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Search of human proteins with 239741995
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
(224 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 462 e-130
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 423 e-119
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 52 5e-07
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 52 5e-07
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 52 5e-07
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 49 3e-06
gi|169164474 PREDICTED: hypothetical protein [Homo sapiens] 49 5e-06
gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo sap... 49 5e-06
gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo sap... 49 5e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 48 6e-06
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 47 1e-05
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 45 4e-05
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 45 5e-05
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 45 5e-05
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 45 5e-05
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 45 7e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 44 9e-05
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 44 1e-04
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 44 1e-04
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 44 1e-04
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 44 1e-04
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 44 1e-04
gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo ... 44 1e-04
gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo ... 44 1e-04
gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo ... 44 1e-04
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 44 1e-04
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i... 44 1e-04
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s... 44 1e-04
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 462 bits (1188), Expect = e-130
Identities = 224/224 (100%), Positives = 224/224 (100%)
Query: 1 MGSCSTGFQQQQVFTGYFSVPHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAAR 60
MGSCSTGFQQQQVFTGYFSVPHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAAR
Sbjct: 1 MGSCSTGFQQQQVFTGYFSVPHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAAR 60
Query: 61 GGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQER 120
GGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQER
Sbjct: 61 GGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQER 120
Query: 121 QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG
Sbjct: 121 QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
Query: 181 LRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGPPMAVGTSP 224
LRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGPPMAVGTSP
Sbjct: 181 LRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGPPMAVGTSP 224
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 423 bits (1087), Expect = e-119
Identities = 211/236 (89%), Positives = 213/236 (90%), Gaps = 23/236 (9%)
Query: 12 QVFTGYFSVPHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGL 71
+VFTGYFSVPHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGL
Sbjct: 60 RVFTGYFSVPHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGL 119
Query: 72 GARRAVTAARRG-----------------------EWGRARESRSAALASPRVSNAPTTP 108
GARRAVTAARRG +WGRARESRSAALASPRVSNAPTTP
Sbjct: 120 GARRAVTAARRGGASRPLAGEPWREAARRRPQQCPQWGRARESRSAALASPRVSNAPTTP 179
Query: 109 ASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKP 168
ASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKP
Sbjct: 180 ASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKP 239
Query: 169 PPRPPGTAPAAGLRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGPPMAVGTSP 224
PPRPPGTAPAAGLRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGPPMAVGTSP
Sbjct: 240 PPRPPGTAPAAGLRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGPPMAVGTSP 295
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 51.6 bits (122), Expect = 5e-07
Identities = 54/165 (32%), Positives = 63/165 (38%), Gaps = 17/165 (10%)
Query: 23 GVGKSAGAAAGEEGGARLQATRTWPAGILEGG--PQVAARGGGRGWEGGGLGARRAVTAA 80
G+G G AA G A R G+ + G A RGGG G EGGG GAR + A
Sbjct: 163 GLGAPRGGAAAPRGWGGQGAERL---GVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRA 219
Query: 81 RRGEWGRARESRSAALASP-----RVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAE 135
R+ GR R R+ L S R + A SR P + GR AA A A
Sbjct: 220 RQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR-PHAAVRNSSRGRGAATSVSAAAR 278
Query: 136 PPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
P R G G R+ A G R P P G G
Sbjct: 279 PTR------GGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRG 317
Score = 34.3 bits (77), Expect = 0.089
Identities = 51/152 (33%), Positives = 57/152 (37%), Gaps = 38/152 (25%)
Query: 47 PAGILEGGPQVAARGG--------GRGWEGGGLGARRAVTAARRGE-----WGRARE--- 90
PAG L P+ A GG G + GG G R A RG WG +
Sbjct: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAVRGSGKRRGWGLRPQRVR 158
Query: 91 SRSAALASPRVSNAPTTP---------ASRNPGL--RAQERQSGRRAA-GGGGARAEPPR 138
SR A L +PR A PGL A R G + GGGGAR PPR
Sbjct: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
Query: 139 V--PPCRPAGCSGGNRSRRA--AGAGPRTTRR 166
PP SG R RR G+ R T R
Sbjct: 219 ARQPP------SGRPRPRRTRLLGSAERHTGR 244
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 51.6 bits (122), Expect = 5e-07
Identities = 54/165 (32%), Positives = 63/165 (38%), Gaps = 17/165 (10%)
Query: 23 GVGKSAGAAAGEEGGARLQATRTWPAGILEGG--PQVAARGGGRGWEGGGLGARRAVTAA 80
G+G G AA G A R G+ + G A RGGG G EGGG GAR + A
Sbjct: 163 GLGAPRGGAAAPRGWGGQGAERL---GVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRA 219
Query: 81 RRGEWGRARESRSAALASP-----RVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAE 135
R+ GR R R+ L S R + A SR P + GR AA A A
Sbjct: 220 RQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR-PHAAVRNSSRGRGAATSVSAAAR 278
Query: 136 PPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
P R G G R+ A G R P P G G
Sbjct: 279 PTR------GGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRG 317
Score = 34.7 bits (78), Expect = 0.068
Identities = 51/152 (33%), Positives = 57/152 (37%), Gaps = 38/152 (25%)
Query: 47 PAGILEGGPQVAARGG--------GRGWEGGGLGARRAVTAARRGE-----WGRARE--- 90
PAG L P+ A GG G + GG G R A RG WG +
Sbjct: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVR 158
Query: 91 SRSAALASPRVSNAPTTP---------ASRNPGL--RAQERQSGRRAA-GGGGARAEPPR 138
SR A L +PR A PGL A R G + GGGGAR PPR
Sbjct: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
Query: 139 V--PPCRPAGCSGGNRSRRA--AGAGPRTTRR 166
PP SG R RR G+ R T R
Sbjct: 219 ARQPP------SGRPRPRRTRLLGSAERHTGR 244
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 51.6 bits (122), Expect = 5e-07
Identities = 54/165 (32%), Positives = 63/165 (38%), Gaps = 17/165 (10%)
Query: 23 GVGKSAGAAAGEEGGARLQATRTWPAGILEGG--PQVAARGGGRGWEGGGLGARRAVTAA 80
G+G G AA G A R G+ + G A RGGG G EGGG GAR + A
Sbjct: 163 GLGAPRGGAAAPRGWGGQGAERL---GVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRA 219
Query: 81 RRGEWGRARESRSAALASP-----RVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAE 135
R+ GR R R+ L S R + A SR P + GR AA A A
Sbjct: 220 RQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSR-PHAAVRNSSRGRGAATSVSAAAR 278
Query: 136 PPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
P R G G R+ A G R P P G G
Sbjct: 279 PTR------GGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRG 317
Score = 34.7 bits (78), Expect = 0.068
Identities = 51/152 (33%), Positives = 57/152 (37%), Gaps = 38/152 (25%)
Query: 47 PAGILEGGPQVAARGG--------GRGWEGGGLGARRAVTAARRGE-----WGRARE--- 90
PAG L P+ A GG G + GG G R A RG WG +
Sbjct: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVR 158
Query: 91 SRSAALASPRVSNAPTTP---------ASRNPGL--RAQERQSGRRAA-GGGGARAEPPR 138
SR A L +PR A PGL A R G + GGGGAR PPR
Sbjct: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
Query: 139 V--PPCRPAGCSGGNRSRRA--AGAGPRTTRR 166
PP SG R RR G+ R T R
Sbjct: 219 ARQPP------SGRPRPRRTRLLGSAERHTGR 244
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 49.3 bits (116), Expect = 3e-06
Identities = 58/201 (28%), Positives = 74/201 (36%), Gaps = 39/201 (19%)
Query: 3 SCSTGFQQQQVFTGYFSVPHGVGKSAGAAAGEEGGARLQATRTWPAGILEG----GPQVA 58
S STG + Q G KS A + + Q PAG+ G GP A
Sbjct: 79 SASTGTEVQMKRVG--------PKSWAPAPRRQRASSAQVRAARPAGMAAGTGRSGPGSA 130
Query: 59 ARGGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASP--RVSNAPTTPASRNPGLR 116
G G GW+ A RA A +GRA +AAL+ P R+ + G
Sbjct: 131 RLGLGSGWDPARAVAPRAARALGAALFGRA--VHTAALSGPHCRLRCGARAFYAAAGGAS 188
Query: 117 AQERQSGRRAA---------GGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRK 167
++ RQ GR A GGG + PP +PP A P +
Sbjct: 189 SRRRQRGRNPALIVRGPGPRRGGGLTSAPPGLPP--------------LASPPPFWELPR 234
Query: 168 PPPRPPGTAPAAGLRSVHLLR 188
PPP PP PA R + LR
Sbjct: 235 PPPPPPPPGPALLPRRLRELR 255
Score = 32.3 bits (72), Expect = 0.34
Identities = 45/139 (32%), Positives = 53/139 (38%), Gaps = 25/139 (17%)
Query: 63 GRGWEGGGLGAR--RAVT----AARRGEWGRARESRSAALASPRVSNAPTTPAS-RNPGL 115
G G G GLGA+ R+ T EWG A A L+ R S P PA R+PGL
Sbjct: 306 GPGSFGAGLGAQGPRSSTPECPVVNGSEWGLA-----APLSPERGS--PGRPAFLRSPGL 358
Query: 116 RAQERQSGR--------RAAGGGGARAEPPRVPPCRPAGCSGGNRSRRA---AGAGPRTT 164
G R AG R P R AG G R RR A A +
Sbjct: 359 CGPGPVPGGLSVPTPCGRGAGDFSEADLADRAFPVRGAGPIAGRRRRRGWTFAAALRKGA 418
Query: 165 RRKPPPRPPGTAPAAGLRS 183
R+ PP P +P R+
Sbjct: 419 PREQPPASPAASPCQAPRA 437
>gi|169164474 PREDICTED: hypothetical protein [Homo sapiens]
Length = 259
Score = 48.5 bits (114), Expect = 5e-06
Identities = 57/167 (34%), Positives = 63/167 (37%), Gaps = 29/167 (17%)
Query: 49 GILEGGPQVAARGGGR-GWEGGGLGARRAVTAARRG------------EWGRARESRSAA 95
G E V GG R G GGG G RR A R G W A R +A
Sbjct: 59 GEAEPARSVCGWGGARSGRPGGGAGGRRCARATRGGGGCARATRGGDLGWAVALPHRPSA 118
Query: 96 LASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGG-----GARAEPPRVPPCRPAGCSGG 150
LA P P+ A R R R+ GR +A G GA PR C P GG
Sbjct: 119 LAGP----LPSQTAERQ--ARPLVRELGRGSAAAGCPSLPGATTPRPR-RCCVPRDLWGG 171
Query: 151 NRSRRAAGAGPRTTRRKPPPRPPGTA---PAAGLRSVHLLRIPYKEP 194
S R P + PP GTA PAAG H LR P + P
Sbjct: 172 RESLRVP-FQPTWSWDTPPRNLVGTAQGIPAAGFWPQHALRQPGERP 217
>gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo
sapiens]
Length = 259
Score = 48.5 bits (114), Expect = 5e-06
Identities = 57/167 (34%), Positives = 63/167 (37%), Gaps = 29/167 (17%)
Query: 49 GILEGGPQVAARGGGR-GWEGGGLGARRAVTAARRG------------EWGRARESRSAA 95
G E V GG R G GGG G RR A R G W A R +A
Sbjct: 59 GEAEPARSVCGWGGARSGRPGGGAGGRRCARATRGGGGCARATRGGDLGWAVALPHRPSA 118
Query: 96 LASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGG-----GARAEPPRVPPCRPAGCSGG 150
LA P P+ A R R R+ GR +A G GA PR C P GG
Sbjct: 119 LAGP----LPSQTAERQ--ARPLVRELGRGSAAAGCPSLPGATTPRPR-RCCVPRDLWGG 171
Query: 151 NRSRRAAGAGPRTTRRKPPPRPPGTA---PAAGLRSVHLLRIPYKEP 194
S R P + PP GTA PAAG H LR P + P
Sbjct: 172 RESLRVP-FQPTWSWDTPPRNLVGTAQGIPAAGFWPQHALRQPGERP 217
>gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 259
Score = 48.5 bits (114), Expect = 5e-06
Identities = 57/167 (34%), Positives = 63/167 (37%), Gaps = 29/167 (17%)
Query: 49 GILEGGPQVAARGGGR-GWEGGGLGARRAVTAARRG------------EWGRARESRSAA 95
G E V GG R G GGG G RR A R G W A R +A
Sbjct: 59 GEAEPARSVCGWGGARSGRPGGGAGGRRCARATRGGGGCARATRGGDLGWAVALPHRPSA 118
Query: 96 LASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGG-----GARAEPPRVPPCRPAGCSGG 150
LA P P+ A R R R+ GR +A G GA PR C P GG
Sbjct: 119 LAGP----LPSQTAERQ--ARPLVRELGRGSAAAGCPSLPGATTPRPR-RCCVPRDLWGG 171
Query: 151 NRSRRAAGAGPRTTRRKPPPRPPGTA---PAAGLRSVHLLRIPYKEP 194
S R P + PP GTA PAAG H LR P + P
Sbjct: 172 RESLRVP-FQPTWSWDTPPRNLVGTAQGIPAAGFWPQHALRQPGERP 217
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 48.1 bits (113), Expect = 6e-06
Identities = 45/133 (33%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 54 GPQVAARGGGRGW----EGGGLGARRAVTAARRGEWGRARESRSAALASPRVSN-----A 104
G + + GG GW GG G R R G + S+ SPRV + A
Sbjct: 296 GSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSP--SPRVRDKAAAAA 353
Query: 105 PTTPA--SRNPGLRAQERQSGR--RAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAG 160
PT PA +P R+ GR RAAGG G R R RSR +A A
Sbjct: 354 PTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRR----------RRRRSRSSASAP 403
Query: 161 PRTTRRKPPPRPP 173
R RR+P P PP
Sbjct: 404 RRRGRRRPRPAPP 416
Score = 40.4 bits (93), Expect = 0.001
Identities = 51/177 (28%), Positives = 59/177 (33%), Gaps = 36/177 (20%)
Query: 23 GVGKSAGAAAGEEGGAR-----------------LQATRTWPA-GILEGGPQVAARGGGR 64
G G+ +GA G G A A T PA G P+ A GR
Sbjct: 316 GSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGR 375
Query: 65 GWEG-GGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSG 123
G GG G RR RR R R SRS+A A R PA R+ R
Sbjct: 376 GGRAAGGAGRRR---RRRR----RRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARS 428
Query: 124 RRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
+G G P P R G G R R P RP T+P+ G
Sbjct: 429 SSDSGSGRGAPGPGPEP----------GSERGHGGHGKRAKERPPRARPASTSPSPG 475
Score = 30.8 bits (68), Expect = 0.98
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 90 ESRSAALASP------RVSNAPTTPASRNP------GLRAQERQSGR-RAAGGGGARAEP 136
+SRS + SP R + + + SR+P G + +R G + +G G R
Sbjct: 271 DSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGS 330
Query: 137 PRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAG 180
PP +P+ S R + AA A R K P P + G
Sbjct: 331 AHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQG 374
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 47.4 bits (111), Expect = 1e-05
Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 34/135 (25%)
Query: 75 RAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLR-----AQERQSG------ 123
R T+A R R ++AL +PR+ +P +PG+R A R G
Sbjct: 120 RPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA 179
Query: 124 ---RRAAGGGGAR-------------AEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRK 167
R+AAGGG +R A+ PR RP G RR GAG R
Sbjct: 180 LAARQAAGGGRSRSAFVAGRDAALACAQLPR----RPRGAGARRGMRRRLGAGERPA--- 232
Query: 168 PPPRPPGTAPAAGLR 182
P PR P APA G R
Sbjct: 233 PRPRGPPRAPARGAR 247
Score = 37.4 bits (85), Expect = 0.010
Identities = 39/122 (31%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 40 LQATRTWPAGILEG--GPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRARES----RS 93
L A R P G P V GGG G A A+ A + GR+R + R
Sbjct: 141 LPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200
Query: 94 AALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRS 153
AALA ++ P A R+ RR G G A PR PP PA + R
Sbjct: 201 AALACAQLPRRPRG---------AGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRP 251
Query: 154 RR 155
RR
Sbjct: 252 RR 253
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 47.4 bits (111), Expect = 1e-05
Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 34/135 (25%)
Query: 75 RAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLR-----AQERQSG------ 123
R T+A R R ++AL +PR+ +P +PG+R A R G
Sbjct: 120 RPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA 179
Query: 124 ---RRAAGGGGAR-------------AEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRK 167
R+AAGGG +R A+ PR RP G RR GAG R
Sbjct: 180 LAARQAAGGGRSRSAFVAGRDAALACAQLPR----RPRGAGARRGMRRRLGAGERPA--- 232
Query: 168 PPPRPPGTAPAAGLR 182
P PR P APA G R
Sbjct: 233 PRPRGPPRAPARGAR 247
Score = 37.4 bits (85), Expect = 0.010
Identities = 39/122 (31%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 40 LQATRTWPAGILEG--GPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRARES----RS 93
L A R P G P V GGG G A A+ A + GR+R + R
Sbjct: 141 LPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200
Query: 94 AALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRS 153
AALA ++ P A R+ RR G G A PR PP PA + R
Sbjct: 201 AALACAQLPRRPRG---------AGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRP 251
Query: 154 RR 155
RR
Sbjct: 252 RR 253
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 45.4 bits (106), Expect = 4e-05
Identities = 52/167 (31%), Positives = 64/167 (38%), Gaps = 31/167 (18%)
Query: 59 ARGGGRGWEGGGLGARRA---------VTAARRGEW-GRARESRSAALASPRV------- 101
ARG G+ G G GA RA T RR + AR R+ A RV
Sbjct: 762 ARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRR 821
Query: 102 -SNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGG---NRSRRAA 157
+ A + A R RA++ +S R R P R A S G +R RAA
Sbjct: 822 RAGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAA 881
Query: 158 GAGPRTTRRKPPPRP----------PGTAPAAGLRSVHLLRIPYKEP 194
GP +R P PRP PG A +AG S P K+P
Sbjct: 882 PRGPPNFQRCPAPRPRRRLGVSIVGPGRAHSAGRSSYSPKVPPVKDP 928
Score = 27.7 bits (60), Expect = 8.3
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 109 ASRNPGLRAQERQSGRRAAGGGGARAEPP---RVPPCRPAGCSGGNRSRRAAGAGPRTTR 165
A GLRA R A G R PP + P + G + G ++ A +T R
Sbjct: 687 AQAERGLRADHRAICNEDAAGEAERRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDR 746
Query: 166 RKP--PPRP 172
+P PP P
Sbjct: 747 ARPWSPPAP 755
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 45.1 bits (105), Expect = 5e-05
Identities = 59/188 (31%), Positives = 71/188 (37%), Gaps = 52/188 (27%)
Query: 36 GGARLQATRTWPAGILEG--GPQVAARGG----------GRGW----EGGGLGAR----R 75
G A L+A P G G GP+ A RGG GRG GG GAR
Sbjct: 68 GSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCH 127
Query: 76 AVTAARRGE--WGRARESRSAALASPRVSNA----------PTTPASRNPGLRAQERQSG 123
+ + R W R + R A PR S A P PA+ + G RA +
Sbjct: 128 SPSCCRSSSCAWHRWPQLRGRE-AEPRASPALLICIAPRPRPALPAALHIGARATAGLAA 186
Query: 124 RRA----------AGGGGARAEPPRVPPCRPAGCSGGNRSRRAA---------GAGPRTT 164
+RA A G RA PP P RP G G+ R A GAG R
Sbjct: 187 KRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGG 246
Query: 165 RRKPPPRP 172
++ PPRP
Sbjct: 247 AQRIPPRP 254
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 45.1 bits (105), Expect = 5e-05
Identities = 59/188 (31%), Positives = 71/188 (37%), Gaps = 52/188 (27%)
Query: 36 GGARLQATRTWPAGILEG--GPQVAARGG----------GRGW----EGGGLGAR----R 75
G A L+A P G G GP+ A RGG GRG GG GAR
Sbjct: 68 GSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGSGGRGARSRGCH 127
Query: 76 AVTAARRGE--WGRARESRSAALASPRVSNA----------PTTPASRNPGLRAQERQSG 123
+ + R W R + R A PR S A P PA+ + G RA +
Sbjct: 128 SPSCCRSSSCAWHRWPQLRGRE-AEPRASPALLICIAPRPRPALPAALHIGARATAGLAA 186
Query: 124 RRA----------AGGGGARAEPPRVPPCRPAGCSGGNRSRRAA---------GAGPRTT 164
+RA A G RA PP P RP G G+ R A GAG R
Sbjct: 187 KRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGAGGRGG 246
Query: 165 RRKPPPRP 172
++ PPRP
Sbjct: 247 AQRIPPRP 254
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 45.1 bits (105), Expect = 5e-05
Identities = 41/127 (32%), Positives = 51/127 (40%), Gaps = 22/127 (17%)
Query: 87 RARESRSAALASPRVSNAPT--------TPAS--RNPGL---------RAQERQSGRRAA 127
R R + A PR+ AP PAS R PGL RA +++ R AA
Sbjct: 1314 RERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAA 1373
Query: 128 GGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAGLRSVHLL 187
G R E P P GG+ + A G +P PRPPG APA R +
Sbjct: 1374 GSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARAGPRPGPRPPGGAPA---RKAAVA 1430
Query: 188 RIPYKEP 194
P+K P
Sbjct: 1431 PGPWKVP 1437
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 44.7 bits (104), Expect = 7e-05
Identities = 46/146 (31%), Positives = 52/146 (35%), Gaps = 29/146 (19%)
Query: 61 GGGRGWEGG------GLGARRAVTAAR---------RGEWGRARESRSAALASPRVSNAP 105
GGG G +G G R T AR R GRA+ AA A P + P
Sbjct: 11 GGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVP---SPP 67
Query: 106 TTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPC--RPAGCSGGNRSRRAAGAGPRT 163
P LR + GRR +P PP RP G R R G P
Sbjct: 68 AAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNP 127
Query: 164 TRRKPPPRPPG---------TAPAAG 180
+RR PP P G T PAAG
Sbjct: 128 SRRLPPAPPGGRRTWLSALATGPAAG 153
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 44.3 bits (103), Expect = 9e-05
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 68 GGGLGARRAVTAARRGEWG-RARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRA 126
GGG GA ++A RG+ RA++ + +S R +R PG + SG +
Sbjct: 1356 GGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPG---MERQNRRPGPGGKAGSSGSSS 1412
Query: 127 AGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPG 174
GGGG P G +G R + + P+ R P RPPG
Sbjct: 1413 GGGGGG-----------PGGRTGPGRGDKRSWPSPKNRSRPPEERPPG 1449
Score = 33.1 bits (74), Expect = 0.20
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 21/160 (13%)
Query: 73 ARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGA 132
A+ +VT G+ GRA S+ L+ PT A+ + A+ER+S +++G G +
Sbjct: 143 AQASVTHGAHGDGGRA----SSLLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPS 198
Query: 133 RAEPPRVPPCRPAGCSG-----GNRSRRAAGAGPRTTRRKPPPRPPGTAPAAGLRSVHLL 187
P R G G G S+ G PR + P PP P G+ +
Sbjct: 199 -LRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ--PSGPPQFPPYRGMMPPFMY 255
Query: 188 --RIPYKEPLLVHQNYRGPSAQLPQTL-------AVGPPM 218
+P+ P YR P+ P GPPM
Sbjct: 256 PPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPM 295
Score = 31.2 bits (69), Expect = 0.75
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 98 SPRVSNAPTTPASRNPGLRAQER----QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRS 153
S V+ T P + P + ++GR+ A G G+ + P PP R + R+
Sbjct: 870 SDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPP-PPRRES------RT 922
Query: 154 RRAAGAGPRTTRRKPPPRPPGTAP 177
G P ++RR PP PG P
Sbjct: 923 ETRWGPRPGSSRRGIPPEEPGAPP 946
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 43.9 bits (102), Expect = 1e-04
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 23 GVGKSAGAAAGEE--GGARLQATRTWPAGILEGGPQV---AARGGGRGWEGGGLGARRAV 77
G G+ AAAG + GG + R G + A + G + G GA++A
Sbjct: 102 GGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAA 161
Query: 78 TAAR-RGEWGRARESRSAALASPRVSNAPTTPASRNPG---LRAQERQSGRRAAGGGGAR 133
AA + + G + +AA A R P +++ G + ++R++ R G R
Sbjct: 162 AAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGR 221
Query: 134 AEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRK 167
+ R RP +GG +SRR G P+ RR+
Sbjct: 222 RKKHR----RPKPAAGGAKSRRGGGKKPQKQRRR 251
Score = 42.0 bits (97), Expect = 4e-04
Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 24/159 (15%)
Query: 23 GVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAA------RGGGR---GWEGGGLGA 73
G SA AA G+E AR + R +GG A R G + G GG GA
Sbjct: 670 GSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGA 729
Query: 74 RRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGAR 133
+ + + +SRS A+ S+ R G + +SG +A GG +
Sbjct: 730 KSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGG--GAKSRSGEKAVTAGGQK 787
Query: 134 A------EPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRR 166
A +PPRV S G R ++AA G + RR
Sbjct: 788 AAAAGGKKPPRVK-------SRGGRGQKAAAGGKKPLRR 819
Score = 40.0 bits (92), Expect = 0.002
Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 9/151 (5%)
Query: 21 PHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGW--EGGGLGARRAVT 78
P G++A AA GG + + AG+ + + GG + W + G GA+
Sbjct: 575 PRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSR---SGDGGKKAWRQKAAGTGAKSRKK 631
Query: 79 AARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPR 138
RRG+ A ++ A + + P + P E AA G AE +
Sbjct: 632 PWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESS----AAAAVGQEAEARK 687
Query: 139 VPPCRPAGCSGGNRSRRAAGAGPRTTRRKPP 169
P R A G A G P R K P
Sbjct: 688 KPRRRRAKSRGDGGQNAAVGINPWQRRGKKP 718
Score = 38.1 bits (87), Expect = 0.006
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 14/146 (9%)
Query: 26 KSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGEW 85
+ AA G++ ARL+ + AG E G G E G G ++A A +
Sbjct: 61 RQKAAAGGKK--ARLRGQKGAVAG-KEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLG 117
Query: 86 GRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPA 145
GR R+ R R S+ P RAQ+ + G GA+ +
Sbjct: 118 GRGRKPR-------RRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQ----KAAAAAGV 166
Query: 146 GCSGGNRSRRAAGAGPRTTRRKPPPR 171
GG + ++AA AG ++ K P R
Sbjct: 167 KSQGGEKPQKAAAAGAKSRSGKKPRR 192
Score = 36.6 bits (83), Expect = 0.018
Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 31/160 (19%)
Query: 21 PHGVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAA 80
P + A AA GG++ R GP+ A GG+ GGG RR A
Sbjct: 407 PRRRAQKAPAAKPRGGGSKKPRRR---------GPKAAKSRGGKSRSGGGKKPRRRGQKA 457
Query: 81 R----------RGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGG 130
R RG+ + R+ SAA R + + +N R Q+ ++ A
Sbjct: 458 RQKAAEAGAESRGDKKQGRQKASAAGTKSR-GGGLKSHSGKNLWRRGQKAEAAGEKATAA 516
Query: 131 GA----RAEPPRVPPCRPAGCS--GGNRSRR-----AAGA 159
GA R +P R P S GG++SR+ AAGA
Sbjct: 517 GAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGA 556
Score = 34.7 bits (78), Expect = 0.068
Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 19/135 (14%)
Query: 42 ATRTWPAGILEGGPQVAARGGGRG--WEGGGLGARRAVTAARRGEWGRARESRSAALASP 99
A + W G G GG+ W+ + AA G+ AR+ A
Sbjct: 643 AEKAWATGATSRG------SGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKS 696
Query: 100 RVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGA 159
R NP R ++ ++ GGGGA++ SGG +SR + GA
Sbjct: 697 RGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRG-----------SGGAKSRGSGGA 745
Query: 160 GPRTTRRKPPPRPPG 174
R+ ++ + G
Sbjct: 746 KSRSGKKAAASKSHG 760
Score = 33.5 bits (75), Expect = 0.15
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 17/120 (14%)
Query: 60 RGGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALAS------------PRVSNAPTT 107
RGGG + +G + RRG+ R +++ +A S R +
Sbjct: 342 RGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKK 401
Query: 108 PASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRK 167
P +NP RAQ+ + + GGG++ R P A S G +SR G PR +K
Sbjct: 402 PRWQNPRRRAQKAPAAK--PRGGGSKKPRRRGP---KAAKSRGGKSRSGGGKKPRRRGQK 456
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 43.9 bits (102), Expect = 1e-04
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 97 ASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRA 156
A+P PT P +R P ++E GR + G G A+P +P PA
Sbjct: 205 AAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP-AQPAHLPLPGPAHSPAPPAPELR 263
Query: 157 AGAGPRTTR-RKPPPRPPGTAPAAGLRSVHLLR 188
G P +T R+P PR P A +G +V L R
Sbjct: 264 EGRAPGSTAGRRPRPREPQAAEESGCATVGLRR 296
Score = 30.0 bits (66), Expect = 1.7
Identities = 35/130 (26%), Positives = 41/130 (31%), Gaps = 29/130 (22%)
Query: 73 ARRAVTAARRGEWGRARESRSAALASP-------------------RVSNAPTTPASRNP 113
AR +R G GRA ESR + A P R AP + A R P
Sbjct: 218 ARPPAYESREGPRGRA-ESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRP 276
Query: 114 GLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGG---------NRSRRAAGAGPRTT 164
R + A G R + R +P SG R R G G T
Sbjct: 277 RPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTH 336
Query: 165 RRKPPPRPPG 174
P PPG
Sbjct: 337 ATHGPASPPG 346
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 43.9 bits (102), Expect = 1e-04
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 97 ASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRA 156
A+P PT P +R P ++E GR + G G A+P +P PA
Sbjct: 205 AAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP-AQPAHLPLPGPAHSPAPPAPELR 263
Query: 157 AGAGPRTTR-RKPPPRPPGTAPAAGLRSVHLLR 188
G P +T R+P PR P A +G +V L R
Sbjct: 264 EGRAPGSTAGRRPRPREPQAAEESGCATVGLRR 296
Score = 30.0 bits (66), Expect = 1.7
Identities = 35/130 (26%), Positives = 41/130 (31%), Gaps = 29/130 (22%)
Query: 73 ARRAVTAARRGEWGRARESRSAALASP-------------------RVSNAPTTPASRNP 113
AR +R G GRA ESR + A P R AP + A R P
Sbjct: 218 ARPPAYESREGPRGRA-ESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRP 276
Query: 114 GLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGG---------NRSRRAAGAGPRTT 164
R + A G R + R +P SG R R G G T
Sbjct: 277 RPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTH 336
Query: 165 RRKPPPRPPG 174
P PPG
Sbjct: 337 ATHGPASPPG 346
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 43.9 bits (102), Expect = 1e-04
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 97 ASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRA 156
A+P PT P +R P ++E GR + G G A+P +P PA
Sbjct: 205 AAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGP-AQPAHLPLPGPAHSPAPPAPELR 263
Query: 157 AGAGPRTTR-RKPPPRPPGTAPAAGLRSVHLLR 188
G P +T R+P PR P A +G +V L R
Sbjct: 264 EGRAPGSTAGRRPRPREPQAAEESGCATVGLRR 296
Score = 30.0 bits (66), Expect = 1.7
Identities = 35/130 (26%), Positives = 41/130 (31%), Gaps = 29/130 (22%)
Query: 73 ARRAVTAARRGEWGRARESRSAALASP-------------------RVSNAPTTPASRNP 113
AR +R G GRA ESR + A P R AP + A R P
Sbjct: 218 ARPPAYESREGPRGRA-ESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRP 276
Query: 114 GLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGG---------NRSRRAAGAGPRTT 164
R + A G R + R +P SG R R G G T
Sbjct: 277 RPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTH 336
Query: 165 RRKPPPRPPG 174
P PPG
Sbjct: 337 ATHGPASPPG 346
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 43.5 bits (101), Expect = 1e-04
Identities = 45/168 (26%), Positives = 56/168 (33%), Gaps = 34/168 (20%)
Query: 71 LGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGG 130
L AR RGE S++ P + T R+ G A E +G AA
Sbjct: 58 LQARTPAPPRERGE--------SSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAA 109
Query: 131 G---------ARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPR---------- 171
PP++P RP G R T R P PR
Sbjct: 110 PHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPP 169
Query: 172 ---PPGTAPAAGLRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGP 216
PPGT G R+ LLR E Q R P+A+LP+ P
Sbjct: 170 RPAPPGTRCCPGARAAQLLR----EAAAAAQGLRAPAARLPEPTRRAP 213
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 43.5 bits (101), Expect = 1e-04
Identities = 45/168 (26%), Positives = 56/168 (33%), Gaps = 34/168 (20%)
Query: 71 LGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGG 130
L AR RGE S++ P + T R+ G A E +G AA
Sbjct: 58 LQARTPAPPRERGE--------SSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAA 109
Query: 131 G---------ARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPR---------- 171
PP++P RP G R T R P PR
Sbjct: 110 PHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPP 169
Query: 172 ---PPGTAPAAGLRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGP 216
PPGT G R+ LLR E Q R P+A+LP+ P
Sbjct: 170 RPAPPGTRCCPGARAAQLLR----EAAAAAQGLRAPAARLPEPTRRAP 213
>gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo
sapiens]
Length = 323
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 64 RGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPG---LRAQER 120
RGW G R++ A+ G RA + ++ TP SR P L +
Sbjct: 95 RGWAPGSRRGARSLPASPLGAQARAA---ACVPGKGGAASRGDTPCSRQPSRSPLAGRSV 151
Query: 121 QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAG 160
++ +R G G P + P RP G G R+RR AG G
Sbjct: 152 RAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
>gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
sapiens]
Length = 323
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 64 RGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPG---LRAQER 120
RGW G R++ A+ G RA + ++ TP SR P L +
Sbjct: 95 RGWAPGSRRGARSLPASPLGAQARAA---ACVPGKGGAASRGDTPCSRQPSRSPLAGRSV 151
Query: 121 QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAG 160
++ +R G G P + P RP G G R+RR AG G
Sbjct: 152 RAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
>gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo
sapiens]
Length = 323
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 64 RGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPG---LRAQER 120
RGW G R++ A+ G RA + ++ TP SR P L +
Sbjct: 95 RGWAPGSRRGARSLPASPLGAQARAA---ACVPGKGGAASRGDTPCSRQPSRSPLAGRSV 151
Query: 121 QSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAG 160
++ +R G G P + P RP G G R+RR AG G
Sbjct: 152 RAPQRRVGAGAGWRGGPGLGPVRPPGWRAGRRTRRTAGPG 191
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 43.5 bits (101), Expect = 1e-04
Identities = 45/168 (26%), Positives = 56/168 (33%), Gaps = 34/168 (20%)
Query: 71 LGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGG 130
L AR RGE S++ P + T R+ G A E +G AA
Sbjct: 58 LQARTPAPPRERGE--------SSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAA 109
Query: 131 G---------ARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPR---------- 171
PP++P RP G R T R P PR
Sbjct: 110 PHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPP 169
Query: 172 ---PPGTAPAAGLRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGP 216
PPGT G R+ LLR E Q R P+A+LP+ P
Sbjct: 170 RPAPPGTRCCPGARAAQLLR----EAAAAAQGLRAPAARLPEPTRRAP 213
>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
isoform [Homo sapiens]
Length = 302
Score = 43.5 bits (101), Expect = 1e-04
Identities = 52/156 (33%), Positives = 64/156 (41%), Gaps = 23/156 (14%)
Query: 23 GVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRG---WEGGGLGARRAVTA 79
G + G +A E+GG Q + P+ + G + ARGGGRG W+ G G
Sbjct: 22 GGSGAGGDSAIEQGG---QGSALAPSPV-SGVRREGARGGGRGRGRWKQAGRGGGVCGRG 77
Query: 80 ARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRV 139
RG GR R R R P S GL G +GGGGA P R
Sbjct: 78 RGRGR-GRGR-GRGRGRGRGR-------PPSGGSGLGGDGGGCGGGGSGGGGA---PRRE 125
Query: 140 PPCRPAGCSG-GNRSRRAAGAGPRTTRRKPPPRPPG 174
P P+G +G G R RA +G R P PPG
Sbjct: 126 PVPFPSGSAGPGPRGPRATESG---KRMDCPALPPG 158
>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
sapiens]
Length = 411
Score = 43.5 bits (101), Expect = 1e-04
Identities = 52/156 (33%), Positives = 64/156 (41%), Gaps = 23/156 (14%)
Query: 23 GVGKSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRG---WEGGGLGARRAVTA 79
G + G +A E+GG Q + P+ + G + ARGGGRG W+ G G
Sbjct: 22 GGSGAGGDSAIEQGG---QGSALAPSPV-SGVRREGARGGGRGRGRWKQAGRGGGVCGRG 77
Query: 80 ARRGEWGRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRV 139
RG GR R R R P S GL G +GGGGA P R
Sbjct: 78 RGRGR-GRGR-GRGRGRGRGR-------PPSGGSGLGGDGGGCGGGGSGGGGA---PRRE 125
Query: 140 PPCRPAGCSG-GNRSRRAAGAGPRTTRRKPPPRPPG 174
P P+G +G G R RA +G R P PPG
Sbjct: 126 PVPFPSGSAGPGPRGPRATESG---KRMDCPALPPG 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,899,549
Number of Sequences: 37866
Number of extensions: 770646
Number of successful extensions: 7782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 1092
Number of HSP's that attempted gapping in prelim test: 5583
Number of HSP's gapped (non-prelim): 2734
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.