Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SCAMP3 Sequence: fasta or formatted (347aa) NCBI GI: 16445419
Description:

secretory carrier membrane protein 3 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [321aa] secretory carrier membrane protein 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         43           4
 C cysteine            2.0          7           1
 D aspartate           2.3          8           1
 E glutamate           5.2         18           2
 F phenylalanine       8.1         28           3
 G glycine             5.2         18           2
 H histidine           0.9          3           1
 I isoleucine          3.2         11           1
 K lysine              2.9         10           2
 L leucine             9.8         34           3
 M methionine          2.0          7           1
 N asparagine          4.3         15           2
 P proline             9.2         32           3
 Q glutamine           5.2         18           2
 R arginine            4.9         17           2
 S serine              7.5         26           2
 T threonine           4.6         16           1
 V valine              5.8         20           2
 W tryptophan          1.7          6           1
 Y tyrosine            2.9         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   secretory carrier membrane protein 3 isoform 1 [Homo... 
SCAMP3                0.900   secretory carrier membrane protein 3 isoform 2 [Homo...
SCAMP1                0.482   secretory carrier membrane protein 1 
SCAMP2                0.454   secretory carrier membrane protein 2 
SCAMP5                0.299   secretory carrier membrane protein 5 
SCAMP4                0.277   secretory carrier membrane protein 4 
EPS8                  0.025   epidermal growth factor receptor pathway substrate 8...
BAI1                  0.022   brain-specific angiogenesis inhibitor 1 precursor [...
DGKK                  0.022   diacylglycerol kinase kappa 
FNBP4                 0.022   formin binding protein 4 
FLJ20021              0.020   PREDICTED: hypothetical protein 
FLJ20021              0.020   PREDICTED: hypothetical protein 
FLJ20021              0.020   PREDICTED: hypothetical protein 
SYNJ1                 0.020   synaptojanin 1 isoform a 
SYNJ1                 0.020   synaptojanin 1 isoform b 
SETBP1                0.020   SET binding protein 1 isoform a 
MLL4                  0.020   myeloid/lymphoid or mixed-lineage leukemia 4 
YLPM1                 0.020   YLP motif containing 1 
FOXB2                 0.020   forkhead box B2 
ZNF341                0.020   zinc finger protein 341 
HOXA3                 0.019   homeobox A3 isoform a 
HOXA3                 0.019   homeobox A3 isoform a 
TBX1                  0.019   T-box 1 isoform B 
TBX1                  0.019   T-box 1 isoform C 
TBX1                  0.019   T-box 1 isoform A 
HCN2                  0.019   hyperpolarization activated cyclic nucleotide-gated...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press