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Search of human proteins with 239743790
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
(124 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 261 1e-70
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 252 5e-68
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 252 6e-68
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 221 1e-58
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 219 4e-58
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 209 6e-55
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 209 6e-55
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 209 6e-55
gi|239752497 PREDICTED: similar to family with sequence similari... 192 4e-50
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 190 3e-49
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 190 3e-49
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 190 3e-49
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 187 1e-48
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 187 1e-48
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 187 1e-48
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 187 1e-48
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 181 1e-46
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 178 8e-46
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 167 2e-42
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 51 3e-07
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 43 7e-05
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 41 2e-04
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 40 4e-04
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 39 0.001
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 39 0.001
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 36 0.007
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 34 0.025
gi|148746195 trichohyalin [Homo sapiens] 34 0.025
gi|125988409 RED protein [Homo sapiens] 33 0.056
gi|7657138 golgi integral membrane protein 4 [Homo sapiens] 33 0.073
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 261 bits (667), Expect = 1e-70
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
Query: 121 PGNP 124
PGNP
Sbjct: 121 PGNP 124
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 252 bits (644), Expect = 5e-68
Identities = 122/125 (97%), Positives = 122/125 (97%), Gaps = 1/125 (0%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTE-THTQRHTEEALKHT 119
HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTH THTQRHTEEALKHT
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHTTHTQRHTEEALKHT 120
Query: 120 PPGNP 124
PPGNP
Sbjct: 121 PPGNP 125
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 252 bits (643), Expect = 6e-68
Identities = 122/124 (98%), Positives = 122/124 (98%), Gaps = 2/124 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN HTHTETHTQRHTEEALKHTP
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN--HTHTETHTQRHTEEALKHTP 118
Query: 121 PGNP 124
PGNP
Sbjct: 119 PGNP 122
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 221 bits (562), Expect = 1e-58
Identities = 105/126 (83%), Positives = 112/126 (88%), Gaps = 2/126 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLR+RRISSRGPG KADP ++KRLT GLMTQ ETQKEA QRQAAMR+TALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGR--HTHTETHTQRHTEEALKH 118
TGH++PKTHTHTG+HTQTHRERERNTQRLRDRERRENGR HTHT THTQRHT EALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
Query: 119 TPPGNP 124
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 219 bits (558), Expect = 4e-58
Identities = 104/126 (82%), Positives = 112/126 (88%), Gaps = 2/126 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLR+RRISSRGPG KADP ++KRLT GLMTQ ETQKEA QRQAAMR+TALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHT--HTETHTQRHTEEALKH 118
TGH++PKTHTHTG+HTQTHRERERNTQRLRDRERRE GRHT HT+THTQRHT EALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQRHTAEALKH 120
Query: 119 TPPGNP 124
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 209 bits (531), Expect = 6e-55
Identities = 101/124 (81%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERRENGRHTHT+ T+ HT EALKHTP
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQ--TKGHTAEALKHTP 118
Query: 121 PGNP 124
PGNP
Sbjct: 119 PGNP 122
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 209 bits (531), Expect = 6e-55
Identities = 101/124 (81%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERRENGRHTHT+ T+ HT EALKHTP
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQ--TKGHTAEALKHTP 118
Query: 121 PGNP 124
PGNP
Sbjct: 119 PGNP 122
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 209 bits (531), Expect = 6e-55
Identities = 101/124 (81%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERRENGRHTHT+ T+ HT EALKHTP
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQ--TKGHTAEALKHTP 118
Query: 121 PGNP 124
PGNP
Sbjct: 119 PGNP 122
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 192 bits (489), Expect = 4e-50
Identities = 95/122 (77%), Positives = 103/122 (84%), Gaps = 4/122 (3%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLR++RISSRGPG H KAD ++KRLT GLMTQAE +KEA QRQAAMR+TALW
Sbjct: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGR----HTHTETHTQRHTEEAL 116
TGH+ PKTHTHTG+HTQTHRERERNTQRLRDRERRE R HTHTETHTQ HT EAL
Sbjct: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
Query: 117 KH 118
KH
Sbjct: 121 KH 122
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 190 bits (482), Expect = 3e-49
Identities = 94/126 (74%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRH--THTETHTQRHTEEALKH 118
TGH++PKTH HTG HTQT RERERNTQRLRDRERRENGRH T+T THTQ HT A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 119 TPPGNP 124
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 190 bits (482), Expect = 3e-49
Identities = 94/126 (74%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRH--THTETHTQRHTEEALKH 118
TGH++PKTH HTG HTQT RERERNTQRLRDRERRENGRH T+T THTQ HT A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 119 TPPGNP 124
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 190 bits (482), Expect = 3e-49
Identities = 94/126 (74%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRH--THTETHTQRHTEEALKH 118
TGH++PKTH HTG HTQT RERERNTQRLRDRERRENGRH T+T THTQ HT A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 119 TPPGNP 124
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 187 bits (476), Expect = 1e-48
Identities = 92/119 (77%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHT 119
TGH++PKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHT T T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHT-HTHKHT 118
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 187 bits (476), Expect = 1e-48
Identities = 92/119 (77%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHT 119
TGH++PKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHT T T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHT-HTHKHT 118
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 187 bits (476), Expect = 1e-48
Identities = 92/119 (77%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHT 119
TGH++PKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHT T T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHT-HTHKHT 118
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 187 bits (476), Expect = 1e-48
Identities = 92/119 (77%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHT 119
TGH++PKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHT T T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHT-HTHKHT 118
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 181 bits (460), Expect = 1e-46
Identities = 88/111 (79%), Positives = 97/111 (87%), Gaps = 2/111 (1%)
Query: 6 QLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
QLLRDRRISSRGPGLH KA+P+++K LTTGLMTQAE QK+A QRQAAMR+TALW TGH+
Sbjct: 5 QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEAL 116
+P+THTHTG HTQT RERERNTQRLRDRERRENGRHTHT TH RHT L
Sbjct: 65 RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTH--RHTHRVL 113
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 178 bits (452), Expect = 8e-46
Identities = 87/111 (78%), Positives = 96/111 (86%), Gaps = 2/111 (1%)
Query: 6 QLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
QLLRDRRISSRGPGLH KA+ +++K LTTGLMTQAE QK+A QRQAAMR+TALW TGH+
Sbjct: 5 QLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEAL 116
+P+THTHTG HTQT RERERNTQRLRDRERRENGRHTHT TH RHT L
Sbjct: 65 RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTH--RHTHRVL 113
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 167 bits (422), Expect = 2e-42
Identities = 87/140 (62%), Positives = 99/140 (70%), Gaps = 22/140 (15%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDR ISS GPGLH KA P++++RLTTG TQAETQKEA QRQA MR+ ALW
Sbjct: 1 MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGR----------------HTHT 104
TG ++P+T + QT RERERNTQR RD+ER+ENGR HTHT
Sbjct: 61 RTGRIRPET------YMQTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114
Query: 105 ETHTQRHTEEALKHTPPGNP 124
+THTQ H EALKHTPPGNP
Sbjct: 115 QTHTQDHRAEALKHTPPGNP 134
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 50.8 bits (120), Expect = 3e-07
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 18 PGLHRAKADPQQQ---KRLTTGLMTQAETQKEAQQRQA-AMRKTALWHTGHLQP-KTHTH 72
P L R P+ + KRL TG TQAET+ EA Q++ R A G P +THT
Sbjct: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQ 61
Query: 73 TGMHTQTHRERER-----NTQRLRDRERREN--------GRHTHTETHTQRHT 112
T + R +ER +R R+R +RE HTHT+TH HT
Sbjct: 62 TDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 42.7 bits (99), Expect = 7e-05
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPK 68
R R ++ H + ++++R T T+ E +++ + + RKT Q +
Sbjct: 193 RQREKENKTEDRHSERGRERERERETE---TETERKRQTDRERDRQRKTE--REREKQAE 247
Query: 69 THTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTE 113
+ T+ +ERER R RDR+RR+ R T+ QR TE
Sbjct: 248 RERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTE 292
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/91 (23%), Positives = 40/91 (43%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRER 83
K + ++++ + E +E ++ + R+T + + Q + RER
Sbjct: 316 KRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERER 375
Query: 84 ERNTQRLRDRERRENGRHTHTETHTQRHTEE 114
ER+ Q R+RE RE R + +R TE+
Sbjct: 376 ERDRQSAREREERERDRDRDRQKERERQTEK 406
Score = 37.7 bits (86), Expect = 0.002
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMR---KTALWHTGHLQPKTHTHTGMHTQTH 80
+ D ++Q++ + E +K Q+R+ R K H + T+T
Sbjct: 162 QTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETE 221
Query: 81 RERERNTQRLRDRER---RENGRHTHTETHTQRHTE 113
ER+R T R RDR+R RE + E ++R TE
Sbjct: 222 TERKRQTDRERDRQRKTEREREKQAERERASERETE 257
Score = 36.2 bits (82), Expect = 0.007
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Query: 14 SSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHT 73
S R GL +A D R + +++ Q + RK K H
Sbjct: 36 SPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHR 95
Query: 74 GMHTQTHRERERNTQRLRDRER-RENGRHTHTETHTQRHTE 113
+ERER T R RDR+R +E R E T+R E
Sbjct: 96 ERQRDREKERERQTDRERDRQREKERNRQKERERETEREGE 136
Score = 35.0 bits (79), Expect = 0.015
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQA--ETQKEAQQRQAAMRKTALWHTGHLQ 66
RDRR R + D ++Q+R T+ E Q+E ++ + RK +
Sbjct: 272 RDRRQKER-----ERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERE 326
Query: 67 PKTHTHTGMHTQTHRERERNTQRLRDRER-RENGRHTHTETHTQRHTE 113
+ T + RER+R Q DRER R+ GR + +R E
Sbjct: 327 RERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERE 374
Score = 34.7 bits (78), Expect = 0.019
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMR-----KTALWHTGHLQPKTHTHTGMHTQ 78
K + +++K+ ++ ET+++ ++ + R + K T +
Sbjct: 237 KTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRE 296
Query: 79 THRERERNTQRLRDRER---RENGRHTHTETHTQRHTE 113
T R+RER +R R+RER RE R E QR TE
Sbjct: 297 TERKRERQRERERERERNRKRERERERERERERQRETE 334
Score = 34.3 bits (77), Expect = 0.025
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 18/90 (20%)
Query: 42 ETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER------ 95
+ Q + Q+ + R + T + Q RERE+N Q R+RER
Sbjct: 140 DRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKEN 199
Query: 96 ------------RENGRHTHTETHTQRHTE 113
RE R T TET +R T+
Sbjct: 200 KTEDRHSERGRERERERETETETERKRQTD 229
Score = 30.0 bits (66), Expect = 0.47
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 26 DPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRER-- 83
D Q++K + ET++E ++ + R+T Q T R+R
Sbjct: 114 DRQREKERNRQKERERETEREGERGRD--RQTDGQRERERQRDAEKERERQTDRERQRQT 171
Query: 84 ERNTQRLRDR-----ERRENGRHTHTETHTQ-RHTE 113
ERN Q+ R+R ERRE R E T+ RH+E
Sbjct: 172 ERNRQKEREREKNRQERRERERQREKENKTEDRHSE 207
Score = 29.6 bits (65), Expect = 0.62
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 40 QAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER-REN 98
Q + +KE +++ R + Q + T + R+R+ + QR R+R+R E
Sbjct: 98 QRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEK 157
Query: 99 GRHTHTETHTQRHTE 113
R T+ QR TE
Sbjct: 158 ERERQTDRERQRQTE 172
Score = 28.5 bits (62), Expect = 1.4
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 10 DRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKT 69
DR+ R K D ++++ + +T +E +++ R + +
Sbjct: 76 DRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREG 135
Query: 70 HTHTGMHTQTHRERERNTQRLRDRERR-ENGRHTHTETHTQRHTE 113
T RERER ++RER+ + R TE + Q+ E
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKERE 180
Score = 27.7 bits (60), Expect = 2.4
Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 9 RDRRISSRGPGLHRAKADPQQQK---RLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
R+R + G +A+ + ++++ R + + E ++ +++ R+T G
Sbjct: 353 RERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQR 412
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRER-RENGRHTHTETHTQRHTEEALKHTPP 121
+ + ++ R RER +R + + R R+ R T + QR + PP
Sbjct: 413 ETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPP 469
Score = 26.9 bits (58), Expect = 4.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 81 RERERNTQRLRDRERRENGRHTHTETHTQRHTEEALK 117
RER R +R R RE+R+ R T + +R + K
Sbjct: 54 RERNRQKERERRREKRQTERETDRKRERRREKDRHRK 90
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 41.2 bits (95), Expect = 2e-04
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 9 RDRRISSRGPGLHRAK---ADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
RDR S+ H + D ++ + + +T +E ++++ R
Sbjct: 31 RDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETER 90
Query: 66 QPKTHTHTGMHTQTHRER----ERNTQRLRDRER---RENGRHTHTETHTQRHTE 113
+ T HT+T RER ER +R+RDRER +E GR T+ T R E
Sbjct: 91 ERDKERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERE 145
Score = 41.2 bits (95), Expect = 2e-04
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 28 QQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNT 87
++QK + T ET +E ++RQA + TG + H RERER
Sbjct: 125 EKQKEMGRERQTDRETDRE-RERQAERER----ETGRERKTEDRHR------ERERERKR 173
Query: 88 QRLRDRERRENGRHTHTETHTQRHTE 113
+R R RE +E RHT E QR T+
Sbjct: 174 ERERKRETKERERHTDMERERQRETD 199
Score = 35.0 bits (79), Expect = 0.015
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 70 HTHTGMHTQTH-RERERNTQRLRDRERRENGRHTHTETHTQRHTE 113
HTHT T RER R T R RDR + H+E QR E
Sbjct: 9 HTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRE 53
Score = 33.9 bits (76), Expect = 0.033
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRER 83
+ D ++QK+ + + ++E Q+ R+T T Q RER
Sbjct: 103 ETDRERQKQKEREMERVRDREREKQKEMGRERQT----------DRETDRERERQAERER 152
Query: 84 ERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHT 119
E +R + RE R E +R T+E +HT
Sbjct: 153 ETGRERKTEDRHRERERERKRERERKRETKERERHT 188
Score = 29.6 bits (65), Expect = 0.62
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 19/99 (19%)
Query: 34 TTGLMTQAETQKEAQQRQAAMR--------KTALWHTGHLQPKTHTHTGMHTQTHRERER 85
T G T ET+ +QR+ K + H + + + R+RER
Sbjct: 5 TEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDRER 64
Query: 86 NTQ------RLRDRER-----RENGRHTHTETHTQRHTE 113
Q R R+RER RE R E T RHTE
Sbjct: 65 EKQTDREGERQRERERDRDRQRETERERDKERETDRHTE 103
Score = 29.6 bits (65), Expect = 0.62
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 76 HTQTHRERERNTQRLRDRER 95
HT RER+R T R RDR+R
Sbjct: 187 HTDMERERQRETDRKRDRQR 206
Score = 28.9 bits (63), Expect = 1.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 94 ERRENGRHTHTETHTQRHTEEALKHT 119
E + GRHTHTET T E + T
Sbjct: 2 ESKTEGRHTHTETETMDRQRERRRET 27
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 40.4 bits (93), Expect = 4e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 69 THTHTGMHTQTHRERERNTQRLRDRER 95
THTHT HT+ RE ER T+R R+RER
Sbjct: 74 THTHTHTHTENERESERETERERERER 100
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 38.9 bits (89), Expect = 0.001
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 8 LRDRRISSRGP--GLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
+RDRR S+R R P +++R + T + ++ R RK G+L
Sbjct: 591 IRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDD-QRGNL 649
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEE 114
+H H G + R++ER+ +DR++++ R + ++ E
Sbjct: 650 SGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKRE 698
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 38.9 bits (89), Expect = 0.001
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 8 LRDRRISSRGP--GLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
+RDRR S+R R P +++R + T + ++ R RK G+L
Sbjct: 591 IRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDD-QRGNL 649
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEE 114
+H H G + R++ER+ +DR++++ R + ++ E
Sbjct: 650 SGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKRE 698
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 36.2 bits (82), Expect = 0.007
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 28 QQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNT 87
++++ G T+ E ++ ++ R+ H Q H T +ERER
Sbjct: 6 ERKRETDRGKETERERDRQRERENQTERENR-----HRQRDRHRERDRQTDREKERERQK 60
Query: 88 QRLRDRER-RENGRHTHTETHTQRHTE 113
+R R R+R RE R T + QR E
Sbjct: 61 ERDRQRQRERETERETERQRERQRQRE 87
Score = 35.0 bits (79), Expect = 0.015
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 13/118 (11%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAM------------RK 56
RDR+ + + D Q+Q+ T T+ + +++ Q+ + RK
Sbjct: 46 RDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERK 105
Query: 57 TALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER-RENGRHTHTETHTQRHTE 113
K T+ R+RER QR R+RER R+ R T+ QR E
Sbjct: 106 RETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAE 163
Score = 34.3 bits (77), Expect = 0.025
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEA----QQRQAAMRKTALWHTGH 64
R+R + HR + D +++ T + E QKE Q+ + R+T
Sbjct: 25 RERENQTERENRHRQR-DRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQ 83
Query: 65 LQPKTHTHTGMHTQTHRERERNTQRLRDRER-RENGRHTHTETHTQRHTE 113
Q + T R+RER + R+RER R+ GR +T +R E
Sbjct: 84 RQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRE 133
Score = 31.6 bits (70), Expect = 0.16
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 68 KTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEE 114
K T G T+ R+R+R + +RE R R H E Q E+
Sbjct: 8 KRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREK 54
Score = 26.6 bits (57), Expect = 5.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 10/46 (21%)
Query: 75 MHTQTHRERE----RNTQRLRDRER-REN-----GRHTHTETHTQR 110
M Q R+RE + T+R RDR+R REN RH + H +R
Sbjct: 1 MERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRER 46
Score = 26.2 bits (56), Expect = 6.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 68 KTHTHTGMHTQTHRERERNTQRLRDRER---RENGRHTHTETHTQRHTEEALK 117
+T + R+RER QR R+R+R RE R E + +E K
Sbjct: 125 QTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKK 177
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 34.3 bits (77), Expect = 0.025
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 40 QAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENG 99
Q E ++ Q+ R+ + +T T +ERER T R RDR+R+
Sbjct: 156 QTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRK--- 212
Query: 100 RHTHTETHTQRHTE 113
T+T QR T+
Sbjct: 213 ----TQTERQRETD 222
Score = 32.0 bits (71), Expect = 0.12
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 23 AKADPQQQKRLTTGLMTQAET---QKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQT 79
A D +Q++R T+ E +K ++R+ ++T Q + Q
Sbjct: 72 ADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQK 131
Query: 80 HRERERNTQRLRDRER---RENGRHTHTETHTQRHTE 113
RERER+ R R+R+R +E R T + QR TE
Sbjct: 132 GRERERDRGRERERDRDREKERERQTEKDRDGQRETE 168
Score = 31.2 bits (69), Expect = 0.21
Identities = 15/76 (19%), Positives = 33/76 (43%)
Query: 39 TQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN 98
T+ E +++ + + RKT + T + R+R+R +R R+R+R+E
Sbjct: 195 TEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEE 254
Query: 99 GRHTHTETHTQRHTEE 114
+ + + E+
Sbjct: 255 RKKERKKERKKERKEK 270
Score = 30.8 bits (68), Expect = 0.28
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 40 QAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER-REN 98
+ ET++E + + ++ Q T T R+R+R TQ R RE RE
Sbjct: 166 ETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREG 225
Query: 99 GRHTHTETHTQR 110
R T QR
Sbjct: 226 ERETDRRRERQR 237
Score = 29.3 bits (64), Expect = 0.81
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 42 ETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRE-RRENGR 100
E +++ + + R+T G + +T + +ERE R R R+ +E R
Sbjct: 142 ERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERER 201
Query: 101 HTHTETHTQRHTE 113
T E QR T+
Sbjct: 202 QTDRERDRQRKTQ 214
Score = 27.3 bits (59), Expect = 3.1
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPK 68
R+R+ G + + ++ + + E ++ Q+ R+ Q K
Sbjct: 153 RERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRK 212
Query: 69 THTHTGMHTQTHRERERNTQRLRDRER-----RENGRHTHTETHTQRHTE 113
T T T ERE + +R R R+R R+ R E +R E
Sbjct: 213 TQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKE 262
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 34.3 bits (77), Expect = 0.025
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 6 QLLRDRRISSRGPGLHRAKA-DPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGH 64
QL R++ R L R + +QQ R L + + ++E Q R+ +
Sbjct: 363 QLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRRE 422
Query: 65 LQPKTHTHTGMHTQTHRERERNTQRL-RDRERRENG--RHTHTETHTQRHTEEALK 117
Q + H Q H E+ER QRL R++E R + R TE H Q ++ LK
Sbjct: 423 QQLRREQEEERHEQKH-EQERREQRLKREQEERRDWLKREEETERHEQERRKQQLK 477
Score = 32.0 bits (71), Expect = 0.12
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 22 RAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHR 81
+ + + QQQ+R + Q E +KE ++R+ +RK LQ + Q R
Sbjct: 221 KGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRK----EEEKLQEE-------EPQRQR 269
Query: 82 ERERNTQRLRDRERRENGRHTHTETHTQR 110
E + ++LR ER+E R E Q+
Sbjct: 270 ELQEEEEQLRKLERQELRRERQEEEQQQQ 298
Score = 31.2 bits (69), Expect = 0.21
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 8/112 (7%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPK 68
RDR++ PG R + +Q++ L G Q+E Q+ +QR R LW +
Sbjct: 125 RDRQLEEE-PGQRRRQKRQEQERELAEG-EEQSEKQERLEQRDRQRRDEELWRQRQEWQE 182
Query: 69 THTHTGMHTQTHRERERNT------QRLRDRERRENGRHTHTETHTQRHTEE 114
Q + T ++LR RE E R E QR +
Sbjct: 183 REERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQ 234
Score = 30.4 bits (67), Expect = 0.36
Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 10 DRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKT 69
+ ++ P R + ++Q R + E Q+E QQ+Q R+ L + +
Sbjct: 257 EEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERRE 316
Query: 70 HTHTGMHTQTHRER--ERNTQRLRDRERRENGRHTHTETHTQRHTEE 114
Q RE+ ER Q+LR + + E +R ++
Sbjct: 317 QQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQ 363
>gi|125988409 RED protein [Homo sapiens]
Length = 557
Score = 33.1 bits (74), Expect = 0.056
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 69 THTHTGMHTQTHRERERNTQRLRDRER-RENGRHTHTETHTQRHTEEALK 117
T T + +RERER+ +R RDR+R RE R E R EE K
Sbjct: 330 TKTPRDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKK 379
Score = 28.9 bits (63), Expect = 1.1
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 81 RERERNTQRLRDRER-RENGRHTHTETHTQRHTEEALKHT 119
RER+R R RDRER RE R E +R EE +H+
Sbjct: 344 RERDRERDRDRDRERERERDRERERERDRERE-EEKKRHS 382
>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
Length = 696
Score = 32.7 bits (73), Expect = 0.073
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 11/103 (10%)
Query: 24 KADPQQQKRLTT------GLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHT 77
K DP +Q+ +T G T E K ++ Q R +W P T ++
Sbjct: 249 KPDPAEQQNVTQVAHSPQGYNTARE--KPTREVQEVSRNNDVWQNHEAVPGRAEDTKLYA 306
Query: 78 QTHRERERNTQR---LRDRERRENGRHTHTETHTQRHTEEALK 117
TH+E E ++ ERRE H E H + EE ++
Sbjct: 307 PTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEME 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.125 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,447,042
Number of Sequences: 37866
Number of extensions: 211093
Number of successful extensions: 2547
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 1447
Number of HSP's gapped (non-prelim): 660
length of query: 124
length of database: 18,247,518
effective HSP length: 89
effective length of query: 35
effective length of database: 14,877,444
effective search space: 520710540
effective search space used: 520710540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.