Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 116812573
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116812573 CWC15 homolog [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116812573 CWC15 homolog [Homo sapiens] 459 e-130
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 58 8e-09
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 50 2e-06
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 49 5e-06
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 49 5e-06
gi|221219020 NYD-SP11 protein [Homo sapiens] 48 8e-06
gi|21314720 Smad nuclear interacting protein [Homo sapiens] 45 7e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 45 7e-05
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 45 7e-05
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 44 9e-05
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 44 9e-05
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 44 1e-04
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 44 2e-04
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 44 2e-04
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 43 3e-04
gi|12711674 UPF3 regulator of nonsense transcripts homolog B iso... 42 3e-04
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 42 6e-04
gi|56549694 enabled homolog isoform a [Homo sapiens] 41 7e-04
gi|39930375 enabled homolog isoform b [Homo sapiens] 41 7e-04
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 41 7e-04
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 41 7e-04
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 41 7e-04
gi|17975763 myelin transcription factor 1 [Homo sapiens] 41 0.001
gi|148746195 trichohyalin [Homo sapiens] 41 0.001
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 41 0.001
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 41 0.001
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 41 0.001
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 41 0.001
>gi|116812573 CWC15 homolog [Homo sapiens]
Length = 229
Score = 459 bits (1181), Expect = e-130
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60
MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60
Query: 61 RELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEE 120
RELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEE
Sbjct: 61 RELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEE 120
Query: 121 SDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQA 180
SDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQA
Sbjct: 121 SDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQA 180
Query: 181 NFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
NFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK
Sbjct: 181 NFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 57.8 bits (138), Expect = 8e-09
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 22 DLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRR---ELEERERAAAREKNRDR 78
D++ + + RDL S K+R T + EE ++ R E E RER RE+ R+R
Sbjct: 263 DINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERER 322
Query: 79 PTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKK 138
RE ++ ++ D D T E D D + E D D ++ K +
Sbjct: 323 REREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRS 382
Query: 139 ERAEEQARKEQEQKAEEERIR 159
E+ +E+E++ E ER R
Sbjct: 383 RSREKSRDRERERERERERER 403
Score = 42.0 bits (97), Expect = 4e-04
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 40 KIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIP 99
K K R +D + R R+L E+E AA +E+ ++ RE + K+ ++
Sbjct: 427 KDKKRDREEDEEDAYERRKLERKLREKE-AAYQERLKNWEIRERKKTREYEKEAEREEER 485
Query: 100 AANLDADDPLTDEEDEDFEEESDDDD---TAALLAELEKIKKE-RAEEQARKEQEQKAEE 155
+ + E ED++++ DD +AL L +KE A+E+ RK ++++ EE
Sbjct: 486 RREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEE 545
Query: 156 ERIRMENILSGNP 168
IR + G+P
Sbjct: 546 --IRQRLLAEGHP 556
Score = 41.2 bits (95), Expect = 7e-04
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 6 RPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELE- 64
R T + +GK E + ++ K+ R+ + + R+ ++ E R R+ +E E
Sbjct: 285 RDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERE-REREKEKERER 343
Query: 65 --ERERAAAREKNRDRP-TREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEES 121
ER+R R K RDR RE D+ +++ + D + E+ D E E
Sbjct: 344 ERERDRDRDRTKERDRDRDRERDRDR--------DRERSSDRNKDRSRSREKSRDRERER 395
Query: 122 DDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMEN 162
+ + E E+ ++ E + +E+E++ +++R R E+
Sbjct: 396 EREREREREREREREREREREREREREREREKDKKRDREED 436
Score = 33.1 bits (74), Expect = 0.20
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 40 KIKYRQTTQDAPEEVRNRDFRRELEE-RERAAAREKNRDRPT-REHTTSSSVSKKPRLDQ 97
+ K R +D E R+RD R + ++R+ +REK+RDR RE ++ ++
Sbjct: 353 RTKERDRDRDR-ERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERER 411
Query: 98 IPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARK---------- 147
+ + E+D+ + E D++D K++++ A Q R
Sbjct: 412 EREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKK 471
Query: 148 ----EQEQKAEEERIR 159
E+E + EEER R
Sbjct: 472 TREYEKEAEREEERRR 487
Score = 33.1 bits (74), Expect = 0.20
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 48 QDAPEEVRNRDFRRELEERERAA-AREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDAD 106
+D P+ R ++ L +RE+ A E++R R +K L++I L
Sbjct: 507 RDDPKYYRGSALQKRLRDREKEMEADERDRKR------------EKEELEEIRQRLLAEG 554
Query: 107 DPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEE 156
P D E + E+E++ + E E ++E +++ +++E+ EEE
Sbjct: 555 HPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEE 604
Score = 32.0 bits (71), Expect = 0.45
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 44 RQTTQDAPEEVRNRDFRRELE-ERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAAN 102
R+ ++D E R R+ RE E ERER RE+ R+R RE + D+ A
Sbjct: 385 REKSRDRERE-RERERERERERERERERERERERER-EREREREKDKKRDREEDEEDAYE 442
Query: 103 LDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMEN 162
+ E++ ++E + + E K+ EE+ R+E ++A+ + +E+
Sbjct: 443 RRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLED 502
Score = 31.2 bits (69), Expect = 0.77
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 21/129 (16%)
Query: 52 EEVRNRD--FRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQI----PAANLDA 105
EE + RD + +E R + E N P++E + KK + + I P A L
Sbjct: 198 EETKRRDQMIKGAIEVLIREYSSELNA--PSQESDSHPRKKKKEKKEDIFRRFPVAPLIP 255
Query: 106 DDPLTDEEDEDFEEESDDDDTAAL----------LAELEKIKKERAE---EQARKEQEQK 152
+T E+ E E D D + E EK KKE+ E+ R+E+E++
Sbjct: 256 YPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERE 315
Query: 153 AEEERIRME 161
E ER R E
Sbjct: 316 RERERERRE 324
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 50.1 bits (118), Expect = 2e-06
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 48 QDAPEEVRNRD-----FRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAAN 102
Q EE+ R+ R+ EER R A+E+ ++R +EH + + RL+QI
Sbjct: 588 QREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTE 647
Query: 103 LDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMEN 162
L A D + ED EE D A + +LEK KKE E +E++ E R+E
Sbjct: 648 LGA-KAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEE 706
Query: 163 I 163
I
Sbjct: 707 I 707
Score = 32.0 bits (71), Expect = 0.45
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 48 QDAPEEVRNRDFRRE--LEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDA 105
Q E + RE LE + R + ++RD + + +L Q
Sbjct: 727 QQEEERITTMQLEREKALEHKNRMSRMLEDRDLFVMRLKAARQSVYEEKLKQF------- 779
Query: 106 DDPLTDEEDEDFEE---ESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMEN 162
++ L +E EE + ++ E E+ ++ RAEEQ KE+E++ ER + E
Sbjct: 780 EERLAEERHNRLEERKRQRKEERRITYYREKEEEEQRRAEEQMLKEREERERAERAKREE 839
Query: 163 IL 164
L
Sbjct: 840 EL 841
Score = 30.4 bits (67), Expect = 1.3
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 24 SQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREH 83
+++S+ RDL ++ + Q EE + R EER R + R R +E
Sbjct: 748 NRMSRMLEDRDL---FVMRLKAARQSVYEEKLKQFEERLAEERHN---RLEERKRQRKEE 801
Query: 84 TTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKI-KKERAE 142
+ +K +Q A + E E + E + + + +LE++ +K+R
Sbjct: 802 RRITYYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQR 861
Query: 143 EQARKEQEQKAEEERIRMENILS 165
E +E+E++ EEER ++ LS
Sbjct: 862 ELEIEERERRREEERRLGDSSLS 884
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 40 KIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIP 99
K K R+ + P E R EERE +E++RD RE K P ++
Sbjct: 1181 KEKAREESWGPPRE------SRPSEEREWDREKERDRDNQDREEN-----DKDPERERDR 1229
Query: 100 AANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEER-I 158
++D +D DE +++++ + ++R + + ++ + E R +
Sbjct: 1230 ERDVDREDRFRRPRDEGGWRRGPAEESSSWRDSSRRDDRDRDDRRRERDDRRDLRERRDL 1289
Query: 159 RMENILSGNPL 169
R + G PL
Sbjct: 1290 RDDRDRRGPPL 1300
Score = 28.5 bits (62), Expect = 5.0
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 23/115 (20%)
Query: 44 RQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANL 103
R+ +D + R RD RR+L ER R P R + VS R D +
Sbjct: 1264 RRDDRDRDDRRRERDDRRDLRERRDLRDDRDRRGPPLR--SEREEVSSWRRADDRKDDRV 1321
Query: 104 DADDP--------LTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQE 150
+ DP L+ + + D + E + + KE+A +A K++E
Sbjct: 1322 EERDPPRRVPPPALSRDRERDRDREREGE-------------KEKASWRAEKDRE 1363
Score = 27.7 bits (60), Expect = 8.5
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 133 LEKIKKERAEEQARKEQEQKAEEERIRME 161
+++ K+E + +A ++ +KAEEER+R E
Sbjct: 587 IQREKEELEQREAELQKVRKAEEERLRQE 615
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 48.5 bits (114), Expect = 5e-06
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 60 RRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEE 119
+RE EER+ E + + EH + + + + D + LT EEDED E+
Sbjct: 971 KREAEERDSTEQEEAGPEILSNEHVGARASPSQ--------GDSDERESLTREEDEDSEK 1022
Query: 120 ESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENI 163
E +++D E+E++++E+ E+ + ++E++ EEE + E +
Sbjct: 1023 EEEEED-----KEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1061
Score = 30.0 bits (66), Expect = 1.7
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 64 EERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDD 123
+ERE + RE++ D E + + + + P DEE+E+ EEE ++
Sbjct: 1007 DERE-SLTREEDEDSEKEEEEEDKEMEELQE-------EKECEKPQGDEEEEEEEEEVEE 1058
Query: 124 DDTAALLAELEKIKKE------RAEEQAR-------KEQEQKAEEE 156
++ E E+ K E RAE QA + EQ +EE+
Sbjct: 1059 EEVEEAENEGEEAKTEGLMKDDRAESQASSLGQKVGESSEQVSEEK 1104
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 48.5 bits (114), Expect = 5e-06
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 60 RRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEE 119
+RE EER+ E + + EH + + + + D + LT EEDED E+
Sbjct: 987 KREAEERDSTEQEEAGPEILSNEHVGARASPSQ--------GDSDERESLTREEDEDSEK 1038
Query: 120 ESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENI 163
E +++D E+E++++E+ E+ + ++E++ EEE + E +
Sbjct: 1039 EEEEED-----KEMEELQEEKECEKPQGDEEEEEEEEEVEEEEV 1077
Score = 30.0 bits (66), Expect = 1.7
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 64 EERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDD 123
+ERE + RE++ D E + + + + P DEE+E+ EEE ++
Sbjct: 1023 DERE-SLTREEDEDSEKEEEEEDKEMEELQE-------EKECEKPQGDEEEEEEEEEVEE 1074
Query: 124 DDTAALLAELEKIKKE------RAEEQAR-------KEQEQKAEEE 156
++ E E+ K E RAE QA + EQ +EE+
Sbjct: 1075 EEVEEAENEGEEAKTEGLMKDDRAESQASSLGQKVGESSEQVSEEK 1120
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 47.8 bits (112), Expect = 8e-06
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 20 EGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRP 79
E L +L KQ S L S + + + + EEVR + R+ EE EK ++
Sbjct: 2231 ESLLDELEKQES---LSSEEEEEREEEEEREEEEVREEEEERKEEEE----GEEKQVEKE 2283
Query: 80 TREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKE 139
E KK + + + ++ +++EE E +E +++++ +L E+++ K+
Sbjct: 2284 EEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEI 2343
Query: 140 RAEEQARKEQEQ--KAEEERIRMENILSGNP 168
+E+ K QEQ K+ R R+ +IL G P
Sbjct: 2344 LKKEKQFKLQEQRRKSLRGRERVLSILRGVP 2374
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 107 DPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
+ + + DE EE ++ +LL ELEK + +EE+ +E+E++ EEE +R E
Sbjct: 2211 EKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREE 2265
Score = 37.0 bits (84), Expect = 0.014
Identities = 30/152 (19%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 26 LSKQYSSRDLPSHTKIKYRQTTQDAPEE--VRNRDFRRELEERERAAAREKNRDRP---- 79
++K+ + S K+ + D EE + + L+ R R K D+P
Sbjct: 2154 INKEEKMTEEESKLARKHSEVILDDEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKF 2213
Query: 80 --------TREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLA 131
+ EH + S L++ + + + ++ +EE+ + EE ++++
Sbjct: 2214 SSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEE 2273
Query: 132 ELEKIKKERAEEQARKEQEQKAEEERIRMENI 163
E E+ + E+ EE+ +K++++K +EE E +
Sbjct: 2274 EGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEV 2305
Score = 34.3 bits (77), Expect = 0.091
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 49 DAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDP 108
D P+E F +++E E + + E S+S + ++ + ++
Sbjct: 2207 DKPKE----KFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEV 2262
Query: 109 LTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
+EE+ EEE ++ E +K KKE+ +E+ ++++E E+E I E
Sbjct: 2263 REEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSE 2315
>gi|21314720 Smad nuclear interacting protein [Homo sapiens]
Length = 396
Score = 44.7 bits (104), Expect = 7e-05
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 7 PTFEPARGG----------------RGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDA 50
PT EPAR G + K G S+ + +R P H+ +K +Q +D
Sbjct: 56 PTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRS-PHHSTVKVKQEREDH 114
Query: 51 PEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLT 110
P R RE E+E AR +RDR + +++P Q + D +
Sbjct: 115 PRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQA 174
Query: 111 DEEDEDF 117
EE+ +F
Sbjct: 175 QEEEREF 181
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 44.7 bits (104), Expect = 7e-05
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 48 QDAPEEVRNRDFRRELEERERAAAREKNRDR-PTREHTTSSSVSKKPRLDQIPAANLDAD 106
Q +PEE+R R+ +E ERE+ +E+ ++R RE K+ L++ + +
Sbjct: 498 QPSPEEIREREREKE-REREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREME 556
Query: 107 DPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENI 163
E++++ E + + + EL+K+K++ E + KE+E+ E+ R N+
Sbjct: 557 KERKQEKEKELERQKEKE------KELQKMKEQEKECELEKEREKLEEKIEPREPNL 607
Score = 33.9 bits (76), Expect = 0.12
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 67 ERAAAREKNRDRPTREHTTSSSVSKKPRLDQ-------IPAANLDADDPLTDEEDEDFEE 119
ERA R + +R E ++ K RLD+ P+ + E + + E
Sbjct: 460 ERARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEEIREREREKEREREKEL 519
Query: 120 ESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
E + + E ++ +++ E++ KEQE++ E E+ R +
Sbjct: 520 EKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQ 561
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 55 RNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEED 114
R + R +EE+ +AA EK + R + K+P ++I + + E +
Sbjct: 465 RREEEERRMEEQRKAACAEKLK----RLDEKLGILEKQPSPEEIREREREKEREREKELE 520
Query: 115 EDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEER 157
++ E+E + + + EK K+ E++ ++E E++ ++E+
Sbjct: 521 KEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEK 563
Score = 29.3 bits (64), Expect = 2.9
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 81 REHTTSSSVSKKPRL--DQIPAANLDA----DDPLTDEE---DEDFEEESDDDDTAALLA 131
+E TSS + P+L Q P + A P ++ DED + + + A
Sbjct: 398 QERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIWKQRRRQQSEISA 457
Query: 132 ELEKIKKERAEEQARKEQEQKA--EEERIRMENILSGNPLLNLTGPSQPQANFKVKRRWD 189
+E+ +K R EE+ R E+++KA E+ R++ L L P + + + K R
Sbjct: 458 AVERARKRREEEERRMEEQRKAACAEKLKRLDEKL--GILEKQPSPEEIREREREKERER 515
Query: 190 DDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEK 226
+ + K +Q+++K D R + +K +EK
Sbjct: 516 EKELEKE-----QEQEREKEREKDRERQQEKEKELEK 547
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 44.7 bits (104), Expect = 7e-05
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 12 ARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAA 71
+RG RG S S + S + S + R +D ++ R+ F R ER+R
Sbjct: 575 SRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDN 634
Query: 72 REKNR--DRPTREHTTSSSVSKKPRLDQIPAANL-DADDPLTDEEDEDFEEESDDDDTAA 128
RE+++ P R + + + R ++ + D D E D + E + + +
Sbjct: 635 RERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERE 694
Query: 129 LLAELEKIKKERAEEQARKEQEQKAEEERIR 159
+ E+ K+ E + +E+E++ E+ER R
Sbjct: 695 RERDREREKERELERERAREREREREKERDR 725
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 58 DFRRELEERERAAAREKNRDRPT-REHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDED 116
D RR+ RER RE++R+R RE K+ L++ A + + E D +
Sbjct: 669 DDRRDERARERDRERERDRERERERERERDREREKERELERERARERERERE--KERDRE 726
Query: 117 FEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPS 176
+ + D D E ++ +KER E+ +E+E++ E ER R E
Sbjct: 727 RDRDRDHDRERERERERDR-EKEREREREERERERERERERER-ERERERERARERDKER 784
Query: 177 QPQANFKVKRRWDDDVVFK--------NCAKGVDDQKKDKRFVND 213
+ Q +++ K + DD K N G D++K KR+ N+
Sbjct: 785 ERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNE 829
Score = 36.2 bits (82), Expect = 0.024
Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 52 EEVRNRDFRRELE-ERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLT 110
E R+RD RE E ERER +E+ R+R RE ++ ++ + D
Sbjct: 726 ERDRDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDKERE 785
Query: 111 DEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLL 170
+ D + +++ DD EK ++ R + R +++ ++R R E
Sbjct: 786 RQRDWEDKDKGRDD-------RREKREEIREDRNPRDGHDERKSKKRYRNE--------- 829
Query: 171 NLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSE 218
G P+ + K +R D + DD+ + R ++ +R +
Sbjct: 830 ---GSPSPRQSPKRRREHSPD---SDAYNSGDDKNEKHRLLSQVVRPQ 871
Score = 35.4 bits (80), Expect = 0.041
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 42 KYRQTTQDAPEE-VRNRDFRRELEERERAAAREKNRDRP-TREHTTSSSVSKKPRLDQ-- 97
+ R+ +DA ++ RNRD R L ERER R+K RD RE S SV + D+
Sbjct: 1319 RQREWDRDADKDWPRNRD-RDRLRERERERERDKRRDLDRERERLISDSVERDRDRDRDR 1377
Query: 98 -IPAANLDA----DDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQK 152
++ +++ + L E + D E S D +L + E++ K+ Q +E +
Sbjct: 1378 TFESSQIESVKRCEAKLEGEHERDLESTSRD----SLALDKERMDKDLGSVQGFEETNKS 1433
Query: 153 AEEERI 158
E +
Sbjct: 1434 ERTESL 1439
Score = 32.7 bits (73), Expect = 0.26
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 39/202 (19%)
Query: 16 RGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRREL-EERERAAAREK 74
RGKG + S + + DL K K RQ P++ + + +E R REK
Sbjct: 66 RGKGYSSNYRRSPERPTGDLRERMKNK-RQDVDTEPQKRNTEESSSPVRKESSRGRHREK 124
Query: 75 NRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAAL----L 130
+ T+E T P ++EE+ ++E DD D + +
Sbjct: 125 EDIKITKERT-----------------------PESEEENVEWETNRDDSDNGDINYDYV 161
Query: 131 AELE-KIKKERAEEQARK-EQEQKAEEERIRMENILSGNPLLNLTGPSQP-QANFKVKRR 187
EL ++K+++ + + K EQE + E I ++ +S + + PS + + K +R
Sbjct: 162 HELSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKR 221
Query: 188 WDDDVVFKNCAKGVDDQKKDKR 209
K+ K KKD++
Sbjct: 222 -------KSSPKSSSASKKDRK 236
Score = 29.3 bits (64), Expect = 2.9
Identities = 28/141 (19%), Positives = 56/141 (39%), Gaps = 7/141 (4%)
Query: 16 RGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKN 75
RGK + + ++ +D S + + +D + RD R + RE +R+
Sbjct: 421 RGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDR---RDARDTRDRRELRDSRDMR 477
Query: 76 RDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEK 135
R R+++ + S+ PR + + DA D D E D + D +
Sbjct: 478 DSREMRDYSRDTKESRDPRDSR---STRDAHD-YRDREGRDTHRKEDTYPEESRSYGRNH 533
Query: 136 IKKERAEEQARKEQEQKAEEE 156
+++E + + R E ++ E
Sbjct: 534 LREESSRTEIRNESRNESRSE 554
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 44.3 bits (103), Expect = 9e-05
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 27 SKQYSSRDL--PSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHT 84
S+ YS R + ++K R + + R RER +R ++RDR T +
Sbjct: 573 SRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRAS 632
Query: 85 TSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQ 144
S S ++ DQ NL + + E E+E + + ++ + +K KER EQ
Sbjct: 633 RSRSRDRRKIDDQ--RGNLSGNS--HKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQ 688
Query: 145 ARKEQEQKAEEERIRMEN 162
+++++QK EE+ + +
Sbjct: 689 DKRKEKQKREEKDFKFSS 706
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 44.3 bits (103), Expect = 9e-05
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 27 SKQYSSRDL--PSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHT 84
S+ YS R + ++K R + + R RER +R ++RDR T +
Sbjct: 573 SRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRAS 632
Query: 85 TSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQ 144
S S ++ DQ NL + + E E+E + + ++ + +K KER EQ
Sbjct: 633 RSRSRDRRKIDDQ--RGNLSGNS--HKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQ 688
Query: 145 ARKEQEQKAEEERIRMEN 162
+++++QK EE+ + +
Sbjct: 689 DKRKEKQKREEKDFKFSS 706
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 43.9 bits (102), Expect = 1e-04
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 40/155 (25%)
Query: 36 PSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAA---------------REKNRDRPT 80
P H + + R+ + E+ R+ RE+E RER + R ++RDR
Sbjct: 1128 PQHPRAEQREQERAVREQWAERE--REMERRERTRSEREWDRDKVREGPRSRSRSRDRRR 1185
Query: 81 REHTTSSSVS--KKPRLDQIPAANLDADD--------------PLTDEEDEDFEEESDDD 124
+E S KK + + P A L DD PLTD + E E
Sbjct: 1186 KERAKSKEKKSEKKEKAQEEPPAKL-LDDLFRKTKAAPCIYWLPLTDSQIVQKEAER--- 1241
Query: 125 DTAALLAELEKIKKERAEEQARKEQEQKAEEERIR 159
A E EK +KE+ EE+ +KE+E++AE ER R
Sbjct: 1242 --AERAKEREKRRKEQ-EEEEQKEREKEAERERNR 1273
Score = 41.2 bits (95), Expect = 7e-04
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 25 QLSKQYSSRDLPSHTKIKYRQTTQ---DAPEEVRNRDFRRELEERERAAAREKNRDRPTR 81
Q S + +L H+ K ++ D+ +E + RR R+ AA+ +P
Sbjct: 188 QSSLERPELELSRHSPRKSSSISEEKGDSDDEKPRKGERRSSRVRQARAAKLSEGSQPAE 247
Query: 82 EHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDED-FEEESDDDDTAALLAELEKIKKER 140
E + S+ R+ + ++ +EE+ED EEE DD+ + A + K KE
Sbjct: 248 EEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAPILKEFKEE 307
Query: 141 AEEQARKEQEQKAEE 155
EE R + E+ +E
Sbjct: 308 GEEIPRVKPEEMMDE 322
Score = 33.9 bits (76), Expect = 0.12
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 58 DFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDF 117
DF+ LE E +R R + S +KPR + ++ + E
Sbjct: 186 DFQSSLERPELELSRHSPRKSSSISEEKGDSDDEKPRKGERRSSRVRQARAAKLSEGSQP 245
Query: 118 EEESDDDDTAA--LLAELEKIKKERAEEQARKEQEQKAEEE 156
EE +D +T + L ++ K EE+ +E+E+ EEE
Sbjct: 246 AEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEE 286
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 60 RRELEERERAAAREKNRDR-PTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFE 118
+ ELEE +R+ ++K R R +E ++S + S ++ + ++ +EE+E+ E
Sbjct: 1371 KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEE------EKEEEEEEEEEEEEE 1424
Query: 119 EESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENI 163
EE ++DD+ + +KI+K +++ R E + +EE R + I
Sbjct: 1425 EEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRI 1469
Score = 34.3 bits (77), Expect = 0.091
Identities = 27/142 (19%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 24 SQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEE----RERAAAREKNRDRP 79
S + S + H ++++ T D + +E +E R + E + D
Sbjct: 1286 SDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSD 1345
Query: 80 TREHTTSSSVSK-----KPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELE 134
+E S VS+ +PR A L+ + ++ + + +D ++ + E
Sbjct: 1346 FQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSE 1405
Query: 135 KIKKERAEEQARKEQEQKAEEE 156
+ ++E+ EE+ +E+E++ EE+
Sbjct: 1406 EEEEEKEEEEEEEEEEEEEEED 1427
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 60 RRELEERERAAAREKNRDR-PTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFE 118
+ ELEE +R+ ++K R R +E ++S + S ++ + ++ +EE+E+ E
Sbjct: 1409 KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEE------EKEEEEEEEEEEEEE 1462
Query: 119 EESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENI 163
EE ++DD+ + +KI+K +++ R E + +EE R + I
Sbjct: 1463 EEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRI 1507
Score = 34.3 bits (77), Expect = 0.091
Identities = 27/142 (19%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 24 SQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEE----RERAAAREKNRDRP 79
S + S + H ++++ T D + +E +E R + E + D
Sbjct: 1324 SDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSD 1383
Query: 80 TREHTTSSSVSK-----KPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELE 134
+E S VS+ +PR A L+ + ++ + + +D ++ + E
Sbjct: 1384 FQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSE 1443
Query: 135 KIKKERAEEQARKEQEQKAEEE 156
+ ++E+ EE+ +E+E++ EE+
Sbjct: 1444 EEEEEKEEEEEEEEEEEEEEED 1465
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 42.7 bits (99), Expect = 3e-04
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 40 KIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIP 99
+IK ++ + +E++ + R + E+ E R +E+ S SKK L+ IP
Sbjct: 425 EIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIER----KENIKPSLGSKKNLLESIP 480
Query: 100 AANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEE 156
+ D + + ++ ED E D DD + E IK E EE+A+ E EE+
Sbjct: 481 THS-DQEKEVNIKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAKSGDETNKEED 536
Score = 33.1 bits (74), Expect = 0.20
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 72 REKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLA 131
+E N +P R+D+ ++A++ DE +EE +DD+
Sbjct: 487 KEVNIKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAKSGDETNKEEDEDDE------ 540
Query: 132 ELEKIKKERAEEQARKEQEQKAEEE 156
E E+ ++E EE+ + + EEE
Sbjct: 541 EAEEEEEEEEEEEDEDDDDNNEEEE 565
>gi|12711674 UPF3 regulator of nonsense transcripts homolog B
isoform 2 [Homo sapiens]
Length = 470
Score = 42.4 bits (98), Expect = 3e-04
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 41 IKYRQTTQDAPEEVRNRDFRRELE-ERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIP 99
+ + + Q EE R RRE+E +R+R R K ++ R+ + K ++D+IP
Sbjct: 201 LSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEEKRKR---KDIEKLKKIDRIP 257
Query: 100 AANLDADDP---LTDEEDEDFEEESDDDDTAALL----------------------AELE 134
+ D+P L + ++ E+E D + A L +EL+
Sbjct: 258 ERDKLKDEPKIKLLKKPEKGDEKELDKREKAKKLDKENLSDERASGQSCTLPKRSDSELK 317
Query: 135 KIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKRRWDDDVVF 194
K +R E+++ ++ ++ E E IL L Q + + K R++ + F
Sbjct: 318 DEKPKRPEDESGRDYREREREYERDQERILRERERLK----RQEEERRRQKERYEKEKTF 373
Query: 195 KNCAKGVDDQKKDKRFVNDTLRSEFHK 221
K + ++ KK+K DTLR + K
Sbjct: 374 K---RKEEEMKKEK----DTLRDKGKK 393
Score = 29.6 bits (65), Expect = 2.2
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 70 AAREKNRDRPTREHTTSSSVSKKPRLDQIPAAN--LDADDPLTDEEDEDFEEESDDDDTA 127
AA++K + R T+ T + L+ N + + EE E E T
Sbjct: 139 AAKKKTKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPETLLEEIEAKNRELIAKKTT 198
Query: 128 ALLAEL---EKIKKERAEEQARKEQEQKAEEERIR 159
LL+ L +++++E+ EE+ R+E E+K + E R
Sbjct: 199 PLLSFLKNKQRMREEKREERRRREIERKRQREEER 233
Score = 29.6 bits (65), Expect = 2.2
Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 22 DLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTR 81
+LS S LP + + + PE+ RD+R ERER R++ R R
Sbjct: 295 NLSDERASGQSCTLPKRSDSELKDEKPKRPEDESGRDYR----EREREYERDQERILRER 350
Query: 82 EHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERA 141
E ++ + ++ + ++E+ ++E D +K KK +
Sbjct: 351 ERLKRQEEERRRQKERY------EKEKTFKRKEEEMKKEKD--------TLRDKGKKAES 396
Query: 142 EEQARKEQEQKAEEERIRMENILS-GNPLLNLTGPSQPQAN 181
E ++ + +EE ++ + I + P + L P N
Sbjct: 397 TESIGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRN 437
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 22 DLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPT- 80
D + ++ RD + + + T+ E R R+ +R+ + RER R++ R R T
Sbjct: 51 DREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTD-RERDKDRDRERKRETD 109
Query: 81 --REHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKK 138
RE + + ++ + E E + + D AE E+ KK
Sbjct: 110 RNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKK 169
Query: 139 ERAEEQARKEQEQKAEEER 157
ER +E+ ++ +E+K EE+R
Sbjct: 170 ERKKERKKERKEKKKEEKR 188
Score = 35.4 bits (80), Expect = 0.041
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 33 RDLPSHTKIKYRQTTQDAPEEVRNRDFRRELE-ERERAAAREKNRDRPTREHTTSSSVSK 91
R+ + T+ + R +D E R+R RE E ER++ R++ R+R T T +
Sbjct: 25 RERENQTERENRHRQRDRHRE-RDRQTDREKERERQKERDRQRQRERETERETERQRERQ 83
Query: 92 KPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQ 151
+ R D + D + + E+D + E+ K+ E +E+++
Sbjct: 84 RQR-----ERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR 138
Query: 152 KAEEERIR 159
+ E ER R
Sbjct: 139 QRERERQR 146
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 41.6 bits (96), Expect = 6e-04
Identities = 28/128 (21%), Positives = 57/128 (44%)
Query: 32 SRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSK 91
S++ P + D + R RD RE E+ER R+++R+R +E T+ + +
Sbjct: 56 SQESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDR 115
Query: 92 KPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQ 151
+ + + + E D E E D D + EK + + E + +E+++
Sbjct: 116 EKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDR 175
Query: 152 KAEEERIR 159
+ E+++ R
Sbjct: 176 EREKQKER 183
Score = 40.8 bits (94), Expect = 0.001
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 48 QDAPEEVRNRDFRRELE-ERERAAAREKNRDRPTR-EHTTSSSVSKKPRLDQIPAANLDA 105
Q E R+RD +R+ E ERER RE++R R T+ E + + D+ D
Sbjct: 180 QKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDR 239
Query: 106 DDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIR 159
D + + D +EE + KKER +E+ K++E+K E++ R
Sbjct: 240 DRGKERDRERDRKEERKKER-----------KKERKKERKEKKKEEKRREDKKR 282
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 12 ARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAA 71
+RG G E S Q + +D + + R ++ E+ R+RD +R+ E R +
Sbjct: 50 SRGRLGSQESPRSWGLGQ-AHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKE 108
Query: 72 REKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLA 131
+NRDR + + + + ++ + D E D D E+E +
Sbjct: 109 TNRNRDREKQ-----TEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDG 163
Query: 132 ELEKIKKERAEEQARKEQEQKAEEERIRMEN 162
+ E + + + K++E++ E +R R +
Sbjct: 164 QRETETERERDREREKQKERETERDRDRQRD 194
Score = 38.1 bits (87), Expect = 0.006
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 40 KIKYRQTTQDAPEEVRNRDFRRELE-ERERAAAREKNRDRPTREHTTSSSVSKKPRLDQI 98
K + RQT +D RD +RE E ERER REK ++R T ++K R Q
Sbjct: 151 KERERQTEKD-------RDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQT 203
Query: 99 PAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERI 158
T+ + E E + D KER E+ RKE+ +K ++
Sbjct: 204 DRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKER 263
Query: 159 RME 161
+ E
Sbjct: 264 KKE 266
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 41.6 bits (96), Expect = 6e-04
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 85 TSSSVSKKPRLDQIPAANLDADDPLT--DEEDEDFEEESDDDDTAALLAELEKIKKERAE 142
TSS P L AA+ P + D+ED DF+ + D+++ E+E+ ++
Sbjct: 256 TSSKAGSSPCLGSSSAAS-SPPPPASRLDDEDGDFQPQEDEEEDDEETIEVEEQQEGNDA 314
Query: 143 EQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQP 178
E R+E E E + +E +L P L GPS P
Sbjct: 315 EAQRREIELLRREGELPLEELLRSLPPQLLEGPSSP 350
Score = 32.7 bits (73), Expect = 0.26
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 90 SKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQ 149
+++P + + + +D DEEDE EEE +A+ +E E+ + +++ QA +E+
Sbjct: 485 AEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQADEEE 544
Query: 150 E 150
E
Sbjct: 545 E 545
Score = 31.6 bits (70), Expect = 0.59
Identities = 38/158 (24%), Positives = 58/158 (36%), Gaps = 43/158 (27%)
Query: 16 RGKGEGDLSQLSKQYSSRDL-----PSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAA 70
R +GE L +L + + L PS T + T+D PEE + + LE + +
Sbjct: 325 RREGELPLEELLRSLPPQLLEGPSSPSQTPSSHDSDTRDGPEEGAEEEPPQVLEIKPPPS 384
Query: 71 AREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDF----EEESDDDDT 126
A + +P DE+DE+F EE D++DT
Sbjct: 385 AVTQRNKQPWH----------------------------PDEDDEEFTANEEEAEDEEDT 416
Query: 127 AALLAELEKIKKERAEEQARKEQEQKAEEERIRMENIL 164
A +LE E E + A E + ME +L
Sbjct: 417 IAAEEQLE------GEVDHAMELSELAREGELSMEELL 448
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/71 (19%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 96 DQIPAANLDADDPLTDEEDEDFEEE-SDDDDTAALLAELEKIKKERAEEQARKEQEQKAE 154
++ P + + ++ ED E+E S++++T+ A E +E + Q++ + +++ E
Sbjct: 486 EEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQADEEEE 545
Query: 155 EERIRMENILS 165
++ +E +L+
Sbjct: 546 DDDFGVEYLLA 556
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 41.2 bits (95), Expect = 7e-04
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 24 SQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREH 83
SQL Q + +I+ RQ E+ R ++ RE ERER R+R RE
Sbjct: 125 SQLPAQVQNGPSQEELEIQRRQLQ----EQQRQKELERERLERERMERERLERERLERER 180
Query: 84 TTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKK-ERAE 142
++ RL+Q E E E + + L E++++ ER E
Sbjct: 181 L------ERERLEQ-----------------EQLERERQERERQERLERQERLERQERLE 217
Query: 143 EQARKEQEQKAEEERIRMENI 163
Q R ++E++ +ER R+E +
Sbjct: 218 RQERLDRERQERQERERLERL 238
Score = 35.8 bits (81), Expect = 0.031
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Query: 11 PARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAA 70
PA+ G + +L +Q + + + + + E + RE ERER
Sbjct: 128 PAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLE 187
Query: 71 AREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALL 130
+ R+R RE + ++ RL++ L+ + L E E E E L
Sbjct: 188 QEQLERERQERER--QERLERQERLER--QERLERQERLDRERQERQERER--------L 235
Query: 131 AELEKIKKER-AEEQARKEQEQKAEEERI 158
LE+ ++ER +EQ +EQ + E RI
Sbjct: 236 ERLERERQERERQEQLEREQLEWERERRI 264
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 41.2 bits (95), Expect = 7e-04
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 24 SQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREH 83
SQL Q + +I+ RQ E+ R ++ RE ERER R+R RE
Sbjct: 125 SQLPAQVQNGPSQEELEIQRRQLQ----EQQRQKELERERLERERMERERLERERLERER 180
Query: 84 TTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKK-ERAE 142
++ RL+Q E E E + + L E++++ ER E
Sbjct: 181 L------ERERLEQ-----------------EQLERERQERERQERLERQERLERQERLE 217
Query: 143 EQARKEQEQKAEEERIRMENI 163
Q R ++E++ +ER R+E +
Sbjct: 218 RQERLDRERQERQERERLERL 238
Score = 35.8 bits (81), Expect = 0.031
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Query: 11 PARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAA 70
PA+ G + +L +Q + + + + + E + RE ERER
Sbjct: 128 PAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLE 187
Query: 71 AREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALL 130
+ R+R RE + ++ RL++ L+ + L E E E E L
Sbjct: 188 QEQLERERQERER--QERLERQERLER--QERLERQERLDRERQERQERER--------L 235
Query: 131 AELEKIKKER-AEEQARKEQEQKAEEERI 158
LE+ ++ER +EQ +EQ + E RI
Sbjct: 236 ERLERERQERERQEQLEREQLEWERERRI 264
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 41.2 bits (95), Expect = 7e-04
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 42 KYRQTTQDAPEEVRNRDFRRELEERERAA-AREKNRDRPTREHTTSSSVSKKPRLDQIPA 100
K R + +E R R + ELE ++R A+ +R TR S + + ++
Sbjct: 486 KRRLAREQREKEERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQ 545
Query: 101 ANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRM 160
A++ E +E + ++ A + E E++++ER + R+EQE+ E + R+
Sbjct: 546 LQRQAEERALREREEAERAQRQKEEEARVREEAERVRQEREKHFQREEQERL--ERKKRL 603
Query: 161 ENIL 164
E I+
Sbjct: 604 EEIM 607
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 121 SDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
+D ++ LLAE ++ +E+ E++ R+ +EQ+ E + R E
Sbjct: 474 TDPEEATRLLAEKRRLAREQREKEERERREQEELERQKREE 514
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 41.2 bits (95), Expect = 7e-04
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 43 YRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAAN 102
Y + A +E R + +ERE AAAR + R + K+ +L + N
Sbjct: 605 YVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDEQRN 664
Query: 103 LDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARK-----EQEQKAEEER 157
AD + +EE EDF+ + DT + + + ++ + + K ++ Q +E
Sbjct: 665 STADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDDPGSHKRGRRGKRGQNGFKEF 724
Query: 158 IRMENI 163
R E I
Sbjct: 725 TRQEQI 730
Score = 32.3 bits (72), Expect = 0.35
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 74 KNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAEL 133
K RD+ ++ S +K +L + A L+A +E ED E++ ++ + E
Sbjct: 306 KERDKLLKQEEMKSLAFEKAKLKREKADALEAKK----KEKEDKEKKREE---LKKIVEE 358
Query: 134 EKIKKERAEEQARKEQEQKAEEERIRME 161
E++KK+ EE+ R + E++ E E++R E
Sbjct: 359 ERLKKK--EEKERLKVEREKEREKLREE 384
Score = 28.1 bits (61), Expect = 6.5
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 67 ERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDT 126
++ + R +R RP+ E S D++ D D+ E+E++E E D+DD+
Sbjct: 1166 KQRSRRLSSRQRPSLESDEDVEDSMGGEDDEV-----DGDEEEGQSEEEEYEVEQDEDDS 1220
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 41.2 bits (95), Expect = 7e-04
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 43 YRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAAN 102
Y + A +E R + +ERE AAAR + R + K+ +L + N
Sbjct: 637 YVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDEQRN 696
Query: 103 LDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARK-----EQEQKAEEER 157
AD + +EE EDF+ + DT + + + ++ + + K ++ Q +E
Sbjct: 697 STADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDDPGSHKRGRRGKRGQNGFKEF 756
Query: 158 IRMENI 163
R E I
Sbjct: 757 TRQEQI 762
Score = 32.3 bits (72), Expect = 0.35
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 74 KNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAEL 133
K RD+ ++ S +K +L + A L+A +E ED E++ ++ + E
Sbjct: 306 KERDKLLKQEEMKSLAFEKAKLKREKADALEAKK----KEKEDKEKKREE---LKKIVEE 358
Query: 134 EKIKKERAEEQARKEQEQKAEEERIRME 161
E++KK+ EE+ R + E++ E E++R E
Sbjct: 359 ERLKKK--EEKERLKVEREKEREKLREE 384
Score = 28.1 bits (61), Expect = 6.5
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 67 ERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDT 126
++ + R +R RP+ E S D++ D D+ E+E++E E D+DD+
Sbjct: 1198 KQRSRRLSSRQRPSLESDEDVEDSMGGEDDEV-----DGDEEEGQSEEEEYEVEQDEDDS 1252
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 40.8 bits (94), Expect = 0.001
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 111 DEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEER----IRMENI--L 164
DEE+E+ EEE ++D+ E E+ ++E EE+ +E+E++ EEE I E+
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHT 320
Query: 165 SGNPLLNLTGPS----QPQANFKVKRRWDDD 191
S L GP +P+ + V+ R DDD
Sbjct: 321 SAQKAPELRGPESPSPKPEYSVIVEVRSDDD 351
Score = 35.8 bits (81), Expect = 0.031
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 109 LTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEE 156
L+ EE+++ EEE ++++ E E+ ++E EE+ +E+E++ EEE
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 40.8 bits (94), Expect = 0.001
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 18 KGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVR-NRDFRRELEERERAAAREKNR 76
+ + DL L + RD + +++Q + PEE + R+ ++E + R+R + EK
Sbjct: 1262 QSQQDLQHLLGEQQERDREQERR-RWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQL 1320
Query: 77 DRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEE-DEDFEEES--DDDDTAALLAEL 133
R RE + + ++ + PL +E D F EE + L E
Sbjct: 1321 LREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFREEELRHQEQGRKFLEEE 1380
Query: 134 EKIKKERAE------EQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKRR 187
++++++ E EQ + QE++ + + R L+ R
Sbjct: 1381 QRLRRQERERKFLKEEQQLRCQEREQQLRQDRDRKFREEEQQLS---------------R 1425
Query: 188 WDDDVVFKNCAKGVDDQKKDKRFVND--TLRSEFHKKFMEK 226
+ D F+ + V Q+++++F+ + LR E H+KF E+
Sbjct: 1426 QERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFREE 1466
Score = 40.4 bits (93), Expect = 0.001
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 20 EGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRE---LEERERAAAREKNR 76
E + QL +Q R + +++ + Q + R+R FR E +ERE R +
Sbjct: 1734 ETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQES 1793
Query: 77 DRPTREHTTSSSVSKKPRL--DQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELE 134
DR RE ++ +L Q ++ L EE E + D A
Sbjct: 1794 DRKFREEEQLRQEREEQQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFAT 1853
Query: 135 KIKKERAEEQARKEQEQKAEEERIR 159
+ K R E++ +E+EQK +ER R
Sbjct: 1854 QEKSRREEQELWQEEEQKRRQERER 1878
Score = 40.0 bits (92), Expect = 0.002
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 44 RQTTQDAPEEVRNRDFRRE--LEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAA 101
R+ + + + R +R E L++ E RE+ R +E KK + +
Sbjct: 915 REEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLL 974
Query: 102 NLDADDPLTDEEDEDF--EEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIR 159
+ + E ++ + EEE ++ L E EK +++ E Q RK+ E + EEE++
Sbjct: 975 GEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLL 1034
Query: 160 ME 161
E
Sbjct: 1035 RE 1036
Score = 39.7 bits (91), Expect = 0.002
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 47 TQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDAD 106
T++ P+E + R RREL E R EK + R R+ +K +
Sbjct: 201 TEEFPDEEQLR--RRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKR--------- 249
Query: 107 DPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENIL 164
+ + +E+E +EE + L E E+++K +E R+ QE++ +++R+R E L
Sbjct: 250 ETVLRKEEEKLQEE-EPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQL 306
Score = 39.7 bits (91), Expect = 0.002
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 8/138 (5%)
Query: 25 QLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEER-ERAAAREKNRDRPTREH 83
QL ++ + + +Q ++ EE R + RRE EER E+ RE+ +R RE
Sbjct: 305 QLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEER--REQ 362
Query: 84 TTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEE 143
++ R Q L + L E+ E++ + +L + ++ R E+
Sbjct: 363 QLRREQEEERREQQ-----LRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQ 417
Query: 144 QARKEQEQKAEEERIRME 161
Q R+EQ+ + E+E R E
Sbjct: 418 QLRREQQLRREQEEERHE 435
Score = 39.7 bits (91), Expect = 0.002
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 22 DLSQLSKQYSSRDLPSHTKIKYRQTTQDAPE--------EVRNRDFRRE---LEERERAA 70
D QL +Q + L K+R+ Q E + R+R F E L +ER
Sbjct: 1600 DEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQ 1659
Query: 71 AREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESD----DDDT 126
+RDR RE ++ +L + + D +EE + +E + ++
Sbjct: 1660 QLRHDRDRKFREEEQLLQEGEEQQLRR-----QERDRKFREEEQQLRRQERERKFLQEEQ 1714
Query: 127 AALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKR 186
ELE+ K R EEQ R+E EQ+ + R IL L +P+ + R
Sbjct: 1715 QLRRQELER--KFREEEQLRQETEQEQLRRQERYRKILEEEQL-------RPEREEQQLR 1765
Query: 187 RWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEK 226
R + D F+ ++Q + +R E +KF E+
Sbjct: 1766 RQERDRKFRE-----EEQLRQEREEQQLRSQESDRKFREE 1800
Score = 39.3 bits (90), Expect = 0.003
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 45 QTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLD 104
Q ++ ++ ++ RRE +E E+ R + + R+ ++ R +Q +
Sbjct: 272 QEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQ-----QE 326
Query: 105 ADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENIL 164
+ + ++ E ++ L E E+ ER E+Q R+EQE++ E+++R E L
Sbjct: 327 RREQQEERREQQLRREQEERREQQLRREQEE---ERREQQLRREQEEERREQQLRREQQL 383
Score = 39.3 bits (90), Expect = 0.003
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 35 LPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPR 94
L +++ R+ Q EE E++ER ++E+ RD+ R ++
Sbjct: 834 LEEEEQLQRRERAQQLQEEEDGLQ-----EDQERRRSQEQRRDQKWRWQLEEERKRRRHT 888
Query: 95 LDQIPAAN--LDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQK 152
L PA L + L EE+E+ + E E EK +++ E Q R+E++ +
Sbjct: 889 LYAKPALQEQLRKEQQLLQEEEEELQRE-----------EREKRRRQEQERQYREEEQLQ 937
Query: 153 AEEERIRME 161
EEE++ E
Sbjct: 938 QEEEQLLRE 946
Score = 39.3 bits (90), Expect = 0.003
Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 38/223 (17%)
Query: 25 QLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRE---LEERERAAAREKNRDRPTR 81
QL +Q R + RQ + R+R FR E +ERE + RDR R
Sbjct: 1523 QLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERDRKFR 1582
Query: 82 ---EHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESD------------DDDT 126
+ +K D+ + L E D F E+ +
Sbjct: 1583 LEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQERD 1642
Query: 127 AALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKR 186
L E +++++ E+Q R ++++K EE E +L + + R
Sbjct: 1643 RKFLEEEPQLRRQEREQQLRHDRDRKFREE----EQLLQ-------------EGEEQQLR 1685
Query: 187 RWDDDVVFKNCAKGVDDQKKDKRFVND---TLRSEFHKKFMEK 226
R + D F+ + + Q+++++F+ + R E +KF E+
Sbjct: 1686 RQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREE 1728
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 44 RQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANL 103
++ Q+ + R +D EL++ E RE+ R +E ++ + ++
Sbjct: 1010 KRRRQEWERQYRKKD---ELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGE 1066
Query: 104 DADDPLTDEEDEDF--EEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
+ + E + + EEE ++ L E EK +++ E Q R+E+E + EEE++ E
Sbjct: 1067 ERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLRE 1126
Score = 38.9 bits (89), Expect = 0.004
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 25/137 (18%)
Query: 25 QLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHT 84
+L +QY + + + Q ++ PE+ R ++ R+ E E E+ R RE
Sbjct: 1075 ELERQYRKEE---ELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKR 1131
Query: 85 TSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQ 144
+ ++ R E+E+ ++E + L E EK +++ E Q
Sbjct: 1132 RRQELERQYR------------------EEEEVQQEEEQ----LLREEPEKRRRQELERQ 1169
Query: 145 ARKEQEQKAEEERIRME 161
R+E+E + EEE++ E
Sbjct: 1170 YREEEELQQEEEQLLRE 1186
Score = 38.5 bits (88), Expect = 0.005
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 28 KQYSSRD-LPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTS 86
+QY +D L + R+ + + R R +R E EE ++ + +R TR
Sbjct: 1018 RQYRKKDELQQEEEQLLREEREKRRLQERERQYREE-EELQQEEEQLLGEERETRRRQEL 1076
Query: 87 SSVSKKPRLDQIPAANLDADDPLTDEEDEDF-----EEESDDDDTAALLAELEKIKKERA 141
+K Q L ++P E EEE ++ L E EK +++
Sbjct: 1077 ERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQEL 1136
Query: 142 EEQARKEQEQKAEEERIRME 161
E Q R+E+E + EEE++ E
Sbjct: 1137 ERQYREEEEVQQEEEQLLRE 1156
Score = 37.0 bits (84), Expect = 0.014
Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 42 KYRQTTQDAPEEVRNRDFRRE---LEERERAAAREKNRDRPTREHTTSSSVSKKPRL--- 95
K+ + Q + R R F +E L +ER R ++RDR RE ++ +L
Sbjct: 1516 KFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQ 1575
Query: 96 DQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAEL--EKIKKERAEEQARKEQEQKA 153
++ L+ E++ F E+ +L E+ +K R +EQ +E+E++
Sbjct: 1576 ERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQ 1635
Query: 154 EEERIRMENILSGNPLLNLTGPSQPQANFKVKR-RWDDDVVFKNCAKGVDDQKKDKRFVN 212
+ R L P L Q + + ++ R ++ ++ + + + Q++D++F
Sbjct: 1636 LHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQERDRKFRE 1695
Query: 213 D---TLRSEFHKKFMEK 226
+ R E +KF+++
Sbjct: 1696 EEQQLRRQERERKFLQE 1712
Score = 35.8 bits (81), Expect = 0.031
Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 28 KQYSSRDLPSHTK---IKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHT 84
KQ RD + +K + + +E R + RRE EER + + + ++
Sbjct: 473 KQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRL 532
Query: 85 TSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDD----DTAALLAELEKIKKER 140
S ++ + ++ + L EE++ E+E + + +L K ++ER
Sbjct: 533 RSEQQLRREQEER-------REQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEER 585
Query: 141 AEEQARKEQEQKAEEERIRMENI 163
+++ ++EQE++ E+R++ E +
Sbjct: 586 RQQRLKREQEERL-EQRLKREEV 607
Score = 35.4 bits (80), Expect = 0.041
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 44 RQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANL 103
RQ + + +R R +E ER +E+ R++ R ++ R +Q
Sbjct: 290 RQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERR-- 347
Query: 104 DADDPLTDEEDEDFEE-----ESDDDDTAALLAELEKIKKE---RAEEQARKEQEQKAEE 155
+ L E++E+ E E +++ L +++++E R E+Q R+EQ+ + E+
Sbjct: 348 --EQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQ 405
Query: 156 ERIRMENI 163
+ R + +
Sbjct: 406 QLRREQQL 413
Score = 35.4 bits (80), Expect = 0.041
Identities = 33/181 (18%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 40 KIKYRQTTQDAPEEVRN-RDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQI 98
++K ++ + + +R+ + RRE EER + + R +E R ++
Sbjct: 518 RLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQER----------REQRL 567
Query: 99 PAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEE-ER 157
+ D L E+E ++ + L L++ + ER E++ R+EQ K EE E
Sbjct: 568 KREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEE 627
Query: 158 IRMENILSGNP-----LLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVN 212
R + +L L Q + ++KR +++ + + + +++++++
Sbjct: 628 ERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAE 687
Query: 213 D 213
+
Sbjct: 688 E 688
Score = 35.4 bits (80), Expect = 0.041
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 42 KYRQTTQDAPEEVRNRDFRRE---LEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQI 98
K+ + Q +E R+R FR E L+ERE + RDR E + ++ R +
Sbjct: 1447 KFLEEEQQLRQE-RHRKFREEEQLLQEREEQQLHRQERDRKFLEE--EQQLRRQERDRKF 1503
Query: 99 PAANLDADDPLTDEEDEDFEEESD---DDDTAALLAELEKIKKERAEEQARKEQEQK-AE 154
L + +P E + EEE L E ++++++ +Q R+++++K E
Sbjct: 1504 REQELRSQEP----ERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFRE 1559
Query: 155 EERIRME 161
EE++R E
Sbjct: 1560 EEQLRQE 1566
Score = 35.0 bits (79), Expect = 0.053
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 55 RNRDFRRELE-ERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEE 113
R + RRE + RE+ RE+ +R ++H + R + L ++ E
Sbjct: 409 REQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHE 468
Query: 114 DEDF-------EEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
E +EE + L E + ++ER E+Q R+EQE++ E+ R E
Sbjct: 469 QERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQE 523
Score = 34.7 bits (78), Expect = 0.070
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 48 QDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADD 107
Q +E R + +RE EER RE+ +R +E +K +L +
Sbjct: 436 QKHEQERREQRLKREQEERRDWLKREEETERHEQER-------RKQQLKR---------- 478
Query: 108 PLTDEEDE------DFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
D+E+E EEE + +L + ++ER E++ ++++E++ ++R+R E
Sbjct: 479 ---DQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSE 535
Query: 162 NIL 164
L
Sbjct: 536 QQL 538
Score = 33.9 bits (76), Expect = 0.12
Identities = 27/145 (18%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 20 EGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEER-ERAAAREKNRDR 78
E L +L +Q R+ + + R + + + R + EER E+ RE+ +R
Sbjct: 275 EEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEER 334
Query: 79 PTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKK 138
++ ++ +L + ++E+E E++ + +L + ++
Sbjct: 335 REQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQ 394
Query: 139 ERAEEQARKEQEQKAEEERIRMENI 163
R E+Q R+EQ+ + E++ R + +
Sbjct: 395 LRREQQLRREQQLRREQQLRREQQL 419
Score = 32.3 bits (72), Expect = 0.35
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 10/127 (7%)
Query: 42 KYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAA 101
+ ++ ++ E + R R E+E E+ RE+ R E + K ++
Sbjct: 586 RQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQ 645
Query: 102 NLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
L + E+ EEE + + +++K+E EE R+EQE EE+ E
Sbjct: 646 QLRREQQERREQRLKREEEEERLE--------QRLKREHEEE--RREQELAEEEQEQARE 695
Query: 162 NILSGNP 168
I S P
Sbjct: 696 RIKSRIP 702
Score = 31.2 bits (69), Expect = 0.77
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 48 QDAPEEVRNRDFR---RELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLD 104
QD +E R F R+LEE R+K +++ K+ RL+Q D
Sbjct: 111 QDRRQEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQRDRQRRD 170
Query: 105 ADDPLTDEEDEDFEEESDDDD--------TAALLAELEKIKKERAEEQARKEQEQKAEEE 156
+ +E ++ EE +++ + E++++ E RK +E+K ++
Sbjct: 171 EELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQR 230
Query: 157 RIRMENI 163
R R + +
Sbjct: 231 RERQDRV 237
Score = 29.3 bits (64), Expect = 2.9
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 42 KYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAA 101
+YR+ + EE + RE R+ + + + +E + R Q
Sbjct: 1049 QYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERER 1108
Query: 102 NLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
++ L EE++ EE + ELE+ +E E Q +EQ + E E+ R +
Sbjct: 1109 QCREEEELQQEEEQLLREEREKRRRQ----ELERQYREEEEVQQEEEQLLREEPEKRRRQ 1164
Query: 162 NI 163
+
Sbjct: 1165 EL 1166
Score = 28.5 bits (62), Expect = 5.0
Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 20/168 (11%)
Query: 25 QLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHT 84
+L +QY + + + Q ++ PE+ R ++ R+ E E E+ R +E
Sbjct: 1135 ELERQYREEE---EVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKR 1191
Query: 85 TSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQ 144
+ +++ + + + D+D + L + E K+ +
Sbjct: 1192 RQERERQYREEEEL-------------QRQKRKQRYRDEDQRSDLKWQWEPEKENAVRDN 1238
Query: 145 A----RKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKRRW 188
+E EQ + E ++ + S L +L G Q + + +RRW
Sbjct: 1239 KVYCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRW 1286
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 40.8 bits (94), Expect = 0.001
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 30/181 (16%)
Query: 16 RGKGEGDLSQLSKQYS----SRDLP---SHTKIKYRQTTQDAPEEVRNRDFRRELEERER 68
RG+G+ Q S+ S SR P SH++ R + + R+R+ R+ ++ +R
Sbjct: 88 RGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKR 147
Query: 69 AAAREKNRDRPTREHTTSSSVSKKPRLDQIPAAN-------------LDADDPL-TDEED 114
++K +D+ S + K L+ +P A AD+ L E +
Sbjct: 148 EKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERN 207
Query: 115 EDFEEESDDDDTAALLAELEKIKKERAEE---------QARKEQEQKAEEERIRMENILS 165
E+ + ++D A L+ +++++K+ A E ++ KE ++ E ++ S
Sbjct: 208 EEEAKRRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTS 267
Query: 166 G 166
G
Sbjct: 268 G 268
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 40.8 bits (94), Expect = 0.001
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 52 EEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTD 111
EE + +E + ER K R + + T VSK P D L D
Sbjct: 12 EEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPE---------DKKKRLED 62
Query: 112 EEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
++ + ++E D + AE E KKE E++ +E+E+K +EE+ + +
Sbjct: 63 DKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 61 RELEERERAAAREKNRDR---PTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDF 117
++ ER +++E+ +D ++ + + KK RL+ D + DEE
Sbjct: 23 KDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKA 82
Query: 118 EEESDDDDTAALLAELEKIKKERAEEQARKEQEQKA------EEERIRM-------ENIL 164
EEES + E+ +K++ EEQA+++QE++A +EE I++ ++
Sbjct: 83 EEESKKKEEEEKKKHQEEERKKQ-EEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLR 141
Query: 165 SGNPLLNLTGP-SQPQANF--KVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHK 221
N P S+P+ NF ++ + F K + +Q++ D+L +F+
Sbjct: 142 KELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKTITEQQR------DSLSHDFNG 195
Query: 222 KFMEKYI 228
+ KYI
Sbjct: 196 LNLSKYI 202
Score = 27.7 bits (60), Expect = 8.5
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 104 DADDPLTDEE--DEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
D+ D +T+ E +ED EEE +T ++ + EE + + ++ EEE +
Sbjct: 1018 DSKDSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTD 1077
Query: 162 NILSGN 167
+ N
Sbjct: 1078 YLTDSN 1083
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 40.8 bits (94), Expect = 0.001
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 52 EEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTD 111
EE + +E + ER K R + + T VSK P D L D
Sbjct: 12 EEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPE---------DKKKRLED 62
Query: 112 EEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
++ + ++E D + AE E KKE E++ +E+E+K +EE+ + +
Sbjct: 63 DKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQ 112
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 61 RELEERERAAAREKNRDR---PTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDF 117
++ ER +++E+ +D ++ + + KK RL+ D + DEE
Sbjct: 23 KDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKA 82
Query: 118 EEESDDDDTAALLAELEKIKKERAEEQARKEQEQKA------EEERIRM-------ENIL 164
EEES + E+ +K++ EEQA+++QE++A +EE I++ ++
Sbjct: 83 EEESKKKEEEEKKKHQEEERKKQ-EEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLR 141
Query: 165 SGNPLLNLTGP-SQPQANF--KVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHK 221
N P S+P+ NF ++ + F K + +Q++ D+L +F+
Sbjct: 142 KELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKTITEQQR------DSLSHDFNG 195
Query: 222 KFMEKYI 228
+ KYI
Sbjct: 196 LNLSKYI 202
Score = 27.7 bits (60), Expect = 8.5
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 104 DADDPLTDEE--DEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRME 161
D+ D +T+ E +ED EEE +T ++ + EE + + ++ EEE +
Sbjct: 1018 DSKDSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTD 1077
Query: 162 NILSGN 167
+ N
Sbjct: 1078 YLTDSN 1083
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 40.8 bits (94), Expect = 0.001
Identities = 30/165 (18%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 45 QTTQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLDQIPAANLD 104
+++Q + EEV + ++ + E ++ E+ + E V + +++ + +
Sbjct: 165 RSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEE 224
Query: 105 ADDPLTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENIL 164
D+ +EE+E+ EEE ++++ +E EQ ++Q+++ + R E
Sbjct: 225 VDEDGEEEEEEEEEEEEEEEE------------EEEEYEQDERDQKEEGNDYDTRSEASD 272
Query: 165 SGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKR 209
SG+ ++ T D V + G D++KK+++
Sbjct: 273 SGSESVSFT---------------DGSVRSGSGTDGSDEKKKERK 302
Score = 36.6 bits (83), Expect = 0.018
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 23 LSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFRRELEERERAAA------REKNR 76
LS + + ++ P T ++ R + A + R LE RA+ E N
Sbjct: 117 LSSSASREPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNS 176
Query: 77 DRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDEDFEEESDDDDTAALLAELEKI 136
+ +H T SS S + + ++ + EEDE+ EE++++D+ E E+
Sbjct: 177 EEYGSDHETGSSGSSDEQGNNTENEEEGVEEDV--EEDEEVEEDAEEDEEVDEDGEEEE- 233
Query: 137 KKERAEEQARKEQEQKAEEE 156
+E EE+ +E+E++ E+
Sbjct: 234 -EEEEEEEEEEEEEEEEYEQ 252
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,336,858
Number of Sequences: 37866
Number of extensions: 476465
Number of successful extensions: 11935
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 635
Number of HSP's that attempted gapping in prelim test: 5130
Number of HSP's gapped (non-prelim): 4048
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.