Search of human proteins with 239741007

Search of human proteins with 239741007

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741007 PREDICTED: hypothetical protein XP_002342063 [Homo
sapiens]
         (139 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239741007 PREDICTED: hypothetical protein XP_002342063 [Homo ...   283   3e-77
gi|239752663 PREDICTED: similar to HSPC088 [Homo sapiens]             251   1e-67
gi|112734870 hypothetical protein LOC57648 [Homo sapiens]              32   0.17 
gi|71274152 hypothetical protein LOC388939 [Homo sapiens]              32   0.22 
gi|118402590 myosin XV [Homo sapiens]                                  31   0.28 
gi|7705266 NCK interacting protein with SH3 domain isoform 1 [Ho...    31   0.37 
gi|37577148 NCK interacting protein with SH3 domain isoform 2 [H...    31   0.37 
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s...    30   0.48 
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ...    30   0.48 
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ...    30   0.48 
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s...    30   0.48 
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]               30   0.63 
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]            30   0.83 
gi|73623035 sperm associated antigen 5 [Homo sapiens]                  29   1.1  
gi|29893555 angiopoietin-like 6 [Homo sapiens]                         29   1.1  
gi|151301154 mucin 6, gastric [Homo sapiens]                           29   1.1  
gi|18959210 WIRE protein [Homo sapiens]                                29   1.1  
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             29   1.1  
gi|12751477 forkhead box L2 [Homo sapiens]                             29   1.4  
gi|73747885 ADAM metallopeptidase domain 12 isoform 1 preproprot...    29   1.4  
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]             28   1.8  
gi|50658061 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...    28   1.8  
gi|24111244 MAM domain containing glycosylphosphatidylinositol a...    28   1.8  
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi...    28   1.8  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         28   1.8  
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]          28   1.8  
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]      28   1.8  
gi|12707562 period 2 [Homo sapiens]                                    28   2.4  
gi|153792495 growth differentiation factor 15 [Homo sapiens]           28   2.4  
gi|116284392 mucin 2 precursor [Homo sapiens]                          28   2.4  

>gi|239741007 PREDICTED: hypothetical protein XP_002342063 [Homo
           sapiens]
          Length = 139

 Score =  283 bits (724), Expect = 3e-77
 Identities = 139/139 (100%), Positives = 139/139 (100%)

Query: 1   MAAAVAGSGRRETTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSS 60
           MAAAVAGSGRRETTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSS
Sbjct: 1   MAAAVAGSGRRETTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSS 60

Query: 61  LGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAP 120
           LGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAP
Sbjct: 61  LGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAP 120

Query: 121 AHTSRSTSLFYESPSTFNV 139
           AHTSRSTSLFYESPSTFNV
Sbjct: 121 AHTSRSTSLFYESPSTFNV 139


>gi|239752663 PREDICTED: similar to HSPC088 [Homo sapiens]
          Length = 190

 Score =  251 bits (642), Expect = 1e-67
 Identities = 126/138 (91%), Positives = 128/138 (92%), Gaps = 1/138 (0%)

Query: 2   AAAVAGSGRRETTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSSL 61
           AA  A +      AP+V TRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSSL
Sbjct: 54  AANAAPAPGHPAPAPSV-TRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSSL 112

Query: 62  GTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAPA 121
           GTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAPA
Sbjct: 113 GTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAPA 172

Query: 122 HTSRSTSLFYESPSTFNV 139
           HTSRSTSLFYESPSTFNV
Sbjct: 173 HTSRSTSLFYESPSTFNV 190


>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
          Length = 1094

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)

Query: 36  LWERCETPRLPEIALRALPRPGV----SSLGTILCVPSVPVGPIVLTSATPESSRFTRPA 91
           L +R   P  P++     P P      +     L  P+V  GP+  T A+P+S    +  
Sbjct: 654 LGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTT 713

Query: 92  PSTVPEAHRHSRILRLAPVPCRCYRPPAPAHTSRSTSLFYESPS 135
            + + E+   S+     P P   Y PP P   ++   +  E+PS
Sbjct: 714 LTPLQESPVISKDQSPPPSPPPSYHPPPP--PTKKPEVVVEAPS 755


>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
          Length = 1288

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 20/136 (14%)

Query: 8    SGRRETTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALP---RPGVSSLGTI 64
            SG+  T+  ++   R++ ++     R+    R       +   R+LP   RP   S   +
Sbjct: 967  SGQNRTSESSLARPRQSRERSPPVGRKASPTRTHWVPQADKRRRSLPSSYRPAQPSPSAV 1026

Query: 65   LCVPSVPVGPIVLTSATPESSRFTRP-----APSTVPEAHRHSRILRLAPVPCRCYRPPA 119
               PS PV P VL  + P + R T P      P+  PE+         AP  C+   PP 
Sbjct: 1027 QTPPSPPVSPRVL--SPPTTKRRTSPPHQPKLPNPPPES---------APAQCKVPSPPT 1075

Query: 120  PAHTSRSTSLFYESPS 135
              H   S      SPS
Sbjct: 1076 -QHPEASPPFSIPSPS 1090


>gi|118402590 myosin XV [Homo sapiens]
          Length = 3530

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 37/118 (31%), Positives = 46/118 (38%), Gaps = 13/118 (11%)

Query: 10  RRETTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSSLGTILCVPS 69
           R  T+    + +  +E++ + R R     R   P + E A +   R G    G     P 
Sbjct: 567 RPATSLARFLKKTLSEKKPIARLRGSQKARAGGPAVREAAYK---RFGYKLAGMD---PE 620

Query: 70  VPVGPIVLTSATPE--SSRFTR--PAPSTVPEAHRHSRILRLAPVPCR---CYRPPAP 120
            P  PIVL  A P   SS   R  PAP   P    H   L   PVP R      PPAP
Sbjct: 621 KPGTPIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPSSGPPPAP 678


>gi|7705266 NCK interacting protein with SH3 domain isoform 1 [Homo
           sapiens]
          Length = 722

 Score = 30.8 bits (68), Expect = 0.37
 Identities = 17/71 (23%), Positives = 30/71 (42%)

Query: 57  GVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYR 116
           G +S+ +   V S  +  +  +S+  E      P P  VP    H+ + ++ P P +   
Sbjct: 208 GGNSVSSGSSVSSTSLDTLYTSSSPSEPGSSCSPTPPPVPRRGTHTTVSQVQPPPSKASA 267

Query: 117 PPAPAHTSRST 127
           P  PA    +T
Sbjct: 268 PEPPAEEEVAT 278


>gi|37577148 NCK interacting protein with SH3 domain isoform 2 [Homo
           sapiens]
          Length = 715

 Score = 30.8 bits (68), Expect = 0.37
 Identities = 17/71 (23%), Positives = 30/71 (42%)

Query: 57  GVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYR 116
           G +S+ +   V S  +  +  +S+  E      P P  VP    H+ + ++ P P +   
Sbjct: 201 GGNSVSSGSSVSSTSLDTLYTSSSPSEPGSSCSPTPPPVPRRGTHTTVSQVQPPPSKASA 260

Query: 117 PPAPAHTSRST 127
           P  PA    +T
Sbjct: 261 PEPPAEEEVAT 271


>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 37  WERCETPRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVL-TSATPESSRFTR---PAP 92
           W R   P  P +     P P  +   T +   S P GP+   T   P+S+  T    P P
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631

Query: 93  STVPEAHRHSRILRLAPVPCRCYRPPAPAHTSRSTSL 129
           +  P            P+P      PAP   + STSL
Sbjct: 632 ACPPPGPAPHPTGPPGPIPV-----PAPPQIATSTSL 663


>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 37  WERCETPRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVL-TSATPESSRFTR---PAP 92
           W R   P  P +     P P  +   T +   S P GP+   T   P+S+  T    P P
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631

Query: 93  STVPEAHRHSRILRLAPVPCRCYRPPAPAHTSRSTSL 129
           +  P            P+P      PAP   + STSL
Sbjct: 632 ACPPPGPAPHPTGPPGPIPV-----PAPPQIATSTSL 663


>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 37  WERCETPRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVL-TSATPESSRFTR---PAP 92
           W R   P  P +     P P  +   T +   S P GP+   T   P+S+  T    P P
Sbjct: 572 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 631

Query: 93  STVPEAHRHSRILRLAPVPCRCYRPPAPAHTSRSTSL 129
           +  P            P+P      PAP   + STSL
Sbjct: 632 ACPPPGPAPHPTGPPGPIPV-----PAPPQIATSTSL 663


>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 37  WERCETPRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVL-TSATPESSRFTR---PAP 92
           W R   P  P +     P P  +   T +   S P GP+   T   P+S+  T    P P
Sbjct: 433 WTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQP 492

Query: 93  STVPEAHRHSRILRLAPVPCRCYRPPAPAHTSRSTSL 129
           +  P            P+P      PAP   + STSL
Sbjct: 493 ACPPPGPAPHPTGPPGPIPV-----PAPPQIATSTSL 524


>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
          Length = 525

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 62  GTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAP 120
           G   C P V VGP    S  P ++    PAP     A   +     AP P     PPAP
Sbjct: 8   GRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGP----TPPAP 62


>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 370

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 13/89 (14%)

Query: 33  RRRLWERCETPRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAP 92
           R RL  R  + RLP   L   P  G+   G     P +   P +L+    +S        
Sbjct: 157 RTRLRLRLASARLPR-GLPPAPAAGLWRAGCTRLRPLLLQPPPMLSPGLAQS-------- 207

Query: 93  STVPEAHRHSRILRL-APVPCRCYRPPAP 120
              P    H+R L L AP P  C  PPAP
Sbjct: 208 ---PGVELHARTLSLPAPSPAPCLPPPAP 233


>gi|73623035 sperm associated antigen 5 [Homo sapiens]
          Length = 1193

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 11  RETTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSSLGTIL----- 65
           RE   P        E Q ++     +   C TP L E+  +  P P V  +G IL     
Sbjct: 278 REMRFPTHPKESETEDQALVSSVEDILSTCLTPNLVEMESQEAPGPAVEDVGRILGSDTE 337

Query: 66  --CVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAPAHT 123
               P   +   V TS   E+ R +   PS + +A   +       V    + P AP   
Sbjct: 338 SWMSPLAWLEKGVNTSVMLENLRQSLSLPSMLRDAAIGTTPFSTCSVG-TWFTPSAPQEK 396

Query: 124 SRSTS 128
           S +TS
Sbjct: 397 STNTS 401


>gi|29893555 angiopoietin-like 6 [Homo sapiens]
          Length = 470

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 68  PSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVP 111
           P VPV P+ L  +T ++SR   PAP    +  +  +    +P+P
Sbjct: 200 PLVPVVPVRLVGSTSDTSRMLDPAPEPQRDQTQRQQEPMASPMP 243


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 22/81 (27%), Positives = 33/81 (40%)

Query: 48   IALRALPRPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRL 107
            I L +   P  SS  T       P+ P  LTS+ P +S    P P+T       S +   
Sbjct: 1230 IGLLSSTGPSPSSNHTPASPTQTPLLPATLTSSKPTASSGEPPRPTTAVTPQATSGLPPT 1289

Query: 108  APVPCRCYRPPAPAHTSRSTS 128
            A +     +P     T+R+T+
Sbjct: 1290 ATLRSTATKPTVTQATTRATA 1310


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 16/68 (23%)

Query: 68  PSVPVGPIVLTSATPESSRFTRPAPSTVPEA-HRHSRILRLAPVPCRCYRPPAPAHTSRS 126
           P VP GP             + P   + PE   RH+ + R  P P R   PP P  TS S
Sbjct: 259 PGVPNGP-------------SSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPP--TSAS 303

Query: 127 TSLFYESP 134
            SL    P
Sbjct: 304 PSLLSNRP 311


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 17/83 (20%)

Query: 54   PRPGVSS-LGTILCVPSVPVG-PIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVP 111
            P P  SS    ++  P++P   P       P S+    PAP+ V            AP P
Sbjct: 1876 PAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPVS-----------APNP 1924

Query: 112  CRCYRPPAPAHTSRSTSLFYESP 134
                 PPAPA T   T    ++P
Sbjct: 1925 A----PPAPAQTQAQTHKPVQNP 1943


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 59  SSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPP 118
           +S G    V S+ + P V+ S          P P   P  H H+  L  A  P     PP
Sbjct: 253 ASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAHHLHAAAAP-----PP 307

Query: 119 APAH 122
           AP H
Sbjct: 308 APPH 311


>gi|73747885 ADAM metallopeptidase domain 12 isoform 1 preproprotein
           [Homo sapiens]
          Length = 909

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 1/82 (1%)

Query: 43  PRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHS 102
           PR P +  R LP           C P+ P  P+        ++R T     T  +     
Sbjct: 826 PRAPSVPARPLPAKPALRQAQGTCKPNPPQKPLP-ADPLARTTRLTHALARTPGQWETGL 884

Query: 103 RILRLAPVPCRCYRPPAPAHTS 124
           R+  L P P   ++ P   HT+
Sbjct: 885 RLAPLRPAPQYPHQVPRSTHTA 906


>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
          Length = 236

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 8   SGRRETTAPAVVTRRRAEQQDVIRCRRRL 36
           SG    +AP  V R+R+   +++RC+RRL
Sbjct: 75  SGGGHKSAPKQVKRQRSSSPELMRCKRRL 103


>gi|50658061 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
           [Homo sapiens]
          Length = 1168

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 79  SATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAPAHTSRSTS----LFYESP 134
           S+  ES     PAP +  +A R  R   L+  P  C  PP PA  S   S    + Y S 
Sbjct: 570 SSDSESHLPEEPAPLSPQQAFRR-RANTLSHFPIECQEPPQPARGSPGVSQRKLMRYHSV 628

Query: 135 ST 136
           ST
Sbjct: 629 ST 630


>gi|24111244 MAM domain containing glycosylphosphatidylinositol
           anchor 1 [Homo sapiens]
          Length = 955

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 6/94 (6%)

Query: 31  RCRRRLWERCETPRLPEIALRA-LPRPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTR 89
           R  +RL      P LP +     L     S  GT LC+ S P  P+   S     S  T 
Sbjct: 379 RMSKRLLVTRNDPELPAVTSSLELIDLHFSDYGTYLCMASFPGAPVPDLSVEVNISSETV 438

Query: 90  PAPSTVPEAHRHSRILRLAPVPCRCY-----RPP 118
           P   +VP+      +   +P   +C      RPP
Sbjct: 439 PPTISVPKGRAVVTVREGSPAELQCEVRGKPRPP 472


>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
           sapiens]
          Length = 946

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 39  RCETPRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAP 92
           RC +P   EI  R  P PG  S       PS+ +    LT AT  ++R T   P
Sbjct: 266 RCGSPTAMEIDKRGSPTPGTRS----CLAPSLGLFGASLTMATEVAARVTSTGP 315


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 12/90 (13%)

Query: 43   PRLPEIALRALPRPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEAHRHS 102
            P  PE++ +  P P    L   L V + P GP ++ ++ P       P P  +P    +S
Sbjct: 1027 PPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRP-------PGPVLLPPLQPNS 1079

Query: 103  RIL-RLAPVPCRCY----RPPAPAHTSRST 127
              L ++ P P        RPP P  + + T
Sbjct: 1080 GSLPQVLPSPLGVLSGTSRPPTPTLSLKPT 1109


>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
          Length = 379

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 30/108 (27%), Positives = 36/108 (33%), Gaps = 16/108 (14%)

Query: 13  TTAPAVVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRALPRPGVSSLGTILCVPSVPV 72
           T  P V      E  DV  C RR  E       P   +R+   PG             P 
Sbjct: 94  TGRPGVPNTAAGEDADVAACPRRGEEEEGGGGFPHFGVRSCAPPG-----------RCPA 142

Query: 73  GPIVLTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAP 120
            P    S T  +S   RPAP   P+     R    +P      RPP+P
Sbjct: 143 PPHPRESTTSFASAPPRPAPGLEPQ-----RGPAASPPQEPSSRPPSP 185


>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
          Length = 1349

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 46   PEIALRALPRPGVSSLGTILCVPSVPVGPIVLT-SATPESSRFTRPAPSTVPEAHRHSRI 104
            PE+A RA PRPG+     +  +   P   +  +  +TP +   ++ + S  P        
Sbjct: 1216 PELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPAMGF 1275

Query: 105  LRLAPVPCRCYRPPAPAHTSRSTSLFYESPS 135
              LA         PAPA    S  +F ++PS
Sbjct: 1276 TTLATGYPSPPPGPAPAGPGDSLDVFGQTPS 1306


>gi|12707562 period 2 [Homo sapiens]
          Length = 1255

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 79  SATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAPAHTS 124
           S T +SS    P P+ VP A+     L + P P     PPAP H S
Sbjct: 834 SDTSQSSCPAVPFPAPVPAAYS----LPVFPAPGTVAAPPAPPHAS 875


>gi|153792495 growth differentiation factor 15 [Homo sapiens]
          Length = 308

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 21/126 (16%)

Query: 18  VVTRRRAEQQDVIRCRRRLWERCETPRLPEIALRAL-PRPGVSSLGTILCVPSVPVGPIV 76
           ++TR RA Q          WE   T  +P  A+R L P   + S G +     + +    
Sbjct: 63  LLTRLRANQS---------WEDSNTDLVPAPAVRILTPEVRLGSGGHL----HLRISRAA 109

Query: 77  LTSATPESSRFTRPAPSTVPEAHRHSRILRLAPVPCRCYRPPAPA-------HTSRSTSL 129
           L    PE+SR  R      P A R   + R         RP APA         S+S  L
Sbjct: 110 LPEGLPEASRLHRALFRLSPTASRSWDVTRPLRRQLSLARPQAPALHLRLSPPPSQSDQL 169

Query: 130 FYESPS 135
             ES S
Sbjct: 170 LAESSS 175


>gi|116284392 mucin 2 precursor [Homo sapiens]
          Length = 5179

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 7/98 (7%)

Query: 42   TPRLPEIALRALP---RPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEA 98
            TP  P  +   LP    P      T    P+    P   T+ +P  +  T P P+T P  
Sbjct: 1624 TPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPS- 1682

Query: 99   HRHSRILRLAPVPCRCYRPPAPAHTSRSTSLFYESPST 136
               S I      P      P+P  T  S      +PS+
Sbjct: 1683 ---SPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSS 1717



 Score = 26.6 bits (57), Expect = 7.0
 Identities = 24/98 (24%), Positives = 32/98 (32%), Gaps = 6/98 (6%)

Query: 42   TPRLPEIALRALP---RPGVSSLGTILCVPSVPVGPIVLTSATPESSRFTRPAPSTVPEA 98
            TP  P  +   LP    P      T    P+    P   T+ +P +   T P P+T P  
Sbjct: 1545 TPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSP 1604

Query: 99   HRHSRILRLAPVPCRCYRPPAPAHTSRSTSLFYESPST 136
                      P P     PP     +  TS     P+T
Sbjct: 1605 ---PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTT 1639


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.132    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,722,433
Number of Sequences: 37866
Number of extensions: 370272
Number of successful extensions: 1392
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 1315
Number of HSP's gapped (non-prelim): 155
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.