Search of human proteins with 239743656

Search of human proteins with 239743656

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239743656 PREDICTED: hypothetical protein XP_002342923 [Homo
sapiens]
         (184 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754969 PREDICTED: hypothetical protein [Homo sapiens]           397   e-111
gi|239749517 PREDICTED: hypothetical protein [Homo sapiens]           397   e-111
gi|239743656 PREDICTED: hypothetical protein XP_002342923 [Homo ...   397   e-111
gi|121583542 mitogen-activated protein kinase kinase kinase 15 [...    44   8e-05
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]                     42   2e-04
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]                     42   2e-04
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi...    40   9e-04
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]      40   0.001
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]      40   0.001
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ...    40   0.001
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]                     40   0.001
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap...    39   0.002
gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...    38   0.004
gi|46488935 interferon alpha/beta receptor 2 isoform b precursor...    37   0.010
gi|19923129 interferon alpha/beta receptor 2 isoform b precursor...    37   0.010
gi|24308547 hypothetical protein LOC196500 [Homo sapiens]              37   0.013
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       36   0.021
gi|151301154 mucin 6, gastric [Homo sapiens]                           35   0.036
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]         35   0.048
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       35   0.048
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       35   0.048
gi|194306647 protein phosphatase 1, regulatory subunit 14D isofo...    34   0.062
gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer...    34   0.081
gi|45387951 transmembrane protein 108 [Homo sapiens]                   33   0.11 
gi|210147493 transmembrane protein 108 [Homo sapiens]                  33   0.11 
gi|57863314 vacuolar protein sorting 37C [Homo sapiens]                33   0.11 
gi|149588643 zinc finger protein 283 [Homo sapiens]                    33   0.11 
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]                     33   0.14 
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]                     33   0.14 
gi|50428940 mediator complex subunit 25 [Homo sapiens]                 33   0.14 

>gi|239754969 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 184

 Score =  397 bits (1021), Expect = e-111
 Identities = 184/184 (100%), Positives = 184/184 (100%)

Query: 1   MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60
           MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH
Sbjct: 1   MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60

Query: 61  PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120
           PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC
Sbjct: 61  PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120

Query: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180
           GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW
Sbjct: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180

Query: 181 SAVA 184
           SAVA
Sbjct: 181 SAVA 184


>gi|239749517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 184

 Score =  397 bits (1021), Expect = e-111
 Identities = 184/184 (100%), Positives = 184/184 (100%)

Query: 1   MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60
           MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH
Sbjct: 1   MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60

Query: 61  PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120
           PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC
Sbjct: 61  PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120

Query: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180
           GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW
Sbjct: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180

Query: 181 SAVA 184
           SAVA
Sbjct: 181 SAVA 184


>gi|239743656 PREDICTED: hypothetical protein XP_002342923 [Homo
           sapiens]
          Length = 184

 Score =  397 bits (1021), Expect = e-111
 Identities = 184/184 (100%), Positives = 184/184 (100%)

Query: 1   MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60
           MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH
Sbjct: 1   MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60

Query: 61  PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120
           PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC
Sbjct: 61  PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHC 120

Query: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180
           GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW
Sbjct: 121 GPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPPRFKRFSCLSLPSSWDYRVSLCCPGW 180

Query: 181 SAVA 184
           SAVA
Sbjct: 181 SAVA 184


>gi|121583542 mitogen-activated protein kinase kinase kinase 15
           [Homo sapiens]
          Length = 788

 Score = 43.9 bits (102), Expect = 8e-05
 Identities = 20/28 (71%), Positives = 21/28 (75%), Gaps = 4/28 (14%)

Query: 154 PPRFKRFSCLSLPSSWDYRVS----LCC 177
           PPRFKRFSCLSL SSWDY +S     CC
Sbjct: 40  PPRFKRFSCLSLQSSWDYSLSKFDERCC 67


>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 17/18 (94%), Positives = 17/18 (94%)

Query: 154 PPRFKRFSCLSLPSSWDY 171
           PP FKRFSCLSLPSSWDY
Sbjct: 323 PPGFKRFSCLSLPSSWDY 340


>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 17/18 (94%), Positives = 17/18 (94%)

Query: 154 PPRFKRFSCLSLPSSWDY 171
           PP FKRFSCLSLPSSWDY
Sbjct: 323 PPGFKRFSCLSLPSSWDY 340


>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
           sapiens]
          Length = 440

 Score = 40.4 bits (93), Expect = 9e-04
 Identities = 16/19 (84%), Positives = 17/19 (89%)

Query: 154 PPRFKRFSCLSLPSSWDYR 172
           PP FK+FSCL LPSSWDYR
Sbjct: 378 PPGFKQFSCLILPSSWDYR 396


>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
          Length = 825

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 15/20 (75%), Positives = 19/20 (95%)

Query: 156 RFKRFSCLSLPSSWDYRVSL 175
           RF++FSCLSLPS+WDYRV +
Sbjct: 800 RFQQFSCLSLPSTWDYRVKI 819


>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
          Length = 819

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 15/20 (75%), Positives = 19/20 (95%)

Query: 156 RFKRFSCLSLPSSWDYRVSL 175
           RF++FSCLSLPS+WDYRV +
Sbjct: 794 RFQQFSCLSLPSTWDYRVKI 813


>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
           sapiens]
          Length = 402

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 16/18 (88%), Positives = 16/18 (88%)

Query: 154 PPRFKRFSCLSLPSSWDY 171
           PP FKRFSCLSLPSSW Y
Sbjct: 323 PPGFKRFSCLSLPSSWGY 340


>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 16/18 (88%), Positives = 16/18 (88%)

Query: 154 PPRFKRFSCLSLPSSWDY 171
           PP FKRFSCLSLPSSW Y
Sbjct: 323 PPGFKRFSCLSLPSSWGY 340


>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
          Length = 1079

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 17/25 (68%), Positives = 19/25 (76%)

Query: 154  PPRFKRFSCLSLPSSWDYRVSLCCP 178
            PP FKRFS LSLP+SW+YR    CP
Sbjct: 1010 PPGFKRFSHLSLPNSWNYRHLPSCP 1034


>gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA
           synthase isoform 3 [Homo sapiens]
          Length = 500

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 15/19 (78%), Positives = 16/19 (84%)

Query: 154 PPRFKRFSCLSLPSSWDYR 172
           PP F  F+CLSLPSSWDYR
Sbjct: 13  PPGFTPFACLSLPSSWDYR 31


>gi|46488935 interferon alpha/beta receptor 2 isoform b precursor
           [Homo sapiens]
          Length = 331

 Score = 37.0 bits (84), Expect = 0.010
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 155 PRFKRFSCLSLPSSWDYRVSLCCP 178
           P  K+ SCLS PSSWDY+ +  CP
Sbjct: 306 PELKQSSCLSFPSSWDYKRASLCP 329


>gi|19923129 interferon alpha/beta receptor 2 isoform b precursor
           [Homo sapiens]
          Length = 331

 Score = 37.0 bits (84), Expect = 0.010
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 155 PRFKRFSCLSLPSSWDYRVSLCCP 178
           P  K+ SCLS PSSWDY+ +  CP
Sbjct: 306 PELKQSSCLSFPSSWDYKRASLCP 329


>gi|24308547 hypothetical protein LOC196500 [Homo sapiens]
          Length = 282

 Score = 36.6 bits (83), Expect = 0.013
 Identities = 42/142 (29%), Positives = 50/142 (35%), Gaps = 31/142 (21%)

Query: 15  PQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRH------TPHPDMQTRAP 68
           P LLLP P      S  P TPPAP     A G     P +PRH       P P    R P
Sbjct: 19  PLLLLPLPPPAQGSSSSPRTPPAPARPPCARGG----PSAPRHVCVWERAPPPSRSPRVP 74

Query: 69  WHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHCGPVVQQE- 127
                ++      G   P           AT  G  EG    ++   W +  GP V +E 
Sbjct: 75  -----RSRRQVLPGTAPP-----------ATPSGFEEGPP--SSQYPWAIVWGPTVSRED 116

Query: 128 --ADNFCRPGDVSPAPDAPPGL 147
               N   PG +     AP GL
Sbjct: 117 GGDPNSANPGFLDYGFAAPHGL 138


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 35.8 bits (81), Expect = 0.021
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 12/70 (17%)

Query: 1    MPQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLL---------FLGATGSSWNT 51
            +P  P +P Q  +PPQ +LP    +P+L  QP  PP P L          L    +   T
Sbjct: 962  LPPQPVLPPQPTRPPQPVLP---PQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAAT 1018

Query: 52   PGSPRHTPHP 61
            PGS     HP
Sbjct: 1019 PGSQILLGHP 1028



 Score = 35.0 bits (79), Expect = 0.036
 Identities = 44/156 (28%), Positives = 58/156 (37%), Gaps = 21/156 (13%)

Query: 1   MPQGPAIPA-QGQKPPQLLLPFP-----GSRPLLSLQPSTPPAPLLFLGATGSSWNTPGS 54
           MP GP  PA  GQ+PP L  P P       +P++ LQP  P  P     A     +  G+
Sbjct: 717 MPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPA-----SQVGA 771

Query: 55  PRHTPHPDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALA 114
           P     P    +AP    AQ           PP         +A ++G+     A   L 
Sbjct: 772 PAQL-KPLQMPQAPLQPLAQV------PPQMPPIPVVPPITPLAGIDGL---PPALPDLP 821

Query: 115 TWVVHCGPVVQQEADNFCRPGDVSPAPDAPPGLTLR 150
           T  V   P  Q  +     P   +P P A P L L+
Sbjct: 822 TATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQ 857



 Score = 34.3 bits (77), Expect = 0.062
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 2   PQGPAIPAQGQKPPQLLLPFPGS---RPLLSLQPSTPPAPLL 40
           P  PA+P Q   PPQ +LP   +   +P+L  QP+ PP P+L
Sbjct: 939 PPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVL 980



 Score = 34.3 bits (77), Expect = 0.062
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 1   MPQGPAIPAQGQKPPQLLLPFPGSR---PLLSLQPSTPPAPLL 40
           +P  P +P Q   PPQ +LP   +R   P+L  QP  PP P+L
Sbjct: 950 LPPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVL 992



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 6/131 (4%)

Query: 35  PPAPLLFLGATGSSWNTPGSPR-HTPHPDMQTRAPWHGAAQAHLSSAE----GDGRPPFK 89
           PP PL       +    PG P    P  D     P    +   L+S      G G   + 
Sbjct: 567 PPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLPPTLPTSATSLASDSTFDSGQGSTVYS 626

Query: 90  QQLSHLEVATVEGIVEGGDAFA-ALATWVVHCGPVVQQEADNFCRPGDVSPAPDAPPGLT 148
              S  +   +  + +   + A  + +  V  GPV+ Q   +       + AP  P G  
Sbjct: 627 DSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSV 686

Query: 149 LRPTCPPRFKR 159
             P CPP  ++
Sbjct: 687 PAPACPPSLQQ 697



 Score = 27.7 bits (60), Expect = 5.8
 Identities = 48/161 (29%), Positives = 58/161 (36%), Gaps = 31/161 (19%)

Query: 5   PAIPAQGQKP----PQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPH 60
           P  P Q   P    P L  P P + P L LQ    P P             PG+P   P 
Sbjct: 827 PVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHP-------------PGAPLAMPC 873

Query: 61  PDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQLS-HLEVATVEGIVEGGDAFAALATWVVH 119
             +   AP   A    L+ A     PP    LS H  VA + G      AF  +A   V 
Sbjct: 874 RTIVPNAP---ATIPLLAVA-----PPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDVP 925

Query: 120 CGP--VVQQEADNFCRPGDVSPAPDAPPGLTL--RPTCPPR 156
             P   VQ       +P  + P P  PP   L  +PT PP+
Sbjct: 926 PSPHHTVQNMRATPPQPA-LPPQPTLPPQPVLPPQPTLPPQ 965


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 35.0 bits (79), Expect = 0.036
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 9/58 (15%)

Query: 2    PQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTP 59
            P  P +P  G +P Q+  P  G+   + L  ST P+P        SS +TP SP  TP
Sbjct: 1205 PTTPQLPTTGSRPTQVW-PMTGTSTTIGLLSSTGPSP--------SSNHTPASPTQTP 1253


>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
          Length = 931

 Score = 34.7 bits (78), Expect = 0.048
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 2   PQGPAIPAQGQKPPQLLLPFPGSRPLLSLQPSTPPAPLLFLGATGSSWNTPGSPRHTPHP 61
           PQGP++  +G  PP L+    G+  +L++      +P L  G+     + PGSP   P  
Sbjct: 644 PQGPSL-IKGVAPPTLITDSTGTHLVLTVTNKNADSPGLSSGSPQQPSSQPGSPAPAPSA 702

Query: 62  DMQTRAP 68
            M    P
Sbjct: 703 QMDLEHP 709


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 34.7 bits (78), Expect = 0.048
 Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 2   PQGPAIPAQGQKPPQLLLPFPGSRPLLS---LQPSTPPAPLLFLGATGSSWNTP-----G 53
           P GP  PAQ + PPQ   P PG  P      LQ   PP     L   G    +P      
Sbjct: 452 PAGP--PAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLP 509

Query: 54  SPRHTP-HPDMQTRAPWHGAAQAHLSSAEGDGRPP 87
           SP   P  P  Q   P  G  +     A G G PP
Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 34.7 bits (78), Expect = 0.048
 Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 2   PQGPAIPAQGQKPPQLLLPFPGSRPLLS---LQPSTPPAPLLFLGATGSSWNTP-----G 53
           P GP  PAQ + PPQ   P PG  P      LQ   PP     L   G    +P      
Sbjct: 452 PAGP--PAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLP 509

Query: 54  SPRHTP-HPDMQTRAPWHGAAQAHLSSAEGDGRPP 87
           SP   P  P  Q   P  G  +     A G G PP
Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544


>gi|194306647 protein phosphatase 1, regulatory subunit 14D isoform
           2 [Homo sapiens]
          Length = 200

 Score = 34.3 bits (77), Expect = 0.062
 Identities = 14/20 (70%), Positives = 15/20 (75%)

Query: 154 PPRFKRFSCLSLPSSWDYRV 173
           PP F RFSCLS  SSWDY +
Sbjct: 106 PPGFNRFSCLSSWSSWDYGI 125


>gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase
           2 [Homo sapiens]
          Length = 530

 Score = 33.9 bits (76), Expect = 0.081
 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 10/68 (14%)

Query: 30  LQPSTPPAPL-LFLGATGSSWNTPGSPRHTP---HPDMQTRAPWH------GAAQAHLSS 79
           LQ   P  PL    GA G SW  PG P   P   H  +  R P+       GAA A  + 
Sbjct: 83  LQQCNPDGPLGAAAGAAGGSWGRPGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAG 142

Query: 80  AEGDGRPP 87
             G   PP
Sbjct: 143 MAGVAAPP 150


>gi|45387951 transmembrane protein 108 [Homo sapiens]
          Length = 575

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 25/144 (17%)

Query: 22  PGSRPLLSLQPS-TPPAPLLFLGATGSSWNTPGSPRHTPHPDMQTRAPWHGAAQAHLSSA 80
           P  R  L + PS TPP  ++   A  SS         TP+PD     P   AA     + 
Sbjct: 32  PSPRESLQVLPSGTPPGTMVT--APHSSTRHTSVVMLTPNPD---GPPSQAAAPMATPTP 86

Query: 81  EGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHCGPVVQQEADNFCRP-----G 135
             +G PP     +H  ++T+   V    + ++L+T     GP     A    +P     G
Sbjct: 87  RAEGHPP-----THT-ISTIAATVTAPHSESSLST-----GPAPAAMATTSSKPEGRPRG 135

Query: 136 DVSPAP--DAPPGLTLRP-TCPPR 156
             +P      PPG T RP T PPR
Sbjct: 136 QAAPTILLTKPPGATSRPTTAPPR 159


>gi|210147493 transmembrane protein 108 [Homo sapiens]
          Length = 575

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 25/144 (17%)

Query: 22  PGSRPLLSLQPS-TPPAPLLFLGATGSSWNTPGSPRHTPHPDMQTRAPWHGAAQAHLSSA 80
           P  R  L + PS TPP  ++   A  SS         TP+PD     P   AA     + 
Sbjct: 32  PSPRESLQVLPSGTPPGTMVT--APHSSTRHTSVVMLTPNPD---GPPSQAAAPMATPTP 86

Query: 81  EGDGRPPFKQQLSHLEVATVEGIVEGGDAFAALATWVVHCGPVVQQEADNFCRP-----G 135
             +G PP     +H  ++T+   V    + ++L+T     GP     A    +P     G
Sbjct: 87  RAEGHPP-----THT-ISTIAATVTAPHSESSLST-----GPAPAAMATTSSKPEGRPRG 135

Query: 136 DVSPAP--DAPPGLTLRP-TCPPR 156
             +P      PPG T RP T PPR
Sbjct: 136 QAAPTILLTKPPGATSRPTTAPPR 159


>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
          Length = 355

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 5/42 (11%)

Query: 2   PQGPAIPAQGQKPPQLLLP----FPGS-RPLLSLQPSTPPAP 38
           PQ    PA G KPP  + P    FPG  +P + LQP  PP P
Sbjct: 297 PQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGP 338


>gi|149588643 zinc finger protein 283 [Homo sapiens]
          Length = 679

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 14/18 (77%), Positives = 14/18 (77%)

Query: 154 PPRFKRFSCLSLPSSWDY 171
           PP F  FSCLSL SSWDY
Sbjct: 23  PPGFTLFSCLSLLSSWDY 40


>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
          Length = 1096

 Score = 33.1 bits (74), Expect = 0.14
 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 9/51 (17%)

Query: 2   PQGPAIPAQGQKPPQLLLPFPGSRPL---------LSLQPSTPPAPLLFLG 43
           P  P +P  G  PP    P PG  PL         +   P  PP PLLF G
Sbjct: 552 PAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGG 602


>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
          Length = 1101

 Score = 33.1 bits (74), Expect = 0.14
 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 9/51 (17%)

Query: 2   PQGPAIPAQGQKPPQLLLPFPGSRPL---------LSLQPSTPPAPLLFLG 43
           P  P +P  G  PP    P PG  PL         +   P  PP PLLF G
Sbjct: 552 PAAPPLPGVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLLFGG 602


>gi|50428940 mediator complex subunit 25 [Homo sapiens]
          Length = 747

 Score = 33.1 bits (74), Expect = 0.14
 Identities = 45/162 (27%), Positives = 58/162 (35%), Gaps = 25/162 (15%)

Query: 12  QKPPQLLLPFPGSRPLLSLQPSTPPAPL------------LFLGATGSSWNTPGSPRHTP 59
           +K P L L F  + P   L+P  PP  +            L L   G S   PG  +   
Sbjct: 186 RKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGS--APGPLQSKQ 243

Query: 60  HPDMQTRAPWHGAAQAHLSSAEGDGRPPFKQQ------LSHLEVATVEGIVEGGDAFAAL 113
              +   AP    + A LS+A     PP   Q      LS  +VA    +    +  A L
Sbjct: 244 PVPLPPAAP----SGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGL 299

Query: 114 ATWVVHCGPVVQQEADNFCRPGDVSPAPDAPPGLTLRPTCPP 155
                   P+ QQ A     P   +PAP  PPG    P  PP
Sbjct: 300 GPRFSPITPL-QQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP 340



 Score = 31.2 bits (69), Expect = 0.53
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 2   PQGPAIPAQGQKPPQLLL--PFPGSRPLLSLQPSTPPAPLLFLGATGSSWN---TPGSPR 56
           PQGP   A G  PP  +L    PG+ P L      PP P   +    +S +    PG+P 
Sbjct: 618 PQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPA 677

Query: 57  HTPHPDMQTRAPWHGAAQAHLSSAE 81
             P P      P  G    H   A+
Sbjct: 678 LLPPPHQGLGQPQLGPPLLHPPPAQ 702


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,992,093
Number of Sequences: 37866
Number of extensions: 672627
Number of successful extensions: 3601
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 3267
Number of HSP's gapped (non-prelim): 525
length of query: 184
length of database: 18,247,518
effective HSP length: 96
effective length of query: 88
effective length of database: 14,612,382
effective search space: 1285889616
effective search space used: 1285889616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.