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Search of human proteins with 239742312
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742312 PREDICTED: hypothetical protein XP_002342488 [Homo
sapiens]
(246 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo ... 512 e-145
gi|239742312 PREDICTED: hypothetical protein XP_002342488 [Homo ... 512 e-145
gi|239753821 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 3e-04
gi|19924103 synapsin II isoform IIa [Homo sapiens] 42 5e-04
gi|156416026 zinc finger protein 219 [Homo sapiens] 42 6e-04
gi|156415998 zinc finger protein 219 [Homo sapiens] 42 6e-04
gi|156415996 zinc finger protein 219 [Homo sapiens] 42 6e-04
gi|157168329 formin 1 [Homo sapiens] 41 8e-04
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 41 0.001
gi|58331144 proline rich region 18 [Homo sapiens] 41 0.001
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|145309324 FH2 domain containing 1 [Homo sapiens] 40 0.002
gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo sa... 39 0.003
gi|16933557 dachsous 1 precursor [Homo sapiens] 39 0.003
gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo ... 39 0.004
gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo ... 39 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 39 0.004
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ... 39 0.005
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 38 0.007
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 38 0.007
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 38 0.007
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 38 0.007
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 38 0.007
gi|38787970 tensin like C1 domain containing phosphatase isoform... 38 0.007
gi|38787957 tensin like C1 domain containing phosphatase isoform... 38 0.007
gi|38787941 tensin like C1 domain containing phosphatase isoform... 38 0.007
gi|157785645 SPEG complex locus [Homo sapiens] 38 0.007
>gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo
sapiens]
Length = 246
Score = 512 bits (1318), Expect = e-145
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MHVLNGFTSSPSSAAWIDSDMCPQAIYVVSPSPMESPHHSKPEVRAHPGRLWKATVRQTV 60
MHVLNGFTSSPSSAAWIDSDMCPQAIYVVSPSPMESPHHSKPEVRAHPGRLWKATVRQTV
Sbjct: 1 MHVLNGFTSSPSSAAWIDSDMCPQAIYVVSPSPMESPHHSKPEVRAHPGRLWKATVRQTV 60
Query: 61 TCSSGAEVGSSQGTPSTYGSTAMAAAPGGMPLFFPARLWQSWLTNPLCTVLSTEEHSILA 120
TCSSGAEVGSSQGTPSTYGSTAMAAAPGGMPLFFPARLWQSWLTNPLCTVLSTEEHSILA
Sbjct: 61 TCSSGAEVGSSQGTPSTYGSTAMAAAPGGMPLFFPARLWQSWLTNPLCTVLSTEEHSILA 120
Query: 121 IIVIHDSQQVTGNSFSSDSNKELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENP 180
IIVIHDSQQVTGNSFSSDSNKELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENP
Sbjct: 121 IIVIHDSQQVTGNSFSSDSNKELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENP 180
Query: 181 ERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRS 240
ERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRS
Sbjct: 181 ERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRS 240
Query: 241 APAAAA 246
APAAAA
Sbjct: 241 APAAAA 246
>gi|239742312 PREDICTED: hypothetical protein XP_002342488 [Homo
sapiens]
Length = 246
Score = 512 bits (1318), Expect = e-145
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MHVLNGFTSSPSSAAWIDSDMCPQAIYVVSPSPMESPHHSKPEVRAHPGRLWKATVRQTV 60
MHVLNGFTSSPSSAAWIDSDMCPQAIYVVSPSPMESPHHSKPEVRAHPGRLWKATVRQTV
Sbjct: 1 MHVLNGFTSSPSSAAWIDSDMCPQAIYVVSPSPMESPHHSKPEVRAHPGRLWKATVRQTV 60
Query: 61 TCSSGAEVGSSQGTPSTYGSTAMAAAPGGMPLFFPARLWQSWLTNPLCTVLSTEEHSILA 120
TCSSGAEVGSSQGTPSTYGSTAMAAAPGGMPLFFPARLWQSWLTNPLCTVLSTEEHSILA
Sbjct: 61 TCSSGAEVGSSQGTPSTYGSTAMAAAPGGMPLFFPARLWQSWLTNPLCTVLSTEEHSILA 120
Query: 121 IIVIHDSQQVTGNSFSSDSNKELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENP 180
IIVIHDSQQVTGNSFSSDSNKELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENP
Sbjct: 121 IIVIHDSQQVTGNSFSSDSNKELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENP 180
Query: 181 ERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRS 240
ERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRS
Sbjct: 181 ERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRS 240
Query: 241 APAAAA 246
APAAAA
Sbjct: 241 APAAAA 246
>gi|239753821 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 45.4 bits (106), Expect = 4e-05
Identities = 37/92 (40%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 158 QELSNLSTLPSCGPEKPARIENPERPCRR-TPAPGAPRLQPPPPPSCSCQPGSRSSECLE 216
Q ++ L +C +P P RR +PA A + P +R +
Sbjct: 110 QHITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLP---------ARLPQLRM 160
Query: 217 PERRAP-PRPAN-PAKRERAAAAPRSAPAAAA 246
P RAP P PA P KRERAAAAPRSAPAAAA
Sbjct: 161 PRARAPRPAPAGQPPKRERAAAAPRSAPAAAA 192
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.7 bits (99), Expect = 3e-04
Identities = 30/84 (35%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 163 LSTLPSCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAP 222
+ T P G P P P PAP AP PPPPP P AP
Sbjct: 238 IQTPPFVGAAAPPAPAAPSPPA--APAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP 295
Query: 223 --PRPANPAKRERAAAAPRSAPAA 244
P PA A AAP APAA
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPAPAA 319
Score = 39.3 bits (90), Expect = 0.003
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 170 GPEKPARIENPERPCRRT-PAPGAPRLQPPPPPSC-SCQPGSRSSECLEPERRAPPRPAN 227
GP++P +P RP PAP A +L+PPP S SC P ++ AP PA
Sbjct: 101 GPQRPGP-PSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK 159
Query: 228 PAKRERAAAAPRSAP 242
PA AA A R+ P
Sbjct: 160 PA--GPAALAARAGP 172
Score = 37.0 bits (84), Expect = 0.016
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 188 PAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPP---RPANPAKRERAAAAPRSAPAA 244
PA GAP P PPP+ +PG P+R PP RP PA AA R P
Sbjct: 78 PAEGAPGAAPEPPPAGRARPGGGG-----PQRPGPPSPRRPLVPAGPAPPAAKLRPPPEG 132
Query: 245 AA 246
+A
Sbjct: 133 SA 134
Score = 28.9 bits (63), Expect = 4.3
Identities = 21/81 (25%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Query: 165 TLPSCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPR 224
+L + GP + P P P PP P+ P + + P PP
Sbjct: 216 SLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAA--PAAAPPPP 273
Query: 225 PANPAKRERAAAAPRSAPAAA 245
P PA R P P AA
Sbjct: 274 PPAPATLARPPGHPAGPPTAA 294
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 42.0 bits (97), Expect = 5e-04
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 163 LSTLPSCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQP-GSRSSECLEPERRA 221
LS P+ P++P + P+ + P Q PPP QP G + + P RR
Sbjct: 418 LSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGGPGQPQGMQPPGKVLPPRRL 477
Query: 222 PPRPANPAKRERAAAAPRSAP 242
PP P+ P ++++ SAP
Sbjct: 478 PPGPSLPPSSSSSSSSSSSAP 498
Score = 30.4 bits (67), Expect = 1.5
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Query: 188 PAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRSAP 242
P P P PPP P + + + PERR PP +A AP+ AP
Sbjct: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPP---------ASAPAPQPAP 74
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 41.6 bits (96), Expect = 6e-04
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 180 PERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPR 239
PERP T A P+ QP PPP QP RS EPE P P A A AAP
Sbjct: 215 PERPLAATSAAPPPQPQPQPPP----QPEPRSVPQPEPE----PEPEREATPTPAPAAPE 266
Query: 240 SAPA 243
PA
Sbjct: 267 EPPA 270
Score = 33.9 bits (76), Expect = 0.13
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 173 KPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQ 206
+P PER TPAP AP +PP PP CQ
Sbjct: 245 QPEPEPEPEREATPTPAPAAPE-EPPAPPEFRCQ 277
Score = 28.1 bits (61), Expect = 7.3
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 177 IENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEP----ERRAPPRP----ANP 228
++ R R PG P +PPPP P S + +P E + PRP A P
Sbjct: 545 LQRHHREQRSGAGPGPPP-EPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSGAGP 603
Query: 229 AKRERAAAAPRS 240
R + A+ R+
Sbjct: 604 GSRRKPASPGRT 615
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 41.6 bits (96), Expect = 6e-04
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 180 PERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPR 239
PERP T A P+ QP PPP QP RS EPE P P A A AAP
Sbjct: 215 PERPLAATSAAPPPQPQPQPPP----QPEPRSVPQPEPE----PEPEREATPTPAPAAPE 266
Query: 240 SAPA 243
PA
Sbjct: 267 EPPA 270
Score = 33.9 bits (76), Expect = 0.13
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 173 KPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQ 206
+P PER TPAP AP +PP PP CQ
Sbjct: 245 QPEPEPEPEREATPTPAPAAPE-EPPAPPEFRCQ 277
Score = 28.1 bits (61), Expect = 7.3
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 177 IENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEP----ERRAPPRP----ANP 228
++ R R PG P +PPPP P S + +P E + PRP A P
Sbjct: 545 LQRHHREQRSGAGPGPPP-EPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSGAGP 603
Query: 229 AKRERAAAAPRS 240
R + A+ R+
Sbjct: 604 GSRRKPASPGRT 615
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 41.6 bits (96), Expect = 6e-04
Identities = 28/64 (43%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 180 PERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPR 239
PERP T A P+ QP PPP QP RS EPE P P A A AAP
Sbjct: 215 PERPLAATSAAPPPQPQPQPPP----QPEPRSVPQPEPE----PEPEREATPTPAPAAPE 266
Query: 240 SAPA 243
PA
Sbjct: 267 EPPA 270
Score = 33.9 bits (76), Expect = 0.13
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 173 KPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQ 206
+P PER TPAP AP +PP PP CQ
Sbjct: 245 QPEPEPEPEREATPTPAPAAPE-EPPAPPEFRCQ 277
Score = 28.1 bits (61), Expect = 7.3
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 177 IENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEP----ERRAPPRP----ANP 228
++ R R PG P +PPPP P S + +P E + PRP A P
Sbjct: 545 LQRHHREQRSGAGPGPPP-EPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSGAGP 603
Query: 229 AKRERAAAAPRS 240
R + A+ R+
Sbjct: 604 GSRRKPASPGRT 615
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 41.2 bits (95), Expect = 8e-04
Identities = 27/73 (36%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 171 PEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAK 230
P PA P P PAP P L PPPPP GS SS+C P P P
Sbjct: 708 PNSPA----PPNPGGPPPAPPPPGLAPPPPPGLFFGLGSSSSQCPRKPAIEPSCPMKPLY 763
Query: 231 RERAAAAPRSAPA 243
R + RS A
Sbjct: 764 WTRIQISDRSQNA 776
Score = 30.4 bits (67), Expect = 1.5
Identities = 35/131 (26%), Positives = 40/131 (30%), Gaps = 14/131 (10%)
Query: 127 SQQVTGNSFSSDSNKELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENPER-PC- 184
S Q+ + S +L N IH S P PA I P P
Sbjct: 602 SNQLVPKKLNISSLSQLSPPNDHKDIHAALQPMEGMASNQQKALPPPPASIPPPPPLPSG 661
Query: 185 --RRTPAP-------GAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAA 235
+PAP G P PPPPP P S P PP P +PA
Sbjct: 662 LGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGP---PPPPPPPPLPNSPAPPNPGG 718
Query: 236 AAPRSAPAAAA 246
P P A
Sbjct: 719 PPPAPPPPGLA 729
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 40.8 bits (94), Expect = 0.001
Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 16/91 (17%)
Query: 164 STLPSC-GPEKPARIENPERPC------RRTPAPGAPRLQP---PPPPSCSC------QP 207
S P C P PAR P PC RR+P P P Q P PSC P
Sbjct: 342 SPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSP 401
Query: 208 GSRSSECLEPERRAPPRPANPAKRERAAAAP 238
S + P+RR+P P+ PA + R P
Sbjct: 402 VPPSCQSPSPQRRSPVPPSCPAPQPRPPPPP 432
Score = 32.3 bits (72), Expect = 0.39
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 170 GPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPA 229
G ++ + + P + P+P P PP P C + P+RR+P P
Sbjct: 330 GGQRHSPLSQRHSPAPQCPSPSPPARAAPPCPPC---------QSPVPQRRSPVPPCPSP 380
Query: 230 KRERAAAAP 238
++ R+ A+P
Sbjct: 381 QQRRSPASP 389
>gi|58331144 proline rich region 18 [Homo sapiens]
Length = 295
Score = 40.8 bits (94), Expect = 0.001
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 171 PEKPARIEN---PERPCRRTPA---PGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPR 224
P++P + + P +R PA PG R QPP PP S P + S P APPR
Sbjct: 37 PQRPEGLLSSSWPSATLKRPPARRGPGLDRTQPPAPPGVS--PQALPSRARAPATCAPPR 94
Query: 225 PA----NPAKRERAAAAPRSAPAAA 245
PA +PA+ AA + + AA
Sbjct: 95 PAGSGHSPARTTYAATSAGTGTTAA 119
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 39.7 bits (91), Expect = 0.002
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 167 PSCGPEKPARIENPERPCRRTPAPGAPRLQP----PPPPSCSCQPGSRSSECLEPERRAP 222
P C P + R + C PAPG P QP PPPP+ QP C +RAP
Sbjct: 73 PPCSPRRGRRGRPTQEVC---PAPG-PCAQPAGTCPPPPTGEKQPRPHGFRCSHGSKRAP 128
Query: 223 PRPANPAKRERA--AAAPR 239
PA+R A A PR
Sbjct: 129 ALLGAPARRPPAHIPAQPR 147
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 39.7 bits (91), Expect = 0.002
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 167 PSCGPEKPARIENPERPCRRTPAPGAPRLQP----PPPPSCSCQPGSRSSECLEPERRAP 222
P C P + R + C PAPG P QP PPPP+ QP C +RAP
Sbjct: 73 PPCSPRRGRRGRPTQEVC---PAPG-PCAQPAGTCPPPPTGEKQPRPHGFRCSHGSKRAP 128
Query: 223 PRPANPAKRERA--AAAPR 239
PA+R A A PR
Sbjct: 129 ALLGAPARRPPAHIPAQPR 147
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 39.7 bits (91), Expect = 0.002
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 167 PSCGPEKPARIENPERPCRRTPAPGAPRLQP----PPPPSCSCQPGSRSSECLEPERRAP 222
P C P + R + C PAPG P QP PPPP+ QP C +RAP
Sbjct: 73 PPCSPRRGRRGRPTQEVC---PAPG-PCAQPAGTCPPPPTGEKQPRPHGFRCSHGSKRAP 128
Query: 223 PRPANPAKRERA--AAAPR 239
PA+R A A PR
Sbjct: 129 ALLGAPARRPPAHIPAQPR 147
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 13/79 (16%)
Query: 150 NCIHLLFTQELSNLSTLPSCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGS 209
NC+ L+ +E N++T P +TP P P PPPPPS C
Sbjct: 5 NCVSLVSDKENGNIATAPGF-------------MIGQTPPPAPPPPPPPPPPSPPCSCSR 51
Query: 210 RSSECLEPERRAPPRPANP 228
P PP P P
Sbjct: 52 EECPSSPPPPPPPPLPGEP 70
>gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo
sapiens]
Length = 299
Score = 39.3 bits (90), Expect = 0.003
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 168 SCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCS-CQPGSRSSECLEPERRAPPRPA 226
SC + + R CR PG+P PPP P+ S C P R RRA P+
Sbjct: 25 SCLSDLDGGVALEPRACR---PPGSPGRAPPPTPAPSGCDPRLRPIIL----RRARSLPS 77
Query: 227 NPAKRERAAAAPRSA 241
+P +R++AA AP +A
Sbjct: 78 SPERRQKAAGAPGAA 92
>gi|16933557 dachsous 1 precursor [Homo sapiens]
Length = 3298
Score = 39.3 bits (90), Expect = 0.003
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 15/66 (22%)
Query: 175 ARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERA 234
AR+++ RPC P APR+ PPP + PG++S PP+PAN A RA
Sbjct: 3184 ARLKDEARPC-----PPAPRIDPPPLITAVAHPGAKS---------VPPKPANTA-AARA 3228
Query: 235 AAAPRS 240
P S
Sbjct: 3229 IFPPAS 3234
>gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo
sapiens]
Length = 408
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 159 ELSNLSTLPSCGPEKPARIENPERPCRRTPAPG---APRLQPPPPPSCSCQPGS-RSSEC 214
E+S+ S P P I P RP R P PG APR + P P + GS R
Sbjct: 46 EMSSRSLARPVSPSAPRSIA-PARPGARPPRPGRPLAPRARQPVPHRAVPRQGSLREPLP 104
Query: 215 LEPERRAPPR--PANPAKRERAAAAPRSAPAAAA 246
RR PP P +P+ R R A A + + AA A
Sbjct: 105 SRRGRRGPPGHAPPSPSLRRRGARALQPSAAARA 138
>gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo
sapiens]
Length = 408
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 159 ELSNLSTLPSCGPEKPARIENPERPCRRTPAPG---APRLQPPPPPSCSCQPGS-RSSEC 214
E+S+ S P P I P RP R P PG APR + P P + GS R
Sbjct: 46 EMSSRSLARPVSPSAPRSIA-PARPGARPPRPGRPLAPRARQPVPHRAVPRQGSLREPLP 104
Query: 215 LEPERRAPPR--PANPAKRERAAAAPRSAPAAAA 246
RR PP P +P+ R R A A + + AA A
Sbjct: 105 SRRGRRGPPGHAPPSPSLRRRGARALQPSAAARA 138
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 38.9 bits (89), Expect = 0.004
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 159 ELSNLSTLPSCGPEKPARIENPERP----CRRTPAPGAPRLQPPPPPSCSCQPGSRSSEC 214
E S LS P P P E+P P R +P P RL PPP S P S
Sbjct: 622 EASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTS 681
Query: 215 LEPE--RRAPP---RPANPAKRERAAAAP 238
PE R +PP P +P + A+ P
Sbjct: 682 PPPEASRLSPPPEDSPTSPPPEDSPASPP 710
Score = 35.0 bits (79), Expect = 0.060
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 11/111 (9%)
Query: 141 KELQKGNAKNCIHLLFTQELSNLSTLPSCGPEKPARIENPERPCRRTP------APGAPR 194
+EL +HL E S LS P P P +P P +P +P +P
Sbjct: 472 EELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPA 531
Query: 195 LQPP---PPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRSAP 242
L+ P PP + P S P P P P + R + P +P
Sbjct: 532 LETPLSPPPEASPLSPPFEESPLSPPPEELPTSP--PPEASRLSPPPEESP 580
Score = 33.9 bits (76), Expect = 0.13
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 163 LSTLPSCGPEKPARIENPERP----CRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPE 218
LS P P P E+P P +P P A RL PPP S P S PE
Sbjct: 536 LSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPE 595
Query: 219 --RRAPP---RPANPAKRERAAAAPRSA 241
R PP P +P E + P A
Sbjct: 596 ASRLFPPFEESPLSPPPEESPLSPPPEA 623
Score = 32.7 bits (73), Expect = 0.30
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 159 ELSNLSTLPSCGPEKPARIENPERP----CRRTPAPGAPRLQPPPPPSCSCQPGSRSSEC 214
E+S LS LP P E+P P +P P A RL PPP S + P S
Sbjct: 649 EVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPAS 708
Query: 215 LEPE 218
PE
Sbjct: 709 PPPE 712
Score = 30.8 bits (68), Expect = 1.1
Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 166 LPSCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRP 225
+P P + + + P +P P A RL PPP P S E L R P
Sbjct: 438 MPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEE----LPASPLPEALHLSRPLEESP 493
Query: 226 ANPAKRERAAAAP 238
+P E + P
Sbjct: 494 LSPPPEESPLSPP 506
Score = 30.4 bits (67), Expect = 1.5
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 171 PEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSC-QPGSRSSECLEPERRAPPRPANPA 229
P+ P P+ P P A L P PP +PGS + +P PRP P
Sbjct: 2340 PQSPGLGLRPQEP------PPAQALAPSPPSHPDIFRPGSYTDPYAQPP--LTPRPQPPP 2391
Query: 230 KRERAAAAPRSAPA 243
A PRS P+
Sbjct: 2392 PESCCALPPRSLPS 2405
Score = 30.4 bits (67), Expect = 1.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 190 PGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRSAPAAA 245
P PR QPPPP SC P S +P R P P + + ++ PR A A
Sbjct: 2382 PLTPRPQPPPPESCCALP--PRSLPSDPFSRVPASPQSQSS-SQSPLTPRPLSAEA 2434
Score = 28.9 bits (63), Expect = 4.3
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 167 PSCGPEKPARIENPERPCRRTPAPGAPRLQPP-------PPPS---CSCQPGSRSSECLE 216
P+ P + +R+ P +P P A L P PPP S P S LE
Sbjct: 457 PTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLE 516
Query: 217 PERRAPPR--PANPAKRERAAAAPRSAP 242
+PP P +PA + P ++P
Sbjct: 517 ESPLSPPEESPPSPALETPLSPPPEASP 544
Score = 28.5 bits (62), Expect = 5.6
Identities = 23/85 (27%), Positives = 30/85 (35%), Gaps = 14/85 (16%)
Query: 171 PEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPE-----------R 219
P + + + P +P P A RL PPP S P S PE R
Sbjct: 602 PFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSR 661
Query: 220 RAPP---RPANPAKRERAAAAPRSA 241
+PP P +P E + P A
Sbjct: 662 LSPPPEESPLSPPPEESPTSPPPEA 686
Score = 28.5 bits (62), Expect = 5.6
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 171 PEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRS-----SECLEPERRAPP-R 224
P+ P R+ P P G + P PPPS +P S S L E + PP
Sbjct: 4283 PQGPPRLPAPPGALSTGPVLGP--VHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTH 4340
Query: 225 PANPAKRERAAAAP--RSAPAAA 245
P P + P R +PAAA
Sbjct: 4341 PGTPKPQGPTLEPPPGRVSPAAA 4363
>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
sapiens]
Length = 193
Score = 38.5 bits (88), Expect = 0.005
Identities = 30/80 (37%), Positives = 33/80 (41%), Gaps = 13/80 (16%)
Query: 166 LPSCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRP 225
+P KP E T P P L PPP PG+R E ERRAPPRP
Sbjct: 82 VPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPT---PGNRGGE-RRGERRAPPRP 137
Query: 226 ANPAKRERAAAAPRSAPAAA 245
A APR +P AA
Sbjct: 138 ---------AGAPRGSPMAA 148
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 38.1 bits (87), Expect = 0.007
Identities = 32/84 (38%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Query: 166 LPSCGPEKPARIENPERPCRRTPAPGAPRLQPPP---------PPSCSCQPGSRSSECLE 216
LP E PA +++ RP PG+P QPPP PPS SC PG S C
Sbjct: 777 LPQPAGEAPA-VQDVPRPV--ATHPGSPG-QPPPALLPQQVSAPPSSSCPPGLEHSLC-- 830
Query: 217 PERRAPPRPANPAKRERAAAAPRS 240
P +PP P PA +E P S
Sbjct: 831 PSSPSPPLP--PATQEPTCLQPCS 852
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.1 bits (87), Expect = 0.007
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 180 PERPCRRTPA--PGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAA 237
P P + PA P P LQPPP P +C+ + SE L+ + P E A
Sbjct: 798 PGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAH-SELLDAASSSSSSSCPPCSPEPGREA 856
Query: 238 PRSAPAAAA 246
P PAAAA
Sbjct: 857 PGPEPAAAA 865
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.1 bits (87), Expect = 0.007
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 180 PERPCRRTPA--PGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAA 237
P P + PA P P LQPPP P +C+ + SE L+ + P E A
Sbjct: 798 PGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAH-SELLDAASSSSSSSCPPCSPEPGREA 856
Query: 238 PRSAPAAAA 246
P PAAAA
Sbjct: 857 PGPEPAAAA 865
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.1 bits (87), Expect = 0.007
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 180 PERPCRRTPA--PGAPRLQPPPPPSCSCQPGSRSSECLEPERRAPPRPANPAKRERAAAA 237
P P + PA P P LQPPP P +C+ + SE L+ + P E A
Sbjct: 798 PGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAH-SELLDAASSSSSSSCPPCSPEPGREA 856
Query: 238 PRSAPAAAA 246
P PAAAA
Sbjct: 857 PGPEPAAAA 865
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 38.1 bits (87), Expect = 0.007
Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 161 SNLSTLPSCGP-----EKPARIENPE-----RPCR---RTPAPGAPRLQPPPPPSCSCQP 207
S L T PS P + P E P RP R RTP P + + P + P
Sbjct: 1031 SGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLP 1090
Query: 208 GSRSSECLEPERRAPPRPANPAKRERAAAAP-----RSAPAAAA 246
++ LEP+R PPRP P R P RS P+ A
Sbjct: 1091 QKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQPSPQA 1134
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 170 GPEKPARIENPERPCRRTPAPGAPRLQPPPPP--SCSCQPGSRSSECLEPERRAPPRPAN 227
GP + +RP R+TP AP +PPPPP S S G S+ EP +P RP
Sbjct: 352 GPLDGSPYAQVQRPPRQTPP--APSPEPPPPPMLSVSSDSGHSSTLTTEPAAESPGRPP- 408
Query: 228 PAKRER 233
P ER
Sbjct: 409 PTAAER 414
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 170 GPEKPARIENPERPCRRTPAPGAPRLQPPPPP--SCSCQPGSRSSECLEPERRAPPRPAN 227
GP + +RP R+TP AP +PPPPP S S G S+ EP +P RP
Sbjct: 476 GPLDGSPYAQVQRPPRQTPP--APSPEPPPPPMLSVSSDSGHSSTLTTEPAAESPGRPP- 532
Query: 228 PAKRER 233
P ER
Sbjct: 533 PTAAER 538
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 170 GPEKPARIENPERPCRRTPAPGAPRLQPPPPP--SCSCQPGSRSSECLEPERRAPPRPAN 227
GP + +RP R+TP AP +PPPPP S S G S+ EP +P RP
Sbjct: 486 GPLDGSPYAQVQRPPRQTPP--APSPEPPPPPMLSVSSDSGHSSTLTTEPAAESPGRPP- 542
Query: 228 PAKRER 233
P ER
Sbjct: 543 PTAAER 548
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 38.1 bits (87), Expect = 0.007
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Query: 145 KGNAKNCIHLLFTQELSNLSTLPSCGPE------KPARIENPERPCRRTPAPGAPRLQPP 198
+G N +F + + S +PS + +PAR P+ P P P AP P
Sbjct: 2756 QGPFSNSSEKVFVRGTQDSSAVPSAAHQEAPVTSRPARARPPDSPTSLAP-PLAP--AAP 2812
Query: 199 PPPSCSCQPGS---RSSECLEPERRAPPRPANPAKRERAAAAPRSA 241
PPS + P S S+ L + P P P +R R A R A
Sbjct: 2813 TPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHRGLQAARPA 2858
Score = 32.7 bits (73), Expect = 0.30
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 158 QELSNLSTLPSCGPEKPAR--IENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECL 215
QE +LS L P PAR P P P+ P P PP + QP +
Sbjct: 2162 QESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPP---APQPAQDKAPEP 2218
Query: 216 EPERRAPPRPANPAKRERAAAAP 238
PE +PA P + + A P
Sbjct: 2219 RPEPVRASKPAPPPQALQTLALP 2241
Score = 31.2 bits (69), Expect = 0.86
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 191 GAPRLQPPPPPSC--SCQPGSRSSECLEPERRAPPRPANPAKRERAAAAPRSAPAAAA 246
GA RLQ P S QP S P R + P+P+ P E +A P AP A
Sbjct: 2157 GARRLQESPSLSALSEAQPSS-------PARPSAPKPSTPKSAEPSATTPSDAPQPPA 2207
Score = 29.6 bits (65), Expect = 2.5
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 152 IHLLFTQELSNLSTLPSCGPEKPARIENPERPCRRTPAPGAPRLQPPPPPSCSCQPGSRS 211
+ L F QEL + S E E+ +R P+P +P PP S ++
Sbjct: 490 LELRFAQELGRIRRSTS-REELVRSHESLRATLQRAPSPR----EPGEPPLFSRPSTPKT 544
Query: 212 SECLEPERRAPPRPANPAKRERAAAAPRS 240
S + P PP P++ K PRS
Sbjct: 545 SRAVSPAAAQPPSPSSAEKPGDEPGRPRS 573
Score = 28.9 bits (63), Expect = 4.3
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 164 STLPSCGPEKPAR----IENPERPCRRTPAPGAPRL 195
S LP GP + R + E P RR+P+PGA RL
Sbjct: 2018 SALPRAGPRELGRGLHKAASVELPQRRSPSPGATRL 2053
Score = 28.5 bits (62), Expect = 5.6
Identities = 47/188 (25%), Positives = 71/188 (37%), Gaps = 27/188 (14%)
Query: 67 EVGSSQGTPSTYGSTAMAAAPGGMPLFFPARLWQSWLTNPLCTVLSTEEHSILAIIVIHD 126
E GS GT GS A A G P PL V ++ + + A D
Sbjct: 198 EAGSGGGTRRLPGSPRQAQATGAGPRHLGVE--------PL--VRASRANLVGASWGSED 247
Query: 127 SQQVTGNSFSSDSNKELQKGNAKNCIHL------LFTQELSNLSTLPSCGPEKPARIENP 180
S V + + S + L +G A + IH+ L +E L S P +PA+
Sbjct: 248 SLSVASDLYGSAFS--LYRGRALS-IHVSVPQSGLRREEPDLQPQLASEAPRRPAQPPPS 304
Query: 181 ERPCRRTPAPGAPRLQPPPPPSCSCQPGSRSSECLEPERRA--PPRPANPAKRERAAAAP 238
+ P+P + PP PP+ QP + + P RR P P + E+
Sbjct: 305 KSALLPPPSPRVGKRSPPGPPA---QPAATPT---SPHRRTQEPVLPEDTTTEEKRGKKS 358
Query: 239 RSAPAAAA 246
+S+ + A
Sbjct: 359 KSSGPSLA 366
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.127 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,678,828
Number of Sequences: 37866
Number of extensions: 881721
Number of successful extensions: 9873
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 756
Number of HSP's that attempted gapping in prelim test: 6706
Number of HSP's gapped (non-prelim): 3161
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.