Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 116235458
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens]
(443 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens] 916 0.0
gi|189217888 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans... 390 e-108
gi|189217886 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans... 390 e-108
gi|20127609 carbohydrate (N-acetylgalactosamine 4-0) sulfotransf... 390 e-108
gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens] 212 5e-55
gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens] 170 3e-42
gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens] 164 1e-40
gi|4758540 HNK-1 sulfotransferase [Homo sapiens] 157 2e-38
gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens] 144 1e-34
gi|157671949 rearranged L-myc fusion [Homo sapiens] 36 0.080
gi|4557563 excision repair cross-complementing rodent repair def... 32 1.5
gi|16753231 tektin 1 [Homo sapiens] 32 1.5
gi|112821690 G protein-regulated inducer of neurite outgrowth 3 ... 31 2.0
gi|148727264 transcription elongation regulator 1-like [Homo sap... 31 2.0
gi|188497642 ARHGAP15 [Homo sapiens] 31 2.6
gi|34303932 transmembrane and coiled-coil domains 5A [Homo sapiens] 30 3.4
gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens] 30 4.4
gi|215983098 hypothetical protein LOC63901 [Homo sapiens] 30 4.4
gi|215983096 hypothetical protein LOC63901 [Homo sapiens] 30 4.4
gi|215983094 hypothetical protein LOC63901 [Homo sapiens] 30 4.4
gi|38505211 hypothetical protein LOC63901 [Homo sapiens] 30 4.4
gi|38505209 hypothetical protein LOC63901 [Homo sapiens] 30 4.4
gi|52485941 integrin, alpha 9 precursor [Homo sapiens] 30 5.7
gi|13559514 phosphatidylinositol 4-kinase type 2 alpha [Homo sap... 30 5.7
gi|46048234 nucleolar protein 8 [Homo sapiens] 30 5.7
gi|119120877 zinc finger protein 721 [Homo sapiens] 30 5.7
gi|38570101 TBC1 domain family, member 8B (with GRAM domain) iso... 29 7.5
gi|89001105 zinc finger protein 571 [Homo sapiens] 29 7.5
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 29 7.5
gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens] 29 7.5
>gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens]
Length = 443
Score = 916 bits (2368), Expect = 0.0
Identities = 443/443 (100%), Positives = 443/443 (100%)
Query: 1 MQPSEMVMNPKQVFLSVLIFGVAGLLLFMYLQVWIEEQHTGRVEKRREQKVTSGWGPVKY 60
MQPSEMVMNPKQVFLSVLIFGVAGLLLFMYLQVWIEEQHTGRVEKRREQKVTSGWGPVKY
Sbjct: 1 MQPSEMVMNPKQVFLSVLIFGVAGLLLFMYLQVWIEEQHTGRVEKRREQKVTSGWGPVKY 60
Query: 61 LRPVPRIMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQA 120
LRPVPRIMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQA
Sbjct: 61 LRPVPRIMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQA 120
Query: 121 LSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRS 180
LSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRS
Sbjct: 121 LSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRS 180
Query: 181 FLQEFCKKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASS 240
FLQEFCKKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASS
Sbjct: 181 FLQEFCKKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASS 240
Query: 241 AYNISHNAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSY 300
AYNISHNAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSY
Sbjct: 241 AYNISHNAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSY 300
Query: 301 YHPVFGKAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPC 360
YHPVFGKAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPC
Sbjct: 301 YHPVFGKAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPC 360
Query: 361 LINYDFVGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRT 420
LINYDFVGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRT
Sbjct: 361 LINYDFVGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRT 420
Query: 421 ERQLIYDFYYLDYLMFNYTTPFL 443
ERQLIYDFYYLDYLMFNYTTPFL
Sbjct: 421 ERQLIYDFYYLDYLMFNYTTPFL 443
>gi|189217888 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
Length = 424
Score = 390 bits (1003), Expect = e-108
Identities = 213/436 (48%), Positives = 276/436 (63%), Gaps = 34/436 (7%)
Query: 13 VFLSVLIFGVAGLLLFMYLQVWIE---EQHTG---RVEKRREQKVTSGWGPVKYLRPVPR 66
+F S+L+FG AGLLLF+ LQ E +Q G + R+ G P
Sbjct: 13 MFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEP- 71
Query: 67 IMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTG 126
TE++ +++ P+ + + L +R TRL + +
Sbjct: 72 ---TERVTRDLSSGAPRGRNLPAPDQPQPPL----QRGTRLRLRQRRRR----------- 113
Query: 127 SPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRSFLQEFC 186
LI+K A T+ S+ + I P +L D +W +Q++R+ +QE C
Sbjct: 114 ----LLIKKMPAAATIPANSSDAPF---IRPGPGTL--DGRWVSLHRSQQERKRVMQEAC 164
Query: 187 KKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSAYNISH 246
KY S ++ VSRI+VED+H++LYCEVPKAGCSNWKR+LMVL GLASS +I H
Sbjct: 165 AKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQH 224
Query: 247 NAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSYYHPVFG 306
N VHYG LK+LD+FD +GI RL+TYTK +FVR+P ERLVSAFRDKFEHPNSYYHPVFG
Sbjct: 225 NTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFG 284
Query: 307 KAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDF 366
KAI+ +YR NA EAL GSGV+F EF+ YLLD HRPVGMDIHW+ VS+LC PCLI+YDF
Sbjct: 285 KAILARYRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDF 344
Query: 367 VGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIY 426
VGKFE++E+DAN+FL +I AP+ L FP FKDRHS + RT A++ QY L+ +RQ Y
Sbjct: 345 VGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTY 404
Query: 427 DFYYLDYLMFNYTTPF 442
DFYY+DYLMFNY+ PF
Sbjct: 405 DFYYMDYLMFNYSKPF 420
>gi|189217886 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
Length = 424
Score = 390 bits (1003), Expect = e-108
Identities = 213/436 (48%), Positives = 276/436 (63%), Gaps = 34/436 (7%)
Query: 13 VFLSVLIFGVAGLLLFMYLQVWIE---EQHTG---RVEKRREQKVTSGWGPVKYLRPVPR 66
+F S+L+FG AGLLLF+ LQ E +Q G + R+ G P
Sbjct: 13 MFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEP- 71
Query: 67 IMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTG 126
TE++ +++ P+ + + L +R TRL + +
Sbjct: 72 ---TERVTRDLSSGAPRGRNLPAPDQPQPPL----QRGTRLRLRQRRRR----------- 113
Query: 127 SPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRSFLQEFC 186
LI+K A T+ S+ + I P +L D +W +Q++R+ +QE C
Sbjct: 114 ----LLIKKMPAAATIPANSSDAPF---IRPGPGTL--DGRWVSLHRSQQERKRVMQEAC 164
Query: 187 KKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSAYNISH 246
KY S ++ VSRI+VED+H++LYCEVPKAGCSNWKR+LMVL GLASS +I H
Sbjct: 165 AKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQH 224
Query: 247 NAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSYYHPVFG 306
N VHYG LK+LD+FD +GI RL+TYTK +FVR+P ERLVSAFRDKFEHPNSYYHPVFG
Sbjct: 225 NTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFG 284
Query: 307 KAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDF 366
KAI+ +YR NA EAL GSGV+F EF+ YLLD HRPVGMDIHW+ VS+LC PCLI+YDF
Sbjct: 285 KAILARYRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDF 344
Query: 367 VGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIY 426
VGKFE++E+DAN+FL +I AP+ L FP FKDRHS + RT A++ QY L+ +RQ Y
Sbjct: 345 VGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTY 404
Query: 427 DFYYLDYLMFNYTTPF 442
DFYY+DYLMFNY+ PF
Sbjct: 405 DFYYMDYLMFNYSKPF 420
>gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
Length = 424
Score = 390 bits (1003), Expect = e-108
Identities = 213/436 (48%), Positives = 276/436 (63%), Gaps = 34/436 (7%)
Query: 13 VFLSVLIFGVAGLLLFMYLQVWIE---EQHTG---RVEKRREQKVTSGWGPVKYLRPVPR 66
+F S+L+FG AGLLLF+ LQ E +Q G + R+ G P
Sbjct: 13 MFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEP- 71
Query: 67 IMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTG 126
TE++ +++ P+ + + L +R TRL + +
Sbjct: 72 ---TERVTRDLSSGAPRGRNLPAPDQPQPPL----QRGTRLRLRQRRRR----------- 113
Query: 127 SPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRSFLQEFC 186
LI+K A T+ S+ + I P +L D +W +Q++R+ +QE C
Sbjct: 114 ----LLIKKMPAAATIPANSSDAPF---IRPGPGTL--DGRWVSLHRSQQERKRVMQEAC 164
Query: 187 KKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSAYNISH 246
KY S ++ VSRI+VED+H++LYCEVPKAGCSNWKR+LMVL GLASS +I H
Sbjct: 165 AKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQH 224
Query: 247 NAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSYYHPVFG 306
N VHYG LK+LD+FD +GI RL+TYTK +FVR+P ERLVSAFRDKFEHPNSYYHPVFG
Sbjct: 225 NTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFG 284
Query: 307 KAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDF 366
KAI+ +YR NA EAL GSGV+F EF+ YLLD HRPVGMDIHW+ VS+LC PCLI+YDF
Sbjct: 285 KAILARYRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDF 344
Query: 367 VGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIY 426
VGKFE++E+DAN+FL +I AP+ L FP FKDRHS + RT A++ QY L+ +RQ Y
Sbjct: 345 VGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTY 404
Query: 427 DFYYLDYLMFNYTTPF 442
DFYY+DYLMFNY+ PF
Sbjct: 405 DFYYMDYLMFNYSKPF 420
>gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]
Length = 352
Score = 212 bits (540), Expect = 5e-55
Identities = 110/277 (39%), Positives = 164/277 (59%), Gaps = 10/277 (3%)
Query: 171 TEETQEKRRSFLQEFCKKYGGVSHHQSHLF-HTVSRIYVEDKHKILYCEVPKAGCSNWKR 229
T + RR + + C+ S + L + + + V++ H+++YC VPK C+NWKR
Sbjct: 74 TAVLHQMRRDQVTDTCRANSATSRKRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKR 133
Query: 230 ILMVLNGLA--SSAYNISHNAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLV 287
++MVL G S I N H +LK L+ + + I RL +Y K +FVR+P ERLV
Sbjct: 134 LMMVLTGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLV 193
Query: 288 SAFRDKFEHP-NSYYHPVFGKAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSH--RPV 344
SA+R+KF N +H +G IIK+ R NA +EAL G VKF+EF+ YL+D H R
Sbjct: 194 SAYRNKFTQKYNISFHKRYGTKIIKRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREE 253
Query: 345 GMDIHWEKVSKLCYPCLINYDFVGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDER 404
+ HW+ V LC+PC I+YD VGK+ETLEED+NY LQ+ G LKFP + + R
Sbjct: 254 PFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTY----AKSTR 309
Query: 405 TNAQVVRQYLKDLTRTERQLIYDFYYLDYLMFNYTTP 441
T ++ ++ ++++ + +Y+ Y LD+LMFNY+ P
Sbjct: 310 TTDEMTTEFFQNISSEHQTQLYEVYKLDFLMFNYSVP 346
>gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]
Length = 341
Score = 170 bits (430), Expect = 3e-42
Identities = 103/291 (35%), Positives = 150/291 (51%), Gaps = 12/291 (4%)
Query: 157 PLNKSLVKDNKWKKT-EETQEKRRSFLQEFCKKYGGVSHHQSHLF-HTVSRIYVEDKHKI 214
PL K D + T + +RR L C ++ S Q L + + V+D H +
Sbjct: 51 PLQKLYDLDQDPRSTLAKVHRQRRDLLNSACSRH---SRRQRLLQPEDLRHVLVDDAHGL 107
Query: 215 LYCEVPKAGCSNWKRILMVLNGLA-SSAYNISHNAVHYGKHLKKLDSFDLKGIYTRLNTY 273
LYC VPK C+NWKR+L+ L+G A IS H L L F I RL Y
Sbjct: 108 LYCYVPKVACTNWKRVLLALSGQARGDPRAISAQEAHAPGRLPSLADFSPAEINRRLRAY 167
Query: 274 TKAVFVRDPMERLVSAFRDKFEHPNSY-YHPVFGKAIIKKYRPNACEEALINGSGVKFKE 332
+FVR+P ERL SA+R+K P S + +G I+++ RP A +A G V+F E
Sbjct: 168 LAFLFVREPFERLASAYRNKLARPYSAAFQRRYGARIVQRLRPRALPDARARGHDVRFAE 227
Query: 333 FIHYLLD--SHRPVGMDIHWEKVSKLCYPCLINYDFVGKFETLEEDANYFLQMIGAPKEL 390
F+ YLLD + R + HWE+ LC+PC + YD VGKFETL EDA + L + GA +L
Sbjct: 228 FLAYLLDPRTRREEPFNEHWERAHALCHPCRLRYDVVGKFETLAEDAAFVLGLAGA-SDL 286
Query: 391 KFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIYDFYYLDYLMFNYTTP 441
FP + + + +D++ ++ ++D Y +D+L+FNY+ P
Sbjct: 287 SFPG--PPRPRGAAASRDLAARLFRDISPFYQRRLFDLYKMDFLLFNYSAP 335
>gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]
Length = 414
Score = 164 bits (416), Expect = 1e-40
Identities = 98/293 (33%), Positives = 147/293 (50%), Gaps = 31/293 (10%)
Query: 175 QEKRRSFLQEFCKKYGGVSHHQSHLFHTV-----SRIYVEDKHKILYCEVPKAGCSNWKR 229
Q +RRS L+ FC + F + S + V+D+H +YC VPK C+NWKR
Sbjct: 121 QAERRSVLRGFCANSSLAFPTKERAFDDIPNSELSHLIVDDRHGAIYCYVPKVACTNWKR 180
Query: 230 ILMVLNG------------LASSAYNISHNAVH--YGKHLKKLDSFDLKGIYTRLNTYTK 275
+++VL+G L ++ + + H + K ++ + +L YTK
Sbjct: 181 VMIVLSGSLLHRGAPYRDPLRIPREHVHNASAHLTFNKFWRRYGKLSRHLMKVKLKKYTK 240
Query: 276 AVFVRDPMERLVSAFRDKFEHPNSYYHPVFGKAIIKKYR-----PNACEEALINGSGVKF 330
+FVRDP RL+SAFR KFE N ++ F +++ Y P + EA G V F
Sbjct: 241 FLFVRDPFVRLISAFRSKFELENEEFYRKFAVPMLRLYANHTSLPASAREAFRAGLKVSF 300
Query: 331 KEFIHYLLDSH--RPVGMDIHWEKVSKLCYPCLINYDFVGKFETLEEDANYFLQMIGAPK 388
FI YLLD H + + HW +V +LC+PC I+YDFVGK ETL+EDA LQ++ +
Sbjct: 301 ANFIQYLLDPHTEKLAPFNEHWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLQVDR 360
Query: 389 ELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIYDFYYLDYLMFNYTTP 441
+L+FP S RT + + + RQ +Y Y D+++F Y P
Sbjct: 361 QLRFP-----PSYRNRTASSWEEDWFAKIPLAWRQQLYKLYEADFVLFGYPKP 408
>gi|4758540 HNK-1 sulfotransferase [Homo sapiens]
Length = 356
Score = 157 bits (396), Expect = 2e-38
Identities = 95/250 (38%), Positives = 133/250 (53%), Gaps = 19/250 (7%)
Query: 203 VSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSAYNISHNAVHYGKH--LKKLDS 260
+ RI+V DKHKIL+C+ PK G + WK++L+VLNG SS I N VH + L +L S
Sbjct: 110 LDRIFVCDKHKILFCQTPKVGNTQWKKVLIVLNGAFSSIEEIPENVVHDHEKNGLPRLSS 169
Query: 261 FDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHP---NSYYHPVFGKAIIKKYRPNA 317
F I RL TY K VRDP ERL+SAF+DKF H +Y II+KYR N
Sbjct: 170 FSDAEIQKRLKTYFKFFIVRDPFERLISAFKDKFVHNPRFEPWYRHEIAPGIIRKYRRNR 229
Query: 318 CEEALINGSGVKFKEFIHYLLD-SHRPVGMD-----IHWEKVSKLCYPCLINYDFVGKFE 371
E G++F++F+ YL D +HR + + IHW +LC PC I Y +G E
Sbjct: 230 TET-----RGIQFEDFVRYLGDPNHRWLDLQFGDHIIHWVTYVELCAPCEIMYSVIGHHE 284
Query: 372 TLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIYDFYYL 431
TLE+DA Y L+ G + +P + RT V Y +++ + + +Y +
Sbjct: 285 TLEDDAPYILKEAGIDHLVSYPTIPPGITVYNRTK---VEHYFLGISKRDIRRLYARFEG 341
Query: 432 DYLMFNYTTP 441
D+ +F Y P
Sbjct: 342 DFKLFGYQKP 351
>gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens]
Length = 376
Score = 144 bits (364), Expect = 1e-34
Identities = 88/239 (36%), Positives = 125/239 (52%), Gaps = 15/239 (6%)
Query: 206 IYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSA---YNISHNAVHYGKHLKKLDSFD 262
I V D+++ LYC VPK CSNWKR++ VL G+ S + H + L L
Sbjct: 141 ILVSDRYRFLYCYVPKVACSNWKRVMKVLAGVLDSVDVRLKMDHRS-----DLVFLADLR 195
Query: 263 LKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSYYHPVFGKAIIKKYRPNACEEAL 322
+ I RL Y K +FVR+P+ERL+SA+R+KF Y +G I+++YR A
Sbjct: 196 PEEIRYRLQHYFKFLFVREPLERLLSAYRNKFGEIREYQQR-YGAEIVRRYRAGAGPSPA 254
Query: 323 INGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDFVGKFETLEEDANYFLQ 382
G V F EF+ YL+D P M+ HW V LC PC ++YDFVG +E LE DAN L+
Sbjct: 255 --GDDVTFPEFLRYLVDED-PERMNEHWMPVYHLCQPCAVHYDFVGSYERLEADANQVLE 311
Query: 383 MIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIYDFYYLDYLMFNYTTP 441
+ AP ++FP R + + + + +L R Q + Y LD+ +F Y P
Sbjct: 312 WVRAPPHVRFP---ARQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSLFAYPLP 367
>gi|157671949 rearranged L-myc fusion [Homo sapiens]
Length = 1914
Score = 35.8 bits (81), Expect = 0.080
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 74 QEHITNQNPKFHMPEDV-REKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTGSPTEKL 132
Q H+ NQ K H+PED+ + N +++E + L + S S DQ S+ S E+L
Sbjct: 854 QPHLLNQTDKSHLPEDLFCAESANSQIDTETAEN-LKENSDSNSSDQLSHSSSASMNEEL 912
Query: 133 IEKRQGAKTV 142
I+ ++T+
Sbjct: 913 IDTLDHSETM 922
>gi|4557563 excision repair cross-complementing rodent repair
deficiency, complementation group 3 [Homo sapiens]
Length = 782
Score = 31.6 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 94 KENLLLNSE-RSTRLLTKTSHSQGGDQALSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWP 152
+E L NSE +T L+T+T S+ ++S+G P+ + QG + P
Sbjct: 195 RECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQGKSDI---------P 245
Query: 153 VDIHPLNKSLVKDNKWKKTEETQ----EKRRSFLQEFCKK 188
+D+ + + KD ++ EETQ E ++ ++E K+
Sbjct: 246 MDLFDFYEQMDKDE--EEEEETQTVSFEVKQEMIEELQKR 283
>gi|16753231 tektin 1 [Homo sapiens]
Length = 418
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 59 KYLRPVPRIMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGD 118
K L+P P+ + +E HI N+N ++H + R + E L+ S+R + KT+ D
Sbjct: 3 KLLQPPPKFLPSEW---HIANKN-QYHRADAQRSRSERLVAESQRLVDEIEKTTRKSQSD 58
>gi|112821690 G protein-regulated inducer of neurite outgrowth 3
[Homo sapiens]
Length = 776
Score = 31.2 bits (69), Expect = 2.0
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 87 PEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTGSP----TEKLIEKRQGAKTV 142
P+ V+EK+ S+ T LL S GG ++ + T SP E +E+ + KT
Sbjct: 543 PQVVKEKESTGTDTSDAKTLLLNPKSQESGGTESAANPTPSPIRKNQESTLEENRQTKTA 602
Query: 143 FNKFSNMNWPVDIHPLNKSLVKDNKW--KKTEETQEKRRSFLQEFCKK 188
++++ P D P+ S K ++ + +R S + EF K+
Sbjct: 603 ----TSLSLPSD--PMGDSSPGSGKKTPSRSVKASPRRPSRVSEFLKE 644
>gi|148727264 transcription elongation regulator 1-like [Homo
sapiens]
Length = 586
Score = 31.2 bits (69), Expect = 2.0
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 74 QEHITNQNPKFHMPEDVREKKENLLLNSERSTRLL--TKTSHSQGGDQALSKSTGSPTEK 131
++ I Q K + E+ +EKK LLL E +LL +K S + K +
Sbjct: 493 RKQIFEQFVKTRIKEEYKEKKSKLLLAKEEFKKLLEESKVSPRTTFKEFAEKYGRDQRFR 552
Query: 132 LIEKRQGAKTVFNKF 146
L++KR+ + FN+F
Sbjct: 553 LVQKRKDQEHFFNQF 567
>gi|188497642 ARHGAP15 [Homo sapiens]
Length = 475
Score = 30.8 bits (68), Expect = 2.6
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 16/153 (10%)
Query: 121 LSKSTGSPT--EKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKR 178
+ KST S T E L RQG V + N N D +KS++ + K TE R
Sbjct: 1 MQKSTNSDTSVETLNSTRQGTGAVQMRIKNANSHHDRLSQSKSMILTDVGKVTEPISRHR 60
Query: 179 RSFLQEFCKKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAG---CSNWKRILMVLN 235
R+ Q K + + ++ VE + + ++ G NW +VL+
Sbjct: 61 RNHSQHILK----------DVIPPLEQLMVEKEGYLQKAKIADGGKKLRKNWSTSWIVLS 110
Query: 236 GLASSAYNIS-HNAVHYGKHLKKLDSFDLKGIY 267
Y S A+ K K +S DL G +
Sbjct: 111 SRRIEFYKESKQQALSNMKTGHKPESVDLCGAH 143
>gi|34303932 transmembrane and coiled-coil domains 5A [Homo sapiens]
Length = 288
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 160 KSLVKDNKWKKTEETQEKRRSFLQEFCKKYGGVSHHQSHLFHTVSRI---YVEDKHKILY 216
+ LV+D +W+K T +R LQE ++ + L H+++ + KI
Sbjct: 56 RGLVEDEEWEKENRTTMERERALQELEEETARLERKNKTLVHSITELQQKLTRKSQKITN 115
Query: 217 CE 218
CE
Sbjct: 116 CE 117
>gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens]
Length = 840
Score = 30.0 bits (66), Expect = 4.4
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 95 ENLLLNSERSTRLLTKTSHSQGG-DQALSKSTGS-PTEKLIEKRQGAKTVFNKFS--NMN 150
E+ L NS T SQ D +K GS P + I Q +K+ N+ + N +
Sbjct: 517 ESKLENSPVENVTAASTLLSQAKIDTGENKFPGSAPQQHSILSNQTSKSSDNRETPRNHS 576
Query: 151 WPVDIHPLNKSLVKDNKWKKTEETQEKRRSFLQEFCKKYGGVSHHQSHLFHTVSRIYVED 210
P L ++ KD K K+ E+T EK + + K++G VS + + +T S E
Sbjct: 577 LPKCNSHLEITIPKDLKLKEAEKTDEK-QLIIDAGQKRFGAVSCNVCGMLYTASNPEDET 635
Query: 211 KHKILY 216
+H + +
Sbjct: 636 QHLLFH 641
>gi|215983098 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 30.0 bits (66), Expect = 4.4
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 65 PRIMSTEKIQE-HITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSK 123
PR + + Q H +NP+ R L +N R+ + K +HS+ ++
Sbjct: 49 PRATTNTQAQRFHSPKKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMAL 108
Query: 124 STGSPTEKLIEKRQGAKTV------FNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQE 176
+T K IE QG + + ++ N+ P+ P +V K+++ ++
Sbjct: 109 NTLQAVRKEIETHQGQEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKED 167
>gi|215983096 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 30.0 bits (66), Expect = 4.4
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 65 PRIMSTEKIQE-HITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSK 123
PR + + Q H +NP+ R L +N R+ + K +HS+ ++
Sbjct: 49 PRATTNTQAQRFHSPKKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMAL 108
Query: 124 STGSPTEKLIEKRQGAKTV------FNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQE 176
+T K IE QG + + ++ N+ P+ P +V K+++ ++
Sbjct: 109 NTLQAVRKEIETHQGQEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKED 167
>gi|215983094 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 30.0 bits (66), Expect = 4.4
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 65 PRIMSTEKIQE-HITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSK 123
PR + + Q H +NP+ R L +N R+ + K +HS+ ++
Sbjct: 49 PRATTNTQAQRFHSPKKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMAL 108
Query: 124 STGSPTEKLIEKRQGAKTV------FNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQE 176
+T K IE QG + + ++ N+ P+ P +V K+++ ++
Sbjct: 109 NTLQAVRKEIETHQGQEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKED 167
>gi|38505211 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 30.0 bits (66), Expect = 4.4
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 65 PRIMSTEKIQE-HITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSK 123
PR + + Q H +NP+ R L +N R+ + K +HS+ ++
Sbjct: 49 PRATTNTQAQRFHSPKKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMAL 108
Query: 124 STGSPTEKLIEKRQGAKTV------FNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQE 176
+T K IE QG + + ++ N+ P+ P +V K+++ ++
Sbjct: 109 NTLQAVRKEIETHQGQEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKED 167
>gi|38505209 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 30.0 bits (66), Expect = 4.4
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 65 PRIMSTEKIQE-HITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSK 123
PR + + Q H +NP+ R L +N R+ + K +HS+ ++
Sbjct: 49 PRATTNTQAQRFHSPKKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMAL 108
Query: 124 STGSPTEKLIEKRQGAKTV------FNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQE 176
+T K IE QG + + ++ N+ P+ P +V K+++ ++
Sbjct: 109 NTLQAVRKEIETHQGQEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKED 167
>gi|52485941 integrin, alpha 9 precursor [Homo sapiens]
Length = 1035
Score = 29.6 bits (65), Expect = 5.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 192 VSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGC 224
+ Q ++FHT+ + + K+L CE P C
Sbjct: 866 IPQEQENIFHTIFAFFTKSGRKVLDCEKPGISC 898
>gi|13559514 phosphatidylinositol 4-kinase type 2 alpha [Homo
sapiens]
Length = 479
Score = 29.6 bits (65), Expect = 5.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 278 FVRDPMERLVSAFRDKFEHPNSYYHPVFGKAIIK 311
FV+DP R+++ F+ K E P + +P + K + K
Sbjct: 139 FVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQK 172
>gi|46048234 nucleolar protein 8 [Homo sapiens]
Length = 1167
Score = 29.6 bits (65), Expect = 5.7
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 88 EDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTGSPTEKLIEKRQGAKTVFNKFS 147
+D RE K + L+ S+ + K H++ ++ L+ K ++K K V N +
Sbjct: 729 KDTREIKTDFSLSISNSSDVSAKDKHAEDNEKRLAALEARQKAKEVQK----KLVHNALA 784
Query: 148 NMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRS 180
N++ + P + D++ +TEET + +S
Sbjct: 785 NLDGHPEDKPTHIIFGSDSEC-ETEETSTQEQS 816
>gi|119120877 zinc finger protein 721 [Homo sapiens]
Length = 923
Score = 29.6 bits (65), Expect = 5.7
Identities = 48/225 (21%), Positives = 77/225 (34%), Gaps = 42/225 (18%)
Query: 99 LNSERSTRLLTKTSHSQGGDQALSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPL 158
LN + K + +A ++ST K I R+ A T ++ W +++
Sbjct: 152 LNQHKKIHTGEKPYKCEECGKAFNRSTNLTAHKRIHNREKAYTGEDRDRAFGWSTNLNEY 211
Query: 159 NKSLVKDNKWKKTEETQEKRRSFLQEFCKKYGGVSHHQSHLFHTVSRIYVEDKHKILYCE 218
K D +K CK+ G H SHL +KH+ ++
Sbjct: 212 KKIHTGDKPYK----------------CKECGKAFMHSSHL----------NKHEKIHTG 245
Query: 219 VPKAGCSNWKRILMVLNGLASSAYNISHNAVHYG-KHLKKLDSFDLKGIYTRLNTYTKAV 277
C ++ ++SS+ H +H G K K L+ I T L + +
Sbjct: 246 EKPYKCKECGKV------ISSSSSFAKHKRIHTGEKPFKCLECGKAFNISTTLTKHRRIH 299
Query: 278 FVRDP--MERLVSAFRDKFEHPNSYYHPVFGKAIIKKYRPNACEE 320
P E AFR + N Y H + I +P C E
Sbjct: 300 TGEKPYTCEVCGKAFR---QSANLYVH----RRIHTGEKPYTCGE 337
>gi|38570101 TBC1 domain family, member 8B (with GRAM domain)
isoform a [Homo sapiens]
Length = 1120
Score = 29.3 bits (64), Expect = 7.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 130 EKLIEKRQGAKTV------FNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRSFLQ 183
+KL+ + A+ V F+ +N + P+ + S V D +KT T+ ++
Sbjct: 691 DKLLTCKDDAEAVTALNRFFDNVTNKDSPLPSNVQQGSNVSD---EKTSHTRVDITDLIR 747
Query: 184 EFCKKYGGVSHHQSHLFHTVSRIYV 208
E +KYG + + H +R+YV
Sbjct: 748 ESNEKYGNIRYEDIHSMRCRNRLYV 772
>gi|89001105 zinc finger protein 571 [Homo sapiens]
Length = 609
Score = 29.3 bits (64), Expect = 7.5
Identities = 44/222 (19%), Positives = 84/222 (37%), Gaps = 26/222 (11%)
Query: 120 ALSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRR 179
+L + T+KL +++ + ++ NM ++ H L + + K E QE +
Sbjct: 44 SLDLESSCVTKKLSPEKEIYEMESLQWENMGKRINHHLQYNGLGDNMECKGNLEGQEASQ 103
Query: 180 SFL----QEFCKKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLN 235
L + C++ SH S FH + + K K+ C+ + G S ++
Sbjct: 104 EGLYMCVKITCEEKATESHSTSSTFHRI----IPTKEKLYKCKECRQGFSYLSCLIQ--- 156
Query: 236 GLASSAYNISHNAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPME--RLVSAFRDK 293
+ +HN + K ++F K Y + + ME + D
Sbjct: 157 ------HEENHNIEKCSEVKKHRNTFSKKPSYIQHQRIQTGEKPYECMECGKAFGRTSDL 210
Query: 294 FEHPNSYYHPVFGKAIIKKYRPNACEEALINGSGVKFKEFIH 335
+H + + K Y+ NAC +A I GS + + +H
Sbjct: 211 IQHQKIHTNE-------KPYQCNACGKAFIRGSQLTEHQRVH 245
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 29.3 bits (64), Expect = 7.5
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 398 RHSSDERTNAQVVRQYLKDLTRTERQLIYDFYYLDYLMFNYTTP 441
RH SDE A VVRQ L R +L Y Y+ D L + P
Sbjct: 381 RHLSDEEVLAFVVRQQHVKLARPRLKLPYADYWYDILQSCWRPP 424
>gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens]
Length = 894
Score = 29.3 bits (64), Expect = 7.5
Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 45 KRREQKVTS-----GWGPVKYLRPVPRIMSTEKIQEHITNQNPKFHMPEDVREKKENLLL 99
K E+++TS G G K+ P ST++ Q H+PED REK ++ +L
Sbjct: 410 KNSEERLTSWSRSDGRGDKKHSNQKPSETSTDEHQ----------HVPEDPREKSQDEVL 459
Query: 100 NSE--RSTRLLTKTSHSQGGDQALSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWPVDIHP 157
+ + L S G + S S EK + GAK + K M
Sbjct: 460 RDDPPKKEHLRDTKSTFAGSPERESIHILSVDEK---NKLGAKII--KAEMMGNMELAEQ 514
Query: 158 LNKSLVKDNKWKKT 171
L L K NK+K+T
Sbjct: 515 LKVQLEKANKFKET 528
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,018,636
Number of Sequences: 37866
Number of extensions: 767892
Number of successful extensions: 2097
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2059
Number of HSP's gapped (non-prelim): 44
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.