LOC100288551 17111

Name: LOC100288551	Sequence: fasta or formatted (170aa)		NCBI GI: 239742102
Description: PREDICTED: hypothetical protein XP_002342436		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 23.5 40 4 C cysteine 1.8 3 1 D aspartate 1.2 2 1 E glutamate 4.1 7 1 F phenylalanine 6.5 11 2 G glycine 8.2 14 2 H histidine 0.0 0 0 I isoleucine 0.0 0 0 K lysine 0.6 1 1 L leucine 9.4 16 2 M methionine 1.2 2 1 N asparagine 0.0 0 0 P proline 7.1 12 1 Q glutamine 0.0 0 0 R arginine 0.6 1 1 S serine 21.2 36 2 T threonine 2.9 5 1 V valine 9.4 16 3 W tryptophan 2.4 4 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342436 LOC100292252 1.000 PREDICTED: hypothetical protein LOC100290134 1.000 PREDICTED: hypothetical protein XP_002346595 LOC100133915 0.091 PREDICTED: hypothetical protein FAM48B1 0.074 hypothetical protein LOC100130302 SNAP91 0.054 synaptosomal-associated protein, 91kDa homolog NUP214 0.050 nucleoporin 214kDa MARCKS 0.047 myristoylated alanine-rich protein kinase C substra... LOC100293501 0.047 PREDICTED: hypothetical protein KRTAP4-6 0.047 PREDICTED: keratin associated protein 4.6 LOC100291178 0.047 PREDICTED: hypothetical protein XP_002347544 LOC100289466 0.047 PREDICTED: hypothetical protein XP_002342181 AMOT 0.044 angiomotin isoform 2 AMOT 0.044 angiomotin isoform 1 FAM71A 0.044 hypothetical protein LOC149647 FOXD1 0.040 forkhead box D1 ITSN1 0.040 intersectin 1 isoform ITSN-s ITSN1 0.040 intersectin 1 isoform ITSN-l SOX4 0.037 SRY (sex determining region Y)-box 4 KRTAP4-9 0.034 PREDICTED: keratin associated protein 4-9 SALL3 0.034 sal-like 3 MLL 0.034 myeloid/lymphoid or mixed-lineage leukemia protein [... GATA4 0.034 GATA binding protein 4 SOX1 0.034 SRY (sex determining region Y)-box 1 MUC5AC 0.034 mucin 5AC WNK1 0.034 WNK lysine deficient protein kinase 1 NR4A1 0.034 nuclear receptor subfamily 4, group A, member 1 [Hom... NR4A1 0.034 nuclear receptor subfamily 4, group A, member 1 [Hom... MUC5B 0.034 mucin 5, subtype B, tracheobronchial C13orf18 0.034 hypothetical protein LOC80183 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.