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Search of human proteins with 11641269
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11641269 dipeptidase 2 precursor [Homo sapiens]
(486 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11641269 dipeptidase 2 precursor [Homo sapiens] 972 0.0
gi|193211608 dipeptidase 3 isoform a [Homo sapiens] 649 0.0
gi|193211610 dipeptidase 3 isoform b [Homo sapiens] 642 0.0
gi|189458885 dipeptidase 1 [Homo sapiens] 363 e-100
gi|4758190 dipeptidase 1 [Homo sapiens] 363 e-100
gi|54234057 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans... 33 0.45
gi|110347431 latent transforming growth factor beta binding prot... 33 0.45
gi|110347463 human immunodeficiency virus type I enhancer bindin... 33 0.76
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 32 1.7
gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens] 31 2.9
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 30 3.8
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 30 3.8
gi|10834994 interleukin 11 precursor [Homo sapiens] 30 4.9
gi|189339239 hypothetical protein LOC55009 [Homo sapiens] 30 4.9
gi|45267839 mesoderm induction early response 1, family member 2... 30 4.9
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 30 6.4
gi|116284392 mucin 2 precursor [Homo sapiens] 30 6.4
gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1 [... 30 6.4
gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2 [... 30 6.4
gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3 [... 30 6.4
gi|7662176 ProSAPiP1 protein [Homo sapiens] 30 6.4
gi|45387951 transmembrane protein 108 [Homo sapiens] 30 6.4
gi|210147493 transmembrane protein 108 [Homo sapiens] 30 6.4
gi|66773344 hypothetical protein LOC140710 [Homo sapiens] 30 6.4
gi|74315354 transient receptor potential cation channel, subfami... 29 8.4
gi|74315352 transient receptor potential cation channel, subfami... 29 8.4
gi|74315350 transient receptor potential cation channel, subfami... 29 8.4
gi|74315348 transient receptor potential cation channel, subfami... 29 8.4
gi|169216272 PREDICTED: hypothetical protein [Homo sapiens] 29 8.4
gi|169216572 PREDICTED: hypothetical protein [Homo sapiens] 29 8.4
>gi|11641269 dipeptidase 2 precursor [Homo sapiens]
Length = 486
Score = 972 bits (2513), Expect = 0.0
Identities = 486/486 (100%), Positives = 486/486 (100%)
Query: 1 MQPSGLEGPGTFGRWPLLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAP 60
MQPSGLEGPGTFGRWPLLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAP
Sbjct: 1 MQPSGLEGPGTFGRWPLLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAP 60
Query: 61 STTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNFSYGQTSLD 120
STTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNFSYGQTSLD
Sbjct: 61 STTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNFSYGQTSLD 120
Query: 121 RLRDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSAKALNDTQK 180
RLRDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSAKALNDTQK
Sbjct: 121 RLRDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSAKALNDTQK 180
Query: 181 LACLIGVEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSFYNNISGLT 240
LACLIGVEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSFYNNISGLT
Sbjct: 181 LACLIGVEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSFYNNISGLT 240
Query: 241 DFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSARNVPDDIL 300
DFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSARNVPDDIL
Sbjct: 241 DFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSARNVPDDIL 300
Query: 301 QLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQ 360
QLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQ
Sbjct: 301 QLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQ 360
Query: 361 GLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLEDKFPDE 420
GLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLEDKFPDE
Sbjct: 361 GLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLEDKFPDE 420
Query: 421 QLSSSCHSDLSRLRQRQSLTSGQELTEIPIHWTAKLPAKWSVSESSPHMAPVLAVVATFP 480
QLSSSCHSDLSRLRQRQSLTSGQELTEIPIHWTAKLPAKWSVSESSPHMAPVLAVVATFP
Sbjct: 421 QLSSSCHSDLSRLRQRQSLTSGQELTEIPIHWTAKLPAKWSVSESSPHMAPVLAVVATFP 480
Query: 481 VLILWL 486
VLILWL
Sbjct: 481 VLILWL 486
>gi|193211608 dipeptidase 3 isoform a [Homo sapiens]
Length = 513
Score = 649 bits (1673), Expect = 0.0
Identities = 344/494 (69%), Positives = 392/494 (79%), Gaps = 15/494 (3%)
Query: 1 MQPSGLEGPGTFGRWPLLSLLLLLLLL---QPVTCAYTTPGPPRALTTLGAPRAHTMPG- 56
MQP+G EG R L LLLLLLLL QPVT A TTPG PRAL+TLG+P T PG
Sbjct: 26 MQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGAPRALSTLGSPSLFTTPGV 85
Query: 57 ----TYAPSTTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNF 112
T TT +P T L+ +A+ALMR FPLVDGHNDLP VLRQ Y+ LQDVNLRNF
Sbjct: 86 PSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNF 145
Query: 113 SYGQTSLDRLRDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSA 172
S+GQTSLDRLRDGLVGAQFWSA V CQ+QD+ A+RL LEQIDLI RMCASYSELELVTSA
Sbjct: 146 SHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSA 205
Query: 173 KALNDTQKLACLIGVEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSF 232
+ LN +QKLACLIGVEGGHSLD+SLS+LR+FY+LGVRYLTLT TC+TPWAESS K H
Sbjct: 206 EGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHM 265
Query: 233 YNNISGLTDFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSA 292
Y N+SGLT FGEKVV E+NRLGMM+DLS+ SD + RR LEVSQAPVIFSHSAAR VC++
Sbjct: 266 YTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNL 325
Query: 293 RNVPDDILQLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDY 352
NVPDDILQLLKKNGG+VMV+LSMGV+QCN ANVSTVADHFDHI+AVIGS+FIGIGG+Y
Sbjct: 326 LNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNY 385
Query: 353 DGAGKFPQGLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSP 412
DG G+FPQGLEDVSTYPVLIEELLSR WSEEELQGVLRGNLLRVFRQVEKV+EE++ QSP
Sbjct: 386 DGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSP 445
Query: 413 LEDKFPDEQLSSSCHSDLSRLRQRQSLTSGQELTEIPIHWTAKLPAKWSVSESSPHMAPV 472
+E +FP QLS+SCHS L + Q + E+T+ P T ++P W S +SP++ P
Sbjct: 446 VEAEFPYGQLSTSCHSHL--VPQNGHQATHLEVTKQP---TNRVP--WRSSNASPYLVPG 498
Query: 473 LAVVATFPVLILWL 486
L AT P WL
Sbjct: 499 LVAAATIPTFTQWL 512
>gi|193211610 dipeptidase 3 isoform b [Homo sapiens]
Length = 512
Score = 642 bits (1656), Expect = 0.0
Identities = 343/494 (69%), Positives = 391/494 (79%), Gaps = 16/494 (3%)
Query: 1 MQPSGLEGPGTFGRWPLLSLLLLLLLL---QPVTCAYTTPGPPRALTTLGAPRAHTMPG- 56
MQP+G EG R L LLLLLLLL QPVT A TTPG PRAL+TLG+P T PG
Sbjct: 26 MQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGAPRALSTLGSPSLFTTPGV 85
Query: 57 ----TYAPSTTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNF 112
T TT +P T L+ +A+ALMR FPLVDGHNDLP VLRQ Y+ LQDVNLRNF
Sbjct: 86 PSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNF 145
Query: 113 SYGQTSLDRLRDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSA 172
S+GQTSLDRLRDGLVGAQFWSA V CQ+QD+ A+RL LEQIDLI RMCASYSELELVTSA
Sbjct: 146 SHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSA 205
Query: 173 KALNDTQKLACLIGVEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSF 232
+ LN +QKLACLIGVEGGHSLD+SLS+LR+FY+LGVRYLTLT TC+TPWAESS K H
Sbjct: 206 EGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHM 265
Query: 233 YNNISGLTDFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSA 292
Y N+SGLT FGEKVV E+NRLGMM+DLS+ SD + RR LEVSQAPVIFSHSAAR VC++
Sbjct: 266 YTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNL 325
Query: 293 RNVPDDILQLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDY 352
NVPDDILQLL KNGG+VMV+LSMGV+QCN ANVSTVADHFDHI+AVIGS+FIGIGG+Y
Sbjct: 326 LNVPDDILQLL-KNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNY 384
Query: 353 DGAGKFPQGLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSP 412
DG G+FPQGLEDVSTYPVLIEELLSR WSEEELQGVLRGNLLRVFRQVEKV+EE++ QSP
Sbjct: 385 DGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSP 444
Query: 413 LEDKFPDEQLSSSCHSDLSRLRQRQSLTSGQELTEIPIHWTAKLPAKWSVSESSPHMAPV 472
+E +FP QLS+SCHS L + Q + E+T+ P T ++P W S +SP++ P
Sbjct: 445 VEAEFPYGQLSTSCHSHL--VPQNGHQATHLEVTKQP---TNRVP--WRSSNASPYLVPG 497
Query: 473 LAVVATFPVLILWL 486
L AT P WL
Sbjct: 498 LVAAATIPTFTQWL 511
>gi|189458885 dipeptidase 1 [Homo sapiens]
Length = 411
Score = 363 bits (932), Expect = e-100
Identities = 184/362 (50%), Positives = 245/362 (67%), Gaps = 8/362 (2%)
Query: 73 QEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQD--VNLRNFSYGQTSLDRLRDGLVGAQ 130
+++A +MRD P++DGHNDLP L ++ LQD NL + T++ +LR G VG Q
Sbjct: 20 RDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQ 79
Query: 131 FWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELEL-VTSAKALNDT---QKLACLIG 186
FWS Y PC TQ++DA+R TLEQ+D++ RMC Y E L VTS+ + K+A LIG
Sbjct: 80 FWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIG 139
Query: 187 VEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSFYNNISGLTDFGEKV 246
VEGGHS+D+SL +LR Y LG+RYLTLTH+CNTPWA++ GL+ FG++V
Sbjct: 140 VEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRV 199
Query: 247 VAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSARNVPDDILQLLKKN 306
V E+NRLG+++DL+HVS A + L++S+APVIFSHS+A VC S RNVPDD+L+L+K+
Sbjct: 200 VKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQT 259
Query: 307 GGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVS 366
+VMV+ I C AN+S VADH DHIK V G++ +G GGD+DG + P+GLEDVS
Sbjct: 260 DSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVS 319
Query: 367 TYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLEDKFPDEQLSSSC 426
YP LI ELL R W+E E++G L NLLRVF VE Q N Q+P E+ P +QL SC
Sbjct: 320 KYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVE--QASNLTQAPEEEPIPLDQLGGSC 377
Query: 427 HS 428
+
Sbjct: 378 RT 379
>gi|4758190 dipeptidase 1 [Homo sapiens]
Length = 411
Score = 363 bits (932), Expect = e-100
Identities = 184/362 (50%), Positives = 245/362 (67%), Gaps = 8/362 (2%)
Query: 73 QEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQD--VNLRNFSYGQTSLDRLRDGLVGAQ 130
+++A +MRD P++DGHNDLP L ++ LQD NL + T++ +LR G VG Q
Sbjct: 20 RDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQ 79
Query: 131 FWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELEL-VTSAKALNDT---QKLACLIG 186
FWS Y PC TQ++DA+R TLEQ+D++ RMC Y E L VTS+ + K+A LIG
Sbjct: 80 FWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIG 139
Query: 187 VEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSFYNNISGLTDFGEKV 246
VEGGHS+D+SL +LR Y LG+RYLTLTH+CNTPWA++ GL+ FG++V
Sbjct: 140 VEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRV 199
Query: 247 VAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSARNVPDDILQLLKKN 306
V E+NRLG+++DL+HVS A + L++S+APVIFSHS+A VC S RNVPDD+L+L+K+
Sbjct: 200 VKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQT 259
Query: 307 GGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVS 366
+VMV+ I C AN+S VADH DHIK V G++ +G GGD+DG + P+GLEDVS
Sbjct: 260 DSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVS 319
Query: 367 TYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLEDKFPDEQLSSSC 426
YP LI ELL R W+E E++G L NLLRVF VE Q N Q+P E+ P +QL SC
Sbjct: 320 KYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVE--QASNLTQAPEEEPIPLDQLGGSC 377
Query: 427 HS 428
+
Sbjct: 378 RT 379
>gi|54234057 ST8 alpha-N-acetyl-neuraminide
alpha-2,8-sialyltransferase 6 [Homo sapiens]
Length = 398
Score = 33.5 bits (75), Expect = 0.45
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 17 LLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPST 69
LL+ LLLLLLL+ + C PG R L H GT A TL SP+T
Sbjct: 10 LLASLLLLLLLRLLWCPADAPGRARILVEESREATH---GTPAALRTLRSPAT 59
>gi|110347431 latent transforming growth factor beta binding
protein 4 isoform a [Homo sapiens]
Length = 1624
Score = 33.5 bits (75), Expect = 0.45
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 9 PGTFGRWPLLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAP 49
PGT GR PLL +LLL L + A +P P + + G P
Sbjct: 4 PGTSGRRPLLLVLLLPLFAAATSAASPSPSPSQVVEVPGVP 44
>gi|110347463 human immunodeficiency virus type I enhancer binding
protein 2 [Homo sapiens]
Length = 2446
Score = 32.7 bits (73), Expect = 0.76
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 295 VPDDILQLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIG----- 349
VP I + G V+ S+S + Q +P+ + V ++ V + GIG
Sbjct: 1334 VPVRIQTHVPSYGSVMYTSISQILGQNSPAIVICKVDENMTQRTLVTNAAMQGIGFNIAQ 1393
Query: 350 --GDYDGAGKFP---------QGLEDVSTYPVLI----EELLSRGWSEEELQGVLRGNLL 394
G + G K+P GLE S+ P+ + + + + G S+ L L
Sbjct: 1394 VLGQHAGLEKYPIWKAPQTLPLGLE--SSIPLCLPSTSDSVATLGGSKRMLSPASSLELF 1451
Query: 395 RVFRQVEKVQEENKWQSPLEDKFPDEQLSSSCHSDLSRLRQRQSLTSG 442
+Q ++V+EE + +E+ E +S DLSR ++ Q + G
Sbjct: 1452 METKQQKRVKEEKMYGQIVEELSAVELTNSDIKKDLSRPQKPQLVRQG 1499
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 31.6 bits (70), Expect = 1.7
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 14 RWPLLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQ 70
++ L S L+LL+LL + A P R+ TL APR PG + + SPS+Q
Sbjct: 5 QYALTSSLVLLVLL---STARAGPFSSRSNVTLPAPRPPPQPGGHTVGAGVGSPSSQ 58
>gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens]
Length = 1462
Score = 30.8 bits (68), Expect = 2.9
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 4 SGLEGPGTFGRWPLLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAPSTT 63
+G PG G + LL L +P+ + P PRA T PR+ ++ G P +
Sbjct: 505 AGSSAPGIGGAAEEVGKTLLSLEGKPLEASRALPAKPRAFTLY--PRSFSVEGREIPVSV 562
Query: 64 LSSPSTQGLQE 74
P GL +
Sbjct: 563 YQEPEGSGLDD 573
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 30.4 bits (67), Expect = 3.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 37 PGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQGLQ 73
PGPP + G P H MPG + P +GLQ
Sbjct: 1120 PGPPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQ 1156
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 30.4 bits (67), Expect = 3.8
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 25 LLLQPVTCAYTT----PGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQGLQ 73
LL +PV+ + P PP T +P A PG +PS + SS ST+ LQ
Sbjct: 1932 LLSKPVSSLFQNWPKPPLPPLPTGTGVSPTAAAAPGATSPSASSSSTSTRHLQ 1984
>gi|10834994 interleukin 11 precursor [Homo sapiens]
Length = 199
Score = 30.0 bits (66), Expect = 4.9
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 20 LLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQGLQEQARAL 79
L+L++L L P T PGPP G PR P ST L + S Q A
Sbjct: 7 LVLVVLSLWPDTAV--APGPPP-----GPPRVSPDPRAELDSTVLLTRSLLADTRQLAAQ 59
Query: 80 MRD-FPLVDGHN 90
+RD FP HN
Sbjct: 60 LRDKFPADGDHN 71
>gi|189339239 hypothetical protein LOC55009 [Homo sapiens]
Length = 132
Score = 30.0 bits (66), Expect = 4.9
Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 16 PLLSLLLLLLLLQPVTCAYTTPGPPR-ALTTLGAPRAHT---MPGTYAPSTTLSSPSTQG 71
P L LLLL LLL + C P R A TL P A T PG ST P G
Sbjct: 8 PPLLLLLLALLLAALPCGAEEASPLRPAQVTLSPPPAVTNGSQPGAPHNSTHTRPPGASG 67
Query: 72 LQEQARALMRDFPLVDG 88
AL R F ++ G
Sbjct: 68 -----SALTRSFYVILG 79
>gi|45267839 mesoderm induction early response 1, family member 2
[Homo sapiens]
Length = 545
Score = 30.0 bits (66), Expect = 4.9
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 28 QPVTCAYTTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQGLQEQARALMRDFPLVD 87
+P C++ A+ P A P +Y P+ T P AL ++ PL+
Sbjct: 425 EPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTAPEPDASPRLAVDFALPKELPLIS 484
Query: 88 GHNDL 92
H DL
Sbjct: 485 SHVDL 489
>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
sapiens]
Length = 600
Score = 29.6 bits (65), Expect = 6.4
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 6/121 (4%)
Query: 2 QPSGLEGPGTFGRWPLLSLLLLLLLLQPVTCAYTTP--GPPRALTTLGAPRAHTMP---- 55
Q G + GT+G+ +S AY T PP TT AP+A++ P
Sbjct: 34 QAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGY 93
Query: 56 GTYAPSTTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNFSYG 115
GT A TT ++ +T A++ P + P Q + SY
Sbjct: 94 GTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTSYSSTQPTSYDQSSYS 153
Query: 116 Q 116
Q
Sbjct: 154 Q 154
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 29.6 bits (65), Expect = 6.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 35 TTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPS 68
TTP PP + TT P P T PS ++PS
Sbjct: 1452 TTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPS 1485
>gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1
[Homo sapiens]
Length = 871
Score = 29.6 bits (65), Expect = 6.4
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 379 GWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLED---KFPDEQLSSSCHSDLSRLRQ 435
G ++E + LLR +Q+ K QE+ + Q L + K+ EQ+ S HS L +
Sbjct: 302 GEAKELAEAQREAELLR--KQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELER 359
Query: 436 RQSLTSGQELTE--IPIHWTAKL 456
++ L + Q L E +H TA+L
Sbjct: 360 QKLLETMQHLQEDRDSLHATAEL 382
>gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2
[Homo sapiens]
Length = 835
Score = 29.6 bits (65), Expect = 6.4
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 379 GWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLED---KFPDEQLSSSCHSDLSRLRQ 435
G ++E + LLR +Q+ K QE+ + Q L + K+ EQ+ S HS L +
Sbjct: 266 GEAKELAEAQREAELLR--KQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELER 323
Query: 436 RQSLTSGQELTE--IPIHWTAKL 456
++ L + Q L E +H TA+L
Sbjct: 324 QKLLETMQHLQEDRDSLHATAEL 346
>gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3
[Homo sapiens]
Length = 782
Score = 29.6 bits (65), Expect = 6.4
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 379 GWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSPLED---KFPDEQLSSSCHSDLSRLRQ 435
G ++E + LLR +Q+ K QE+ + Q L + K+ EQ+ S HS L +
Sbjct: 213 GEAKELAEAQREAELLR--KQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELER 270
Query: 436 RQSLTSGQELTE--IPIHWTAKL 456
++ L + Q L E +H TA+L
Sbjct: 271 QKLLETMQHLQEDRDSLHATAEL 293
>gi|7662176 ProSAPiP1 protein [Homo sapiens]
Length = 673
Score = 29.6 bits (65), Expect = 6.4
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 348 IGGDYDGAGKFPQGLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEEN 407
+G G G P + LI+EL R W +E+ LR +L + V +V EE
Sbjct: 297 LGSGEGGGGGLPFAACSPPSPSALIQELEERLWEKEQEVAALRRSLEQSEAAVAQVLEER 356
Query: 408 K--WQSPLEDKFPDEQLSSSCHSDLSRLRQR 436
+ W+ L +L C L ++ +R
Sbjct: 357 QKAWEREL------AELRQGCSGKLQQVARR 381
>gi|45387951 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 29.6 bits (65), Expect = 6.4
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 17 LLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTY--AP-------STTLSSP 67
LLS LL+L L + + A P P +L L + T PGT AP S + +P
Sbjct: 12 LLSFLLILALTEALAFAIQEPSPRESLQVL---PSGTPPGTMVTAPHSSTRHTSVVMLTP 68
Query: 68 STQGLQEQARALM-RDFPLVDGH 89
+ G QA A M P +GH
Sbjct: 69 NPDGPPSQAAAPMATPTPRAEGH 91
>gi|210147493 transmembrane protein 108 [Homo sapiens]
Length = 575
Score = 29.6 bits (65), Expect = 6.4
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 17 LLSLLLLLLLLQPVTCAYTTPGPPRALTTLGAPRAHTMPGTY--AP-------STTLSSP 67
LLS LL+L L + + A P P +L L + T PGT AP S + +P
Sbjct: 12 LLSFLLILALTEALAFAIQEPSPRESLQVL---PSGTPPGTMVTAPHSSTRHTSVVMLTP 68
Query: 68 STQGLQEQARALM-RDFPLVDGH 89
+ G QA A M P +GH
Sbjct: 69 NPDGPPSQAAAPMATPTPRAEGH 91
>gi|66773344 hypothetical protein LOC140710 [Homo sapiens]
Length = 1016
Score = 29.6 bits (65), Expect = 6.4
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 24/99 (24%)
Query: 374 ELLSRGWSEEELQGV--LRGNLLRVFRQVEKVQ----------------------EENKW 409
++ R WS+E+LQ V L+G +V +QV+++Q ++N W
Sbjct: 838 QISERNWSQEKLQLVERLQGEKQQVEQQVKELQNRLSQLQKAADPWVLKHSELEKQDNSW 897
Query: 410 QSPLEDKFPDEQLSSSCHSDLSRLRQRQSLTSGQELTEI 448
+ +K D++ S + L++ +S++S E +
Sbjct: 898 KETRSEKIHDKEAVSEVELGGNGLKRTKSVSSMSEFESL 936
>gi|74315354 transient receptor potential cation channel, subfamily
V, member 1 [Homo sapiens]
Length = 839
Score = 29.3 bits (64), Expect = 8.4
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 327 VSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVSTYPVLIEELLSR 378
++TV +F H+K + S + + + +G + + Y V+IE+++ R
Sbjct: 524 LATVVLYFSHLKEYVASMVFSLALGWTNMLYYTRGFQQMGIYAVMIEKMILR 575
>gi|74315352 transient receptor potential cation channel, subfamily
V, member 1 [Homo sapiens]
Length = 839
Score = 29.3 bits (64), Expect = 8.4
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 327 VSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVSTYPVLIEELLSR 378
++TV +F H+K + S + + + +G + + Y V+IE+++ R
Sbjct: 524 LATVVLYFSHLKEYVASMVFSLALGWTNMLYYTRGFQQMGIYAVMIEKMILR 575
>gi|74315350 transient receptor potential cation channel, subfamily
V, member 1 [Homo sapiens]
Length = 839
Score = 29.3 bits (64), Expect = 8.4
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 327 VSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVSTYPVLIEELLSR 378
++TV +F H+K + S + + + +G + + Y V+IE+++ R
Sbjct: 524 LATVVLYFSHLKEYVASMVFSLALGWTNMLYYTRGFQQMGIYAVMIEKMILR 575
>gi|74315348 transient receptor potential cation channel, subfamily
V, member 1 [Homo sapiens]
Length = 839
Score = 29.3 bits (64), Expect = 8.4
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 327 VSTVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVSTYPVLIEELLSR 378
++TV +F H+K + S + + + +G + + Y V+IE+++ R
Sbjct: 524 LATVVLYFSHLKEYVASMVFSLALGWTNMLYYTRGFQQMGIYAVMIEKMILR 575
>gi|169216272 PREDICTED: hypothetical protein [Homo sapiens]
Length = 753
Score = 29.3 bits (64), Expect = 8.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 18 LSLLLLLLLLQPVT-----CAYTTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQGL 72
LS+L +L L+ + C P RA +TL P +P T +TL+ PST
Sbjct: 240 LSILDILRTLKATSIFEAPCTSKDPRITRARSTLKGPSTTEVPNTLKTLSTLNVPSTSET 299
Query: 73 QEQARAL 79
++AL
Sbjct: 300 VSTSKAL 306
>gi|169216572 PREDICTED: hypothetical protein [Homo sapiens]
Length = 753
Score = 29.3 bits (64), Expect = 8.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 18 LSLLLLLLLLQPVT-----CAYTTPGPPRALTTLGAPRAHTMPGTYAPSTTLSSPSTQGL 72
LS+L +L L+ + C P RA +TL P +P T +TL+ PST
Sbjct: 240 LSILDILRTLKATSIFEAPCTSKDPRITRARSTLKGPSTTEVPNTLKTLSTLNVPSTSET 299
Query: 73 QEQARAL 79
++AL
Sbjct: 300 VSTSKAL 306
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,933,338
Number of Sequences: 37866
Number of extensions: 910994
Number of successful extensions: 3150
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3069
Number of HSP's gapped (non-prelim): 72
length of query: 486
length of database: 18,247,518
effective HSP length: 106
effective length of query: 380
effective length of database: 14,233,722
effective search space: 5408814360
effective search space used: 5408814360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.