/58 (13%)
Query: 57 MAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEE 114
+A + + + EE+ EE EE+ EE E+EEE+EEEEEEEEEEEEEEE
Sbjct: 722 LAPVQPQANGKEEEEEEEEDEEEEEEDEE--------EEEEEEEEEEEEEEEEEEEEE 771
Score = 28.5 bits (62), Expect = 2.0
Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 15/92 (16%)
Query: 64 KSQRREEKRREEKRREEKRREEKR---------------REGKRREKEEEKEEEEEEEEE 108
+ EE+ EE+ EE+ EE+ R G E E + +E
Sbjct: 746 EEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGSERSTDRSQEGAP 805
Query: 109 EEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
++++E S+A + E E K L+
Sbjct: 806 STLLADDQKESRGRASMADGDLEPEEGSKTLV 837
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 62.8 bits (151), Expect = 9e-11
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 69 EEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEE-EEEEVSFSLAT 127
E+ EE+ EE+ +E +G+ + ++EEKEEE EEEEE+EEEEEEE +E F L++
Sbjct: 625 EDGFEEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSS 684
Query: 128 RERETETEEK 137
E ET+ E++
Sbjct: 685 EEIETKDEKE 694
Score = 44.7 bits (104), Expect = 3e-05
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 62 ARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
A+ + + +R EE+++ + + +G E+EEE+E +E EE+ EE+ E+EE+EE
Sbjct: 599 AKLQEAMKLRRFEERQKRQALFKLDNEDGFEEEEEEEEEMTDESEEDGEEKVEKEEKEEE 658
Query: 122 SFSLATRERETETE 135
+E E E E
Sbjct: 659 LEEEEEKEEEEEEE 672
Score = 43.9 bits (102), Expect = 5e-05
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 55 HSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEE 114
H+ G + + + ++ + +R EE+ +KR+ + + E+ EEEEEEEEE +E E
Sbjct: 587 HTKPGEKLQVLKAKLQEAMKLRRFEER---QKRQALFKLDNEDGFEEEEEEEEEMTDESE 643
Query: 115 EEEEEEVSFSLATRERETETEEKR 138
E+ EE+V +E E E EE++
Sbjct: 644 EDGEEKV--EKEEKEEELEEEEEK 665
Score = 40.4 bits (93), Expect = 5e-04
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 59 GTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
G S K + + + + + K R + R+ ++ + + E+ EEEEEEEEE +E E
Sbjct: 584 GASHTKPGEKLQVLKAKLQEAMKLRRFEERQKRQALFKLDNEDGFEEEEEEEEEMTDESE 643
Query: 119 EEVSFSLATRERETETEEK 137
E+ + E+E E EE+
Sbjct: 644 EDGEEKVEKEEKEEELEEE 662
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
KR+ L L N +EE + + + +E++ EE EE++ EE+ EG
Sbjct: 615 KRQALFKLDNEDGFEEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGN 674
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEE 118
+ E EE E ++E+E ++E +
Sbjct: 675 QETAEFLLSSEEIETKDEKEMDKENND 701
Score = 38.1 bits (87), Expect = 0.002
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 15/139 (10%)
Query: 11 SSASSPENDRILLSTFPYPHSKREN----------LAGLTNSTSSVKEEPPTLRHSMAGT 60
SS P + + L + +P K E L N S ++E HS +G
Sbjct: 968 SSMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFRLVSNDNEFDSDEDE-----HSDSGN 1022
Query: 61 SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
++ E +R EK + + R ++ E + E+E + EE +E EE+
Sbjct: 1023 DLALEDHEDDDEEELLKRSEKLKRQMRLRKYLEDEAEVSGSDVGSEDEYDGEEIDEYEED 1082
Query: 121 VSFSLATRERETETEEKRL 139
V + + E +++ K++
Sbjct: 1083 VIDEVLPSDEELQSQIKKI 1101
Score = 37.0 bits (84), Expect = 0.006
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 41 NSTSSVKEEPPTLRH-----SMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREK 95
NST + + +H AG + KS+RR EK E+R+ EK R+ K++E K +E
Sbjct: 140 NSTDFTTDRKSSKKHIHDKEGTAGKAKVKSKRRLEK---EERKMEKIRQLKKKETKNQED 196
Query: 96 EEEKE--------------EEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLIS 141
+ E+ E E+E E+EE E + ++ + ++ + +E L S
Sbjct: 197 DVEQPFNDSGCLLVDKDLFETGLEDENNSPLEDEESLESIRAAVKNKVKKHKKKEPSLES 256
Score = 27.3 bits (59), Expect = 4.4
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133
++ + EE+ E + R K R + E+ + ++ + EEEEE E+ F + ++ +
Sbjct: 1157 DDDQTEEQLDESEARWRKERIEREQWLRDMAQQGKITAEEEEEIGEDSQFMILAKKVTAK 1216
Query: 134 TEEKRLISP 142
+K P
Sbjct: 1217 ALQKNASRP 1225
Score = 26.2 bits (56), Expect = 9.7
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 93 REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
R+ ++++ EE+ +E E +E E E+ +A + + T EE+ +
Sbjct: 1154 RDSDDDQTEEQLDESEARWRKERIEREQWLRDMAQQGKITAEEEEEI 1200
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 62.4 bits (150), Expect = 1e-10
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK QRR E+ RE +R+ E++RE +R + R++E E+E E E E + E E + E+E E
Sbjct: 285 RKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERE-- 342
Query: 123 FSLATRERETETEEKR 138
R+R+TE + +R
Sbjct: 343 ---RKRKRQTEMDRER 355
Score = 60.8 bits (146), Expect = 4e-10
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 59 GTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
G R+ QR EK RE + E++R+ +R K RE+E+ ++E E E + E+E + E+
Sbjct: 145 GQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDR 204
Query: 119 EEVSFSLATRERETETEEKR 138
RERETETE +R
Sbjct: 205 HSERGRERERERETETETER 224
Score = 60.5 bits (145), Expect = 5e-10
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KE RHS G R+ +R E E KR+ ++ R+ +R+ + REK+ E+E E E
Sbjct: 197 KENKTEDRHSERGRE-RERERETETETERKRQTDRERDRQRKTEREREKQAERERASERE 255
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E ++E E E + + +ERE +T+ KR
Sbjct: 256 TERDKERERERDRDRDRDRRQKERERQTDRKR 287
Score = 57.4 bits (137), Expect = 4e-09
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R+ +R + R+ +RR E+ RE +R+ ++RE+E E+E + E E E E E E + E
Sbjct: 275 RQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETE 334
Query: 123 FSLATRERETETEEKR 138
R+RE E E KR
Sbjct: 335 -----RDREKERERKR 345
Score = 57.0 bits (136), Expect = 5e-09
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 31 SKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREG 90
++RE G T +E R A + RE +R+ E+ R+++R EK R+
Sbjct: 131 TEREGERGRDRQTDGQRERE---RQRDAEKERERQTDRERQRQTERNRQKEREREKNRQ- 186
Query: 91 KRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
+RRE+E ++E+E + E+ E E E E RE ETETE KR
Sbjct: 187 ERRERERQREKENKTEDRHSERGRERERE--------RETETETERKR 226
Score = 57.0 bits (136), Expect = 5e-09
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R+ QR+ E+ R+++R EK R+E+R ++REKE + E+ E E E E E E E
Sbjct: 165 RERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETER 224
Query: 123 FSLATRERETETEEKR 138
RER+ + + +R
Sbjct: 225 KRQTDRERDRQRKTER 240
Score = 55.1 bits (131), Expect = 2e-08
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 63 RKSQRREEKR---REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
++ +RR EKR RE R+ E+RRE+ R + R +E +++ E+E E + + E + + E+
Sbjct: 60 KERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREK 119
Query: 120 EVSFSLATRERETETEEKR 138
E + RERETE E +R
Sbjct: 120 ERNRQ-KERERETEREGER 137
Score = 53.1 bits (126), Expect = 7e-08
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 63 RKSQRREEKRREEKRRE--EKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
R+++R EK RE KR+ E RE R+ G+ ++ E+E E E E + + E EE E
Sbjct: 331 RETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERER 390
Query: 121 VSFSLATRERETETEEKR 138
+ERE +TE+ R
Sbjct: 391 DRDRDRQKERERQTEKDR 408
Score = 52.0 bits (123), Expect = 2e-07
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 54 RHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
R + +K + RE+ R+E + RE +R +E + E + E+ E+E E E E E E +
Sbjct: 167 RQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKR 226
Query: 114 EEEEEEEVSFSLATRERETETEEKR 138
+ + E + RERE + E +R
Sbjct: 227 QTDRERDRQ-RKTEREREKQAERER 250
Score = 51.6 bits (122), Expect = 2e-07
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 54 RHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE-EEEE 112
R+ G R+ RE +R E+ R+ R E+R + R++++E+E + E++ + + E
Sbjct: 355 RNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRET 414
Query: 113 EEEEEEEEVSFSLATRERETETEEKR 138
E++ E E+ S RER E E+++
Sbjct: 415 EKQREREKDRESERGRERGREREKQK 440
Score = 50.8 bits (120), Expect = 4e-07
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 63 RKSQRREEKRREEKR---REEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
RK +RR EK R KR RE +R EK RE ++ ++E +++ E+E ++E E E E E
Sbjct: 77 RKRERRREKDRHRKRDRHRERQRDREKERE-RQTDRERDRQREKERNRQKERERETEREG 135
Query: 120 EVSFSLAT-----RERETETEEKR 138
E T RER+ + E++R
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKER 159
Score = 50.8 bits (120), Expect = 4e-07
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
+RE N T E R T ++R+ R +++R+ +R EK+ E +
Sbjct: 190 ERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERE 249
Query: 92 R---REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATR--ERETETEEKR 138
R RE E +KE E E + + + + ++E E + R ER+ ETE KR
Sbjct: 250 RASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKR 301
Score = 50.8 bits (120), Expect = 4e-07
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 63 RKSQRREEKRREEKRREEKRREEKR---------------REGKRREKEEEKEEEEEEEE 107
R+ +R E++RE +R EK RE KR REG RR+ E E+E E E +
Sbjct: 321 RERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREG-RRQAERERERERERDR 379
Query: 108 EEEEEEEEEEEEEVSFSLATRERETETE 135
+ E EE E + RER+TE +
Sbjct: 380 QSAREREERERDRDRDRQKERERQTEKD 407
Score = 50.4 bits (119), Expect = 5e-07
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 60 TSARKSQRREEKRREEKRREEKRREEKRREGKR-REKEEEKEEEEEEEEEEEEEEEEEEE 118
T ++ ++RE +R E+ R+ +R E+ RE +R RE E ++E+E E + + + E + E
Sbjct: 297 TERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERN 356
Query: 119 EEVSFS---LATRERETETEEKR 138
+ A RERE E E R
Sbjct: 357 RQTGREGRRQAERERERERERDR 379
Score = 49.7 bits (117), Expect = 8e-07
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEE---EEEEEEEEEEEEEEEEE 119
R+ R +E+ R+ R +++RE++R K RE+E E+E E + + + + E E + + E
Sbjct: 97 RQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAE 156
Query: 120 EVSFSLATRERETETEEKR 138
+ RER+ +TE R
Sbjct: 157 KERERQTDRERQRQTERNR 175
Score = 49.7 bits (117), Expect = 8e-07
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 12/83 (14%)
Query: 61 SARKSQRREEKRREEKRREEKRREEKRREGKR-----REKEEEKEEEEEEEEEEEEEEEE 115
SAR+ + RE R ++++E +R+ EK R+G+R RE+E+++E E E E E+++
Sbjct: 381 SAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQK 440
Query: 116 EEEEEVSFSLATRERETETEEKR 138
E + RER+T+ + R
Sbjct: 441 GRERD-------RERQTDRQAGR 456
Score = 48.9 bits (115), Expect = 1e-06
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 61 SARKSQRREEKRREEKR---REEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEE 117
S R+++R +E+ RE R R+ +++E +R+ ++R++ E++ E E + E + E E E
Sbjct: 252 SERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERER 311
Query: 118 EEEVSFSLATRERETETEEKR 138
E R+RE E E +R
Sbjct: 312 ERN-------RKRERERERER 325
Score = 47.8 bits (112), Expect = 3e-06
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 63 RKSQRREEKRREEKRREEKRRE-EKRREGKR---------REKEEEKEEEEEEEEEEEEE 112
R++ R +++RE++R +K RE E REG+R RE+E +++ E+E E + + E
Sbjct: 107 RQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRE 166
Query: 113 EEEEEEEEVSFSLATRERETETEEKR 138
+ + E RERE +E+R
Sbjct: 167 RQRQTERN---RQKEREREKNRQERR 189
Score = 47.0 bits (110), Expect = 5e-06
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 54 RHSMAGTSARKSQRREEKRREEKRREEKRREEK-RREGKRREKEEEKEEEEEEEEEEEEE 112
RH + + RE++R + RE R+ EK R K RE+E E+E E + + + +
Sbjct: 87 RHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQ 146
Query: 113 EEEEEEEEVSFSLATRERETETEEKR 138
E E + + A +ERE +T+ +R
Sbjct: 147 RERERQRD-----AEKERERQTDRER 167
Score = 47.0 bits (110), Expect = 5e-06
Identities = 19/76 (25%), Positives = 41/76 (53%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK++R EK+ E +R E+ E + + R+++ +++ ++E E + + + + E
Sbjct: 236 RKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDR 295
Query: 123 FSLATRERETETEEKR 138
+ RER+ E E +R
Sbjct: 296 ETERKRERQRERERER 311
Score = 46.6 bits (109), Expect = 7e-06
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 54 RHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
RH K + R+ R +++RE++R +K RE + E+E E+ + + + + E E
Sbjct: 93 RHRERQRDREKERERQTDRERDRQREKERNRQKERE-RETEREGERGRDRQTDGQRERER 151
Query: 114 EEEEEEEVSFSLATRERETETEEKR 138
+ + E+E RER+T+ E +R
Sbjct: 152 QRDAEKE-------RERQTDRERQR 169
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 63 RKSQRREEKRREEKRREEKRRE-EKRRE---GKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
++ +R+ EK R+ +R EK+RE EK RE G+ R +E EK++ E + E + + + +
Sbjct: 398 KERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQ 457
Query: 119 EEVS 122
+ S
Sbjct: 458 RKRS 461
Score = 36.6 bits (83), Expect = 0.007
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 67 RREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLA 126
RR +E RR + K +G RE+ +KE E E+ + E E + + E
Sbjct: 28 RRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDR 87
Query: 127 TRERETETEEKR 138
R+R+ E +R
Sbjct: 88 HRKRDRHRERQR 99
Score = 34.7 bits (78), Expect = 0.027
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 61 SARKSQRREEKRREEKRREEKRRE-EKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
S R+ +E RR + K + + R +++E+E +E+ + E E + + E E++
Sbjct: 27 SRRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKD 86
Query: 120 EVSFSLATRERETETEEKR 138
RER+ + E++R
Sbjct: 87 RHRKRDRHRERQRDREKER 105
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 61.6 bits (148), Expect = 2e-10
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 28 YPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQ----RREEKRREEKRREEKRR 83
Y + KRE A +ST + P L + G A SQ RE REE EK
Sbjct: 967 YSYCKRE--AEERDSTEQEEAGPEILSNEHVGARASPSQGDSDERESLTREEDEDSEKEE 1024
Query: 84 EEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
EE+ +E + ++E+E E+ + +EEEEEEEEE EEEE E E E EE +
Sbjct: 1025 EEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEE-------VEEAENEGEEAK 1072
Score = 28.9 bits (63), Expect = 1.5
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 54 RHSMAGT-SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEE 112
R S +G+ S + R +RE + R+ +EE E E + + + +E E
Sbjct: 952 RFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEILSNEHVGARASPSQGDSDERES 1011
Query: 113 --EEEEEEEEVSFSLATRERETETEEKRLISP 142
EE+E+ E +E E EEK P
Sbjct: 1012 LTREEDEDSEKEEEEEDKEMEELQEEKECEKP 1043
Score = 27.7 bits (60), Expect = 3.3
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
+RE+L + S +EE M K + + EE+ EE+ EE
Sbjct: 1008 ERESLTREEDEDSEKEEEEED--KEMEELQEEKECEKPQGDEEEEEEEEEVEEE------ 1059
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E EE + E EE + E +++ E + S E + E++
Sbjct: 1060 --EVEEAENEGEEAKTEGLMKDDRAESQASSLGQKVGESSEQVSEEK 1104
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 61.6 bits (148), Expect = 2e-10
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 28 YPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQ----RREEKRREEKRREEKRR 83
Y + KRE A +ST + P L + G A SQ RE REE EK
Sbjct: 983 YSYCKRE--AEERDSTEQEEAGPEILSNEHVGARASPSQGDSDERESLTREEDEDSEKEE 1040
Query: 84 EEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
EE+ +E + ++E+E E+ + +EEEEEEEEE EEEE E E E EE +
Sbjct: 1041 EEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEE-------VEEAENEGEEAK 1088
Score = 28.9 bits (63), Expect = 1.5
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 54 RHSMAGT-SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEE 112
R S +G+ S + R +RE + R+ +EE E E + + + +E E
Sbjct: 968 RFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEILSNEHVGARASPSQGDSDERES 1027
Query: 113 --EEEEEEEEVSFSLATRERETETEEKRLISP 142
EE+E+ E +E E EEK P
Sbjct: 1028 LTREEDEDSEKEEEEEDKEMEELQEEKECEKP 1059
Score = 27.7 bits (60), Expect = 3.3
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
+RE+L + S +EE M K + + EE+ EE+ EE
Sbjct: 1024 ERESLTREEDEDSEKEEEEED--KEMEELQEEKECEKPQGDEEEEEEEEEVEEE------ 1075
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E EE + E EE + E +++ E + S E + E++
Sbjct: 1076 --EVEEAENEGEEAKTEGLMKDDRAESQASSLGQKVGESSEQVSEEK 1120
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 61.2 bits (147), Expect = 3e-10
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 12 SASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTL--RHSMAGTSARKSQRRE 69
SA+ PE + L T S NL GLT SSV + P T +A + + S+ ++
Sbjct: 383 SAAGPEQPQAGLLT----PSTLLNLGGLT---SSVLKTPITSVPLGPLASSPTKSSEGKD 435
Query: 70 EKRREEKRREEKRRE---EKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLA 126
E +++E + EK + +EEE+EEE EEEEEEEEEEEEEEE+E L
Sbjct: 436 SGAAEGEKQEVGDGDCFSEKVEPAEEEAEEEEEEEEAEEEEEEEEEEEEEEEDEGCKGLF 495
Query: 127 TRERETETEEK 137
E + E E++
Sbjct: 496 PSELDEELEDR 506
Score = 29.6 bits (65), Expect = 0.88
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 58 AGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEE 110
A A + + EE EE+ EE+ EE+ EG + E +EE E+ EE
Sbjct: 459 AEEEAEEEEEEEEAEEEEEEEEEE-EEEEEDEGCKGLFPSELDEELEDRPHEE 510
Score = 29.3 bits (64), Expect = 1.1
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 26 FPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREE 85
FPY + + L GL S S+ ++ + S+ ++ QR+ ++++++K ++++ +
Sbjct: 3342 FPYSPALSQALMGL--SPGSLLQQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKAS 3399
Query: 86 KRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEK 137
+ +++ +E + EE++ EVS L E E E K
Sbjct: 3400 QTPV----PPGAPSPDKDPAKESPKPEEQKNTPREVSPLLPKLPEEPEAESK 3447
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 61.2 bits (147), Expect = 3e-10
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 40 TNSTSSVKEEPPTLRHSM---AGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKE 96
+ S+ S KEE + + G+S ++ EE+ EE E++ E E E
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 97 EEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133
E E+ EEEEEEEEEEEEEEEEEE + R+++ E
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 53.5 bits (127), Expect = 6e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133
EE + + EE +G+ E+EEE+EEEEEEEEEEE E++E +++E TR ++
Sbjct: 213 EEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Query: 134 T 134
+
Sbjct: 273 S 273
Score = 49.3 bits (116), Expect = 1e-06
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 69 EEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATR 128
EE E+ EE ++ E + E+EEE+EEEEEEEEE E++E +++EE + +
Sbjct: 210 EEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSE 269
Query: 129 ERETETE 135
++ +E
Sbjct: 270 ASDSGSE 276
Score = 46.2 bits (108), Expect = 9e-06
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 63 RKSQRREEKRREEKRREEKRREEKR-------REGKRREKEEEKEEEEEEEEEEEEEEEE 115
R++ R + +EE EE + + +G E EEE EE+ EE+EE EE+ E
Sbjct: 161 RRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAE 220
Query: 116 EEEEEVSFSLATRERETETEEK 137
E+EE E E E EE+
Sbjct: 221 EDEEVDEDGEEEEEEEEEEEEE 242
Score = 40.0 bits (92), Expect = 7e-04
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 62 ARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
A + + +E EE+ EE+ EE+ E + E++E ++EE + + E + E V
Sbjct: 219 AEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESV 278
Query: 122 SF----------SLATRERETETEEKRLISP 142
SF + + E++ E + R ISP
Sbjct: 279 SFTDGSVRSGSGTDGSDEKKKERKRARGISP 309
Score = 38.9 bits (89), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 53 LRHSMAGTSARKSQRREEKR-REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEE 109
LR + A S R+S+ RE R RE R + RR+ +R G+ RE+E E+ + + + E
Sbjct: 646 LRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERERLCDRDRDRGE 703
Score = 30.0 bits (66), Expect = 0.67
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
Query: 6 HSRGFSS---ASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSA 62
HSR S +SS N++ ++ST ++ +N + + + +R S + S
Sbjct: 65 HSRQLVSKPLSSSVSNNKRIVSTKGKSATEYKNEEYQRSERNKRLDADRKIRLS-SSASR 123
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRR-----EKEEEKEEEEEEEEEEEEEEEEEE 117
+ + EK KR E+R + +G R ++ + + +EE EE +
Sbjct: 124 EPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDH 183
Query: 118 EEEVSFSLATRERETETEEK 137
E S S + TE EE+
Sbjct: 184 ETGSSGSSDEQGNNTENEEE 203
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/67 (28%), Positives = 25/67 (37%)
Query: 70 EKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRE 129
E R R + +EE E + E +E+ E EEE EE+V E
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 130 RETETEE 136
E EE
Sbjct: 218 DAEEDEE 224
Score = 28.1 bits (61), Expect = 2.6
Identities = 25/121 (20%), Positives = 37/121 (30%), Gaps = 14/121 (11%)
Query: 31 SKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREG 90
+ RE T K +P S + + ++R + K G
Sbjct: 121 ASREPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYG 180
Query: 91 KRREKEEEKEEEEEEEEEEEEEE--------------EEEEEEEVSFSLATRERETETEE 136
E +E+ E EEE + EE+EEV E E E EE
Sbjct: 181 SDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEE 240
Query: 137 K 137
+
Sbjct: 241 E 241
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 61.2 bits (147), Expect = 3e-10
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 40 TNSTSSVKEEPPTLRHSM---AGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKE 96
+ S+ S KEE + + G+S ++ EE+ EE E++ E E E
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 97 EEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133
E E+ EEEEEEEEEEEEEEEEEE + R+++ E
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 53.5 bits (127), Expect = 6e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133
EE + + EE +G+ E+EEE+EEEEEEEEEEE E++E +++E TR ++
Sbjct: 213 EEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Query: 134 T 134
+
Sbjct: 273 S 273
Score = 49.3 bits (116), Expect = 1e-06
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 69 EEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATR 128
EE E+ EE ++ E + E+EEE+EEEEEEEEE E++E +++EE + +
Sbjct: 210 EEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSE 269
Query: 129 ERETETE 135
++ +E
Sbjct: 270 ASDSGSE 276
Score = 46.2 bits (108), Expect = 9e-06
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 63 RKSQRREEKRREEKRREEKRREEKR-------REGKRREKEEEKEEEEEEEEEEEEEEEE 115
R++ R + +EE EE + + +G E EEE EE+ EE+EE EE+ E
Sbjct: 161 RRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAE 220
Query: 116 EEEEEVSFSLATRERETETEEK 137
E+EE E E E EE+
Sbjct: 221 EDEEVDEDGEEEEEEEEEEEEE 242
Score = 40.0 bits (92), Expect = 7e-04
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 62 ARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
A + + +E EE+ EE+ EE+ E + E++E ++EE + + E + E V
Sbjct: 219 AEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESV 278
Query: 122 SF----------SLATRERETETEEKRLISP 142
SF + + E++ E + R ISP
Sbjct: 279 SFTDGSVRSGSGTDGSDEKKKERKRARGISP 309
Score = 38.9 bits (89), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 53 LRHSMAGTSARKSQRREEKR-REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEE 109
LR + A S R+S+ RE R RE R + RR+ +R G+ RE+E E+ + + + E
Sbjct: 664 LRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERERLCDRDRDRGE 721
Score = 30.0 bits (66), Expect = 0.67
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
Query: 6 HSRGFSS---ASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSA 62
HSR S +SS N++ ++ST ++ +N + + + +R S + S
Sbjct: 65 HSRQLVSKPLSSSVSNNKRIVSTKGKSATEYKNEEYQRSERNKRLDADRKIRLS-SSASR 123
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRR-----EKEEEKEEEEEEEEEEEEEEEEEE 117
+ + EK KR E+R + +G R ++ + + +EE EE +
Sbjct: 124 EPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDH 183
Query: 118 EEEVSFSLATRERETETEEK 137
E S S + TE EE+
Sbjct: 184 ETGSSGSSDEQGNNTENEEE 203
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/67 (28%), Positives = 25/67 (37%)
Query: 70 EKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRE 129
E R R + +EE E + E +E+ E EEE EE+V E
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 130 RETETEE 136
E EE
Sbjct: 218 DAEEDEE 224
Score = 28.1 bits (61), Expect = 2.6
Identities = 25/121 (20%), Positives = 37/121 (30%), Gaps = 14/121 (11%)
Query: 31 SKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREG 90
+ RE T K +P S + + ++R + K G
Sbjct: 121 ASREPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYG 180
Query: 91 KRREKEEEKEEEEEEEEEEEEEE--------------EEEEEEEVSFSLATRERETETEE 136
E +E+ E EEE + EE+EEV E E E EE
Sbjct: 181 SDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEE 240
Query: 137 K 137
+
Sbjct: 241 E 241
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 60.8 bits (146), Expect = 4e-10
Identities = 26/84 (30%), Positives = 50/84 (59%)
Query: 55 HSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEE 114
H + R+S+R++E+R EKR+ E+ +E KR GK+ +K+ +K E +E E + +E E
Sbjct: 24 HISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKERE 83
Query: 115 EEEEEEVSFSLATRERETETEEKR 138
++ +E R++E + E++
Sbjct: 84 KQRKERREKERRKRKKEKKKRERK 107
Score = 58.9 bits (141), Expect = 1e-09
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
KRE KE R + ++ +RR++KRR+E++RE++R + +R+ K
Sbjct: 103 KRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKK 162
Query: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
R+++E EK+ E +E ++E E +E E R ++ E ++ R
Sbjct: 163 RKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDR 209
Score = 56.2 bits (134), Expect = 9e-09
Identities = 28/92 (30%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KE+ R +K + R+E+ RE K+R E++R+ KRR+ KRR++ + ++E + E
Sbjct: 99 KEKKKRERKQRGRRERKKKKERKERERENKQRRERKRK-KRRKKKRRKERKREKERGKRE 157
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
+ ++ ++EE E++ + R++E E +E+R
Sbjct: 158 RKRKKRKKEEREKKRERNRKERKKERERKERR 189
Score = 55.8 bits (133), Expect = 1e-08
Identities = 25/90 (27%), Positives = 52/90 (57%)
Query: 49 EPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE 108
+P T R S R+ ++R+ +R +E++RE ++E+K+R+ + R KE E++ +E E++
Sbjct: 27 KPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQR 86
Query: 109 EEEEEEEEEEEEVSFSLATRERETETEEKR 138
+E E+E + + R++ E K+
Sbjct: 87 KERREKERRKRKKEKKKRERKQRGRRERKK 116
Score = 54.7 bits (130), Expect = 3e-08
Identities = 24/75 (32%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R+ +R+ E+ ++EK++ +KR K RE KR+E+E++++E E+E + ++E+++ E +
Sbjct: 50 REKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERK-- 107
Query: 123 FSLATRERETETEEK 137
RER+ + E K
Sbjct: 108 -QRGRRERKKKKERK 121
Score = 53.5 bits (127), Expect = 6e-08
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK + ++ K R EK R ++++E+K+RE K+R + E K+++E +E E E ++ E + +
Sbjct: 79 RKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRK-- 136
Query: 123 FSLATRERETETEEKR 138
R+++ E KR
Sbjct: 137 ---KRRKKKRRKERKR 149
Score = 52.8 bits (125), Expect = 1e-07
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREE--KRREEKRRE-EKRREEKRREGKRREKEEEKEEEE 103
K E R G +K +++ E K RE KR+E EK+R+E+R + +R+ K+E+K+ E
Sbjct: 47 KREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRER 106
Query: 104 EEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
++ E ++++E +E + RER+ + K+
Sbjct: 107 KQRGRRERKKKKERKERERENKQRRERKRKKRRKK 141
Score = 52.4 bits (124), Expect = 1e-07
Identities = 24/78 (30%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 63 RKSQRRE--EKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
R+ QR+E EK R ++++E+K+RE K+R + R+K++E++E E E ++ E + ++ ++
Sbjct: 82 REKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKK 141
Query: 121 VSFSLATRERETETEEKR 138
RE+E E++
Sbjct: 142 KRRKERKREKERGKRERK 159
Score = 52.4 bits (124), Expect = 1e-07
Identities = 22/76 (28%), Positives = 46/76 (60%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R+ ++R ++R+ EK R ++ R+ K+R+ + REK+ E+ +E ++E E +E E ++E
Sbjct: 138 RRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKK 197
Query: 123 FSLATRERETETEEKR 138
+ER+ + + R
Sbjct: 198 ERRKKKERKKDRKTDR 213
Score = 52.4 bits (124), Expect = 1e-07
Identities = 21/75 (28%), Positives = 48/75 (64%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
RK ++RE++R + +R+ +KR++E+R + + R ++E K+E E +E E ++E ++E +
Sbjct: 144 RKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKK 203
Query: 123 FSLATRERETETEEK 137
R+ + +T+ +
Sbjct: 204 ERKKDRKTDRQTDSQ 218
Score = 48.1 bits (113), Expect = 2e-06
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 63 RKSQRREEKRREEK---RREEKR---REEKRREGK-RREKEEEKEEEEEEEEEEEEEEEE 115
R+ +++E+K+RE K RRE K+ R+E+ RE K RRE++ +K +++ +E + E+E
Sbjct: 94 RRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKER 153
Query: 116 EEEEEVSFSLATRERETETEEKR 138
+ E ERE + E R
Sbjct: 154 GKRERKRKKRKKEEREKKRERNR 176
Score = 48.1 bits (113), Expect = 2e-06
Identities = 22/75 (29%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 54 RHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
R G RK ++R+++ RE+KR E+ R+E+++E +R+E+ E K+E ++E +++E +
Sbjct: 149 REKERGKRERKRKKRKKEEREKKR--ERNRKERKKERERKERRERKKERKKERRKKKERK 206
Query: 114 EEEEEEEVSFSLATR 128
++ + + + S R
Sbjct: 207 KDRKTDRQTDSQVFR 221
Score = 33.5 bits (75), Expect = 0.061
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
KRE G +++ + RK +R ++RRE K+ +K R +K+ K
Sbjct: 148 KREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKK 207
Query: 92 RREKEEEKEEE 102
R+ + + + +
Sbjct: 208 DRKTDRQTDSQ 218
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 60.8 bits (146), Expect = 4e-10
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 79 EEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRER---ETETE 135
EE+ EE+ E + EKEEEKEE+EEEEE+EEE+EE+EEEEE E+ E +TE
Sbjct: 119 EEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTE 178
Query: 136 EKR 138
+R
Sbjct: 179 IQR 181
Score = 57.8 bits (138), Expect = 3e-09
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
+ E + EE+ EE++ EEK + + EKEEEKEE+EEEEE+E ++ EEE+ EE
Sbjct: 119 EEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEE 173
Score = 55.5 bits (132), Expect = 1e-08
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 70 EKRREEKRREEKRREEKRREGKRREKEEEKEEE-EEEEEEEEEEEEEEEEEEVSFSLATR 128
E+ E+ EE EEK E + E+EEEKEEE EE+EEEEE+E ++ EEE+V + T
Sbjct: 119 EEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTE 178
Query: 129 ERETE 133
+ T+
Sbjct: 179 IQRTQ 183
Score = 53.9 bits (128), Expect = 4e-08
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133
EE+ EE+ E + E + ++E+E+EEE+EEE+EE+EEEEE+E +++ E +TE
Sbjct: 119 EEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTE 178
Query: 134 TEEKRLI 140
+ + +
Sbjct: 179 IQRTQYL 185
Score = 46.6 bits (109), Expect = 7e-06
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 69 EEKRREEKRREEKRREEKRREGKRREKEE--EKEEEEEEEEEEEEEEEEEEEE 119
EE+ EE+ +EE++ E++ E K EKEE E+EE+E ++ EEE+ EEE + E
Sbjct: 126 EEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTE 178
Score = 44.7 bits (104), Expect = 3e-05
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 69 EEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
EE+ +EE++ E++ EEK E K ++EEE++E ++ EEE+ EEE + E + +
Sbjct: 131 EEEEKEEEKEEDEEEEEKEEE-KEEDEEEEEKEGKKMEEEKVEEEIDTEIQRTQY 184
Score = 43.9 bits (102), Expect = 5e-05
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 37 AGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKE 96
A L S ++ P + + +E+ +EE EE++ EEK + + EKE
Sbjct: 103 AALVAEECSAQQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKE 162
Query: 97 EEKEEEEEEEEEEEEE 112
+K EEE+ EEE + E
Sbjct: 163 GKKMEEEKVEEEIDTE 178
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 60.5 bits (145), Expect = 5e-10
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 7 SRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQ 66
SR + + S + DR + PH KR S S + ++ +
Sbjct: 335 SRSHNRSRSRQKDRRRSKS---PHKKRSKSRERRKSRSRSHSRD---KRKDTREKIKEKE 388
Query: 67 RREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLA 126
R +EK RE++R EK RE+++ GK +++++E+E++ E+++E++ E E E+E E
Sbjct: 389 RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHE-----K 443
Query: 127 TRERETETEEKR 138
R++E E E+ +
Sbjct: 444 DRDKEKEKEQDK 455
Score = 53.1 bits (126), Expect = 7e-08
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 6 HSRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKS 65
H+R S +SS + R S H R + + + + P + S + RKS
Sbjct: 311 HTRSKSRSSSKSHSRRKRSQSK--HRSRSHNRSRSRQKDRRRSKSPHKKRSKS-RERRKS 367
Query: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEE-EEEEE----EEEEEEEEEEEEE 120
+ R R + K EK +E++R + K REKE E+E+E E+E+E ++ ++E E++ E+
Sbjct: 368 RSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK 427
Query: 121 VSFSLATRERETETEEKR 138
RERE E E+ R
Sbjct: 428 DKEKDREREREKEHEKDR 445
Score = 51.2 bits (121), Expect = 3e-07
Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 59 GTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
G + + + RE+ R ++K ++ +R EK E K R+KE+EKE+++E+E E++ +E +E+
Sbjct: 412 GKNKDRDKEREKDREKDKEKDREREREKEHE-KDRDKEKEKEQDKEKEREKDRSKEIDEK 470
Query: 119 EEV---------SFSLATRERETETEEKR 138
+ S++ + R R + E +R
Sbjct: 471 RKKDKKSRTPPRSYNASRRSRSSSRERRR 499
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/112 (22%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 31 SKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREG 90
S RE + S+S T++ + + + +S+ +++K+RE++R R E+ R
Sbjct: 493 SSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERST 552
Query: 91 KRREKEEEKEEEEEEEEEEE--EEEEEEEEEEVSFSLATRERET-ETEEKRL 139
R+ +++ +E+ E+ +E+E +E + S S +++ TEE ++
Sbjct: 553 SMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKI 604
Score = 36.2 bits (82), Expect = 0.009
Identities = 18/91 (19%), Positives = 39/91 (42%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
K P ++ + S S+ R +R R + + +R+ R + +++++
Sbjct: 476 KSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKR 535
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEK 137
E+E + E E E S S+ + + +EK
Sbjct: 536 EKERDHISERRERERSTSMRKSSNDRDGKEK 566
Score = 30.0 bits (66), Expect = 0.67
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 61 SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
++R+S+ +RR + R R + KR+ +++++ E+E + E
Sbjct: 486 ASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER 545
Query: 121 VSFSLATRERETETEEKR 138
RERE T ++
Sbjct: 546 -------RERERSTSMRK 556
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 60.5 bits (145), Expect = 5e-10
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 7 SRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQ 66
SR + + S + DR + PH KR S S + ++ +
Sbjct: 219 SRSHNRSRSRQKDRRRSKS---PHKKRSKSRERRKSRSRSHSRD---KRKDTREKIKEKE 272
Query: 67 RREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLA 126
R +EK RE++R EK RE+++ GK +++++E+E++ E+++E++ E E E+E E
Sbjct: 273 RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHE-----K 327
Query: 127 TRERETETEEKR 138
R++E E E+ +
Sbjct: 328 DRDKEKEKEQDK 339
Score = 53.1 bits (126), Expect = 7e-08
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 6 HSRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKS 65
H+R S +SS + R S H R + + + + P + S + RKS
Sbjct: 195 HTRSKSRSSSKSHSRRKRSQSK--HRSRSHNRSRSRQKDRRRSKSPHKKRSKS-RERRKS 251
Query: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEE-EEEEE----EEEEEEEEEEEEE 120
+ R R + K EK +E++R + K REKE E+E+E E+E+E ++ ++E E++ E+
Sbjct: 252 RSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREK 311
Query: 121 VSFSLATRERETETEEKR 138
RERE E E+ R
Sbjct: 312 DKEKDREREREKEHEKDR 329
Score = 51.2 bits (121), Expect = 3e-07
Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 59 GTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
G + + + RE+ R ++K ++ +R EK E K R+KE+EKE+++E+E E++ +E +E+
Sbjct: 296 GKNKDRDKEREKDREKDKEKDREREREKEHE-KDRDKEKEKEQDKEKEREKDRSKEIDEK 354
Query: 119 EEV---------SFSLATRERETETEEKR 138
+ S++ + R R + E +R
Sbjct: 355 RKKDKKSRTPPRSYNASRRSRSSSRERRR 383
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/112 (22%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 31 SKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREG 90
S RE + S+S T++ + + + +S+ +++K+RE++R R E+ R
Sbjct: 377 SSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERST 436
Query: 91 KRREKEEEKEEEEEEEEEEE--EEEEEEEEEEVSFSLATRERET-ETEEKRL 139
R+ +++ +E+ E+ +E+E +E + S S +++ TEE ++
Sbjct: 437 SMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKI 488
Score = 36.2 bits (82), Expect = 0.009
Identities = 18/91 (19%), Positives = 39/91 (42%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
K P ++ + S S+ R +R R + + +R+ R + +++++
Sbjct: 360 KSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKR 419
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEK 137
E+E + E E E S S+ + + +EK
Sbjct: 420 EKERDHISERRERERSTSMRKSSNDRDGKEK 450
Score = 30.0 bits (66), Expect = 0.67
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 61 SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
++R+S+ +RR + R R + KR+ +++++ E+E + E
Sbjct: 370 ASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER 429
Query: 121 VSFSLATRERETETEEKR 138
RERE T ++
Sbjct: 430 -------RERERSTSMRK 440
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 60.1 bits (144), Expect = 6e-10
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRR--EEKRREEKRREEKRREGKRREKEEE----- 98
++E+ R +A R Q++E++RR E++RRE + R ++ RE +RRE+EE+
Sbjct: 381 LREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEE 440
Query: 99 -----KEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
KEEEE EEE+ E E+E + L +R E +++L+
Sbjct: 441 LERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLL 487
Score = 47.0 bits (110), Expect = 5e-06
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 52 TLRHSMAGTSARKSQRREEKRREEKRREEKRRE----------------EKRREGKRREK 95
TLR +R E RR++ +E++ RE E+++E +RR +
Sbjct: 351 TLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLE 410
Query: 96 EEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+++ E E ++E E+ E+EE+ R R+ E E +R
Sbjct: 411 EQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRR 453
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KE LR ++ Q RE++ + + E+++ ++++ +RR EE++ E E
Sbjct: 364 KERSEALRRQQL---LQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR 420
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
++E E+ E+EE R E EE+R
Sbjct: 421 RQQEREQRRREQEEKRRLEELERRRKEEEERR 452
Score = 40.4 bits (93), Expect = 5e-04
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 49 EPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEE------- 101
EP ++ + ++ R+ R ++ +E R E RR++ +E + RE+EE K +
Sbjct: 339 EPSSIVNVPGESTLRRDFLRLQQENKE-RSEALRRQQLLQEQQLREQEEYKRQLLAERQK 397
Query: 102 --EEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+++E+ EE++ E E +R E EEKR
Sbjct: 398 RIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKR 436
Score = 34.3 bits (77), Expect = 0.036
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 73 REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
R++ + R + K + R+K EK+E E E EEEEEE E+E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQE 337
Score = 32.3 bits (72), Expect = 0.14
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
R++ + R + K ++ R+ KR EK+E + E EEEEEE E+E E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRK-KRGEKDETEYEYSGSEEEEEEVPEQEGE 339
Score = 30.0 bits (66), Expect = 0.67
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
+ Q E + R + + R +KR E E E EEEEEE E+E E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGE 339
Score = 28.1 bits (61), Expect = 2.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 53 LRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE 108
L+H + Q R + + R +KR E+ E + EEE+EE E+E E
Sbjct: 284 LKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGE 339
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 60.1 bits (144), Expect = 6e-10
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRR--EEKRREEKRREEKRREGKRREKEEE----- 98
++E+ R +A R Q++E++RR E++RRE + R ++ RE +RRE+EE+
Sbjct: 381 LREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEE 440
Query: 99 -----KEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
KEEEE EEE+ E E+E + L +R E +++L+
Sbjct: 441 LERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLL 487
Score = 47.0 bits (110), Expect = 5e-06
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 52 TLRHSMAGTSARKSQRREEKRREEKRREEKRRE----------------EKRREGKRREK 95
TLR +R E RR++ +E++ RE E+++E +RR +
Sbjct: 351 TLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLE 410
Query: 96 EEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+++ E E ++E E+ E+EE+ R R+ E E +R
Sbjct: 411 EQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRR 453
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KE LR ++ Q RE++ + + E+++ ++++ +RR EE++ E E
Sbjct: 364 KERSEALRRQQL---LQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR 420
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
++E E+ E+EE R E EE+R
Sbjct: 421 RQQEREQRRREQEEKRRLEELERRRKEEEERR 452
Score = 40.4 bits (93), Expect = 5e-04
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 49 EPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEE------- 101
EP ++ + ++ R+ R ++ +E R E RR++ +E + RE+EE K +
Sbjct: 339 EPSSIVNVPGESTLRRDFLRLQQENKE-RSEALRRQQLLQEQQLREQEEYKRQLLAERQK 397
Query: 102 --EEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+++E+ EE++ E E +R E EEKR
Sbjct: 398 RIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKR 436
Score = 34.3 bits (77), Expect = 0.036
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 73 REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
R++ + R + K + R+K EK+E E E EEEEEE E+E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQE 337
Score = 32.3 bits (72), Expect = 0.14
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
R++ + R + K ++ R+ KR EK+E + E EEEEEE E+E E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRK-KRGEKDETEYEYSGSEEEEEEVPEQEGE 339
Score = 30.0 bits (66), Expect = 0.67
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
+ Q E + R + + R +KR E E E EEEEEE E+E E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGE 339
Score = 28.1 bits (61), Expect = 2.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 53 LRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE 108
L+H + Q R + + R +KR E+ E + EEE+EE E+E E
Sbjct: 284 LKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGE 339
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 60.1 bits (144), Expect = 6e-10
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRR--EEKRREEKRREEKRREGKRREKEEE----- 98
++E+ R +A R Q++E++RR E++RRE + R ++ RE +RRE+EE+
Sbjct: 381 LREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEE 440
Query: 99 -----KEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
KEEEE EEE+ E E+E + L +R E +++L+
Sbjct: 441 LERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLL 487
Score = 47.0 bits (110), Expect = 5e-06
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 52 TLRHSMAGTSARKSQRREEKRREEKRREEKRRE----------------EKRREGKRREK 95
TLR +R E RR++ +E++ RE E+++E +RR +
Sbjct: 351 TLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLE 410
Query: 96 EEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+++ E E ++E E+ E+EE+ R R+ E E +R
Sbjct: 411 EQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRR 453
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
KE LR ++ Q RE++ + + E+++ ++++ +RR EE++ E E
Sbjct: 364 KERSEALRRQQL---LQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR 420
Query: 107 EEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
++E E+ E+EE R E EE+R
Sbjct: 421 RQQEREQRRREQEEKRRLEELERRRKEEEERR 452
Score = 40.4 bits (93), Expect = 5e-04
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 49 EPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEE------- 101
EP ++ + ++ R+ R ++ +E R E RR++ +E + RE+EE K +
Sbjct: 339 EPSSIVNVPGESTLRRDFLRLQQENKE-RSEALRRQQLLQEQQLREQEEYKRQLLAERQK 397
Query: 102 --EEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+++E+ EE++ E E +R E EEKR
Sbjct: 398 RIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKR 436
Score = 34.3 bits (77), Expect = 0.036
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 73 REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
R++ + R + K + R+K EK+E E E EEEEEE E+E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQE 337
Score = 33.5 bits (75), Expect = 0.061
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 63 RKSQRREEKRR--EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
R+ + EE+RR EEKRR E+ +E RR+ + ++ E +++ +E+ E E E
Sbjct: 443 RRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLLQEQAMLLECRWREME 502
Query: 121 VSFSLATRERETETEEKRLIS 141
+R+ + E+ L+S
Sbjct: 503 EHRQAERLQRQLQQEQAYLLS 523
Score = 32.3 bits (72), Expect = 0.14
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
R++ + R + K ++ R+ KR EK+E + E EEEEEE E+E E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRK-KRGEKDETEYEYSGSEEEEEEVPEQEGE 339
Score = 30.0 bits (66), Expect = 0.67
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
+ Q E + R + + R +KR E E E EEEEEE E+E E
Sbjct: 290 RDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGE 339
Score = 28.1 bits (61), Expect = 2.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 53 LRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE 108
L+H + Q R + + R +KR E+ E + EEE+EE E+E E
Sbjct: 284 LKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGE 339
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 60.1 bits (144), Expect = 6e-10
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 6 HSRGFSSASSPENDRILL---------STFPYPHSKRENLAGLTNSTSSVKEEPPTLRHS 56
H + +S PE DR S+F H +R+ N + P +RH
Sbjct: 593 HDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRR---DNRERDQRPSSP-IRHQ 648
Query: 57 MAGTSARKSQRREEKR--REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEE 114
+ +RREE+R R + RR+E+ RE R + RE+E E+E E + E E+E E E
Sbjct: 649 GRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELE 708
Query: 115 EEEEEEVSFSLATRERETETEEKR 138
E E RERE E + +R
Sbjct: 709 RERARE-----REREREKERDRER 727
Score = 60.1 bits (144), Expect = 6e-10
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 62 ARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
AR+ +R EK R+ +R ++ + +R + R++E+E+E E EE E E E E E E E
Sbjct: 712 AREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERERERE 771
Query: 122 SFSLATRERETETEEKR 138
RER+ E E +R
Sbjct: 772 RERERARERDKERERQR 788
Score = 57.4 bits (137), Expect = 4e-09
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEE--------EEEEEEEEE 114
R +R E+ RE R EK RE +R + RE+E EKE + E E E E E +
Sbjct: 685 RDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERD 744
Query: 115 EEEEEEVSFSLATRERETETEEKR 138
E+E E RERE E E +R
Sbjct: 745 REKEREREREERERERERERERER 768
Score = 57.4 bits (137), Expect = 4e-09
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 63 RKSQRREEKRRE---EKRREEKRREEKRREGKR-REKEEEKEEEEEEEEEEEEEEEEEEE 118
R+ R EK RE E+ RE +R EK R+ +R R+++ ++E E E E + E+E E E E
Sbjct: 695 RERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERERE 754
Query: 119 EEVSFSLATRERETETEEKR 138
E RERE E E +R
Sbjct: 755 ERERERERERERERERERER 774
Score = 55.8 bits (133), Expect = 1e-08
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE---EEEEEEEEEEEEE 119
R RR+E+ RE R E+ RE +R + R++E EKE E E E E E E E+E + E
Sbjct: 667 RVDDRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRE 726
Query: 120 EVSFSLATRERETETEEKR 138
RERE E E R
Sbjct: 727 RDRDRDHDRERERERERDR 745
Score = 55.1 bits (131), Expect = 2e-08
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEE---EEEEEEEEEEEEEEEEE 119
R+ +R E+ RE +R E+ RE +R + REKE E E E E E E E+E + E + +
Sbjct: 671 RRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRD 730
Query: 120 EVSFSLATRERETETEEKR 138
RERE + E++R
Sbjct: 731 RDHDRERERERERDREKER 749
Score = 55.1 bits (131), Expect = 2e-08
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
+ + R+ R E+ RE R +E+ RE + RE+E E+E E E E E E E E ++E
Sbjct: 727 RDRDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDKE--- 783
Query: 124 SLATRERETETEEK 137
RER+ + E+K
Sbjct: 784 ----RERQRDWEDK 793
Score = 52.8 bits (125), Expect = 1e-07
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKR---REKEEEKEEEEEEE--------EEEEEE 112
+ + R+ +R E+ RE R EK RE +R RE+E E+E+E + E E E E
Sbjct: 681 RERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERE 740
Query: 113 EEEEEEEEVSFSLATRERETETEEKR 138
E + E+E RERE E E +R
Sbjct: 741 RERDREKEREREREERERERERERER 766
Score = 51.6 bits (122), Expect = 2e-07
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R R E+ RE R +E+ RE + RE + RE+E E+E E E E E E ++E E +
Sbjct: 731 RDHDRERERERERDREKEREREREERE-RERERERERERERERERERARERDKERERQRD 789
Query: 123 FSLATRERETETEEKRLI 140
+ + R+ E++ I
Sbjct: 790 WEDKDKGRDDRREKREEI 807
Score = 51.6 bits (122), Expect = 2e-07
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 64 KSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
+ + RE R +E+ RE + RE +R + RE+E E+E E E ++E E + + E++
Sbjct: 737 RERERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWEDKDKG 796
Query: 124 SLATRERETETEEKR 138
RE+ E E R
Sbjct: 797 RDDRREKREEIREDR 811
Score = 38.9 bits (89), Expect = 0.001
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 21/123 (17%)
Query: 13 ASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLR--------HSMAGTSARK 64
+SS ++ + P P KR T S S + P LR HS++ ++
Sbjct: 333 SSSSQSGSSIQRHSPSPRRKR------TPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQ 386
Query: 65 SQRREEKRREEKRREEKRR-------EEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEE 117
S R EK R + R +RRE R +++ EK+ EE E E+++ +
Sbjct: 387 SPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDH 446
Query: 118 EEE 120
++
Sbjct: 447 RDD 449
Score = 38.9 bits (89), Expect = 0.001
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 40 TNSTSSVKEEPPTLR--HSMAGTSARKSQRREEKR------REEKRREEKRREEKRREGK 91
+ S SS + P + R HS +G+ + + +E R RE +RR+ ++RE R K
Sbjct: 1270 SRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADK 1329
Query: 92 ----RREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
R+++ +E E E E ++ + + E E +S S+ ER+ + + R
Sbjct: 1330 DWPRNRDRDRLRERERERERDKRRDLDRERERLISDSV---ERDRDRDRDR 1377
Score = 37.4 bits (85), Expect = 0.004
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Query: 24 STFPYP-HSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKR-REEKRREEK 81
S PYP HS S+ K+ PP R M +R + R +RRE+
Sbjct: 370 SASPYPSHSL---------SSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDT 420
Query: 82 RREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
R + R + R E+E E+++ + ++ E + + + R ++ + R
Sbjct: 421 RGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMR 477
Score = 36.2 bits (82), Expect = 0.009
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 7 SRGFSSA-SSPENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKS 65
SR SS SSPE+DR + HS+ +G +S ++E R R+
Sbjct: 1270 SRSHSSRRSSPESDRQV-------HSR----SGSFDSRDRLQE-----RDRYEHDRERER 1313
Query: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEE 112
+RR+ ++RE R +K R + RE+E E+E ++ + + E E
Sbjct: 1314 ERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDRERE 1360
Score = 35.0 bits (79), Expect = 0.021
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 64 KSQRREEKRREEKRREEKRREEKRRE---GKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
K++R++ +KR E+ R+E G+ REKE+ K +E E EEE E E +
Sbjct: 90 KNKRQDVDTEPQKRNTEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEWETNRD 149
Query: 121 VS 122
S
Sbjct: 150 DS 151
Score = 33.1 bits (74), Expect = 0.079
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSF 123
+R + KR++ +KR E+ R+E + E+E+ + +E E EEE V +
Sbjct: 87 ERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEW 144
Score = 30.8 bits (68), Expect = 0.39
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 71 KRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
K+ +EK + + R EEK R+GK R ++ E++ E+ ++
Sbjct: 278 KKYKEKYKVKDRIEEKTRDGKDRGRDFERQREKRDK 313
Score = 30.8 bits (68), Expect = 0.39
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 73 REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
R+ + +EE R+ E++ +R E++E KE+ +++ E+ E
Sbjct: 885 RQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTE 925
Score = 30.4 bits (67), Expect = 0.52
Identities = 20/81 (24%), Positives = 31/81 (38%)
Query: 59 GTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEE 118
G S R RR +R RE + + + + E +K EE +E
Sbjct: 62 GPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGRH 121
Query: 119 EEVSFSLATRERETETEEKRL 139
E T+ER E+EE+ +
Sbjct: 122 REKEDIKITKERTPESEEENV 142
Score = 30.4 bits (67), Expect = 0.52
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Query: 30 HSKRENLAGLTNSTSSVKEEPPTLR--HSMAGTSARKSQRREEKRR----EEKRREEKRR 83
H +R++ N S + P R HS + + EK R + +E +
Sbjct: 817 HDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQESRSL 876
Query: 84 EEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
R+ + +E++ + E +E EE+E +E+VS RE+ E R+
Sbjct: 877 SPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRM 932
Score = 30.4 bits (67), Expect = 0.52
Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 40 TNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEK 99
+ STSS +++ + HS +S ++ + R+ + ++ + RE+E
Sbjct: 1260 SRSTSSDRQDSRS--HSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRD 1317
Query: 100 EEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
+ E + + +++ + + L RERE E +++R
Sbjct: 1318 TRQREWDRDADKDWPRNRDRD---RLRERERERERDKRR 1353
Score = 30.0 bits (66), Expect = 0.67
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 65 SQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFS 124
++ R+ + +EE R+ E R+E RR ++ KE+ +++ E+ E E +++
Sbjct: 882 TEDRQGRWKEEDRKPE-RKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGH 940
Query: 125 LATRERET 132
+ +RET
Sbjct: 941 HQSEDRET 948
Score = 29.6 bits (65), Expect = 0.88
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 30 HSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRRE 89
H +RE+ G + +EE R S+ + R + + R+ + R + R RRE
Sbjct: 414 HERREDTRGKRDREKDSREE----REYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRE 469
Query: 90 GKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERE 131
+ + E + + +E + + + R+RE
Sbjct: 470 LRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDRE 511
Score = 29.6 bits (65), Expect = 0.88
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEE 114
R+ + R+ R+E+ EE R G+ +EE E E E E
Sbjct: 508 RDREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSE 554
Score = 29.6 bits (65), Expect = 0.88
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 60 TSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEE----- 114
T R+ + +EE R+ E++ +R EE+ + K ++++E+ E E ++
Sbjct: 882 TEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHH 941
Query: 115 EEEEEEVS 122
+ E+ E S
Sbjct: 942 QSEDRETS 949
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEV- 121
R ++ R+E R R +E + K R E E+E E E ++ + + + V
Sbjct: 103 RNTEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVH 162
Query: 122 SFSLATRERETETEEKRL 139
SL + ++ + E +L
Sbjct: 163 ELSLEMKRQKIQRELMKL 180
Score = 26.6 bits (57), Expect = 7.4
Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 18/113 (15%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKR-----------REEKRREGKR--- 92
+EE R + + RE R +K RE +R R EKR E +
Sbjct: 753 REERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRN 812
Query: 93 ----REKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLIS 141
++ + K+ E + + E S A + + E+ RL+S
Sbjct: 813 PRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLS 865
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 59.7 bits (143), Expect = 8e-10
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 27 PYPHSKRENLAGLT---NSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRR 83
PYP +E++ + + + E R + K ++ +E++ EK R E+ R
Sbjct: 255 PYPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERER 314
Query: 84 EEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
E+ RE +RRE+E E+E E E E+E+E E E E + + T+ER+ + + +R
Sbjct: 315 -ERERERERREREREREREREREKEKERERERERDRDRD---RTKERDRDRDRER 365
Score = 57.8 bits (138), Expect = 3e-09
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 54 RHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
R+ S KS+ RE +R E+ RE +R E+ RE +R + E + E E++++ + EE+
Sbjct: 377 RNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREED 436
Query: 114 EEEEEEEVSFSLATRERETETEEK 137
EE+ E RE+E +E+
Sbjct: 437 EEDAYERRKLERKLREKEAAYQER 460
Score = 55.5 bits (132), Expect = 1e-08
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 54 RHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
R S +S+ + R E+ RE +R E+ RE + RE+E E+E E E E E++++
Sbjct: 373 RSSDRNKDRSRSREKSRDRERERERERERERERERE-REREREREREREREREREKDKKR 431
Query: 114 EEEEEEEVSFSLATRERETETEE 136
+ EE+EE ++ ER+ +E
Sbjct: 432 DREEDEEDAYERRKLERKLREKE 454
Score = 55.1 bits (131), Expect = 2e-08
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R +R ++ ++ R EK R+ +R + RE+E E+E E E E E E E E E E E
Sbjct: 369 RDRERSSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKD 428
Query: 123 FSLATRERETETEEKR 138
E E + E+R
Sbjct: 429 KKRDREEDEEDAYERR 444
Score = 54.7 bits (130), Expect = 3e-08
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R+ R ++ R R +++ R ++ + RE+E E+E E E E E E E E E E E
Sbjct: 363 RERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERE-- 420
Query: 123 FSLATRERETETEEKR 138
RERE E ++KR
Sbjct: 421 -----REREREKDKKR 431
Score = 54.3 bits (129), Expect = 3e-08
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 59 GTSARKSQRREEKRREEKRREEKRREEKRREGKR-REKEEEKEEEEEEEEEEEEEEEEEE 117
G ++ Q E++RRE +R E+ RE + RE +R RE+E EKE+E E E E + + + +
Sbjct: 296 GKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTK 355
Query: 118 EEEVSFSLATRERETETEEKR 138
E + RER+ + + +R
Sbjct: 356 ERDRD---RDRERDRDRDRER 373
Score = 51.6 bits (122), Expect = 2e-07
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R+ +R E+ RE +R E+ RE +R + REK+++++ EE+EE+ E + E + E
Sbjct: 395 REREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKE 454
Query: 123 FSLATRERETETEEKR 138
+ R + E E++
Sbjct: 455 AAYQERLKNWEIRERK 470
Score = 50.4 bits (119), Expect = 5e-07
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
R+ +R E+ RE +R E+ RE +R + ++K+ ++EE+EE+ E + E + E+E +
Sbjct: 397 REREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAA 456
Query: 123 FSLATR-------------ERETETEEKR 138
+ + E+E E EE+R
Sbjct: 457 YQERLKNWEIRERKKTREYEKEAEREEER 485
Score = 50.1 bits (118), Expect = 6e-07
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 25/115 (21%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKR------------------- 87
+++P R S R ++ E +++RE++ EE R
Sbjct: 507 RDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRME 566
Query: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLISP 142
+E +RR + + K+E E EEEEEE++E+EE+ EE E E E E+K + P
Sbjct: 567 QEAERRRQPQIKQEPESEEEEEEKQEKEEKREE------PMEEEEEPEQKPCLKP 615
Score = 46.6 bits (109), Expect = 7e-06
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 23 LSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKR 82
+S F H K E G K+E + + RE +RRE +R E+
Sbjct: 281 ISKFRDTHKKLEEEKG--------KKEKERQEIEKERRERERERERERERRERERERERE 332
Query: 83 REEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSL-----------ATRERE 131
RE ++ + + RE+E +++ + +E + + + E + + + S +R+RE
Sbjct: 333 REREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRE 392
Query: 132 TETEEKR 138
E E +R
Sbjct: 393 RERERER 399
Score = 42.0 bits (97), Expect = 2e-04
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 21/87 (24%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKE----------EEKEEEEEEEEEEEEE 112
R+ +R ++K+R+ + EE E ++ E K REKE E +E ++ E E+E E
Sbjct: 421 REREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAE 480
Query: 113 EEEEEEEEVSFSLATRERETETEEKRL 139
EEE R RE E KRL
Sbjct: 481 REEE-----------RRREMAKEAKRL 496
Score = 35.8 bits (81), Expect = 0.012
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 63 RKSQRREEKR--REEKRREEKRREEKR------------------REGKRREKEEEKEEE 102
RK R EK REE+RR E +E KR R +++ ++E+E
Sbjct: 469 RKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKE 528
Query: 103 EEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
E +E + + E+EE EE LA + + E +R+
Sbjct: 529 MEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRM 565
Score = 33.5 bits (75), Expect = 0.061
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 63 RKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEE---------EEEEE 113
R+ R+ + +E +E + E R K RE E+E E EEE E E E+
Sbjct: 443 RRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLED 502
Query: 114 EEEEEEEVSF--------SLATRERETETEEK 137
+++ ++ + L RE+E E +E+
Sbjct: 503 YDDDRDDPKYYRGSALQKRLRDREKEMEADER 534
Score = 27.7 bits (60), Expect = 3.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
+++E R + EEK+ +E++REE EE+ E K
Sbjct: 565 MEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQK 610
>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
sapiens]
Length = 1925
Score = 59.7 bits (143), Expect = 8e-10
Identities = 34/62 (54%), Positives = 39/62 (62%)
Query: 76 KRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETE 135
K+ +E R E GK+ E EEEK EEEEEE EEEEEEEEE EEE E+E E +
Sbjct: 1744 KQPKEDRPEHYPGLGKKEEGEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEERD 1803
Query: 136 EK 137
EK
Sbjct: 1804 EK 1805
Score = 50.4 bits (119), Expect = 5e-07
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 73 REEKRREEKRREEKRREGKRREKEEEKEEEE--EEEEEEEEEEEEEEEEEVSFSLATRER 130
++E+ EEK EE+ + E+EEE EEEE +EE EE+EEE +E+EE+VS++
Sbjct: 1759 KKEEGEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEERDEKEEKVSWAGIGPTP 1818
Query: 131 ETETEE 136
+ E++E
Sbjct: 1819 QPESQE 1824
Score = 48.9 bits (115), Expect = 1e-06
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 75 EKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETET 134
E + ++ +E++ K+EE EEE+ EEEEEE EEEEEEEEE +E E
Sbjct: 1739 EDGKGKQPKEDRPEHYPGLGKKEEGEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEK 1798
Query: 135 EEKR 138
EE+R
Sbjct: 1799 EEER 1802
Score = 43.9 bits (102), Expect = 5e-05
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 17 ENDRILLSTFPYPHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEK 76
+N L+ P P S E+ G KE+ P G ++ E+ EE+
Sbjct: 1722 KNSLYLMPILPVPSSSWEDGKG-----KQPKEDRP---EHYPGLGKKEEGEEEKGEEEEE 1773
Query: 77 RREEKRREEKRREGKRREKEEEKEEEEEEEEEEEE 111
EE+ EE+ E + KEE +E+EEE +E+EE+
Sbjct: 1774 ELEEEEEEEEETEEEELGKEEIEEKEEERDEKEEK 1808
Score = 35.0 bits (79), Expect = 0.021
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 89 EGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
+GK ++ +E++ E ++EE EEE+ EEE E E ETEE+ L
Sbjct: 1740 DGKGKQPKEDRPEHYPGLGKKEEGEEEKGEEEEEELEEEEEEEEETEEEEL 1790
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 59.3 bits (142), Expect = 1e-09
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 29 PHSKRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREE--- 85
P K + S EE +L + + S+ EE+ EE+R EE+ REE
Sbjct: 2209 PKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEE 2268
Query: 86 -------------KRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERET 132
K E K+++K+E+K+EE +E+EE EE+EE EE + SL+ E E
Sbjct: 2269 RKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEE 2328
Query: 133 ET 134
E+
Sbjct: 2329 ES 2330
Score = 58.5 bits (140), Expect = 2e-09
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 60 TSARKSQRREEKRREE---KRREEKRREEKRREGKRREKEEE----KEEEEEEEEEEEEE 112
+S + +R EE+ REE + EE+R+EE+ E K+ EKEEE K++E+++EE +E+E
Sbjct: 2244 SSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKE 2303
Query: 113 EEEEEEEEVSFSLATRERETETEEKRLIS 141
E EE+EE+ T E EE+ S
Sbjct: 2304 EVFEEKEEIMSEEETESLSDEEEEEESCS 2332
Score = 57.8 bits (138), Expect = 3e-09
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 16/120 (13%)
Query: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
E+L S+ E R + + EE+R+EE+ EEK+ E++ E K++
Sbjct: 2231 ESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKK 2290
Query: 94 EKEEEKEEEEEEEEEEEEEEE------------EEEEEEVSFSL---ATRERETETEEKR 138
+KE++KEE +E+EE EE+EE EEEEEE S SL RE+E +EK+
Sbjct: 2291 KKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEE-SCSLEEEVDREKEILKKEKQ 2349
Score = 52.8 bits (125), Expect = 1e-07
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 65 SQRREEKRREEKRREEKRR---EEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
S + +E EE EE E +++E E+EEE+EEEEE EEEE EEEEE +EE
Sbjct: 2214 SSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEE 2273
Query: 122 SFSLATRERETETEEKR 138
E+E E ++K+
Sbjct: 2274 EGEEKQVEKEEEEKKKK 2290
Score = 51.2 bits (121), Expect = 3e-07
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 67 RREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEE--------------EEEEEEEE 112
+R ++R+E +R +K +E+ + E EE EE E EEEEE EE
Sbjct: 2194 KRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREE 2253
Query: 113 EEEEEEEEVSFSLATRERETETEEKRL 139
EEE EEEEV R+ E E EEK++
Sbjct: 2254 EEEREEEEVREEEEERKEEEEGEEKQV 2280
Score = 49.7 bits (117), Expect = 8e-07
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRRE--EKRREEKRREEKRREGKRREKEEEKEEEE 103
V+EE + G + + EEK+++ EK++EE + +E+ E K EE+ E
Sbjct: 2262 VREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESL 2321
Query: 104 EEEEEEEEEEEEEEEEEVSFSLATRERETETEEKR 138
+EEEEEE EEE + + +E++ + +E+R
Sbjct: 2322 SDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQR 2356
Score = 40.0 bits (92), Expect = 7e-04
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 34 ENLAGLTNSTSSVK-EEPPTLRHSMAGTSARKSQRREEKRR--EEKRREEKRREEKRREG 90
EN+ + K EE TL ++ K Q+ E++R +E+ + + ++ R
Sbjct: 1526 ENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHKWARIHRKRARAE 1585
Query: 91 KRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
K+R +EE K +EEE+ +EE + +EE +++
Sbjct: 1586 KKRAQEERKLAQEEEKLAQEERQLAQEERKLA 1617
Score = 38.5 bits (88), Expect = 0.002
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGK 91
K LA + N + EE P ++ +Q EE + + K E + EGK
Sbjct: 1682 KGGKLAEVKNILAQKVEELPQREQNLDWQEKELAQELEELEWDMEELSWKEEELNQEEGK 1741
Query: 92 RREKEEEKEEEEE-----EEEEEEEEEEEEEEEEVSF----SLATRERETETEEKRL 139
E++++ EEEE E+ EEE + +EEE+ LA + + EE+RL
Sbjct: 1742 LVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERL 1798
Score = 36.6 bits (83), Expect = 0.007
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLAT 127
RE + +E++ EE+R ++ + R ++ + E++ +EE + +EEE+ LA
Sbjct: 1552 REGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEK-------LAQ 1604
Query: 128 RERETETEEKRL 139
ER+ EE++L
Sbjct: 1605 EERQLAQEERKL 1616
Score = 35.4 bits (80), Expect = 0.016
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 65 SQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEE-------EEEEEEEEEEEEEE 117
S++R E ++EK+ K+R+ + + KEE+ EEE E ++EEE E
Sbjct: 2126 SEKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIE 2185
Query: 118 EEEVSFSLATRERETETEEKR 138
EEEV L R R+ + E KR
Sbjct: 2186 EEEVIPFLKRRWRKRK-EAKR 2205
Score = 35.0 bits (79), Expect = 0.021
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 4 YGHSRGFSSASSPENDRILLSTFPYPHSKRENLAGLTNSTSSVK----EEPPTLRHSMAG 59
+G +R A E ++ LL H E L+ K EE + +M
Sbjct: 1471 HGETRKSWKAWKEEWEKRLLQEEEKLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLS 1530
Query: 60 TSARKSQRREEKR---REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEE 116
+ +++ Q ++E+ EE RE + +E++ E +R +EE K + E++ +
Sbjct: 1531 SKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKKRAQ 1590
Query: 117 EEEEVSFSLATRERETETEEKRL 139
EE + LA E + EE++L
Sbjct: 1591 EERK----LAQEEEKLAQEERQL 1609
Score = 32.3 bits (72), Expect = 0.14
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 60 TSARKSQRREEKRREEKRREEKRR--EEKRREGK-RREKEEEKEEEEEEEEEEEEEEEEE 116
T ++ ++EEK+ +K ++ R+ +++R+ GK +RE +E+ + EE EE EE+
Sbjct: 1382 TMGKEISKKEEKKTFQKSPKQGRKAVQKERKVGKIKREMTKEERDMSEEVEEMATLEEKV 1441
Query: 117 EEEE 120
++E
Sbjct: 1442 VKQE 1445
Score = 31.6 bits (70), Expect = 0.23
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 46 VKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEE- 104
V EE ++ + + R EK+R ++ R+ + EEK + +R+ +EE++ +
Sbjct: 1561 VTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQAY 1620
Query: 105 ---EEEEEEEEEEEEEEEEVSFSLATRERETETEEKRL 139
+++ E + E + + +LA R + E ++L
Sbjct: 1621 VKITQDDREMAQAEGKFAQKEETLAQRGEKLSQEAEKL 1658
Score = 31.6 bits (70), Expect = 0.23
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 62 ARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEE 113
ARK ++ K R +EEK EE E K K E ++EEE EEEE
Sbjct: 2140 ARKQRKLANKMRRMINKEEKMTEE---ESKLARKHSEVILDDEEEGGIEEEE 2188
Score = 30.8 bits (68), Expect = 0.39
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 73 REEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERET 132
+E ++EEK+ +K K+ K +KE + + + E +EE + EEV +AT E +
Sbjct: 1385 KEISKKEEKKTFQK--SPKQGRKAVQKERKVGKIKREMTKEERDMSEEVE-EMATLEEKV 1441
Query: 133 ETEEKRLI 140
+E +L+
Sbjct: 1442 VKQEGKLV 1449
Score = 30.0 bits (66), Expect = 0.67
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 68 REEKRREEKRREEKRREEKRREGKRREKEEEKEEEE-----EEEEEEEEEEEEEE-EEEV 121
+EE++ + + EE +E K+ + EE K+ E + +E++ ++EEE EEEV
Sbjct: 1491 QEEEKLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEV 1550
Query: 122 SFSLATRERETETEEKRLI 140
S +E++ TEE+R I
Sbjct: 1551 SREGEEKEQQV-TEEQRHI 1568
Score = 30.0 bits (66), Expect = 0.67
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKE---------- 96
KEE + K ++++EK++EE + +E+ EEK E E
Sbjct: 2270 KEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEE 2329
Query: 97 ----EEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRER 130
EE+ + E+E ++E++ + +E+ SL RER
Sbjct: 2330 SCSLEEEVDREKEILKKEKQFKLQEQRRK--SLRGRER 2365
Score = 29.6 bits (65), Expect = 0.88
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 28/124 (22%)
Query: 39 LTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKR---REEKRREEKR------------- 82
+T ++EE R A K + +EE++ EEK +E+R
Sbjct: 1561 VTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQAY 1620
Query: 83 -------REEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETE 135
RE + EGK +KEE + E+ +E E+ ++ ++ LA + + E
Sbjct: 1621 VKITQDDREMAQAEGKFAQKEETLAQRGEKLSQEAEKLAQKRKK-----LAKKWEKVARE 1675
Query: 136 EKRL 139
E++L
Sbjct: 1676 EEKL 1679
Score = 29.3 bits (64), Expect = 1.1
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 62 ARKSQRREEKRREEKRREEK--RREEK--RREGKRRE-------KEEEKEEEEEEEEEEE 110
++++++ +KR++ ++ EK R EEK ++ GK E K EE + E+ + +E
Sbjct: 1652 SQEAEKLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVKNILAQKVEELPQREQNLDWQE 1711
Query: 111 EEEEEEEEEEV--SFSLATRERETETEEKRLI 140
+E +E EE L+ +E E EE +L+
Sbjct: 1712 KELAQELEELEWDMEELSWKEEELNQEEGKLV 1743
Score = 29.3 bits (64), Expect = 1.1
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 18/86 (20%)
Query: 65 SQRREEKRREE-KRREEKRR--EEKRREGKRREKEEEKE----EEEE---EEEEEEEEEE 114
S + EE +EE K EEK++ EE+ +REK E+E +EEE +E+E+ + +
Sbjct: 1729 SWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHK 1788
Query: 115 E---EEEEEVSFSLATRERETETEEK 137
E EEEE + R+RE E+K
Sbjct: 1789 EKMPEEEERLG-----RKREQLIEKK 1809
Score = 27.3 bits (59), Expect = 4.4
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 32 KRENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEK----RREEKRREEKR 87
KR+ LA + +E+ +A +Q+ EE + E+ + +E +E +
Sbjct: 1661 KRKKLAKKWEKVAREEEKLAKKGGKLAEVKNILAQKVEELPQREQNLDWQEKELAQELEE 1720
Query: 88 REGKRRE---KEEEKEEEEEE--EEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
E E KEEE +EE + EE+++ EEEE L+ E + EE+ LI
Sbjct: 1721 LEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLI 1778
Score = 26.9 bits (58), Expect = 5.7
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRR----EEKRREEKRREGKRREKEEEKEEE 102
+EE + K + EE +EK + +EK EE+ R G++RE+ EK+ +
Sbjct: 1752 EEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKKMK 1811
Query: 103 EEEEEEEEEEEEEE 116
++ E EE
Sbjct: 1812 LAQKRERWINSMEE 1825
Score = 26.2 bits (56), Expect = 9.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 45 SVKEEPPTLRHS-MAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEE 101
S KEE T + S G A + +R+ K + E +EE+ E+ E E++ K+E
Sbjct: 1388 SKKEEKKTFQKSPKQGRKAVQKERKVGKIKREMTKEERDMSEEVEEMATLEEKVVKQE 1445
Score = 26.2 bits (56), Expect = 9.7
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 45 SVKEEPPTLRHSMAGTSARKSQRREEKR--REEKRREEKRREEKRREGKRREKEEEKEEE 102
S KEE +K EE + EK EE+ + + E +EKE+ + +
Sbjct: 1729 SWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHK 1788
Query: 103 EEEEEEEEEEEEEEEE 118
E+ EEEE + E+
Sbjct: 1789 EKMPEEEERLGRKREQ 1804
Score = 26.2 bits (56), Expect = 9.7
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 76 KRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETE 135
++R E ++EK+ K+R K K +EE+ EEE + + S + E E E
Sbjct: 2127 EKRSELTKDEKKLARKQR-KLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIE 2185
Query: 136 EKRLI 140
E+ +I
Sbjct: 2186 EEEVI 2190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.296 0.117 0.292
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,083,536
Number of Sequences: 37866
Number of extensions: 516475
Number of successful extensions: 94723
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2718
Number of HSP's successfully gapped in prelim test: 444
Number of HSP's that attempted gapping in prelim test: 6502
Number of HSP's gapped (non-prelim): 31356
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.