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Search of human proteins with 239744694
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
(373 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 770 0.0
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 770 0.0
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 769 0.0
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 59 9e-09
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 58 1e-08
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 57 2e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 3e-08
gi|169194607 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|169201944 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|169192119 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 54 2e-07
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 54 2e-07
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens] 52 7e-07
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ... 52 7e-07
gi|9966841 cell death regulator aven [Homo sapiens] 52 7e-07
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 52 9e-07
gi|239749709 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 52 1e-06
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 52 1e-06
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 51 2e-06
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 51 2e-06
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 50 3e-06
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 50 3e-06
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 50 3e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 50 4e-06
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 49 6e-06
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 770 bits (1989), Expect = 0.0
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 1 MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL 60
MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL
Sbjct: 1 MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL 60
Query: 61 RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP 120
RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP
Sbjct: 61 RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP 120
Query: 121 AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ 180
AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ
Sbjct: 121 AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ 180
Query: 181 GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER 240
GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER
Sbjct: 181 GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER 240
Query: 241 HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ
Sbjct: 241 HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
Query: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL 360
LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL
Sbjct: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL 360
Query: 361 APPPLPPWLSAVT 373
APPPLPPWLSAVT
Sbjct: 361 APPPLPPWLSAVT 373
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 770 bits (1989), Expect = 0.0
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 1 MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL 60
MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL
Sbjct: 1 MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL 60
Query: 61 RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP 120
RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP
Sbjct: 61 RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP 120
Query: 121 AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ 180
AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ
Sbjct: 121 AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ 180
Query: 181 GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER 240
GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER
Sbjct: 181 GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER 240
Query: 241 HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ
Sbjct: 241 HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
Query: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL 360
LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL
Sbjct: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL 360
Query: 361 APPPLPPWLSAVT 373
APPPLPPWLSAVT
Sbjct: 361 APPPLPPWLSAVT 373
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 769 bits (1986), Expect = 0.0
Identities = 372/373 (99%), Positives = 373/373 (100%)
Query: 1 MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL 60
MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL
Sbjct: 1 MRTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNL 60
Query: 61 RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP 120
RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP
Sbjct: 61 RGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRP 120
Query: 121 AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ 180
AVGTIFRGGRKGRLREGRGA+RGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ
Sbjct: 121 AVGTIFRGGRKGRLREGRGAVRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQ 180
Query: 181 GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER 240
GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER
Sbjct: 181 GAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAER 240
Query: 241 HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ
Sbjct: 241 HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
Query: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL 360
LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL
Sbjct: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKL 360
Query: 361 APPPLPPWLSAVT 373
APPPLPPWLSAVT
Sbjct: 361 APPPLPPWLSAVT 373
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 58.5 bits (140), Expect = 9e-09
Identities = 67/242 (27%), Positives = 89/242 (36%), Gaps = 27/242 (11%)
Query: 83 SGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALR 142
SG PRR R A GD ++ R R R RGGR+ + R + A
Sbjct: 186 SGKKPRR-----RGAKSRGDEDKKGRQREAKSRFGKT-------RGGRRKKHRRPKPAAG 233
Query: 143 GSGKRRGWGLRPQRVRSR--------LAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPT 194
G+ RRG G +PQ+ R R + +G RGG GQ A G + G T
Sbjct: 234 GAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAAT 293
Query: 195 ---HAALRGGGGGSEGGGGGARPSPPRARQPPSGR-PRPRRTRLLGSAERHTGRAALARH 250
A +G GG GG P R + P R + + G+ G+ A
Sbjct: 294 AGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVV 353
Query: 251 GQLSRPHAAVRNSSRGRGAATSVSAAAR---PTRGGARGHRRADGRARGGCAQLRAGTPS 307
G SR R R A++ A +R +G RR DGR + R
Sbjct: 354 GVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQK 413
Query: 308 AP 309
AP
Sbjct: 414 AP 415
Score = 58.2 bits (139), Expect = 1e-08
Identities = 64/258 (24%), Positives = 95/258 (36%), Gaps = 42/258 (16%)
Query: 101 GDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSR 160
G P++ R R + VG GG K R+G+ A KRRG ++ ++
Sbjct: 242 GKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAK 301
Query: 161 LAGLGAPRG-GAAAPR-GWGGQGAERLGVHQPGLPTHAALRGGGG--------------- 203
G P+ G PR G GG+ R G RGGGG
Sbjct: 302 GRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQ 361
Query: 204 ---------------GSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALA 248
G++ GGG + A++ GR +PR A++ AA
Sbjct: 362 RRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQK--APAAKP 419
Query: 249 RHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRR---ADGRARGGCAQLR--- 302
R G +P +++ RG + +P R G + ++ A +RG Q R
Sbjct: 420 RGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKA 479
Query: 303 --AGTPSAPGGLQDCRGR 318
AGT S GGL+ G+
Sbjct: 480 SAAGTKSRGGGLKSHSGK 497
Score = 55.5 bits (132), Expect = 8e-08
Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 15/196 (7%)
Query: 128 GGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQG------ 181
GG+K RLR +GA+ G R+ W + G G + AA + GG+G
Sbjct: 67 GGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRR 126
Query: 182 AERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAE-- 239
++ P A + GS+ G GA+ + A G +P++ G+
Sbjct: 127 GQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRS 186
Query: 240 ----RHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRAR 295
R G + + R A + RG +P GGA+ R G +
Sbjct: 187 GKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRR---GGGK 243
Query: 296 GGCAQLRAGTPSAPGG 311
Q R G +A GG
Sbjct: 244 KPQKQRRRGQKAATGG 259
Score = 50.1 bits (118), Expect = 3e-06
Identities = 81/323 (25%), Positives = 116/323 (35%), Gaps = 37/323 (11%)
Query: 32 KRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRN---PLRTQLSGSPPR 88
+R Q A GT+ G G + A S + RR P R + S + +
Sbjct: 327 RRGQKATKAAAAGTKRG-------GGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAK 379
Query: 89 R----PTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGS 144
LR A GD ++PR + R PA G +K R R + A
Sbjct: 380 SRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRG 439
Query: 145 GKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGV-----HQPGLPTHAALR 199
GK R G + R R + A A GA + RG QG ++ GL +H+
Sbjct: 440 GKSRSGGGKKPRRRGQKARQKAAEAGAES-RGDKKQGRQKASAAGTKSRGGGLKSHSGKN 498
Query: 200 GGGGGSEGGGGGARPSPPRARQPPSGRPRPRR---------TRLLGSAERHTGRAALARH 250
G + G + + A+ GR +PRR +R+ GS R +A A
Sbjct: 499 LWRRGQKAEAAGEKATAAGAKS--RGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAA-- 554
Query: 251 GQLSRPHAAVRNSSRGRG---AATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPS 307
G S + S G G +AAA TRGG + +A G + R+G
Sbjct: 555 GATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGG-DKQPGWQKAAAGVTKSRSGDGG 613
Query: 308 APGGLQDCRGRQGEENAHPFRSG 330
Q G + P+R G
Sbjct: 614 KKAWRQKAAGTGAKSRKKPWRRG 636
Score = 47.4 bits (111), Expect = 2e-05
Identities = 75/281 (26%), Positives = 107/281 (38%), Gaps = 42/281 (14%)
Query: 55 KGRGNLRGAPTAPVSFSRIRRNPLRT--QLSGSPPRRPTSVLRLASPAGDLPRRPRPRAG 112
+G G + A S R P R + + + ++P + ++ AG R G
Sbjct: 101 RGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNR------G 154
Query: 113 GGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAA 172
G A G +GG K + GA SGK +P+R GA G
Sbjct: 155 AGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGK------KPRR-------RGAKSRGDE 201
Query: 173 APRGWGGQGAERLGVHQPG-LPTHAALRGGGGGSEG-GGGGARPSPPRARQPPSGRPRPR 230
+G + R G + G H + GG++ GGG +P R R +
Sbjct: 202 DKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKS 261
Query: 231 RTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRA 290
R R G L R GQ +AA+ + R RGAAT+ A RGG RG +
Sbjct: 262 RV----GKSRGGGDKKLRRQGQ----NAALAGAKR-RGAATAGEKPAAKGRGG-RGPKSL 311
Query: 291 DGR----ARGGCAQLRAG---TPSAPGGLQDCRGRQGEENA 324
G+ RGG R G T +A G + RG G++ A
Sbjct: 312 GGQNPRWGRGGKKPRRRGQKATKAAAAGTK--RGGGGQQKA 350
Score = 45.4 bits (106), Expect = 8e-05
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 195 HAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLS 254
H G GG+E GGG + + + GR R R R G TG Q S
Sbjct: 88 HWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRR--GQKAAATGSKKPRWRAQKS 145
Query: 255 RPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRA--DGRARGGCAQLRAGTPSAPGGL 312
AA + +RG GA + +AA ++GG + + A ++R G R G S G
Sbjct: 146 ---AAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSR--GD 200
Query: 313 QDCRGRQGE 321
+D +GRQ E
Sbjct: 201 EDKKGRQRE 209
Score = 44.7 bits (104), Expect = 1e-04
Identities = 81/355 (22%), Positives = 125/355 (35%), Gaps = 69/355 (19%)
Query: 2 RTETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLR 61
R + + AG + G+ + S + L + G K A G +S R P++ + +
Sbjct: 476 RQKASAAGTKSRGGGLKSH-SGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVA 534
Query: 62 GAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGG---RHSP 118
GA ++++ GS R+ + + + + R GGG R
Sbjct: 535 GA---------------KSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWG 579
Query: 119 RPAVGTIFRGG---RKGRLREGRGALR---GSGKRRGWGLRPQRVRSRLAGLGAP----- 167
+ A RGG + G + G + G G ++ W R + AG GA
Sbjct: 580 QTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAW-------RQKAAGTGAKSRKKP 632
Query: 168 -----RGGAAAPRGWG-GQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQ 221
+ AAA + W G + G QP AA GSE A AR+
Sbjct: 633 WRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAA-----AGSESSAAAAVGQEAEARK 687
Query: 222 PPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTR 281
P R R ++R G G R G+ R SRG G A S + +R
Sbjct: 688 KP--RRRRAKSRGDGGQNAAVGINPWQRRGKKPR-----LGKSRGGGGAKSRGSGGAKSR 740
Query: 282 GGARGHRRADGRA--------------RGGCAQLRAGTPSAPGGLQDCRGRQGEE 322
G R+ +A RGG A+ R+G + G Q G++
Sbjct: 741 GSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKK 795
Score = 43.1 bits (100), Expect = 4e-04
Identities = 43/136 (31%), Positives = 58/136 (42%), Gaps = 27/136 (19%)
Query: 104 PRRPRPRA-GGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLA 162
PRR R ++ G G + + R G+K RL + RG G K RG G +SR +
Sbjct: 689 PRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGG--GGAKSRGSG----GAKSRGS 742
Query: 163 GLGAPRGG--AAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGG-----GGGARPS 215
G R G AAA + GG GA+R RGGG S G GG + +
Sbjct: 743 GGAKSRSGKKAAASKSHGGGGAKR-------------RRGGGAKSRSGEKAVTAGGQKAA 789
Query: 216 PPRARQPPSGRPRPRR 231
++PP + R R
Sbjct: 790 AAGGKKPPRVKSRGGR 805
Score = 38.5 bits (88), Expect = 0.010
Identities = 69/312 (22%), Positives = 104/312 (33%), Gaps = 54/312 (17%)
Query: 55 KGRGNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPR------ 108
+G G+ +G A RR R + PRR A P G ++PR
Sbjct: 381 RGGGDKKGLREAK------RRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKA 434
Query: 109 -------PRAGGGRHSPRPA---------VGTIFRGGRKGRLREGRGALRGSG-KRRGWG 151
R+GGG+ R G RG +K +GR +G K RG G
Sbjct: 435 AKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKK----QGRQKASAAGTKSRGGG 490
Query: 152 LRPQRVRS--RLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGG-------- 201
L+ ++ R G A G +G ++ +P + + GG
Sbjct: 491 LKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQK 550
Query: 202 ----GGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPH 257
G S GGGG + +P + G ++ G A SR
Sbjct: 551 AVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSG 610
Query: 258 AAVRNSSRGRGAATSVSAAARPTRGGARGHRRAD------GRARG-GCAQLRAGTPSAPG 310
+ + R + A T + +P R G + A+ +RG G Q R P+A G
Sbjct: 611 DGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAG 670
Query: 311 GLQDCRGRQGEE 322
G+E
Sbjct: 671 SESSAAAAVGQE 682
Score = 37.7 bits (86), Expect = 0.017
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 16/171 (9%)
Query: 142 RGSGKRRGWGLRPQRVRSRLAGLGA----------PRGGAAAPRGWGGQGAERLGVHQPG 191
RGSG ++ +P S + A PR A RG GGQ A +G++
Sbjct: 654 RGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAA-VGINPW- 711
Query: 192 LPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHG 251
+ G S GGGG A+ SG + R + +++ H G A R G
Sbjct: 712 --QRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRG 769
Query: 252 QLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLR 302
++ + + + G G + + +P R +RG R A GG LR
Sbjct: 770 GGAKSRSGEKAVTAG-GQKAAAAGGKKPPRVKSRG-GRGQKAAAGGKKPLR 818
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 58.2 bits (139), Expect = 1e-08
Identities = 92/334 (27%), Positives = 120/334 (35%), Gaps = 51/334 (15%)
Query: 38 PHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLA 97
PHT + G RS + G+ +P S + ++LS P+ +
Sbjct: 243 PHTESPGRRS---------HRHSSGSSHSPSLSSHYSDSRSPSRLS---PKHRDEGRKTG 290
Query: 98 SPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRV 157
S R P P G G SP+ G+ R G G GR S + P RV
Sbjct: 291 SQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHG----GRPGSAHSPPDKPSSPSP-RV 345
Query: 158 RSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPP 217
R + A AAAP G P P A G GG GG G R
Sbjct: 346 RDKAA--------AAAPT------PPARGKESPS-PRSAPSSQGRGGRAAGGAGRR---- 386
Query: 218 RARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAA 277
R R R R RR+R SA R GR R + + P + R+ SR R ++ S S
Sbjct: 387 RRR-----RRRRRRSRSSASAPRRRGR----RRPRPAPPRGSSRSLSRARSSSDSGSGRG 437
Query: 278 RPTRGGARGHRRADG----RARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPF 333
P G G R G RA+ + R + S G RG G E RS P
Sbjct: 438 APGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRG--GPEGKSSSRSPGPH 495
Query: 334 SPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLPP 367
+SRS ++ + P P +P P P
Sbjct: 496 PRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKP 529
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 57.4 bits (137), Expect = 2e-08
Identities = 97/346 (28%), Positives = 121/346 (34%), Gaps = 72/346 (20%)
Query: 37 PPHTPATGTRSSYRLLPQKGRGNLRGAP--TAPVSFSRIRRNPLRTQLSGSPPRRPTSVL 94
PP T A G LP G + P T + +R+P+R P RR L
Sbjct: 1891 PPVTQAAGA------LPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPPPL 1944
Query: 95 RLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRP 154
A P P PR G + G RGGR G +R GS G R
Sbjct: 1945 ARAVP------EPGPRGRAGTEA-----GPGARGGRLGLVRVASALSSGSESSDRSGFRR 1993
Query: 155 QR--------VRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPT----HAALRGGG 202
Q +R R + L + A+AP+G + R G +P LP +
Sbjct: 1994 QLTFIKESPGLRRRRSELSSAESAASAPQG----ASPRRG--RPALPAVFLCSSRCEELR 2047
Query: 203 GGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR----PHA 258
G AR PP AR P RP R T S R RA AR + R PH
Sbjct: 2048 AAPRQGPAPARQRPPAARPSPGERPARRTTS--ESPSRLPVRAPAARPETVKRYASLPHI 2105
Query: 259 AVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGR 318
+V + R GA + A+A R + G R R +APG R
Sbjct: 2106 SV--ARRPDGAVPAAPASADAARRSSDGEPRPLPRV------------AAPGTTWR---R 2148
Query: 319 QGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPP 364
+E+ PH RSTL A LPL P A PP
Sbjct: 2149 IRDEDV------------PHILRSTLPATALPLRGSTPEDAPAGPP 2182
Score = 30.0 bits (66), Expect = 3.5
Identities = 39/159 (24%), Positives = 52/159 (32%), Gaps = 19/159 (11%)
Query: 213 RPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATS 272
+P P RQ P+GRP R +A RH +A ++ G+ A
Sbjct: 1418 QPGGPAGRQRPTGRPTSAR------------QAMGHRHKAGGAGRSAEQSRGAGKNRAGL 1465
Query: 273 VSAAARPTRGGARGHRRADGRARG-GCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGA 331
RP A GR RG G Q T + G +E + A
Sbjct: 1466 ELPLGRPPSAPADKDGSKPGRTRGDGALQSLCLTTPTEEAVYCFYGNDSDEEP---PAAA 1522
Query: 332 PFSPHPHAS---RSTLAAQLLPLPQPPPPPKLAPPPLPP 367
P H S R+ + + P P K AP PP
Sbjct: 1523 PTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPP 1561
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 56.6 bits (135), Expect = 3e-08
Identities = 88/320 (27%), Positives = 109/320 (34%), Gaps = 48/320 (15%)
Query: 86 PPRRPTSVLRLASPAGDLPRRP-RPRAGG--GRHSPR--PAVGTIFRGGRKGRLREGRGA 140
PP + LR+ AG + R+P RAGG G P P G G R R
Sbjct: 36 PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPP 95
Query: 141 LRGSGKRR--GWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPG-LPTHAA 197
G G+R P V S G R G +G E + + P +A
Sbjct: 96 ASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSA 155
Query: 198 LRGGGGGSEGGGGGARPSPPRARQP-------------PSGRPRPRRTRLLGSAERHTGR 244
L G G PSP AR+ PS RPRP S
Sbjct: 156 LSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSV------ 209
Query: 245 AALARHGQLSRPHAAVRNSSRGRG----AATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
++ + H AA R S G G A+ S+S++A P AR A G R A
Sbjct: 210 SSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR---AP 266
Query: 301 LRAGTPSAPGGLQDCRGRQ-------GEENAHPFRSGAPFSPHPHASRSTL------AAQ 347
P P GLQ R Q P S +P P +++ AA
Sbjct: 267 AHPSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAAT 325
Query: 348 LLPLPQPPPPPKLAPPPLPP 367
LP PP PP P PL P
Sbjct: 326 PLPATLPPSPPLATPLPLAP 345
Score = 48.1 bits (113), Expect = 1e-05
Identities = 77/297 (25%), Positives = 97/297 (32%), Gaps = 33/297 (11%)
Query: 98 SPAGDLPRRPRPRAGGGRHSPRPAVGTIFR----GGRKGR--LREGRGALRGSGKRRGWG 151
+PA P PR G P P R G GR L E G + G+
Sbjct: 16 TPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES-- 73
Query: 152 LRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEG--GG 209
P+ +R AG + + P G+ A PG P + R G G G
Sbjct: 74 -APRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPG-PVSSPGRASGTTRPGPLGQ 131
Query: 210 GGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGA 269
G R S P+R+ L A R T P A+ SR G
Sbjct: 132 KGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGT------PSPAMARRSRAAGT 185
Query: 270 ATSV-----SAAARP-TRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEEN 323
+ SA RP T G + A + + PSA GGLQ R +
Sbjct: 186 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSS 245
Query: 324 AHPFRS---------GAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLPPWLSA 371
A P S G P +P + Q L PQ PP K A P L P S+
Sbjct: 246 ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302
Score = 35.8 bits (81), Expect = 0.064
Identities = 63/221 (28%), Positives = 78/221 (35%), Gaps = 57/221 (25%)
Query: 6 NLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHT------PATGTRSSYRLLPQKGRGN 59
+LAG + +L +G A PPP PA +R L
Sbjct: 896 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLA------ 949
Query: 60 LRGAPTAPVSFSRIRRNPLRT---QLSGSPPRRPTSVLRLASPA-GDLPRRPRPRAGGGR 115
RGAP AP+ + P T G T A+PA G L P P GG+
Sbjct: 950 FRGAPGAPLPW------PPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 1003
Query: 116 HSPRPAVGTIFRGGRKGRLRE-GRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAP 174
+ G R ++ RL E GAL+ S Q + SR L A G A
Sbjct: 1004 AAAGAGAGASSRSPKQARLGELPLGALQASVV--------QHLLSRTLLLAAAEGAA--- 1052
Query: 175 RGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGG--GGAR 213
GG G GG GG+EGGG GGAR
Sbjct: 1053 ---GGSG------------------GGPGGAEGGGVTGGAR 1072
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 327 FRSGAPFSPHPHASRSTLAAQLLPLPQPPP---PPKLAPPPLPP 367
F APFSP S LA P PQ PP P L PP PP
Sbjct: 807 FPGQAPFSPSASLPMSPLAT---PPPQAPPVLAAPLLQVPPSPP 847
Score = 28.9 bits (63), Expect = 7.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 334 SPHPHASRSTLAAQLLPLPQPPPPPKLAPPP-LPPWLS 370
+P P A + + L LP PP P PPP PP L+
Sbjct: 589 TPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLA 626
>gi|169194607 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 55.1 bits (131), Expect = 1e-07
Identities = 99/357 (27%), Positives = 129/357 (36%), Gaps = 54/357 (15%)
Query: 29 DGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPTA---PVSFSRI-RRNPLRTQLSG 84
+G + A+ PP P+ L+P R AP+A P+S R+ P S
Sbjct: 52 EGARLAEVPPWVPS--------LVPPGSGAAHRRAPSAEALPMSHRPAPRQKPFPVPTSQ 103
Query: 85 SPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGS 144
SP SV+ +PAG R P PRA H+P ++ +I G + R R R
Sbjct: 104 SP-----SVVS-DTPAGVFVRAPSPRAKAHAHAPTHSLLSI-PGAKTSRSRCSPSPGRSR 156
Query: 145 GKRRGWGLRPQRVRSRLAGL-GAPRGGAAAPRGWGGQGAERLGVHQP----GLPTHAALR 199
RR Q V L G+ GA G +G R + P +P A R
Sbjct: 157 LARRPLAHLIQAV-DFLGGIHDFSATGALGVHDRGSRGRRRRRLLAPRSRCDIPRRAPHR 215
Query: 200 GGGGGSEGGGGGA-----RPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLS 254
GG GGG R + RAR S P PRR R G R R +A + +
Sbjct: 216 LLAGGRAAGGGRRVGSRRRATVTRARPSRSLAPPPRRRRRAGQTHRR-ARTEVAGNVHVG 274
Query: 255 RPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQD 314
P R + G GA ++A R GC G AP LQ
Sbjct: 275 HPG---REGAAGEGAGRDPESSA----------------DRRGCDCAAWGVSLAPPPLQ- 314
Query: 315 CRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLPPWLSA 371
G + HP + P + R A L L QP P AP P +SA
Sbjct: 315 -AGEPSRGHPHPRLTDVPGTQMSRGVRGQGAPSL--LLQPVKPGTAAPSPRAEAVSA 368
>gi|169201944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 55.1 bits (131), Expect = 1e-07
Identities = 99/357 (27%), Positives = 129/357 (36%), Gaps = 54/357 (15%)
Query: 29 DGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPTA---PVSFSRI-RRNPLRTQLSG 84
+G + A+ PP P+ L+P R AP+A P+S R+ P S
Sbjct: 52 EGARLAEVPPWVPS--------LVPPGSGAAHRRAPSAEALPMSHRPAPRQKPFPVPTSQ 103
Query: 85 SPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGS 144
SP SV+ +PAG R P PRA H+P ++ +I G + R R R
Sbjct: 104 SP-----SVVS-DTPAGVFVRAPSPRAKAHAHAPTHSLLSI-PGAKTSRSRCSPSPGRSR 156
Query: 145 GKRRGWGLRPQRVRSRLAGL-GAPRGGAAAPRGWGGQGAERLGVHQP----GLPTHAALR 199
RR Q V L G+ GA G +G R + P +P A R
Sbjct: 157 LARRPLAHLIQAV-DFLGGIHDFSATGALGVHDRGSRGRRRRRLLAPRSRCDIPRRAPHR 215
Query: 200 GGGGGSEGGGGGA-----RPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLS 254
GG GGG R + RAR S P PRR R G R R +A + +
Sbjct: 216 LLAGGRAAGGGRRVGSRRRATVTRARPSRSLAPPPRRRRRAGQTHRR-ARTEVAGNVHVG 274
Query: 255 RPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQD 314
P R + G GA ++A R GC G AP LQ
Sbjct: 275 HPG---REGAAGEGAGRDPESSA----------------DRRGCDCAAWGVSLAPPPLQ- 314
Query: 315 CRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLPPWLSA 371
G + HP + P + R A L L QP P AP P +SA
Sbjct: 315 -AGEPSRGHPHPRLTDVPGTQMSRGVRGQGAPSL--LLQPVKPGTAAPSPRAEAVSA 368
>gi|169192119 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 55.1 bits (131), Expect = 1e-07
Identities = 99/357 (27%), Positives = 129/357 (36%), Gaps = 54/357 (15%)
Query: 29 DGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPTA---PVSFSRI-RRNPLRTQLSG 84
+G + A+ PP P+ L+P R AP+A P+S R+ P S
Sbjct: 52 EGARLAEVPPWVPS--------LVPPGSGAAHRRAPSAEALPMSHRPAPRQKPFPVPTSQ 103
Query: 85 SPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGS 144
SP SV+ +PAG R P PRA H+P ++ +I G + R R R
Sbjct: 104 SP-----SVVS-DTPAGVFVRAPSPRAKAHAHAPTHSLLSI-PGAKTSRSRCSPSPGRSR 156
Query: 145 GKRRGWGLRPQRVRSRLAGL-GAPRGGAAAPRGWGGQGAERLGVHQP----GLPTHAALR 199
RR Q V L G+ GA G +G R + P +P A R
Sbjct: 157 LARRPLAHLIQAV-DFLGGIHDFSATGALGVHDRGSRGRRRRRLLAPRSRCDIPRRAPHR 215
Query: 200 GGGGGSEGGGGGA-----RPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLS 254
GG GGG R + RAR S P PRR R G R R +A + +
Sbjct: 216 LLAGGRAAGGGRRVGSRRRATVTRARPSRSLAPPPRRRRRAGQTHRR-ARTEVAGNVHVG 274
Query: 255 RPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQD 314
P R + G GA ++A R GC G AP LQ
Sbjct: 275 HPG---REGAAGEGAGRDPESSA----------------DRRGCDCAAWGVSLAPPPLQ- 314
Query: 315 CRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLPPWLSA 371
G + HP + P + R A L L QP P AP P +SA
Sbjct: 315 -AGEPSRGHPHPRLTDVPGTQMSRGVRGQGAPSL--LLQPVKPGTAAPSPRAEAVSA 368
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 54.3 bits (129), Expect = 2e-07
Identities = 109/390 (27%), Positives = 139/390 (35%), Gaps = 81/390 (20%)
Query: 8 AGDRGAEPGVANQLSHRILPQD---GIKRAQPPPHTP--ATGTRSSYRLLPQKGRGNLRG 62
AG+RGA PG +P + +R P P P A G + G + G
Sbjct: 482 AGERGA-PGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPG 540
Query: 63 APTAPVSFSRIRRNPLRTQ-LSGSP-------PRRPTSVLRLASPAGDL----------- 103
+P P S + P +Q SG P PR V+ P G+
Sbjct: 541 SPGGPGSDGK--PGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGG 598
Query: 104 PRRPRPRAGGGRHS---PRPAVGTIFRGGRKGRLR----EGRGALRGSGKRRGWGLRPQR 156
P P P+ G++ P+ G GG KG +G L G+G G +P
Sbjct: 599 PGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKP-- 656
Query: 157 VRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQ--PGLPTHAALRGGGG--GSEGGGGGA 212
G P+G A AP GG+G + PGL LRGG G G EGG G A
Sbjct: 657 ------GEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAA 710
Query: 213 -RPSPPRARQPPSGRPRPRRTRLLGS--------------AERHTGR-AALARHGQLSRP 256
P PP A P + P LGS A+ G+ G + P
Sbjct: 711 GPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPP 770
Query: 257 HAAVRNSSRGRGAATSVSAAARPTRG--GARGHRRADGRARGGCAQLRAGTPSAPG---- 310
A + +G G A + A P RG G RG G AG P APG
Sbjct: 771 GPAGQPGDKGEGGAPGLPGIAGP-RGSPGERGETGPPG---------PAGFPGAPGQNGE 820
Query: 311 -GLQDCRGRQGE--ENAHPFRSGAPFSPHP 337
G + RG GE E P +G P P
Sbjct: 821 PGGKGERGAPGEKGEGGPPGVAGPPGGSGP 850
Score = 47.8 bits (112), Expect = 2e-05
Identities = 74/277 (26%), Positives = 96/277 (34%), Gaps = 23/277 (8%)
Query: 107 PRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGA 166
P P G G P G G +G E RG L G + G + G
Sbjct: 701 PGPEGGKGAAGPPGPPGAAGTPGLQGMPGE-RGGLGSPGPKGDKGEPGGPGADGVPGKDG 759
Query: 167 PRG--GAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPS 224
PRG G P G GQ ++ PGLP A RG G G G P+ +
Sbjct: 760 PRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPG-ERGETGPPGPAGFPGAPGQN 818
Query: 225 GRPRPRRTRLLGSAERHTGRAALARHGQLSRPHA--------AVRNSSRGRGAATSVSAA 276
G P + R + G +A S P R S G GAA A
Sbjct: 819 GEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGAR 878
Query: 277 ARPTRGGARGHRRADGRARG-------GCAQLRAGTPSAPG--GLQDCRGRQGEENAHPF 327
P G+ G+ G + G A G P +PG G + G+ GE+ + P
Sbjct: 879 GLPGPPGSNGNPGPPGPSGSPGKDGPPGPAG-NTGAPGSPGVSGPKGDAGQPGEKGS-PG 936
Query: 328 RSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPP 364
G P +P P A+ L P P P+ +P P
Sbjct: 937 AQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGP 973
Score = 45.4 bits (106), Expect = 8e-05
Identities = 73/274 (26%), Positives = 85/274 (31%), Gaps = 45/274 (16%)
Query: 81 QLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGA 140
Q S P P + + PAG RP G R P P G KG G
Sbjct: 208 QAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPP-------GIKGPA--GIPG 258
Query: 141 LRGSGKRRGW-GLRPQRVRSRLAGLGAPRG-----GAAAPRGWGGQGAERLGVHQPGLPT 194
G RG+ G ++ + GL G GA P G G ER +PGLP
Sbjct: 259 FPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGER---GRPGLPG 315
Query: 195 HAALRGGGGGSEGGGGGARPSPPRARQPP-----SGRPRPRRTRLLGSAERHTGRAALAR 249
A RG G G P PP P G P + A G
Sbjct: 316 AAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQG 375
Query: 250 HGQLSRPHA--AVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPS 307
H P + S G+G P GARG AG
Sbjct: 376 HAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGP------------AGANG 423
Query: 308 APGGLQDCRGRQGEENAHPFRSGAPFSPHPHASR 341
APG RG GE P ++GA P P R
Sbjct: 424 APG----LRGGAGE----PGKNGAKGEPGPRGER 449
Score = 41.6 bits (96), Expect = 0.001
Identities = 71/248 (28%), Positives = 87/248 (35%), Gaps = 35/248 (14%)
Query: 8 AGDRGA--EPGVANQLSHRILP-QDGIKRAQPPPHTPA----TGTRSSYRLLPQKGRGNL 60
AG+ GA PGV+ P + G AQ PP P G + L G
Sbjct: 908 AGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGP 967
Query: 61 RGAPTAPVSFSRIRRNPLRTQLSGSP-PRRPTSVLRLASPAGDLPRRPRPRAGG------ 113
RG+P P P LSG P P + LA AG+ R P + G
Sbjct: 968 RGSP-GPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDG 1026
Query: 114 --------GRHSPRPAVGTIFRGGRKGRLRE-GRGALRGSGKRRGWGLRPQRVRSRLAGL 164
G + A G G G + G+ RG G P SR
Sbjct: 1027 SPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSR---- 1082
Query: 165 GAPRGGAAAPRGWGGQGAER--LGVH-QPGLPTHAALRGGGG--GSEGGGGGARPSPPRA 219
GAP G PRG G+ ER G+ G P + G G G +G G P+ PR
Sbjct: 1083 GAP--GPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRG 1140
Query: 220 RQPPSGRP 227
PSG P
Sbjct: 1141 PVGPSGPP 1148
Score = 36.2 bits (82), Expect = 0.049
Identities = 65/239 (27%), Positives = 73/239 (30%), Gaps = 50/239 (20%)
Query: 161 LAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRAR 220
LAG P G P G G PG P +G G G P PP A
Sbjct: 169 LAGYPGPAGPPGPPGPPGTSG-------HPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAI 221
Query: 221 QP--------PSGRP-RPRRTRLLG--------------SAERHTG-RAALARHGQLSRP 256
P SGRP RP L G + H G G+ P
Sbjct: 222 GPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAP 281
Query: 257 HAAVRNSSRGRGAAT-------SVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAP 309
N G A + RP GA G R DG ARG Q G P P
Sbjct: 282 GLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDG-ARGSDGQ--PGPPGPP 338
Query: 310 G--GLQDCRGRQGEEN--AHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPP 364
G G G +GE P +GAP + AQ PP PP + P
Sbjct: 339 GTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQ-----GPPGPPGINGSP 392
Score = 32.0 bits (71), Expect = 0.92
Identities = 69/270 (25%), Positives = 83/270 (30%), Gaps = 37/270 (13%)
Query: 110 RAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRG 169
R G+ P GT G G E G G G R + AG P G
Sbjct: 326 RGSDGQPGPPGPPGTAGFPGSPGAKGEV-GPAGSPGSNGAPGQRGEPGPQGHAGAQGPPG 384
Query: 170 GAAAPRGWGGQGAERLGVHQPGLPTHAALRG--------------GGGGSEGGGGGARPS 215
GG+G E PG P RG GG G G G
Sbjct: 385 PPGINGSPGGKG-EMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEP 443
Query: 216 PPRARQPPSGRPRPRRTRLLGSAERHTGR-AALARHGQLSRPHAAVRNSSRG-RGAATSV 273
PR + +G P + A+ G+ + G P AA + G RG A
Sbjct: 444 GPRGERGEAGIPG------VPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPA--- 494
Query: 274 SAAARPTRGGARGHRRADGRA--RGGCAQL-RAGTPSAPG--GLQDCRGRQGEEN----- 323
P G G R A G A RG + R G P PG G+ G G +
Sbjct: 495 GPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPP 554
Query: 324 AHPFRSGAPFSPHPHASRSTLAAQLLPLPQ 353
SG P P P R P P+
Sbjct: 555 GSQGESGRPGPPGPSGPRGQPGVMGFPGPK 584
Score = 32.0 bits (71), Expect = 0.92
Identities = 88/354 (24%), Positives = 111/354 (31%), Gaps = 85/354 (24%)
Query: 29 DGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRNPLRTQLSGSP-P 87
+G K A PP P + +P + RG L G+P P P + G P
Sbjct: 704 EGGKGAAGPPGPPGAAGTPGLQGMPGE-RGGL-GSP-GPKGDKGEPGGPGADGVPGKDGP 760
Query: 88 RRPTSVLRLASPAGD-----------LPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLRE 136
R PT + PAG LP PR G G G G+ E
Sbjct: 761 RGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGE 820
Query: 137 --GRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGA--AAPRGWGGQGAERLGVHQPGL 192
G+G RG+ +G G P G+ P GG+ A P G G ER PG
Sbjct: 821 PGGKGE-RGAPGEKGEGGPP--------GVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA 871
Query: 193 PTHAALRG--------------GGGGSEG--------GGGGARPSP-------------- 216
RG G GS G G GA SP
Sbjct: 872 AGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGE 931
Query: 217 ---PRARQPPSGRPRPRRTRLLGSAERHTGRAALAR----------HGQLSRPHAAVRNS 263
P A+ PP G P P + A G + G+ +P A +
Sbjct: 932 KGSPGAQGPP-GAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSG 990
Query: 264 SRGR-------GAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPG 310
RG G A + R G+ G DG G + G+P APG
Sbjct: 991 ERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPG 1044
Score = 31.2 bits (69), Expect = 1.6
Identities = 37/131 (28%), Positives = 43/131 (32%), Gaps = 4/131 (3%)
Query: 97 ASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQR 156
A PAG P R G PR G G G ++ RG G G Q+
Sbjct: 1070 AGPAG-APGPAGSRGAPGPQGPRGDKGETGERGAAG-IKGHRGFPGNPGAPGSPGPAGQQ 1127
Query: 157 VRSRLAGLGAPRG--GAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARP 214
G PRG G + P G G + PG + RG G G P
Sbjct: 1128 GAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPP 1187
Query: 215 SPPRARQPPSG 225
PP A P G
Sbjct: 1188 GPPGAPGPCCG 1198
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 54.3 bits (129), Expect = 2e-07
Identities = 76/296 (25%), Positives = 105/296 (35%), Gaps = 59/296 (19%)
Query: 40 TPATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRN------PLRTQLSGSPPRRPTSV 93
TPAT + LL +GR R A R P + + S PRR S
Sbjct: 73 TPAT----ALLLLSHRGRAQRRSIQAAAAQEQSTGRGCLGKEPPSQESWTRSDPRRCLSQ 128
Query: 94 LRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLR 153
+ S + RP+ R GGG+ R + A+ G+ R G G +
Sbjct: 129 DAVRSGSRVCRSRPQTRGGGGKQP-----------------RRQKAAVAGAKSRGGEGKK 171
Query: 154 PQRVRSRLAGLGA-PRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSE------ 206
PQR + A GA RGG R GG+ R G A + GGG +
Sbjct: 172 PQRRGQKAATAGAKSRGGGV--RSLGGKKMRR------GQKGAAGAKRCGGGKQPRRRGQ 223
Query: 207 --GGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALA-----------RHGQL 253
GG R P+ + G ++ R G G+ A A R G
Sbjct: 224 KASKSGGVRCQTPQ-KAAAQGVKSRKKLRQRGQKAAAAGQEAAAGKTCGGGGEKHRGGGD 282
Query: 254 SRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAP 309
+P +R +SR RG + + +P + A G R R A RA +P P
Sbjct: 283 KKP---LRKNSRWRGQKAAAAGGKKPQKAAAAGGERRKKLRRQKAAVARAKSPKKP 335
>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 52.4 bits (124), Expect = 7e-07
Identities = 85/282 (30%), Positives = 103/282 (36%), Gaps = 54/282 (19%)
Query: 107 PRPRAGGGRHSPRPAVGTIFRG-GRKGRL-----REG--RGALRGSGKRRGWGLRPQRVR 158
P PRA GR + PA G+ RG G++GRL R G R L GSG RR WG+ R
Sbjct: 122 PPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSG-RRWWGVGEAR-- 178
Query: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
G +A PR W E LG +P P RGG GG G A S R
Sbjct: 179 ---------EGRSAPPRDW----PEPLGELRPSAP-----RGGKGGPRAGVVAA--SWAR 218
Query: 219 ARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAAR 278
P GRP P L + A+ H Q + +R +A
Sbjct: 219 DSGPGVGRPVP---DLEVAVINGPQPLAICLHVQSPNDQETLETLAR---LPELPAAELT 272
Query: 279 PTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPH 338
RGG G R R RG + R + + P G N+ R P P P+
Sbjct: 273 GHRGGGCGPGR---RVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPY 329
Query: 339 ASRSTLAAQLL--------PLPQPPPPPKL------APPPLP 366
LA+ PL P PP L A PP P
Sbjct: 330 PKLPPLASSQYQNVATAWGPLNSPGGPPSLSQGYPHAHPPEP 371
Score = 35.8 bits (81), Expect = 0.064
Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 222 PPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTR 281
P SG PR +R L AE RAA R QL P + + RGRG +SAA R
Sbjct: 105 PDSGPPRQQR--LNKVAEVPPPRAAHGRGTQLPAPGSGL----RGRGQRGRLSAATW-RR 157
Query: 282 GGARGHRRADGRARGGCAQLRAGTPSAP 309
G AR GR G + R G + P
Sbjct: 158 GPARAELAGSGRRWWGVGEAREGRSAPP 185
Score = 28.9 bits (63), Expect = 7.8
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 29/118 (24%)
Query: 25 ILPQDGIKRAQ--------PPPHTP-ATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRR 75
+LP G R Q PPP GT+ LP G G +S + RR
Sbjct: 103 VLPDSGPPRQQRLNKVAEVPPPRAAHGRGTQ-----LPAPGSGLRGRGQRGRLSAATWRR 157
Query: 76 NPLRTQLSGSPPR----------RPTSVLRLASPAGDL-PRRPRPRAGGGRHSPRPAV 122
P R +L+GS R R P G+L P PR GG+ PR V
Sbjct: 158 GPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPR----GGKGGPRAGV 211
>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
sapiens]
Length = 386
Score = 52.4 bits (124), Expect = 7e-07
Identities = 85/282 (30%), Positives = 103/282 (36%), Gaps = 54/282 (19%)
Query: 107 PRPRAGGGRHSPRPAVGTIFRG-GRKGRL-----REG--RGALRGSGKRRGWGLRPQRVR 158
P PRA GR + PA G+ RG G++GRL R G R L GSG RR WG+ R
Sbjct: 122 PPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSG-RRWWGVGEAR-- 178
Query: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
G +A PR W E LG +P P RGG GG G A S R
Sbjct: 179 ---------EGRSAPPRDW----PEPLGELRPSAP-----RGGKGGPRAGVVAA--SWAR 218
Query: 219 ARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAAR 278
P GRP P L + A+ H Q + +R +A
Sbjct: 219 DSGPGVGRPVP---DLEVAVINGPQPLAICLHVQSPNDQETLETLAR---LPELPAAELT 272
Query: 279 PTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPH 338
RGG G R R RG + R + + P G N+ R P P P+
Sbjct: 273 GHRGGGCGPGR---RVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPY 329
Query: 339 ASRSTLAAQLL--------PLPQPPPPPKL------APPPLP 366
LA+ PL P PP L A PP P
Sbjct: 330 PKLPPLASSQYQNVATAWGPLNSPGGPPSLSQGYPHAHPPEP 371
Score = 35.8 bits (81), Expect = 0.064
Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 222 PPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTR 281
P SG PR +R L AE RAA R QL P + + RGRG +SAA R
Sbjct: 105 PDSGPPRQQR--LNKVAEVPPPRAAHGRGTQLPAPGSGL----RGRGQRGRLSAATW-RR 157
Query: 282 GGARGHRRADGRARGGCAQLRAGTPSAP 309
G AR GR G + R G + P
Sbjct: 158 GPARAELAGSGRRWWGVGEAREGRSAPP 185
Score = 28.9 bits (63), Expect = 7.8
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 29/118 (24%)
Query: 25 ILPQDGIKRAQ--------PPPHTP-ATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRR 75
+LP G R Q PPP GT+ LP G G +S + RR
Sbjct: 103 VLPDSGPPRQQRLNKVAEVPPPRAAHGRGTQ-----LPAPGSGLRGRGQRGRLSAATWRR 157
Query: 76 NPLRTQLSGSPPR----------RPTSVLRLASPAGDL-PRRPRPRAGGGRHSPRPAV 122
P R +L+GS R R P G+L P PR GG+ PR V
Sbjct: 158 GPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPR----GGKGGPRAGV 211
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 52.4 bits (124), Expect = 7e-07
Identities = 36/80 (45%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 101 GDLPRRP-RPRAGGGRHSPRP-AVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVR 158
G RRP R R GG RHS RP A + RGG G +G G RG G+ RG+ + R
Sbjct: 9 GGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDG-GGRRGRGRGRGF----RGAR 63
Query: 159 SRLAGLGAPRGGAAAPRGWG 178
G GAPRG P GWG
Sbjct: 64 GGRGGGGAPRGSRREPGGWG 83
Score = 34.7 bits (78), Expect = 0.14
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 168 RGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGAR 213
RGG G G G +R +PG A RGGGGG G GGG R
Sbjct: 8 RGGRGRRPGRGRPGGDRHS-ERPGAAA-AVARGGGGGGGGDGGGRR 51
Score = 33.9 bits (76), Expect = 0.24
Identities = 32/88 (36%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 138 RGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAA 197
RGA G G+R G G RP R P AA RG GG G G + G
Sbjct: 5 RGARGGRGRRPGRG-RPGGDRHS----ERPGAAAAVARGGGGGGGGDGGGRR-GRGRGRG 58
Query: 198 LRGGGGGSEGGGGGARPSPPRARQPPSG 225
RG GG GGG +P +R+ P G
Sbjct: 59 FRGARGGRGGGG-----APRGSRREPGG 81
Score = 31.2 bits (69), Expect = 1.6
Identities = 31/94 (32%), Positives = 36/94 (38%), Gaps = 23/94 (24%)
Query: 218 RARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAA 277
R R+P GRP +RH+ R A AAV +RG G
Sbjct: 11 RGRRPGRGRP---------GGDRHSERPGAA---------AAV---ARGGGGGGGGDGGG 49
Query: 278 RPTRGGARGHRRADGRARGGCAQLRAGTPSAPGG 311
R RG RG R A G GG A G+ PGG
Sbjct: 50 RRGRGRGRGFRGARGGRGGGGAP--RGSRREPGG 81
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 52.0 bits (123), Expect = 9e-07
Identities = 79/300 (26%), Positives = 103/300 (34%), Gaps = 56/300 (18%)
Query: 73 IRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKG 132
I + T L+ R RLA G R PRA R +PA G +
Sbjct: 359 IHKPSSHTSLANQGARSEERGARLAESRG---RGVTPRASWSR---QPAGGPL------- 405
Query: 133 RLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGL 192
G L +R G GL R R G+ A GG RG G G + +G
Sbjct: 406 ---SSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVG------ 456
Query: 193 PTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQ 252
AA+ G G G G P + R+ A++ R L +H +
Sbjct: 457 --RAAVTGEAGAGAAGRGAQSVRGPGVER-----------RVAEGAQQFGPRVGLRQHAE 503
Query: 253 LSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRAR---GGCAQLRAGTPSAP 309
R A R ++ GRG GA+ HRR G+ + G Q G A
Sbjct: 504 --RVERAQR-AAEGRGGGGGGGC-------GAQAHRRVVGQGQVRWEGVGQAARGRRMAH 553
Query: 310 GGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP-PPKLAPPPLPPW 368
Q GR + P R PH H + +P PPP PP L LPP+
Sbjct: 554 HCSQ---GRNSQSRHQPGRD----RPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPF 606
>gi|239749709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 51.6 bits (122), Expect = 1e-06
Identities = 54/170 (31%), Positives = 69/170 (40%), Gaps = 24/170 (14%)
Query: 162 AGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQ 221
+GLG G APR G A +G+ G+ + R GGG+E PRA++
Sbjct: 14 SGLG---GSGGAPRVRGRGTAVGVGI---GVRVWRSRRAEGGGAEAAAARTAGGEPRAQR 67
Query: 222 PPS-------GRPR-------PRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGR 267
GRP P+ RL A+ G+ + Q SRPHA R
Sbjct: 68 QAGSQADEEGGRPERVNHGQVPQGERLRAMAKGGVGKGSQGAERQASRPHAEHRLGLSHL 127
Query: 268 GAATSVSAAARPTRGGARGHRRADGRARGGCAQL-RAGTPSAPGGLQDCR 316
A AA R R GA R G R G A+L RAG P+AP + R
Sbjct: 128 TRAAGAGAARR--RAGAARTRSPKG-CRAGAARLERAGGPAAPARVPPAR 174
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 51.6 bits (122), Expect = 1e-06
Identities = 54/165 (32%), Positives = 63/165 (38%), Gaps = 17/165 (10%)
Query: 163 GLGAPRGGAAAPRGWGGQGAERL---GVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRA 219
G+G G AA G A R G+ + G A RGGG G EGGG GAR + A
Sbjct: 23 GVGKSAGAAAGEEGGARLQATRTWPAGILEGG--PQVAARGGGRGWEGGGLGARRAVTAA 80
Query: 220 RQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR-PHAAVRNSSRGRGAATSVSAAAR 278
R+ GR R R+ L S R + A SR P + GR AA A A
Sbjct: 81 RRGEWGRARESRSAALASP-----RVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAE 135
Query: 279 PTR------GGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRG 317
P R G G R+ A G R P P G G
Sbjct: 136 PPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
Score = 34.7 bits (78), Expect = 0.14
Identities = 51/152 (33%), Positives = 57/152 (37%), Gaps = 38/152 (25%)
Query: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVR 158
PAG L P+ A GG G + GG G R A RG WG +
Sbjct: 47 PAGILEGGPQVAARGG--------GRGWEGGGLGARRAVTAARRGE-----WGRARE--- 90
Query: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
SR A L +PR A PGL A R G + GGGGAR PPR
Sbjct: 91 SRSAALASPRVSNAPTTP---------ASRNPGL--RAQERQSGRRAA-GGGGARAEPPR 138
Query: 219 ARQPP------SGRPRPRRTRLLGSAERHTGR 244
PP SG R RR G+ R T R
Sbjct: 139 V--PPCRPAGCSGGNRSRRA--AGAGPRTTRR 166
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 51.6 bits (122), Expect = 1e-06
Identities = 97/392 (24%), Positives = 124/392 (31%), Gaps = 81/392 (20%)
Query: 10 DRGAEPGVANQ-LSHRILPQDGIKRAQPP-------PHTPATGTRSSYRLLPQKGRGNLR 61
D GA+PGVA L + Q PP P PA R++ L+ G G+
Sbjct: 79 DLGADPGVATTPLGPEHMAQASTLGLSPPSQAFPAHPEAPAAAARAA-ALVAHPGAGSY- 136
Query: 62 GAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPA 121
P SG+ P P PA LP P P P P
Sbjct: 137 ---------------PCGGGSSGAQPSAPPP------PAPPLPPTPSPPP-----PPPPP 170
Query: 122 VGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGL--GAPRGGAAAPRGWGG 179
G G G G G R + LR + A GAP GG G
Sbjct: 171 PPPALSGYTT--TNSGGGGSSGKGHSRDFVLRRDLSATAPAAAMHGAPLGGEQR----SG 224
Query: 180 QGAERLGVHQPGLPTHAA-----LRGGGGGSEGGGGGAR-PSPPRARQPPSGRPRPRRTR 233
G+ + P P H+A G G +G GG A P+ P G P P +
Sbjct: 225 TGSPQ----HPAPPPHSAGMFISASGTYAGPDGSGGPALFPALHDTPGAPGGHPHPLNGQ 280
Query: 234 LLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGR 293
+ AA +G+ P A R+ GA + +AAA G +
Sbjct: 281 MRLGLAAAAAAAAAELYGRAEPPFAP-RSGDAHYGAVAAAAAAALHGYGAVNLNLNLAAA 339
Query: 294 ARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPH---ASRSTLAAQLLP 350
A A + PG P + P HPH A+ + L P
Sbjct: 340 A--------AAAAAGPGPHLQHHAPPPAPPPPPAPAQHPHQHHPHLPGAAGAFLRYMRQP 391
Query: 351 LPQ---------------PPPPPKLAPPPLPP 367
+ Q PPPPP PPP PP
Sbjct: 392 IKQELICKWIDPDELAGLPPPPPPPPPPPPPP 423
Score = 42.0 bits (97), Expect = 9e-04
Identities = 52/169 (30%), Positives = 60/169 (35%), Gaps = 28/169 (16%)
Query: 216 PPRARQPPSGRPRPRRTRLLGSAERHTGRAALA---RHGQLSRP--HAAVRNSSRGRGAA 270
P R PP+ R T + + TG ALA H QL H +R+ G A
Sbjct: 28 PLSKRNPPALRLADLATAQVQPLQNMTGFPALAGPPAHSQLRAAVAHLRLRDLGADPGVA 87
Query: 271 TSVSA----AARPTRGGARGHRRADGRARGGCAQLRAGTPSA-PG-GLQDCRGRQGEENA 324
T+ A T G + + A RA A PG G C G G A
Sbjct: 88 TTPLGPEHMAQASTLGLSPPSQAFPAHPEAPAAAARAAALVAHPGAGSYPCGG--GSSGA 145
Query: 325 HPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLPPWLSAVT 373
P P P P P P PPPPP PPP PP LS T
Sbjct: 146 QPSAPPPPAPPLP------------PTPSPPPPP---PPPPPPALSGYT 179
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 50.8 bits (120), Expect = 2e-06
Identities = 67/234 (28%), Positives = 75/234 (32%), Gaps = 52/234 (22%)
Query: 77 PLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLRE 136
P+ +L G PP R P D P P R G R P P G RG R
Sbjct: 661 PVGPRLLGPPPPP-----RGGDPFWDGPGDPM-RGGPMRGGPGPGPGPYHRG------RG 708
Query: 137 GRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGV--HQPGLPT 194
GRG G P G R G P G GG G +G H+P
Sbjct: 709 GRG-----------GNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRP---- 753
Query: 195 HAALRGGGGGSEG-----GGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALAR 249
H GG G S G G GG S R + P G G H G
Sbjct: 754 HEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGG-----GGHRPHEGPGGGIS 808
Query: 250 HGQLSRPHAAVRNSSRGRGAATSVSAAARP------TRGGARGHRRADGRARGG 297
G RPH G G RP + GG+ GHR +G GG
Sbjct: 809 GGSGHRPH-------EGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGG 855
Score = 50.1 bits (118), Expect = 3e-06
Identities = 61/189 (32%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 108 RPRAGGGRHSPRPAVGTIFRGGRKGRLR----EGRGALRGSGKRRGWGLRPQRVRSRLAG 163
R R G G + P P FRG R GR GRG G G G G RP G
Sbjct: 705 RGRGGRGGNEPPPPPPP-FRGARGGRSGGGPPNGRGG-PGGGMVGGGGHRPHE------G 756
Query: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPP 223
G G ++ R G G H+P G GGS GGGGG RP + P
Sbjct: 757 PGGGMGNSSGHRPHEGPGGGMGSGHRP--------HEGPGGSMGGGGGHRP-----HEGP 803
Query: 224 SGRPRPRRTRLLGSAER-HTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRG 282
G GS R H G G RPH S G G P G
Sbjct: 804 GGGISG------GSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEG---PGHG 854
Query: 283 GARGHRRAD 291
G GHR D
Sbjct: 855 GPHGHRPHD 863
Score = 31.6 bits (70), Expect = 1.2
Identities = 49/186 (26%), Positives = 56/186 (30%), Gaps = 27/186 (14%)
Query: 165 GAPRGGAAAPRGWG----GQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRAR 220
G P GG P+G G G G H GG GG G P PPR
Sbjct: 628 GFPPGGPGGPKGMQHFPPGPGGPMPGPH-----------GGPGGPVGPRLLGPPPPPRGG 676
Query: 221 QP-PSGRPRPRRTRLL------GSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSV 273
P G P R + G H GR + + P R + GR
Sbjct: 677 DPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGN-EPPPPPPPFRGARGGRSGGGPP 735
Query: 274 SAAARPTRG--GARGHRRADGRARGGCAQLRAGTP-SAPGGLQDCRGRQGEENAHPFRSG 330
+ P G G GHR +G GG P PGG R E G
Sbjct: 736 NGRGGPGGGMVGGGGHRPHEGPG-GGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGG 794
Query: 331 APFSPH 336
PH
Sbjct: 795 GGHRPH 800
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 50.8 bits (120), Expect = 2e-06
Identities = 74/264 (28%), Positives = 94/264 (35%), Gaps = 37/264 (14%)
Query: 40 TPATGTRSSYRLLP--QKGRGNLRGAPTAPVSFSRIRRN------PLRTQLSGSPPRRPT 91
TPAT LLP +GR R A + R P R + S PR
Sbjct: 73 TPATA------LLPLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRSDPRHCI 126
Query: 92 SVLRLASPAGDLPRRPRPRAGGGRHSPRP---AVGTIFRGGRKGRL-----REGRGALRG 143
S S + RP+ R GGG+ R A G RGG+K R R G+ +
Sbjct: 127 SQDASRSGSRVCRSRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQKSTAA 186
Query: 144 SGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGG 203
K RG G + R + A A A G G + + R G +PG A+ G
Sbjct: 187 GAKSRGEGGKKPRQQKPAA--------AGAKSGLGDKKSRRWGRKKPGRWGQEAVAG--- 235
Query: 204 GSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNS 263
E GGG + A +PRR +AE+ A G + AA R
Sbjct: 236 --ETCGGGGKKPQKAAAPGAKSHKKPRRQWQKAAAEK-VAVAGAESCGGRGQKAAAARAK 292
Query: 264 SRGRGAATSVSAAAR-PTRGGARG 286
S G G R P G RG
Sbjct: 293 SGGFGGKKQRRRGQRAPKSRGGRG 316
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 50.1 bits (118), Expect = 3e-06
Identities = 107/376 (28%), Positives = 126/376 (33%), Gaps = 71/376 (18%)
Query: 39 HTPAT----GTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRNP-LRTQLSGSPPRR---- 89
HTPA TR S L ++ R A + P SR RR RT L G RR
Sbjct: 60 HTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGP---SRQRRTSRARTALWGRRSRRAAGP 116
Query: 90 ----------PTSVLRLASPA-GDLPRRPRPR----AGGGRHS---PRPAVGTIFRGGRK 131
P+ PA RRP + GGGR S PR R R
Sbjct: 117 GLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRASHSGPRAGTPGGGRSSRA 176
Query: 132 GRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAP---------RGGAAAPRGWGGQGA 182
G R+ +L R+G R Q + S G G P GGAA R +G+
Sbjct: 177 GARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQV-RGS 235
Query: 183 ERLGVHQPGLPTHAALRGGGGGSEGGGGGA---RPSPPRARQPPSGR-PRPRRTRLLGSA 238
E+ LP + L G G G GG R S P + + P P R R A
Sbjct: 236 EKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTGARTLPTPSRARPGKPA 295
Query: 239 ERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGC 298
R + A R G + S RG G SV A TR G+R R G R G
Sbjct: 296 PRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPV-GVLR-GV 353
Query: 299 AQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPP 358
R + AP P SP A L A L PQ P
Sbjct: 354 PHFRPLSSPAP-------------------QSPPRSPSVRAFGPRLGAGRLSCPQAPRAA 394
Query: 359 K------LAPPPLPPW 368
LAP P W
Sbjct: 395 ALPGIAVLAPSPAHDW 410
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 50.1 bits (118), Expect = 3e-06
Identities = 88/332 (26%), Positives = 106/332 (31%), Gaps = 59/332 (17%)
Query: 37 PPHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRL 96
P A G RL Q R P AP + R P + +GS +R L
Sbjct: 286 PSAAAAAGRHCPLRLAGQAPRTQ-PACPAAP-RMQQTEREPWGGEGAGSRFKR----LHD 339
Query: 97 ASPAGDLPRR------PRPRAGGGRHSPRPAVGTIFRG--GRKGRLREGRGALRGSGKRR 148
SP + P+ P+AG R AV T R R+G R G +R
Sbjct: 340 ESPRPNFPQSLAEGLGVSPQAGARVGEAREAVTTHERAHLDREGEARARLGQAAAQMRRE 399
Query: 149 GWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG---- 204
GWG R++L G G G P W R PG A L G G
Sbjct: 400 GWG-----ARAKLGGRGVC--GKCGPGPWDDPARRR----NPGAAARAKLAGQRAGRARA 448
Query: 205 ---SEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPH---- 257
S+ G G P R P GR R +G+ ER G AA R ++ P
Sbjct: 449 RTGSQVGSRGRGWGPGAGRVPSGGR------RGVGNPERWGGEAAAPRPSRVLLPELPAV 502
Query: 258 ------------AAVRNSSRGR-----GAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
AA R GR GA S RP
Sbjct: 503 DPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTPPPARA 562
Query: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAP 332
L A SA L+D G + P RSG P
Sbjct: 563 LPAAVASARCSLRDPGGGSARIRSRPGRSGGP 594
Score = 35.4 bits (80), Expect = 0.083
Identities = 78/302 (25%), Positives = 98/302 (32%), Gaps = 62/302 (20%)
Query: 115 RHSPRPAVGTIFRGGRKGRLREGR----GALRGSGKRRGWGLRPQRVRSRLAGLGAPRGG 170
RH R A G G ++G G A +G+ L Q R++ A APR
Sbjct: 262 RHGGRAAAGL---GSQRGAALAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQ 318
Query: 171 AAAPRGWGGQGA----ERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGR 226
WGG+GA +RL P +L G G S G AR+ +
Sbjct: 319 QTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARV----GEAREAVTTH 374
Query: 227 PRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAA--------------TS 272
R R G A G+AA Q+ R R GRG +
Sbjct: 375 ERAHLDR-EGEARARLGQAA----AQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRN 429
Query: 273 VSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPG-GLQDCRGRQGEENAHPFRSGA 331
AAAR G R R RAR G G PG G GR+G N + G
Sbjct: 430 PGAAARAKLAGQRAGR---ARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERW-GGE 485
Query: 332 PFSPHPH-----------------------ASRSTLAAQLLPLPQPPPPPKLAPPPLPPW 368
+P P A R+ L ++ P PP P P P
Sbjct: 486 AAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDS 545
Query: 369 LS 370
LS
Sbjct: 546 LS 547
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 50.1 bits (118), Expect = 3e-06
Identities = 75/278 (26%), Positives = 97/278 (34%), Gaps = 56/278 (20%)
Query: 95 RLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRP 154
RLA G R PRA R +PA G + G L +R G GL
Sbjct: 54 RLAESRG---RGVTPRASWSR---QPAGGPL----------SSEGHLLPLVQRDGGGLAE 97
Query: 155 QRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARP 214
R R G+ A GG RG G G + +G AA+ G G G G
Sbjct: 98 HRGREGEEGVRAGGGGTGEVRGGGSPGRQPVG--------RAAVTGEAGAGAAGRGAQSV 149
Query: 215 SPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVS 274
P + R+ A++ R L +H + R A R ++ GRG
Sbjct: 150 RGPGVER-----------RVAEGAQQFGPRVGLRQHAE--RVERAQR-AAEGRGGGGGGG 195
Query: 275 AAARPTRGGARGHRRADGRAR---GGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGA 331
GA+ HRR G+ + G Q G A Q GR + P R
Sbjct: 196 C-------GAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQ---GRNSQSRHQPGRD-- 243
Query: 332 PFSPHPHASRSTLAAQLLPLPQPPP-PPKLAPPPLPPW 368
PH H + +P PPP PP L LPP+
Sbjct: 244 --RPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPF 279
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 50.1 bits (118), Expect = 3e-06
Identities = 88/332 (26%), Positives = 106/332 (31%), Gaps = 59/332 (17%)
Query: 37 PPHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRL 96
P A G RL Q R P AP + R P + +GS +R L
Sbjct: 286 PSAAAAAGRHCPLRLAGQAPRTQ-PACPAAP-RMQQTEREPWGGEGAGSRFKR----LHD 339
Query: 97 ASPAGDLPRR------PRPRAGGGRHSPRPAVGTIFRG--GRKGRLREGRGALRGSGKRR 148
SP + P+ P+AG R AV T R R+G R G +R
Sbjct: 340 ESPRPNFPQSLAEGLGVSPQAGARVGEAREAVTTHERAHLDREGEARARLGQAAAQMRRE 399
Query: 149 GWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG---- 204
GWG R++L G G G P W R PG A L G G
Sbjct: 400 GWG-----ARAKLGGRGVC--GKCGPGPWDDPARRR----NPGAAARAKLAGQRAGRARA 448
Query: 205 ---SEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPH---- 257
S+ G G P R P GR R +G+ ER G AA R ++ P
Sbjct: 449 RTGSQVGSRGRGWGPGAGRVPSGGR------RGVGNPERWGGEAAAPRPSRVLLPELPAV 502
Query: 258 ------------AAVRNSSRGR-----GAATSVSAAARPTRGGARGHRRADGRARGGCAQ 300
AA R GR GA S RP
Sbjct: 503 DPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTPPPARA 562
Query: 301 LRAGTPSAPGGLQDCRGRQGEENAHPFRSGAP 332
L A SA L+D G + P RSG P
Sbjct: 563 LPAAVASARCSLRDPGGGSARIRSRPGRSGGP 594
Score = 35.4 bits (80), Expect = 0.083
Identities = 78/302 (25%), Positives = 98/302 (32%), Gaps = 62/302 (20%)
Query: 115 RHSPRPAVGTIFRGGRKGRLREGR----GALRGSGKRRGWGLRPQRVRSRLAGLGAPRGG 170
RH R A G G ++G G A +G+ L Q R++ A APR
Sbjct: 262 RHGGRAAAGL---GSQRGAALAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQ 318
Query: 171 AAAPRGWGGQGA----ERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGR 226
WGG+GA +RL P +L G G S G AR+ +
Sbjct: 319 QTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARV----GEAREAVTTH 374
Query: 227 PRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAA--------------TS 272
R R G A G+AA Q+ R R GRG +
Sbjct: 375 ERAHLDR-EGEARARLGQAA----AQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRN 429
Query: 273 VSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPG-GLQDCRGRQGEENAHPFRSGA 331
AAAR G R R RAR G G PG G GR+G N + G
Sbjct: 430 PGAAARAKLAGQRAGR---ARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERW-GGE 485
Query: 332 PFSPHPH-----------------------ASRSTLAAQLLPLPQPPPPPKLAPPPLPPW 368
+P P A R+ L ++ P PP P P P
Sbjct: 486 AAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRPRPDS 545
Query: 369 LS 370
LS
Sbjct: 546 LS 547
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 50.1 bits (118), Expect = 3e-06
Identities = 75/278 (26%), Positives = 97/278 (34%), Gaps = 56/278 (20%)
Query: 95 RLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRP 154
RLA G R PRA R +PA G + G L +R G GL
Sbjct: 54 RLAESRG---RGVTPRASWSR---QPAGGPL----------SSEGHLLPLVQRDGGGLAE 97
Query: 155 QRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARP 214
R R G+ A GG RG G G + +G AA+ G G G G
Sbjct: 98 HRGREGEEGVRAGGGGTGEVRGGGSPGRQPVG--------RAAVTGEAGAGAAGRGAQSV 149
Query: 215 SPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVS 274
P + R+ A++ R L +H + R A R ++ GRG
Sbjct: 150 RGPGVER-----------RVAEGAQQFGPRVGLRQHAE--RVERAQR-AAEGRGGGGGGG 195
Query: 275 AAARPTRGGARGHRRADGRAR---GGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGA 331
GA+ HRR G+ + G Q G A Q GR + P R
Sbjct: 196 C-------GAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQ---GRNSQSRHQPGRD-- 243
Query: 332 PFSPHPHASRSTLAAQLLPLPQPPP-PPKLAPPPLPPW 368
PH H + +P PPP PP L LPP+
Sbjct: 244 --RPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPF 279
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 50.1 bits (118), Expect = 3e-06
Identities = 75/278 (26%), Positives = 97/278 (34%), Gaps = 56/278 (20%)
Query: 95 RLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRP 154
RLA G R PRA R +PA G + G L +R G GL
Sbjct: 54 RLAESRG---RGVTPRASWSR---QPAGGPL----------SSEGHLLPLVQRDGGGLAE 97
Query: 155 QRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARP 214
R R G+ A GG RG G G + +G AA+ G G G G
Sbjct: 98 HRGREGEEGVRAGGGGTGEVRGGGSPGRQPVG--------RAAVTGEAGAGAAGRGAQSV 149
Query: 215 SPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVS 274
P + R+ A++ R L +H + R A R ++ GRG
Sbjct: 150 RGPGVER-----------RVAEGAQQFGPRVGLRQHAE--RVERAQR-AAEGRGGGGGGG 195
Query: 275 AAARPTRGGARGHRRADGRAR---GGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGA 331
GA+ HRR G+ + G Q G A Q GR + P R
Sbjct: 196 C-------GAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQ---GRNSQSRHQPGRD-- 243
Query: 332 PFSPHPHASRSTLAAQLLPLPQPPP-PPKLAPPPLPPW 368
PH H + +P PPP PP L LPP+
Sbjct: 244 --RPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPF 279
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 50.1 bits (118), Expect = 3e-06
Identities = 80/312 (25%), Positives = 104/312 (33%), Gaps = 42/312 (13%)
Query: 69 SFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRG 128
S +R RR S SP RRP S R SP P R P R S P + R
Sbjct: 294 SHTRPRRRHRSRSRSYSPRRRP-SPRRRPSPRRRTPPRRMPPPPRHRRSRSP----VRRR 348
Query: 129 GRKGRLREGRGALRGSGKRRGWGLRPQRVRS-------RLAGLGAP--RGGAAAPRGWGG 179
R G + S + R +P + S RL+ +P R +P
Sbjct: 349 RRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPP 408
Query: 180 QGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAE 239
Q T + R G + R+ PS P+PR+ L S E
Sbjct: 409 PKTRHSPTPQQSNRTRKS-RVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEE 467
Query: 240 RHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTR----GGARGHRRADGRAR 295
G+ A A Q R + S ++S S RP R G G RR +
Sbjct: 468 DKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS- 526
Query: 296 GGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPP 355
R+ +PS R RQ E + R +P P RS P P
Sbjct: 527 ------RSASPSP-------RKRQKETSPRGRRRRSPSPPPTRRRRS---------PSPA 564
Query: 356 PPPKLAPPPLPP 367
PPP+ P PP
Sbjct: 565 PPPRRRRTPTPP 576
Score = 29.6 bits (65), Expect = 4.6
Identities = 63/249 (25%), Positives = 85/249 (34%), Gaps = 54/249 (21%)
Query: 32 KRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPT 91
+R PPP + + R ++ +L G+ ++ S SR R P + S P R T
Sbjct: 330 RRMPPPPRHRRSRSPVRRR---RRSSASLSGSSSSSSS-SRSRSPPKKPPKRTSSPPRKT 385
Query: 92 SVLRLASPAGDLPRR---PRPRAGGG---RHSPRPAVGTIFRGGR----KGRLREGRGAL 141
R SP+ PRR P P A RHSP P R R GR
Sbjct: 386 ---RRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKH 442
Query: 142 RGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAP----------RGWGGQGAERLGVHQPG 191
+G+ KR P+ + L+ +GG A R Q + G
Sbjct: 443 KGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSS 502
Query: 192 ---LPTHAALRGGGGG----------------------SEGGGGGARPSPP--RARQPPS 224
P + ++ G G S G PSPP R R+ PS
Sbjct: 503 EDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS 562
Query: 225 GRPRPRRTR 233
P PRR R
Sbjct: 563 PAPPPRRRR 571
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 49.7 bits (117), Expect = 4e-06
Identities = 91/340 (26%), Positives = 113/340 (33%), Gaps = 75/340 (22%)
Query: 86 PPRRPTSVLRLASPAGDLPRRP-RPRAGG--GRHSPRPAVGTIFRGGRKGRLREGRGALR 142
PP + LR+ AG + R+P RAGG G P A R G R R
Sbjct: 36 PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP-------RAGPTRTSRPPAS 88
Query: 143 GSGKRR--GWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPG-LPTHAALR 199
G G+R P V S G R G +G E + + P +AL
Sbjct: 89 GRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALS 148
Query: 200 GGGGGSEGGGGGARPSPPRARQP-------------PSGRPRPRRTRLLGSAERHTGRAA 246
G G PSP AR+ PS RPRP S ++
Sbjct: 149 AGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSV------SS 202
Query: 247 LARHGQLSRPHAAVRNSSRGRG----AATSVSAAARPTRGGARGHRRADGRARGGCAQLR 302
+ H AA R S G G A+ S+S++A P AR A G R A
Sbjct: 203 ASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR---APAH 259
Query: 303 AGTPSAPGGLQDCRGRQ------------GEENAHPFRSGAPFSP-HPHASRS------- 342
P P GLQ R Q G ++ P + +P +P P A S
Sbjct: 260 PSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSP 318
Query: 343 ---------------TLAAQLLPLPQPPPPPKLAPPPLPP 367
TL A LP PP P PPP P
Sbjct: 319 PATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 358
Score = 47.8 bits (112), Expect = 2e-05
Identities = 96/378 (25%), Positives = 124/378 (32%), Gaps = 80/378 (21%)
Query: 36 PPPHTPAT----GTRSSYRLLPQKGRGNLRGAPTAPVSF-----SRIRRNPLRTQLSGSP 86
PPP TPA G + P R G T P S +R R P + +P
Sbjct: 36 PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAP 95
Query: 87 PRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGK 146
P + TS ++SP G RP G + A T+ RG K R AL +
Sbjct: 96 PAKNTSPGPVSSP-GRASGTTRPGPLGQKGLRISAEETVARG--KATEAPKRSALSAGAR 152
Query: 147 RRGWGLRP------QRVRSRLAG--LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAAL 198
R G P RSR AG +G PR +A +P PT
Sbjct: 153 RDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA---------------RPRPPTEGPR 197
Query: 199 RGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHA 258
+ SE PSP R+P +G G +R R+ + LS P
Sbjct: 198 KSVSSASEHST--TEPSPAARRRPSAG----------GGLQRPASRSLSSSATPLSSP-- 243
Query: 259 AVRNSSRGRGAATSVSAAARPTRGGARGHR-------RADGR-ARGGCAQLRAGTPS--- 307
R+ RG + + ++P G + R R D A G + TPS
Sbjct: 244 -ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSA 302
Query: 308 -----APGGLQDCR--------------GRQGEENAHPFRSGAPFSPHPHASRSTLAAQL 348
AP LQ G + H F P SP A
Sbjct: 303 PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA 362
Query: 349 LPLPQPPPPPKLAPPPLP 366
LP Q PP P +PP P
Sbjct: 363 LPPLQAPPSPPASPPLSP 380
Score = 35.8 bits (81), Expect = 0.064
Identities = 63/221 (28%), Positives = 78/221 (35%), Gaps = 57/221 (25%)
Query: 6 NLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHT------PATGTRSSYRLLPQKGRGN 59
+LAG + +L +G A PPP PA +R L
Sbjct: 588 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLA------ 641
Query: 60 LRGAPTAPVSFSRIRRNPLRT---QLSGSPPRRPTSVLRLASPA-GDLPRRPRPRAGGGR 115
RGAP AP+ + P T G T A+PA G L P P GG+
Sbjct: 642 FRGAPGAPLPW------PPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 695
Query: 116 HSPRPAVGTIFRGGRKGRLRE-GRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAP 174
+ G R ++ RL E GAL+ S Q + SR L A G A
Sbjct: 696 AAAGAGAGASSRSPKQARLGELPLGALQASVV--------QHLLSRTLLLAAAEGAA--- 744
Query: 175 RGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGG--GGAR 213
GG G GG GG+EGGG GGAR
Sbjct: 745 ---GGSG------------------GGPGGAEGGGVTGGAR 764
Score = 31.2 bits (69), Expect = 1.6
Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 300 QLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP--- 356
QL P AP L + F APFSP S LA P PQ PP
Sbjct: 472 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLAT---PPPQAPPVLA 528
Query: 357 PPKLAPPPLPP 367
P L PP PP
Sbjct: 529 APLLQVPPSPP 539
Score = 30.0 bits (66), Expect = 3.5
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 331 APFSPHPHASRSTLAAQLLPLPQPPP--PPKLAPPPL 365
+P + P + LAA L L +PPP PP LA PPL
Sbjct: 453 SPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPL 489
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 49.3 bits (116), Expect = 6e-06
Identities = 75/274 (27%), Positives = 93/274 (33%), Gaps = 35/274 (12%)
Query: 104 PRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLR----------EGRGALRGSGKRRGWGLR 153
P RP R G R GT G KG G +G G
Sbjct: 238 PGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGA 297
Query: 154 PQRVRSRLAGLGAPRGGAAAPRGWGGQGAE-RLGVHQPGLPTHAALRGGGGGSEGGGGGA 212
P ++ R GL RG AP G +G + G P PT A G G+ G G A
Sbjct: 298 PGQMGPR--GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEA 355
Query: 213 RPSPPRARQPPSG-RPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAAT 271
P PR + P G R P G+A G P A + ++G A
Sbjct: 356 GPQGPRGSEGPQGVRGEPGPPGPAGAA------------GPAGNPGADGQPGAKGANGAP 403
Query: 272 SVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGA 331
++ A P GARG G + +G P APG D G +GE P G
Sbjct: 404 GIAGA--PGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGD-TGAKGE----PGPVGV 456
Query: 332 PFSPHPHASRSTLAAQLLPLPQ--PPPPPKLAPP 363
P P A+ P P P PP + P
Sbjct: 457 QGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGP 490
Score = 47.8 bits (112), Expect = 2e-05
Identities = 81/290 (27%), Positives = 99/290 (34%), Gaps = 38/290 (13%)
Query: 74 RRNPLRTQLSGSPPRRPTSVLR-------LASPAGDLPRRPRPRAGGGRHSPRPA--VGT 124
R P T L G P R R +A P G R P G + SP A G
Sbjct: 472 RGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGE 531
Query: 125 IFRGGRKGRLREGRGALRGSGKR-----RGWGLRP-------QRVRSRLAGLGAPRGGAA 172
G KG L G+ GK G RP R ++ + G P+G A
Sbjct: 532 AGLPGAKG-LTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAG 590
Query: 173 APRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRT 232
P G+ ER GV P A + G G++G G A P+ R Q P+G P +
Sbjct: 591 EP----GKAGER-GVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGL 645
Query: 233 RLLGSAERHTGRAA-LARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRAD 291
G+ G L P + RG V P G R A+
Sbjct: 646 PGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPA-----GPRGAN 700
Query: 292 GRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPHASR 341
G A+ AG P APG Q G QG P GA P P R
Sbjct: 701 GAPGNDGAKGDAGAPGAPGS-QGAPGLQG----MPGERGAAGLPGPKGDR 745
Score = 47.8 bits (112), Expect = 2e-05
Identities = 99/388 (25%), Positives = 123/388 (31%), Gaps = 65/388 (16%)
Query: 4 ETNLAGDRGAEPGVANQLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGA 63
E + GD GA PG + R P G + Q PP PA G R + G GA
Sbjct: 660 EQGVPGDLGA-PGPSGARGERGFP--GERGVQGPPG-PA-GPRGANGAPGNDGAKGDAGA 714
Query: 64 PTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVG 123
P AP S L G P R + L P P+ G P+ A G
Sbjct: 715 PGAPGSQGA-------PGLQGMPGERGAAGL------------PGPKGDRGDAGPKGADG 755
Query: 124 TIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAP--RGWGGQG 181
+ + G +G G + G G + S +G P G AP RG G
Sbjct: 756 SPGKDGVRGLT----GPIGPPGPA---GAPGDKGESGPSGPAGPTGARGAPGDRGEPGPP 808
Query: 182 AERLGVHQPGLPTHAALRG--GGGGSEGGGGGARPSPPRARQPPSGR------------- 226
PG +G G G++G G P+ P P G
Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSA 868
Query: 227 PRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARG 286
P T G+A R G P A + G+G A RP G G
Sbjct: 869 GPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEG--GKGPRGETGPAGRPGEVGPPG 926
Query: 287 HRRADGRARGGCAQLRAGTPSAPG--------GLQDCRGRQGEEN--AHPFRSGAPFSPH 336
G A AG P PG G+ G++GE P SG P
Sbjct: 927 PPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQG 986
Query: 337 PHASRSTLAAQLLPLPQPPPPPKLAPPP 364
P + P P PP LA PP
Sbjct: 987 PSGASGERGP-----PGPMGPPGLAGPP 1009
Score = 37.4 bits (85), Expect = 0.022
Identities = 77/296 (26%), Positives = 92/296 (31%), Gaps = 39/296 (13%)
Query: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGW-GLRPQRV 157
P G+ RP G P PA G G +G +RG GL QR
Sbjct: 909 PRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRG 968
Query: 158 RSRLAGLGAPRG--GAAAPRGWGGQGAERLGVHQPGL--PTHAALRGGGGGSEGGGGGAR 213
GL P G G P G G+ + PGL P + R G G+EG G R
Sbjct: 969 ERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPG--R 1026
Query: 214 PSPPRARQ---------PPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSS 264
P A+ PP P +G A + R G A
Sbjct: 1027 DGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGP-----AGPVGPV 1081
Query: 265 RGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPG--------GLQDCR 316
RG A G +G R G Q G P +PG G R
Sbjct: 1082 GARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR 1141
Query: 317 GRQGEENAHPFRSG-----APFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLPP 367
G G A P + G P P R+ A + PP PP PP PP
Sbjct: 1142 GPPGSAGA-PGKDGLNGLPGPIGPPGPRGRTGDAGPV----GPPGPPGPPGPPGPP 1192
Score = 34.7 bits (78), Expect = 0.14
Identities = 69/256 (26%), Positives = 81/256 (31%), Gaps = 29/256 (11%)
Query: 2 RTETNLAGDRG--AEPGVANQLSHRILPQDGIKRAQPPPHTPA----TGTRSSYRLLPQK 55
R ET AG G PG + P G P TP G R L Q+
Sbjct: 910 RGETGPAGRPGEVGPPGPPGPAGEKGSP--GADGPAGAPGTPGPQGIAGQRGVVGLPGQR 967
Query: 56 GRGNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGG-- 113
G G P S ++ P PP P LA P G+ R P A G
Sbjct: 968 GERGFPGLPGP--SGEPGKQGPSGASGERGPPG-PMGPPGLAGPPGESGREGAPGAEGSP 1024
Query: 114 GRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRG---- 169
GR A G G G GA G G R + AG P G
Sbjct: 1025 GRDGSPGAKGDRGETGPAGP-PGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGA 1083
Query: 170 -GAAAPRGWGGQGAERLGVHQPGLPTHAALRG--------GGGGSEGGGGGARPSPPRAR 220
G A P+G G E G+ H G G G +G G + P+ PR
Sbjct: 1084 RGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRG- 1142
Query: 221 QPPSGRPRPRRTRLLG 236
PP P + L G
Sbjct: 1143 -PPGSAGAPGKDGLNG 1157
Score = 34.3 bits (77), Expect = 0.19
Identities = 62/224 (27%), Positives = 71/224 (31%), Gaps = 36/224 (16%)
Query: 163 GLGAPRG--GAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRAR 220
GL P G G P G GG A +L T GG S G G PS PR
Sbjct: 139 GLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKST-------GGISVPGPMG--PSGPRGL 189
Query: 221 QPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRG-------------- 266
P G P P+ + G A G P +N G
Sbjct: 190 PGPPGAPGPQGFQ--GPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPP 247
Query: 267 --RGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPG--GLQDCRGRQGEE 322
+GA A P G RG DG A+G AG PG G G+ G
Sbjct: 248 GPQGARGLPGTAGLPGMKGHRGFSGLDG-AKGDAGP--AGPKGEPGSPGENGAPGQMGPR 304
Query: 323 NAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPPPPKLAPPPLP 366
P G P +P P +R A P P P PP P
Sbjct: 305 GL-PGERGRPGAPGPAGARGNDGATGAAGP-PGPTGPAGPPGFP 346
Score = 32.0 bits (71), Expect = 0.92
Identities = 62/241 (25%), Positives = 72/241 (29%), Gaps = 34/241 (14%)
Query: 97 ASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQR 156
A P G + P A G R S P T F G GR G G
Sbjct: 847 AGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAA------GRVGPPGPSGNAG------- 893
Query: 157 VRSRLAGLGAPRG--GAAAPRGWGGQGAERLGVHQPGLPTHAALRG--GGGGSEGGGGGA 212
G P G G PRG G V PG P A +G G G G G
Sbjct: 894 ----PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTP 949
Query: 213 RPSPPRARQPPSGRPRPRRTR----LLGSAERHTGRAALARHGQLSRPH-------AAVR 261
P ++ G P R R L G + + G+ P A
Sbjct: 950 GPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPP 1009
Query: 262 NSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPS--APGGLQDCRGRQ 319
S GA + + R GA+G R G A A G P P G RG
Sbjct: 1010 GESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGET 1069
Query: 320 G 320
G
Sbjct: 1070 G 1070
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,331,386
Number of Sequences: 37866
Number of extensions: 1550500
Number of successful extensions: 29241
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 1522
Number of HSP's that attempted gapping in prelim test: 15730
Number of HSP's gapped (non-prelim): 9940
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.