Guide to the Human Genome
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Search of human proteins with 239744867

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744867 PREDICTED: hypothetical protein XP_002344117 [Homo
sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750566 PREDICTED: hypothetical protein XP_002347457 [Homo ...   306   4e-84
gi|239744867 PREDICTED: hypothetical protein XP_002344117 [Homo ...   306   4e-84
gi|239756043 PREDICTED: similar to hCG2041645 [Homo sapiens]          305   1e-83
gi|134142824 forkhead box D2 [Homo sapiens]                            32   0.25 
gi|76880480 hypothetical protein LOC9865 [Homo sapiens]                30   0.55 
gi|89257335 oleoyl-ACP hydrolase isoform 2 [Homo sapiens]              30   0.72 
gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens]               30   0.72 
gi|169172087 PREDICTED: hypothetical protein [Homo sapiens]            30   0.95 
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    30   0.95 
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    30   0.95 
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     30   0.95 
gi|239756886 PREDICTED: hypothetical protein [Homo sapiens]            29   1.2  
gi|169171680 PREDICTED: hypothetical protein [Homo sapiens]            29   1.2  
gi|239751382 PREDICTED: hypothetical protein XP_002347832 [Homo ...    29   1.2  
gi|239745889 PREDICTED: hypothetical protein XP_002343609 [Homo ...    29   1.2  
gi|169164452 PREDICTED: similar to hCG1643669 [Homo sapiens]           29   1.6  
gi|169164815 PREDICTED: similar to hCG1643669 [Homo sapiens]           29   1.6  
gi|169163509 PREDICTED: hypothetical protein LOC100131482 [Homo ...    29   1.6  
gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]    29   1.6  
gi|31324577 molecule interacting with Rab13 [Homo sapiens]             28   2.1  
gi|117938768 GNAS complex locus alex [Homo sapiens]                    28   2.8  
gi|169636420 carbonic anhydrase IX precursor [Homo sapiens]            28   2.8  
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...    28   2.8  
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]    28   2.8  
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c...    28   3.6  
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca...    28   3.6  
gi|169194585 PREDICTED: similar to hCG1793014 [Homo sapiens]           28   3.6  
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ...    28   3.6  
gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo ...    28   3.6  
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ...    28   3.6  

>gi|239750566 PREDICTED: hypothetical protein XP_002347457 [Homo
           sapiens]
          Length = 147

 Score =  306 bits (784), Expect = 4e-84
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MRSQGRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL 60
           MRSQGRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL
Sbjct: 1   MRSQGRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL 60

Query: 61  LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC 120
           LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC
Sbjct: 61  LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC 120

Query: 121 SDPYLDCTSTLHPEDLNMLTGGCRFVF 147
           SDPYLDCTSTLHPEDLNMLTGGCRFVF
Sbjct: 121 SDPYLDCTSTLHPEDLNMLTGGCRFVF 147


>gi|239744867 PREDICTED: hypothetical protein XP_002344117 [Homo
           sapiens]
          Length = 147

 Score =  306 bits (784), Expect = 4e-84
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MRSQGRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL 60
           MRSQGRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL
Sbjct: 1   MRSQGRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL 60

Query: 61  LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC 120
           LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC
Sbjct: 61  LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC 120

Query: 121 SDPYLDCTSTLHPEDLNMLTGGCRFVF 147
           SDPYLDCTSTLHPEDLNMLTGGCRFVF
Sbjct: 121 SDPYLDCTSTLHPEDLNMLTGGCRFVF 147


>gi|239756043 PREDICTED: similar to hCG2041645 [Homo sapiens]
          Length = 147

 Score =  305 bits (780), Expect = 1e-83
 Identities = 146/147 (99%), Positives = 146/147 (99%)

Query: 1   MRSQGRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL 60
           MRSQGRAPAGSAPSFLPGKGS GGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL
Sbjct: 1   MRSQGRAPAGSAPSFLPGKGSTGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL 60

Query: 61  LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC 120
           LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC
Sbjct: 61  LISPETGRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGIQTLLISIC 120

Query: 121 SDPYLDCTSTLHPEDLNMLTGGCRFVF 147
           SDPYLDCTSTLHPEDLNMLTGGCRFVF
Sbjct: 121 SDPYLDCTSTLHPEDLNMLTGGCRFVF 147


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score = 31.6 bits (70), Expect = 0.25
 Identities = 30/102 (29%), Positives = 35/102 (34%), Gaps = 21/102 (20%)

Query: 7   APAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPLLISPET 66
           A AGSAP+  P  GS  G  P  L   L A             L C +   A  L  P  
Sbjct: 329 AGAGSAPAPAPASGSGPGPGPAGLPAFLGA------------ELGCAKAFYAASLSPPAA 376

Query: 67  GRPAPSTRVVSFRAVPRSWLPRGLLTAVGSGHSDADRGLNAR 108
           G  A          +P + L +GL T  G G      G   R
Sbjct: 377 GTAA---------GLPTALLRQGLKTDAGGGAGGGGAGAGQR 409


>gi|76880480 hypothetical protein LOC9865 [Homo sapiens]
          Length = 811

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 16  LPGKGSAGGVAPESLTLVLSAASPLV--------DPRWPRIPLDCRRWAGAPL 60
           LP  GS GGV  + LTL L   + L+          RW R  L  RR  GAP+
Sbjct: 684 LPEAGSRGGVDYQLLTLALLTVNALLVLLALAAWASRWLRRKLRARRKGGAPV 736


>gi|89257335 oleoyl-ACP hydrolase isoform 2 [Homo sapiens]
          Length = 265

 Score = 30.0 bits (66), Expect = 0.72
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 10  GSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLD 51
           GS  +F    G      PE L L LS+A+P+    W RIP D
Sbjct: 103 GSYIAFRTALGLKENNQPEPLHLFLSSATPVHSKAWHRIPKD 144


>gi|8922871 oleoyl-ACP hydrolase isoform 1 [Homo sapiens]
          Length = 318

 Score = 30.0 bits (66), Expect = 0.72
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 10  GSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLD 51
           GS  +F    G      PE L L LS+A+P+    W RIP D
Sbjct: 156 GSYIAFRTALGLKENNQPEPLHLFLSSATPVHSKAWHRIPKD 197


>gi|169172087 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 18  GKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWA-GAPLLISPETGRPAPSTRVV 76
           G+   GG    S  L LSAAS     R P      R W  GAP+ + P   RPAP+    
Sbjct: 45  GRCRRGGDPRPSAHLKLSAASDWRAQRGPGEGRGLRHWPRGAPVTV-PAARRPAPA---- 99

Query: 77  SFRAVPRSWLPRGLLTAVGSGHSDADRGLNARWYGI 112
                PR     G   A+  G ++ +  L    +G+
Sbjct: 100 -----PRGPKQPGCCAALAGGDTNGEWILRGSTWGL 130


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 7    APAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPLLISPET 66
            AP    PS  P   +    +P +  LV     PL +P  P  PL        PL  SPE+
Sbjct: 4908 APPPEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVPS-PL--------PLASSPES 4958

Query: 67   GRPAPSTR 74
             RP P  R
Sbjct: 4959 ARPKPRAR 4966


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
            sapiens]
          Length = 2715

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 24/98 (24%)

Query: 13   PSFLPGKGSAGGVA---------PESLTLVLSAASPLVDPRWPRIPLDCRR--------- 54
            P++ P +   GGV+         P SLT  +       DP +P  P   RR         
Sbjct: 1868 PNYSPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVG---DPDFPAPPRRSRRPSPLAPRPP 1924

Query: 55   ---WAGAPLLISPETGRPAPSTRVVSFRAVPRSWLPRG 89
               WA  PL  SP+   P P++ V +         P G
Sbjct: 1925 PSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELAPPG 1962


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 14/87 (16%)

Query: 5   GRAPAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPLLISP 64
           G A  G+AP  +P  G   G  P     V   + PL+DP            A  P    P
Sbjct: 91  GGADGGAAPEPVPPDGPEAGAPPTLAPAVAPGSLPLLDPN-----------ASPP---PP 136

Query: 65  ETGRPAPSTRVVSFRAVPRSWLPRGLL 91
              RP+P      F   P +  P  LL
Sbjct: 137 PPPRPSPPDVFAGFAPHPAALGPPTLL 163


>gi|239756886 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 207

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 13/66 (19%)

Query: 8   PAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDC----RRWAGAPLLIS 63
           PA S  +++PGK            L+L  AS   D   P + L C    R W G PL + 
Sbjct: 80  PAISPRTYIPGKVG---------DLILVEASLPKDSPAPLVHLSCELRVRGWKGTPLHLG 130

Query: 64  PETGRP 69
            E G P
Sbjct: 131 EECGAP 136


>gi|169171680 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 226

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 62  ISPETGRPA---PSTRVVSFRAVPRSWLPRGLLTAVGSGHSDA 101
           ISP T  PA   P       R    S LPRGL  +VGS H  A
Sbjct: 131 ISPGTPHPAAHPPERTAPHLRGPVASGLPRGLRVSVGSPHVSA 173


>gi|239751382 PREDICTED: hypothetical protein XP_002347832 [Homo
           sapiens]
          Length = 207

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 13/66 (19%)

Query: 8   PAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDC----RRWAGAPLLIS 63
           PA S  +++PGK            L+L  AS   D   P + L C    R W G PL + 
Sbjct: 80  PAISPRTYIPGKVG---------DLILVEASLPKDSPAPLVHLSCELRVRGWKGTPLHLG 130

Query: 64  PETGRP 69
            E G P
Sbjct: 131 EECGAP 136


>gi|239745889 PREDICTED: hypothetical protein XP_002343609 [Homo
           sapiens]
          Length = 207

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 13/66 (19%)

Query: 8   PAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLDC----RRWAGAPLLIS 63
           PA S  +++PGK            L+L  AS   D   P + L C    R W G PL + 
Sbjct: 80  PAISPRTYIPGKVG---------DLILVEASLPKDSPAPLVHLSCELRVRGWKGTPLHLG 130

Query: 64  PETGRP 69
            E G P
Sbjct: 131 EECGAP 136


>gi|169164452 PREDICTED: similar to hCG1643669 [Homo sapiens]
          Length = 157

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 50  LDCRRWAGAPLLISPETGRPAPSTRVVS 77
           +DCR   G  L++SP+T  P+P T   S
Sbjct: 118 VDCRALNGGDLVLSPKTTPPSPDTEAPS 145


>gi|169164815 PREDICTED: similar to hCG1643669 [Homo sapiens]
          Length = 157

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 50  LDCRRWAGAPLLISPETGRPAPSTRVVS 77
           +DCR   G  L++SP+T  P+P T   S
Sbjct: 118 VDCRALNGGDLVLSPKTTPPSPDTEAPS 145


>gi|169163509 PREDICTED: hypothetical protein LOC100131482 [Homo
           sapiens]
          Length = 157

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 50  LDCRRWAGAPLLISPETGRPAPSTRVVS 77
           +DCR   G  L++SP+T  P+P T   S
Sbjct: 118 VDCRALNGGDLVLSPKTTPPSPDTEAPS 145


>gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]
          Length = 6306

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 8    PAGSAPSFLPGKGS--AGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPLLISPE 65
            P  S   F PG G   AGG   +S T  L  A   V P W R        A   L  SP+
Sbjct: 6175 PGPSTAFFTPGSGMPPAGGEISKS-TQNLIGAMEEVPPDWERASFQQGSQASPDLKPSPQ 6233

Query: 66   TGRPAPST 73
             G   PS+
Sbjct: 6234 NGATFPSS 6241


>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
          Length = 863

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 19  KGSAGGVAPESLTLVLSAASPLVDPRW-PRIPLDCRRWAGAPLLISPETGRPAPSTRVVS 77
           K   GG    S      A  P   P   P+IP   R       L SP  GRP P+ R  S
Sbjct: 250 KDVPGGGPSSSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKAS 309

Query: 78  FRAVPRSWLPR 88
               P    PR
Sbjct: 310 ESTTPAPPTPR 320


>gi|117938768 GNAS complex locus alex [Homo sapiens]
          Length = 626

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 46  PRIPLDCRRWAGAPLLISPETGRPAPSTRVVSFRAVPRSWLP----RGLLTAVGSGHS 99
           P +P    + AG PL   P    P P  R +S    PRS LP    RGLL  +  G S
Sbjct: 439 PLLPPGQPKSAGRPLQPLP----PGPDARSISDPPAPRSRLPIRLLRGLLARLPGGAS 492


>gi|169636420 carbonic anhydrase IX precursor [Homo sapiens]
          Length = 459

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 16/84 (19%)

Query: 42  DPRWPRIPLDCRRWAGAPLLISPETGRPAPSTR---VVSFRAVP-------------RSW 85
           DP WPR+   C     +P+ I P+     P+ R   ++ F+  P             +  
Sbjct: 146 DPPWPRVSPACAGRFQSPVDIRPQLAAFCPALRPLELLGFQLPPLPELRLRNNGHSVQLT 205

Query: 86  LPRGLLTAVGSGHSDADRGLNARW 109
           LP GL  A+G G       L+  W
Sbjct: 206 LPPGLEMALGPGREYRALQLHLHW 229


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
            sapiens]
          Length = 1336

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 4/44 (9%)

Query: 8    PAGSAPSF----LPGKGSAGGVAPESLTLVLSAASPLVDPRWPR 47
            PAG+ P F     P   +A  V P    L     SP    RWPR
Sbjct: 1020 PAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPR 1063


>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
          Length = 955

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 29/79 (36%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 22  AGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPL--LISPETGRPAPSTRVVSFR 79
           AG   P SL L L+A  P      PR+        GAP   L SP   +P P T   SF 
Sbjct: 818 AGAHGPHSLALGLTATFPGEPGASPRLSPGPSTPPGAPTLPLASPGAPQPPPVTPERSFS 877

Query: 80  A----VPRSW--LPRGLLT 92
           A    +   W  LP  LLT
Sbjct: 878 ASGAQIVSRWPPLPGTLLT 896


>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 4 isoform 1 [Homo sapiens]
          Length = 964

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 21  SAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRW--AGAPLLISPETGR 68
           S GG  PE   L+LSA  P      P  P   RR+  +G P   SP   R
Sbjct: 300 SPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSR 349


>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 4 isoform 2 [Homo sapiens]
          Length = 902

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 21  SAGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRW--AGAPLLISPETGR 68
           S GG  PE   L+LSA  P      P  P   RR+  +G P   SP   R
Sbjct: 237 SPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGTPSSASPALSR 286


>gi|169194585 PREDICTED: similar to hCG1793014 [Homo sapiens]
          Length = 366

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 7   APAGSAPSFLPGKGSAGGVAPESLTLVLSAASPLVDPRWPRIPLD--CRRW 55
           A   SAP+ +PG+G     AP  +TL    A P + P  P  P    C RW
Sbjct: 274 AGVASAPARIPGRGGDRRFAPGKVTLSGPRAGPPLAPA-PPPPQSGRCPRW 323


>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
           sapiens]
          Length = 355

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 8/62 (12%)

Query: 7   APAGSAPSFLPGKGS--AGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPLLISP 64
           AP GS P++  G G+  AGG     LT   SA S    PR PR+P   RR A   L   P
Sbjct: 116 APRGSGPTYCAGAGNSRAGG----GLTKYNSAHSSSRVPR-PRLPSQ-RRGASCGLGPGP 169

Query: 65  ET 66
           E+
Sbjct: 170 ES 171


>gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo
          sapiens]
          Length = 80

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 56 AGAPLLISPETGRPAPSTRVVSFRAVPRSWLPR 88
          AGAPL  +P    PAP  R +   A P +  PR
Sbjct: 47 AGAPLPSTPPVSNPAPPPRPIPRAATPLTPRPR 79


>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
           sapiens]
          Length = 355

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 8/62 (12%)

Query: 7   APAGSAPSFLPGKGS--AGGVAPESLTLVLSAASPLVDPRWPRIPLDCRRWAGAPLLISP 64
           AP GS P++  G G+  AGG     LT   SA S    PR PR+P   RR A   L   P
Sbjct: 116 APRGSGPTYCAGAGNSRAGG----GLTKYNSAHSSSRVPR-PRLPSQ-RRGASCGLGPGP 169

Query: 65  ET 66
           E+
Sbjct: 170 ES 171


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,921,115
Number of Sequences: 37866
Number of extensions: 351006
Number of successful extensions: 1030
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 993
Number of HSP's gapped (non-prelim): 84
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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