Guide to the Human Genome
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Search of human proteins with 239743922

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo
sapiens]
         (339 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755121 PREDICTED: hypothetical protein [Homo sapiens]           699   0.0  
gi|239749649 PREDICTED: hypothetical protein [Homo sapiens]           699   0.0  
gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo ...   699   0.0  
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            39   0.007
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            39   0.007
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]            35   0.073
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]            35   0.073
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]            35   0.073
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]            35   0.096
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]            35   0.096
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]          35   0.096
gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]     35   0.13 
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]            35   0.13 
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ...    35   0.13 
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ...    35   0.13 
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...    34   0.21 
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     34   0.21 
gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo ...    33   0.36 
gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo ...    33   0.36 
gi|239757272 PREDICTED: hypothetical protein [Homo sapiens]            33   0.48 
gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]            33   0.48 
gi|239751775 PREDICTED: hypothetical protein [Homo sapiens]            33   0.48 
gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo ...    33   0.48 
gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo ...    33   0.48 
gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo ...    33   0.48 
gi|88196790 coiled-coil domain containing 88 [Homo sapiens]            33   0.48 
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]         32   0.62 
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]            32   0.81 
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]           32   0.81 
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ...    32   0.81 

>gi|239755121 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 339

 Score =  699 bits (1803), Expect = 0.0
 Identities = 339/339 (100%), Positives = 339/339 (100%)

Query: 1   MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
           MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK
Sbjct: 1   MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60

Query: 61  LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
           LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ
Sbjct: 61  LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120

Query: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
           RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR
Sbjct: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180

Query: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
           VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA
Sbjct: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240

Query: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
           GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR
Sbjct: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300

Query: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
           VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT
Sbjct: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339


>gi|239749649 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 339

 Score =  699 bits (1803), Expect = 0.0
 Identities = 339/339 (100%), Positives = 339/339 (100%)

Query: 1   MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
           MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK
Sbjct: 1   MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60

Query: 61  LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
           LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ
Sbjct: 61  LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120

Query: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
           RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR
Sbjct: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180

Query: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
           VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA
Sbjct: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240

Query: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
           GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR
Sbjct: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300

Query: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
           VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT
Sbjct: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339


>gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo
           sapiens]
          Length = 339

 Score =  699 bits (1803), Expect = 0.0
 Identities = 339/339 (100%), Positives = 339/339 (100%)

Query: 1   MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60
           MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK
Sbjct: 1   MDAADPGDNAVTLWVMQLSGLTGPKSENRARGRSVHAMVPRFPNWTQEQDRGRSYISDIK 60

Query: 61  LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120
           LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ
Sbjct: 61  LEEEIQKASEQVNLILNAPRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQ 120

Query: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180
           RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR
Sbjct: 121 RHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGR 180

Query: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240
           VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA
Sbjct: 181 VLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRA 240

Query: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300
           GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR
Sbjct: 241 GGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGAR 300

Query: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339
           VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT
Sbjct: 301 VQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRRLT 339


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 43/133 (32%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 139 ALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHG 198
           A  G    Q H+A +      G A  G P+ G   Q     RV    + VGAR       
Sbjct: 810 AWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869

Query: 199 QQAPLD----RTVQQHAQGAHQVEDVAARVPR--APAAARPGRRAQRAGGGRAHRQAVQ- 251
           Q A       R    H  GA  ++    R  R  APAAA    +  RA  GRAHR   Q 
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929

Query: 252 RRVHLHAEARPGS 264
              H H   RPG+
Sbjct: 930 APSHRH---RPGA 939



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 30/173 (17%)

Query: 168 VGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQA--PLDRTVQQHAQGAHQVEDVAARVP 225
           V   G QV   G VLV+    G        G  A  PL   V Q  +   +V     RV 
Sbjct: 802 VAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMR-QRRVRAGRRRVG 860

Query: 226 RAPAAARPGRRAQRAGGGRAHRQAVQRRV-HLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
            A A A  GR+   AGGG        RRV H H       +RA C + R          +
Sbjct: 861 -ARAVAAAGRQGAGAGGGG-------RRVRHGHGHGAAVLQRAPCRQQR---------HL 903

Query: 285 PGSAETTAGAWVWGARVQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRR 337
             +A   A   V  A+ +   P     P    R         PG RG R RRR
Sbjct: 904 APAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHR---------PGARGRRSRRR 947


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 43/133 (32%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 139 ALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHG 198
           A  G    Q H+A +      G A  G P+ G   Q     RV    + VGAR       
Sbjct: 810 AWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869

Query: 199 QQAPLD----RTVQQHAQGAHQVEDVAARVPR--APAAARPGRRAQRAGGGRAHRQAVQ- 251
           Q A       R    H  GA  ++    R  R  APAAA    +  RA  GRAHR   Q 
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929

Query: 252 RRVHLHAEARPGS 264
              H H   RPG+
Sbjct: 930 APSHRH---RPGA 939



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 51/173 (29%), Positives = 61/173 (35%), Gaps = 30/173 (17%)

Query: 168 VGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQA--PLDRTVQQHAQGAHQVEDVAARVP 225
           V   G QV   G VLV+    G        G  A  PL   V Q  +   +V     RV 
Sbjct: 802 VAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMR-QRRVRAGRRRVG 860

Query: 226 RAPAAARPGRRAQRAGGGRAHRQAVQRRV-HLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
            A A A  GR+   AGGG        RRV H H       +RA C + R          +
Sbjct: 861 -ARAVAAAGRQGAGAGGGG-------RRVRHGHGHGAAVLQRAPCRQQR---------HL 903

Query: 285 PGSAETTAGAWVWGARVQWLDPRGSRRPLLESRRREDGGGREPGIRGTRRRRR 337
             +A   A   V  A+ +   P     P    R         PG RG R RRR
Sbjct: 904 APAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHR---------PGARGRRSRRR 947


>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 28/145 (19%)

Query: 149 HQAHLPWPRAVGAAPGGLPVGGGGGQVE-------ALGRVLVEE-QLVGARDDQT----- 195
           HQ  LP   A+    GG   GGGG +           GR      +L+G+ +  T     
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247

Query: 196 -KHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRV 254
            +HGQ +     V+  ++G      V+       AAARP R     GG R HR+A  R  
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVS-------AAARPTR-----GGARGHRRADGRAR 295

Query: 255 HLHAEARPGSERA--GCGRCRCPRG 277
              A+ R G+  A  G   CR  +G
Sbjct: 296 GGCAQLRAGTPSAPGGLQDCRGRQG 320


>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 28/145 (19%)

Query: 149 HQAHLPWPRAVGAAPGGLPVGGGGGQVE-------ALGRVLVEE-QLVGARDDQT----- 195
           HQ  LP   A+    GG   GGGG +           GR      +L+G+ +  T     
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247

Query: 196 -KHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRV 254
            +HGQ +     V+  ++G      V+       AAARP R     GG R HR+A  R  
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVS-------AAARPTR-----GGARGHRRADGRAR 295

Query: 255 HLHAEARPGSERA--GCGRCRCPRG 277
              A+ R G+  A  G   CR  +G
Sbjct: 296 GGCAQLRAGTPSAPGGLQDCRGRQG 320


>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 28/145 (19%)

Query: 149 HQAHLPWPRAVGAAPGGLPVGGGGGQVE-------ALGRVLVEE-QLVGARDDQT----- 195
           HQ  LP   A+    GG   GGGG +           GR      +L+G+ +  T     
Sbjct: 188 HQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAAL 247

Query: 196 -KHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRV 254
            +HGQ +     V+  ++G      V+       AAARP R     GG R HR+A  R  
Sbjct: 248 ARHGQLSRPHAAVRNSSRGRGAATSVS-------AAARPTR-----GGARGHRRADGRAR 295

Query: 255 HLHAEARPGSERA--GCGRCRCPRG 277
              A+ R G+  A  G   CR  +G
Sbjct: 296 GGCAQLRAGTPSAPGGLQDCRGRQG 320


>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 35.0 bits (79), Expect = 0.096
 Identities = 50/189 (26%), Positives = 63/189 (33%), Gaps = 18/189 (9%)

Query: 128 VLRAP-TDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQ 186
           VLR P   + A AL     P         P      P   P GG  G VEA         
Sbjct: 52  VLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAAS------- 104

Query: 187 LVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAH 246
             G    Q +  ++ P      + A G  +    AA +       R GRR  R G G +H
Sbjct: 105 --GEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGSGWSH 162

Query: 247 RQAVQRRVHLHAEAR----PGSERAG-CGRCRCPRGYWRDSWIPGSAETTAGAWVWGARV 301
               +      + A     PGS R G  GR   PR   R+   P    +T  A  +  R 
Sbjct: 163 GHTARVGGTGDSSAGLTTFPGSSRGGFSGREEEPR---RERRQPSLQRSTPPAPTYSPRS 219

Query: 302 QWLDPRGSR 310
              DP   R
Sbjct: 220 DPRDPAAPR 228


>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 35.0 bits (79), Expect = 0.096
 Identities = 50/189 (26%), Positives = 63/189 (33%), Gaps = 18/189 (9%)

Query: 128 VLRAP-TDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQ 186
           VLR P   + A AL     P         P      P   P GG  G VEA         
Sbjct: 52  VLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAAS------- 104

Query: 187 LVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAH 246
             G    Q +  ++ P      + A G  +    AA +       R GRR  R G G +H
Sbjct: 105 --GEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGSGWSH 162

Query: 247 RQAVQRRVHLHAEAR----PGSERAG-CGRCRCPRGYWRDSWIPGSAETTAGAWVWGARV 301
               +      + A     PGS R G  GR   PR   R+   P    +T  A  +  R 
Sbjct: 163 GHTARVGGTGDSSAGLTTFPGSSRGGFSGREEEPR---RERRQPSLQRSTPPAPTYSPRS 219

Query: 302 QWLDPRGSR 310
              DP   R
Sbjct: 220 DPRDPAAPR 228


>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
          Length = 770

 Score = 35.0 bits (79), Expect = 0.096
 Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 24/122 (19%)

Query: 93  ICSETAPGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAP--TDAEAQALVG---LGTPQ 147
           IC++  P   F+ QE           HQ+ V A AV RA   T AE  A++G   L    
Sbjct: 88  ICAQVIP---FLSQE-----------HQQQV-AQAVERAKQVTMAELNAIIGQQQLQAQH 132

Query: 148 THQAHLP----WPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQAPL 203
               H P     P   G  P G+P  GG   + AL   L  +  +  +DD+  H  +   
Sbjct: 133 LSHGHGPPVPLTPHPSGLQPPGIPPLGGSAGLLALSSALSGQSHLAIKDDKKHHDAEHHR 192

Query: 204 DR 205
           DR
Sbjct: 193 DR 194


>gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]
          Length = 498

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 6/92 (6%)

Query: 158 AVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQV 217
           A  AAP G   GGGGG+ E L     ++ L G +D   K  +   + +  ++  +G H+ 
Sbjct: 4   AAAAAPSG---GGGGGEEERLEEKSEDQDLQGLKDKPLKFKK---VKKDKKEEKEGKHEP 57

Query: 218 EDVAARVPRAPAAARPGRRAQRAGGGRAHRQA 249
              +A     PA A     ++ +G   A  +A
Sbjct: 58  VQPSAHHSAEPAEAGKAETSEGSGSAPAVPEA 89


>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 59/205 (28%), Positives = 68/205 (33%), Gaps = 41/205 (20%)

Query: 134 DAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDD 193
           +A    +VG    Q  Q HL     VGA  G L +G  G     + RVL E         
Sbjct: 93  EAHLVDVVGEAVIQLLQLHL----LVGA--GVLELGVDGVGQREVHRVLQEPH------- 139

Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAG-GGRAHRQAVQR 252
               G  AP     Q H +GA  +     R   A A A   R AQ  G GGR+H      
Sbjct: 140 ---PGHAAP-----QAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGA 191

Query: 253 RVHLHAEARP---------GSERAGCGRCRCP-RGYWRDSWIPGSAETTAGAWVWGARVQ 302
           R    A A           G    GCG  R P R  WR    PG         V G    
Sbjct: 192 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWR-GLAPGEEANEGAVGVGGG--- 247

Query: 303 WLDPRGSRRPLLESRRREDGGGREP 327
                 +   L    R E G G +P
Sbjct: 248 -----SAAASLARGPRSESGRGLDP 267


>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
           sapiens]
          Length = 446

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 59/205 (28%), Positives = 68/205 (33%), Gaps = 41/205 (20%)

Query: 134 DAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDD 193
           +A    +VG    Q  Q HL     VGA  G L +G  G     + RVL E         
Sbjct: 242 EAHLVDVVGEAVIQLLQLHL----LVGA--GVLELGVDGVGQREVHRVLQEPH------- 288

Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAG-GGRAHRQAVQR 252
               G  AP     Q H +GA  +     R   A A A   R AQ  G GGR+H      
Sbjct: 289 ---PGHAAP-----QAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGA 340

Query: 253 RVHLHAEARP---------GSERAGCGRCRCP-RGYWRDSWIPGSAETTAGAWVWGARVQ 302
           R    A A           G    GCG  R P R  WR    PG         V G    
Sbjct: 341 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWR-GLAPGEEANEGAVGVGGG--- 396

Query: 303 WLDPRGSRRPLLESRRREDGGGREP 327
                 +   L    R E G G +P
Sbjct: 397 -----SAAASLARGPRSESGRGLDP 416


>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
           sapiens]
          Length = 446

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 59/205 (28%), Positives = 68/205 (33%), Gaps = 41/205 (20%)

Query: 134 DAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDD 193
           +A    +VG    Q  Q HL     VGA  G L +G  G     + RVL E         
Sbjct: 242 EAHLVDVVGEAVIQLLQLHL----LVGA--GVLELGVDGVGQREVHRVLQEPH------- 288

Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAG-GGRAHRQAVQR 252
               G  AP     Q H +GA  +     R   A A A   R AQ  G GGR+H      
Sbjct: 289 ---PGHAAP-----QAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGA 340

Query: 253 RVHLHAEARP---------GSERAGCGRCRCP-RGYWRDSWIPGSAETTAGAWVWGARVQ 302
           R    A A           G    GCG  R P R  WR    PG         V G    
Sbjct: 341 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWR-GLAPGEEANEGAVGVGGG--- 396

Query: 303 WLDPRGSRRPLLESRRREDGGGREP 327
                 +   L    R E G G +P
Sbjct: 397 -----SAAASLARGPRSESGRGLDP 416


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
           [Homo sapiens]
          Length = 593

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 206 TVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSE 265
           T+ Q  Q A Q  +   ++P  P AA PGR        R    A  +R  + A A   + 
Sbjct: 9   TLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAA 68

Query: 266 RAGCGRCRCPRGYWRDSWIPGSAETTA 292
            AG G    P G   +   PGS E  A
Sbjct: 69  AAGLGHPASPGG--SEDGPPGSEEEDA 93


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 62/210 (29%), Positives = 68/210 (32%), Gaps = 27/210 (12%)

Query: 123 VDAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGGQ---VEALG 179
           V A A  RAP  A A A      P +     P PRA  AAP   P              G
Sbjct: 140 VAAAAPARAPRAAAAAATA----PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195

Query: 180 RVLVEEQLVGARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPRAPAAARPG--RRA 237
                   V AR+       Q P     QQ      Q       V RA  AARP   R  
Sbjct: 196 PRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAV-RAGGAARPVSLREV 254

Query: 238 QR------AGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETT 291
            R        GGR  R  VQ  +   A AR   ER   G    PRG       PG A   
Sbjct: 255 VRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGD-----RPGRAPPA 309

Query: 292 AGAWVWGARVQWLDPRGSRRPLLESRRRED 321
           A A    ++      RG    +LE    ED
Sbjct: 310 ASARPSRSK------RGGEERVLEKEEEED 333


>gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo
           sapiens]
          Length = 408

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 47/145 (32%), Positives = 56/145 (38%), Gaps = 22/145 (15%)

Query: 199 QQAPLDRTVQQHAQGAHQVED------VAARVPRAPAAARPGRRAQRAGGGRAHRQAVQR 252
           Q AP  R       GAH++        V+   PR+ A ARPG R  R G   A R   ++
Sbjct: 29  QAAPSKRLESVSFPGAHEMSSRSLARPVSPSAPRSIAPARPGARPPRPGRPLAPR--ARQ 86

Query: 253 RVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGARVQWLDPRGSRRP 312
            V   A  R GS R      R  RG       PG A  +      GAR   L P  + R 
Sbjct: 87  PVPHRAVPRQGSLREPLPSRRGRRG------PPGHAPPSPSLRRRGARA--LQPSAAAR- 137

Query: 313 LLESRRREDGGGR--EPGIRGTRRR 335
              +R R   G R   P  RG  RR
Sbjct: 138 ---ARARVPRGLRLHRPAHRGLPRR 159


>gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo
           sapiens]
          Length = 408

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 47/145 (32%), Positives = 56/145 (38%), Gaps = 22/145 (15%)

Query: 199 QQAPLDRTVQQHAQGAHQVED------VAARVPRAPAAARPGRRAQRAGGGRAHRQAVQR 252
           Q AP  R       GAH++        V+   PR+ A ARPG R  R G   A R   ++
Sbjct: 29  QAAPSKRLESVSFPGAHEMSSRSLARPVSPSAPRSIAPARPGARPPRPGRPLAPR--ARQ 86

Query: 253 RVHLHAEARPGSERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGARVQWLDPRGSRRP 312
            V   A  R GS R      R  RG       PG A  +      GAR   L P  + R 
Sbjct: 87  PVPHRAVPRQGSLREPLPSRRGRRG------PPGHAPPSPSLRRRGARA--LQPSAAAR- 137

Query: 313 LLESRRREDGGGR--EPGIRGTRRR 335
              +R R   G R   P  RG  RR
Sbjct: 138 ---ARARVPRGLRLHRPAHRGLPRR 159


>gi|239757272 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 314

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 9/84 (10%)

Query: 225 PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
           P  P+ A   +  + AGG +   + +  +V LH+  RP SE AG      P      +W 
Sbjct: 12  PPPPSEALAAKELEAAGGAK---EGLDLKVILHSRLRPDSESAGWAISPSP------AWG 62

Query: 285 PGSAETTAGAWVWGARVQWLDPRG 308
                     W W     WL   G
Sbjct: 63  GAPPRALPAVWPWLRGPAWLSVGG 86


>gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 254

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 49/179 (27%), Positives = 64/179 (35%), Gaps = 31/179 (17%)

Query: 119 HQRHV--DAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPR-AVGAAPGGLPVGGGGGQV 175
           H+ HV  +A A  R P             P+  +   P+P   V A PG  PVG G  ++
Sbjct: 47  HESHVLDNAPAAAREPPPPAP-------APRCLRLRPPFPEEGVAARPGSCPVGWGARKL 99

Query: 176 EALGRVLVEEQLV------------GARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAAR 223
           E  G +   E+LV             A       G+ +P  +     AQG  ++     R
Sbjct: 100 EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPR 159

Query: 224 V-------PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCP 275
                   PRAP +      AQ A GGRA   A       H    PG   A   R  CP
Sbjct: 160 APDRGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQCH-PLPPGQSSAERYRALCP 216


>gi|239751775 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 314

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 9/84 (10%)

Query: 225 PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
           P  P+ A   +  + AGG +   + +  +V LH+  RP SE AG      P      +W 
Sbjct: 12  PPPPSEALAAKELEAAGGAK---EGLDLKVILHSRLRPDSESAGWAISPSP------AWG 62

Query: 285 PGSAETTAGAWVWGARVQWLDPRG 308
                     W W     WL   G
Sbjct: 63  GAPPRALPAVWPWLRGPAWLSVGG 86


>gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo
           sapiens]
          Length = 254

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 49/179 (27%), Positives = 64/179 (35%), Gaps = 31/179 (17%)

Query: 119 HQRHV--DAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPR-AVGAAPGGLPVGGGGGQV 175
           H+ HV  +A A  R P             P+  +   P+P   V A PG  PVG G  ++
Sbjct: 47  HESHVLDNAPAAAREPPPPAP-------APRCLRLRPPFPEEGVAARPGSCPVGWGARKL 99

Query: 176 EALGRVLVEEQLV------------GARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAAR 223
           E  G +   E+LV             A       G+ +P  +     AQG  ++     R
Sbjct: 100 EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPR 159

Query: 224 V-------PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCP 275
                   PRAP +      AQ A GGRA   A       H    PG   A   R  CP
Sbjct: 160 APDRGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQCH-PLPPGQSSAERYRALCP 216


>gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo
           sapiens]
          Length = 314

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 9/84 (10%)

Query: 225 PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCPRGYWRDSWI 284
           P  P+ A   +  + AGG +   + +  +V LH+  RP SE AG      P      +W 
Sbjct: 12  PPPPSEALAAKELEAAGGAK---EGLDLKVILHSRLRPDSESAGWAISPSP------AWG 62

Query: 285 PGSAETTAGAWVWGARVQWLDPRG 308
                     W W     WL   G
Sbjct: 63  GAPPRALPAVWPWLRGPAWLSVGG 86


>gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo
           sapiens]
          Length = 254

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 49/179 (27%), Positives = 64/179 (35%), Gaps = 31/179 (17%)

Query: 119 HQRHV--DAHAVLRAPTDAEAQALVGLGTPQTHQAHLPWPR-AVGAAPGGLPVGGGGGQV 175
           H+ HV  +A A  R P             P+  +   P+P   V A PG  PVG G  ++
Sbjct: 47  HESHVLDNAPAAAREPPPPAP-------APRCLRLRPPFPEEGVAARPGSCPVGWGARKL 99

Query: 176 EALGRVLVEEQLV------------GARDDQTKHGQQAPLDRTVQQHAQGAHQVEDVAAR 223
           E  G +   E+LV             A       G+ +P  +     AQG  ++     R
Sbjct: 100 EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPR 159

Query: 224 V-------PRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCRCP 275
                   PRAP +      AQ A GGRA   A       H    PG   A   R  CP
Sbjct: 160 APDRGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQCH-PLPPGQSSAERYRALCP 216


>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
          Length = 1476

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 35/133 (26%), Positives = 49/133 (36%), Gaps = 20/133 (15%)

Query: 156  PRAVGAAPGGLPVGG-GGGQVEALGRVLVEEQLVGARDDQTKHGQQAPLDRT-----VQQ 209
            PR  G  PGGL +G  G G  E+LG     E   G   D T     AP+ R      ++ 
Sbjct: 1326 PRREGGPPGGLRLGADGAGSTESLGGPPETELPEGREADGTGSPSPAPMRRAQSSLCLRD 1385

Query: 210  HAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGC 269
                  Q   +++R P        GR ++    G   RQ  ++R        PG   A  
Sbjct: 1386 ETLAGGQRRKLSSRFP-------VGRSSESFSPGDTPRQRFRQR-------HPGPLGAPV 1431

Query: 270  GRCRCPRGYWRDS 282
               + P   W +S
Sbjct: 1432 SHSKGPGVGWENS 1444


>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
          Length = 547

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 37/120 (30%), Positives = 46/120 (38%), Gaps = 13/120 (10%)

Query: 156 PRAVGAAPGGLPVGGGGG----QVEALGRVL------VEEQLV-GARDDQTKHGQQAPLD 204
           P AV AA  G   GGGGG         GR+L      V  QL+ G++   T+    A   
Sbjct: 31  PPAVAAAGSGNGAGGGGGVGCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTRPPVAAAAA 90

Query: 205 RTVQQHAQGAHQVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGS 264
                   GA +    ++  P  PAAA P  +A RA G         RR        PGS
Sbjct: 91  SLGSLPGPGAARGPSPSSPTP--PAAAAPAEQAPRAKGRPRRSPESHRRSSSPERRSPGS 148


>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 386

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 42/164 (25%), Positives = 56/164 (34%), Gaps = 27/164 (16%)

Query: 98  APGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLP--W 155
           APG    G+    +LS+  W            RA      +   G+G  +  ++  P  W
Sbjct: 136 APGSGLRGRGQRGRLSAATW-------RRGPARAELAGSGRRWWGVGEAREGRSAPPRDW 188

Query: 156 PRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQ----------QAPLDR 205
           P  +G      P GG GG     G V        ARD     G+            P   
Sbjct: 189 PEPLGELRPSAPRGGKGGP--RAGVVAAS----WARDSGPGVGRPVPDLEVAVINGPQPL 242

Query: 206 TVQQHAQGAHQVE--DVAARVPRAPAAARPGRRAQRAGGGRAHR 247
            +  H Q  +  E  +  AR+P  PAA   G R    G GR  R
Sbjct: 243 AICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVR 286


>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
          Length = 847

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 61/251 (24%), Positives = 86/251 (34%), Gaps = 25/251 (9%)

Query: 78  APRAVLFVPESYCFLICSETAPGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAPTDAEA 137
           AP A    P   C L+C+       F+G++ A    +R    +R       L+ P   +A
Sbjct: 71  APGARELSPADGCVLVCAVCR---CFLGEQWAAFERARTPVDKRMY----WLKRPHQCDA 123

Query: 138 QA---LVGLGTPQTHQAHLPWPRAVGAAPGGLPVGGGGG-QVEALGRVLVEEQLVGARDD 193
            A     G G P+          A+G+A G      GGG ++        +  L    D 
Sbjct: 124 GAGGRRGGAGAPREWNVAY----ALGSATGDDDEDDGGGPRLRGAAEETRDSDLSELSDT 179

Query: 194 QTKHGQQAPLDRTVQQHAQGAHQVEDVAARVPR---APAAARPGRRAQRAGGGRAHRQAV 250
                   P       H  GA        R      AP  A PG+ A+ +  GRA  + +
Sbjct: 180 DPLSEPDPPARDAASPHQDGAPGPGPRGGRGQEWRPAPGPA-PGQGAEASAQGRAEEEGL 238

Query: 251 QRRVHLHAEARPG--SERAGCGRCRCPRGYWRDSWIPGSAETTAGAWVWGARVQWL--DP 306
             + H   E + G    R G GR   P    R S +    +   G  V  A    +   P
Sbjct: 239 PAKAHADGEPKAGVRRRRKGVGRHWVPEA--RASVLRSIQDPWQGPLVQEAPADGMKGPP 296

Query: 307 RGSRRPLLESR 317
            G     LESR
Sbjct: 297 SGRATKTLESR 307


>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
           sapiens]
          Length = 386

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 42/164 (25%), Positives = 56/164 (34%), Gaps = 27/164 (16%)

Query: 98  APGLVFVGQETAVKLSSRAWFHQRHVDAHAVLRAPTDAEAQALVGLGTPQTHQAHLP--W 155
           APG    G+    +LS+  W            RA      +   G+G  +  ++  P  W
Sbjct: 136 APGSGLRGRGQRGRLSAATW-------RRGPARAELAGSGRRWWGVGEAREGRSAPPRDW 188

Query: 156 PRAVGAAPGGLPVGGGGGQVEALGRVLVEEQLVGARDDQTKHGQ----------QAPLDR 205
           P  +G      P GG GG     G V        ARD     G+            P   
Sbjct: 189 PEPLGELRPSAPRGGKGGP--RAGVVAAS----WARDSGPGVGRPVPDLEVAVINGPQPL 242

Query: 206 TVQQHAQGAHQVE--DVAARVPRAPAAARPGRRAQRAGGGRAHR 247
            +  H Q  +  E  +  AR+P  PAA   G R    G GR  R
Sbjct: 243 AICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVR 286


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,105,301
Number of Sequences: 37866
Number of extensions: 776079
Number of successful extensions: 3618
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 3554
Number of HSP's gapped (non-prelim): 164
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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