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Search of human proteins with 239741956
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741956 PREDICTED: hypothetical protein XP_002342400 [Homo
sapiens]
(163 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753487 PREDICTED: hypothetical protein [Homo sapiens] 335 1e-92
gi|239748063 PREDICTED: hypothetical protein [Homo sapiens] 335 1e-92
gi|239741956 PREDICTED: hypothetical protein XP_002342400 [Homo ... 335 1e-92
gi|153945852 G7c protein [Homo sapiens] 37 0.008
gi|157785645 SPEG complex locus [Homo sapiens] 32 0.24
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 30 0.71
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 30 0.71
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 30 0.71
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 30 0.71
gi|119943102 CREB binding protein isoform b [Homo sapiens] 30 0.71
gi|119943104 CREB binding protein isoform a [Homo sapiens] 30 0.71
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 30 0.71
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 30 0.71
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 30 0.71
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 30 0.71
gi|40068483 SET domain containing 3 isoform b [Homo sapiens] 30 0.92
gi|40068481 SET domain containing 3 isoform a [Homo sapiens] 30 0.92
gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens] 29 1.6
gi|148596992 heart alpha-kinase [Homo sapiens] 29 2.1
gi|58743365 ring finger protein 157 [Homo sapiens] 28 3.5
gi|122937247 unc-13 homolog A [Homo sapiens] 28 3.5
gi|64084766 fidgetin [Homo sapiens] 28 4.6
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 28 4.6
gi|221139921 EF-hand calcium binding domain 8 [Homo sapiens] 27 6.0
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 27 6.0
gi|92859618 sphingomyelin phosphodiesterase 2, neutral [Homo sap... 27 6.0
gi|84626580 hypothetical protein LOC80178 [Homo sapiens] 27 6.0
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 27 6.0
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 27 7.8
gi|169160983 PREDICTED: hypothetical protein [Homo sapiens] 27 7.8
>gi|239753487 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 335 bits (858), Expect = 1e-92
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG 60
MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG
Sbjct: 1 MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG 60
Query: 61 TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG 120
TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG
Sbjct: 61 TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG 120
Query: 121 KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI 163
KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI
Sbjct: 121 KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI 163
>gi|239748063 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 335 bits (858), Expect = 1e-92
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG 60
MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG
Sbjct: 1 MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG 60
Query: 61 TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG 120
TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG
Sbjct: 61 TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG 120
Query: 121 KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI 163
KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI
Sbjct: 121 KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI 163
>gi|239741956 PREDICTED: hypothetical protein XP_002342400 [Homo
sapiens]
Length = 163
Score = 335 bits (858), Expect = 1e-92
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG 60
MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG
Sbjct: 1 MAATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPG 60
Query: 61 TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG 120
TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG
Sbjct: 61 TRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRG 120
Query: 121 KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI 163
KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI
Sbjct: 121 KGVGLAKAMWWTSWGQSIYYVYESRSTVRLSGLGSQLCDLLAI 163
>gi|153945852 G7c protein [Homo sapiens]
Length = 891
Score = 37.0 bits (84), Expect = 0.008
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 73 PRTPTH--LIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRGKGVGLAK-AM 129
P PTH L ++ + PA Q RHTT T + P + P + + Q G GLA +
Sbjct: 815 PVPPTHAFLRLLVSAPAPQDRHTTPTGSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSP 874
Query: 130 WWTSWG 135
WW + G
Sbjct: 875 WWGTVG 880
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 32.0 bits (71), Expect = 0.24
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 2 AATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGT 61
AA A MA T A+ A++ + P ST+ SS I+ ++E+ + P
Sbjct: 786 AADAGSYMATATNELGQATCAASLTVRPGG---STSPFSSPIT-------SDEEYLSPPE 835
Query: 62 RIPVPGSSWSLPRTPTHLIIMATRPAQQAR 91
P PG +W PRTPT M P+Q R
Sbjct: 836 EFPEPGETW--PRTPT----MKPSPSQNRR 859
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 4 TAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRI 63
T P + A TK P + PK +T + + K+PA + ++ +
Sbjct: 328 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 387
Query: 64 PVPGSSWSLPRT-----PTHLIIMATRPAQQARHTT 94
P P ++ S P T PT T P + + TT
Sbjct: 388 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 423
Score = 28.5 bits (62), Expect = 2.7
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 4 TAPMKMAVNT-KSPLAASVASAQMMMPKNICCSTTNSSSVISE-------KKPADSAEEQ 55
T P + A T K P ++ SA PK +TT S+ + K+PA + ++
Sbjct: 219 TTPKEPASTTPKEPTPTTIKSAPTT-PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 277
Query: 56 EMQPGTRIPVPGSSWSLPRTP 76
T+ P P ++ S P TP
Sbjct: 278 PAPTTTKEPAPTTTKSAPTTP 298
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 2 AATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGT 61
A T P + A T A + + PK +T + + K+PA + ++
Sbjct: 271 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTP 330
Query: 62 RIPVPGSSWSLPRTP 76
+ P P + P TP
Sbjct: 331 KEPAPTTKEPAPTTP 345
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 4 TAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRI 63
T P + A TK P + PK +T + + K+PA + ++ +
Sbjct: 369 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 428
Query: 64 PVPGSSWSLPRT-----PTHLIIMATRPAQQARHTT 94
P P ++ S P T PT T P + + TT
Sbjct: 429 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 464
Score = 28.5 bits (62), Expect = 2.7
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 4 TAPMKMAVNT-KSPLAASVASAQMMMPKNICCSTTNSSSVISE-------KKPADSAEEQ 55
T P + A T K P ++ SA PK +TT S+ + K+PA + ++
Sbjct: 260 TTPKEPASTTPKEPTPTTIKSAPTT-PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 318
Query: 56 EMQPGTRIPVPGSSWSLPRTP 76
T+ P P ++ S P TP
Sbjct: 319 PAPTTTKEPAPTTTKSAPTTP 339
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 2 AATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGT 61
A T P + A T A + + PK +T + + K+PA + ++
Sbjct: 312 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTP 371
Query: 62 RIPVPGSSWSLPRTP 76
+ P P + P TP
Sbjct: 372 KEPAPTTKEPAPTTP 386
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 4 TAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRI 63
T P + A TK P + PK +T + + K+PA + ++ +
Sbjct: 421 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 480
Query: 64 PVPGSSWSLPRT-----PTHLIIMATRPAQQARHTT 94
P P ++ S P T PT T P + + TT
Sbjct: 481 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 516
Score = 28.5 bits (62), Expect = 2.7
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 4 TAPMKMAVNT-KSPLAASVASAQMMMPKNICCSTTNSSSVISE-------KKPADSAEEQ 55
T P + A T K P ++ SA PK +TT S+ + K+PA + ++
Sbjct: 312 TTPKEPASTTPKEPTPTTIKSAPTT-PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 370
Query: 56 EMQPGTRIPVPGSSWSLPRTP 76
T+ P P ++ S P TP
Sbjct: 371 PAPTTTKEPAPTTTKSAPTTP 391
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 2 AATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGT 61
A T P + A T A + + PK +T + + K+PA + ++
Sbjct: 364 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTP 423
Query: 62 RIPVPGSSWSLPRTP 76
+ P P + P TP
Sbjct: 424 KEPAPTTKEPAPTTP 438
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 4 TAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRI 63
T P + A TK P + PK +T + + K+PA + ++ +
Sbjct: 462 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 521
Query: 64 PVPGSSWSLPRT-----PTHLIIMATRPAQQARHTT 94
P P ++ S P T PT T P + + TT
Sbjct: 522 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 557
Score = 28.5 bits (62), Expect = 2.7
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 4 TAPMKMAVNT-KSPLAASVASAQMMMPKNICCSTTNSSSVISE-------KKPADSAEEQ 55
T P + A T K P ++ SA PK +TT S+ + K+PA + ++
Sbjct: 353 TTPKEPASTTPKEPTPTTIKSAPTT-PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 411
Query: 56 EMQPGTRIPVPGSSWSLPRTP 76
T+ P P ++ S P TP
Sbjct: 412 PAPTTTKEPAPTTTKSAPTTP 432
Score = 27.7 bits (60), Expect = 4.6
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 2 AATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGT 61
A T P + A T A + + PK +T + + K+PA + ++
Sbjct: 405 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTP 464
Query: 62 RIPVPGSSWSLPRTP 76
+ P P + P TP
Sbjct: 465 KEPAPTTKEPAPTTP 479
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 30.4 bits (67), Expect = 0.71
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 6 PMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPV 65
P M +T + +A + A +Q + P+N S++ + SV + PA + Q PG +P
Sbjct: 735 PNMMGAHTNNMMAQAPAQSQFL-PQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPN 793
Query: 66 P 66
P
Sbjct: 794 P 794
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 30.4 bits (67), Expect = 0.71
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 6 PMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPV 65
P M +T + +A + A +Q + P+N S++ + SV + PA + Q PG +P
Sbjct: 773 PNMMGAHTNNMMAQAPAQSQFL-PQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPN 831
Query: 66 P 66
P
Sbjct: 832 P 832
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 28 MPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHLIIMATRPA 87
+ K C S ++SSS SE+ + S+ E +R SS S P P RP
Sbjct: 14 LEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPE-----PRPQ 68
Query: 88 QQARHTTFTAQNHPAR 103
QQ + + A+ AR
Sbjct: 69 QQPQPRSPAARRAAAR 84
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 28 MPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHLIIMATRPA 87
+ K C S ++SSS SE+ + S+ E +R SS S P P RP
Sbjct: 14 LEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPE-----PRPQ 68
Query: 88 QQARHTTFTAQNHPAR 103
QQ + + A+ AR
Sbjct: 69 QQPQPRSPAARRAAAR 84
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 28 MPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHLIIMATRPA 87
+ K C S ++SSS SE+ + S+ E +R SS S P P RP
Sbjct: 14 LEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPE-----PRPQ 68
Query: 88 QQARHTTFTAQNHPAR 103
QQ + + A+ AR
Sbjct: 69 QQPQPRSPAARRAAAR 84
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 30.4 bits (67), Expect = 0.71
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 28 MPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHLIIMATRPA 87
+ K C S ++SSS SE+ + S+ E +R SS S P P RP
Sbjct: 14 LEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPE-----PRPQ 68
Query: 88 QQARHTTFTAQNHPAR 103
QQ + + A+ AR
Sbjct: 69 QQPQPRSPAARRAAAR 84
>gi|40068483 SET domain containing 3 isoform b [Homo sapiens]
Length = 296
Score = 30.0 bits (66), Expect = 0.92
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 35 STTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTT 94
S T +++ +S K+ + E + + P PG W ++ R Q+ T
Sbjct: 12 SGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWE-EYVQIRTLVEKIRKKQKGLSVT 70
Query: 95 FTAQNHPARGSYHPCLTKWESE 116
F + R Y P L KW SE
Sbjct: 71 FDGK----REDYFPDLMKWASE 88
>gi|40068481 SET domain containing 3 isoform a [Homo sapiens]
Length = 594
Score = 30.0 bits (66), Expect = 0.92
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 35 STTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTT 94
S T +++ +S K+ + E + + P PG W ++ R Q+ T
Sbjct: 12 SGTGATATVSPKEILNLTSELLQKCSSPAPGPGKEWE-EYVQIRTLVEKIRKKQKGLSVT 70
Query: 95 FTAQNHPARGSYHPCLTKWESE 116
F + R Y P L KW SE
Sbjct: 71 FDGK----REDYFPDLMKWASE 88
>gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens]
Length = 1388
Score = 29.3 bits (64), Expect = 1.6
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 9 MAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGS 68
M+ S A+ V SAQ+ M K T S ++++ +A + P R P G+
Sbjct: 450 MSTEQMSATASRVMSAQLTMAKTSGAMPTGSMKAVAKQYKRATASGKMSTPLRRAPTSGA 509
Query: 69 SWSLPRTPT 77
+ P T T
Sbjct: 510 MSTQPVTAT 518
>gi|148596992 heart alpha-kinase [Homo sapiens]
Length = 2170
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 45 EKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPT--HLIIMATRPAQQARHTTFTAQNHPA 102
+K P+ SA + P + + W P T T + ATR + T + HPA
Sbjct: 961 DKSPSPSAADTTATPASYSSIVSFPWEKPTTLTANNECFQATRETEDTSTVTIATEVHPA 1020
Query: 103 R 103
+
Sbjct: 1021 K 1021
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 28.1 bits (61), Expect = 3.5
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 11 VNTKSPL--AASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTR 62
V T SPL + +S + + K++ ST+ +SSV+ E++ S E E Q R
Sbjct: 410 VRTISPLDRLSDSSSQGLKLKKSLSKSTSQNSSVLHEEEDEHSCSESETQLSQR 463
>gi|122937247 unc-13 homolog A [Homo sapiens]
Length = 1791
Score = 28.1 bits (61), Expect = 3.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 103 RGSYHPCLTKWESEAQRGKGVGLAKAMWWTSWGQSIYYVYESRSTVRL 150
+ SY PCL ++ E GK ++ + W + Q + Y E RL
Sbjct: 1151 KNSYTPCLNQFPQELNVGK---ISAEVMWNLFAQDMKYAMEEHDKHRL 1195
>gi|64084766 fidgetin [Homo sapiens]
Length = 759
Score = 27.7 bits (60), Expect = 4.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 36 TTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHLI--IMATRPAQQAR-- 91
T + + V S PAD + PG + S+S +H + + A P+Q+
Sbjct: 129 TASKAGVSSALPPADVSASIGSSPGVASNLTEPSYSSSTCGSHTVPSLHAGLPSQEYAPG 188
Query: 92 ------HTTFTAQNHPARGSYHP 108
H+T+++Q PA S HP
Sbjct: 189 YNGSYLHSTYSSQPAPALPSPHP 211
>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
Length = 696
Score = 27.7 bits (60), Expect = 4.6
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 4 TAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRI 63
+ P MAV +SPL S++S + + +S+ ++ PA A + P I
Sbjct: 146 SVPYGMAVVVRSPLRTSLSSLR----------SEHSNGTVAPDSPASPASDGPALPSPAI 195
Query: 64 PVPGSSWSL 72
P G + SL
Sbjct: 196 PRGGFALSL 204
>gi|221139921 EF-hand calcium binding domain 8 [Homo sapiens]
Length = 1288
Score = 27.3 bits (59), Expect = 6.0
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 10 AVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSS 69
A ++ S L + ASA ++ ++ T S + + A +A P PV S+
Sbjct: 1195 AASSPSSLLSVTASASRLLDSSLPTFLTPQFSFLLRPQSASTAHSTPSVPS---PVSKST 1251
Query: 70 WSLPRTPTHLIIMATRPAQQARHTTFTAQNHPARGSYH 107
TP H++ RP + + T ++ +GS H
Sbjct: 1252 LQGSVTPKHIVSSFERPPRPLKATFMSS----VKGSSH 1285
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 27.3 bits (59), Expect = 6.0
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 20 SVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTHL 79
+V Q++ + +TT + S + + EE++ +P P P SS P P
Sbjct: 242 TVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPK 301
Query: 80 IIMATRPAQQA 90
+ T+P ++A
Sbjct: 302 KSLGTQPPKKA 312
>gi|92859618 sphingomyelin phosphodiesterase 2, neutral [Homo
sapiens]
Length = 423
Score = 27.3 bits (59), Expect = 6.0
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
Query: 78 HLIIMAT-----RPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRGKGVGLAKAMWWT 132
H +MAT P QQ +T + PA S C+ K EA G+G+A+A WW
Sbjct: 272 HEALMATLFVRHSPPQQNPSST----HGPAERSPLMCVLK---EAWTELGLGMAQARWWA 324
Query: 133 SWGQSI 138
++ +
Sbjct: 325 TFASYV 330
>gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
Length = 433
Score = 27.3 bits (59), Expect = 6.0
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 2 AATAPMKMAVNTKSPLAASVASAQMMMPKNICCSTTNSSSVISEKKPADSAEEQEMQPGT 61
A P N + PL A S Q + K + T + ++ A E++ P
Sbjct: 49 ALKPPPGPETNGEDPLPACTPSPQDL--KELEFLTQALEKAVRVRRGITKAGERDKAPSL 106
Query: 62 RI-PVPGSSWSLPRTPTHLIIMA------TRPAQQARHTTFTAQNHPAR 103
+ + SS + P H A TRP + R TT A+ HP R
Sbjct: 107 KSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPER 155
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 27.3 bits (59), Expect = 6.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 30 KNICCSTTNSSSVISEKKPADSAEEQEMQPGTRIPVPGSSWSLPRTPTH 78
K C S+++SSS S +DS +E++ Q R S+ ++ TH
Sbjct: 99 KKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTH 147
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 26.9 bits (58), Expect = 7.8
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 59 PGTRIPVPGSSWSLPRTPTHLIIMATRPAQQARHTTFTAQNH----PARG 104
PG R P PG+ S PR L+ A+ P + A TA H P RG
Sbjct: 177 PGARRPAPGARRSRPR----LLRPASPPPRPAPRRRSTAPRHEGGRPGRG 222
>gi|169160983 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 26.9 bits (58), Expect = 7.8
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 113 WESEAQRGKGVG-----LAKAMWWTSWGQSIYYVYESR 145
WE+E Q G+G G + A WW S +S+ E+R
Sbjct: 22 WETEVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEAR 59
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.123 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,595,929
Number of Sequences: 37866
Number of extensions: 296705
Number of successful extensions: 1115
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1053
Number of HSP's gapped (non-prelim): 87
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.