Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239740950
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740950 PREDICTED: similar to mitogen-activated protein
kinase 8 interacting protein 1 [Homo sapiens]
(442 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740950 PREDICTED: similar to mitogen-activated protein kin... 909 0.0
gi|169211037 PREDICTED: similar to mitogen-activated protein kin... 837 0.0
gi|4885433 mitogen-activated protein kinase 8 interacting protei... 643 0.0
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 352 5e-97
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 352 5e-97
gi|7705318 GULP, engulfment adaptor PTB domain containing 1 [Hom... 61 2e-09
gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein i... 43 5e-04
gi|50511947 cajalin 2 isoform b [Homo sapiens] 42 9e-04
gi|50511945 cajalin 2 isoform a [Homo sapiens] 42 9e-04
gi|10047134 cajalin 2 isoform c [Homo sapiens] 42 9e-04
gi|140161500 ankyrin repeat and sterile alpha motif domain conta... 42 0.001
gi|194473700 Src homology 3 domain-containing guanine nucleotide... 40 0.004
gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens] 39 0.007
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] 39 0.009
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens] 38 0.021
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 37 0.027
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 37 0.036
gi|54144629 numb homolog isoform 4 [Homo sapiens] 37 0.047
gi|20070356 numb homolog isoform 3 [Homo sapiens] 37 0.047
gi|50083291 amyloid beta A4 precursor protein-binding, family B,... 36 0.061
gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo ... 36 0.061
gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo s... 36 0.061
gi|18093112 ABT1-associated protein [Homo sapiens] 36 0.061
gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo ... 35 0.10
gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo ... 35 0.10
gi|54144627 numb homolog isoform 2 [Homo sapiens] 35 0.14
gi|54144625 numb homolog isoform 1 [Homo sapiens] 35 0.14
gi|49640014 ubiquitin associated and SH3 domain containing, A sh... 35 0.14
gi|9507221 ubiquitin associated and SH3 domain containing, A lon... 35 0.14
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.14
>gi|239740950 PREDICTED: similar to mitogen-activated protein kinase
8 interacting protein 1 [Homo sapiens]
Length = 442
Score = 909 bits (2348), Expect = 0.0
Identities = 442/442 (100%), Positives = 442/442 (100%)
Query: 1 MLQMDLIDATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP 60
MLQMDLIDATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP
Sbjct: 1 MLQMDLIDATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP 60
Query: 61 GSGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKKYKQPRPHHRSRHLHQQPTLLVDEHA 120
GSGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKKYKQPRPHHRSRHLHQQPTLLVDEHA
Sbjct: 61 GSGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKKYKQPRPHHRSRHLHQQPTLLVDEHA 120
Query: 121 QLELVSLRPCFGDYSDESDSAIVYDNCVSVSSPYESAIGEEYEEASRPQPPACLSKDSTP 180
QLELVSLRPCFGDYSDESDSAIVYDNCVSVSSPYESAIGEEYEEASRPQPPACLSKDSTP
Sbjct: 121 QLELVSLRPCFGDYSDESDSAIVYDNCVSVSSPYESAIGEEYEEASRPQPPACLSKDSTP 180
Query: 181 DEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHRTIFRFVPRHEDEPEL 240
DEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHRTIFRFVPRHEDEPEL
Sbjct: 181 DEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHRTIFRFVPRHEDEPEL 240
Query: 241 EVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHMAALAKNSDWVDQFRV 300
EVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHMAALAKNSDWVDQFRV
Sbjct: 241 EVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHMAALAKNSDWVDQFRV 300
Query: 301 KFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQE 360
KFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQE
Sbjct: 301 KFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQE 360
Query: 361 AKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAESVGR 420
AKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAESVGR
Sbjct: 361 AKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAESVGR 420
Query: 421 AFQQFHKQFVEYTCPTEDIYLE 442
AFQQFHKQFVEYTCPTEDIYLE
Sbjct: 421 AFQQFHKQFVEYTCPTEDIYLE 442
>gi|169211037 PREDICTED: similar to mitogen-activated protein kinase
8 interacting protein 1 [Homo sapiens]
Length = 423
Score = 837 bits (2162), Expect = 0.0
Identities = 418/442 (94%), Positives = 420/442 (95%), Gaps = 19/442 (4%)
Query: 1 MLQMDLIDATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP 60
MLQMDLIDATGDTPGAE EDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP
Sbjct: 1 MLQMDLIDATGDTPGAE---EDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP 57
Query: 61 GSGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKKYKQPRPHHRSRHLHQQPTLLVDEHA 120
GSGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKK SRHLHQQPTLL
Sbjct: 58 GSGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKK---------SRHLHQQPTLL----- 103
Query: 121 QLELVSLRPCFGDYSDESDSAIVYDNCVSVSSPYESAIGEEYEEASRPQPPACLSKDSTP 180
ELVSLRPCF DYSDESDSAIVYDNC SVSSPYESAIGEEYEEASRPQPPACLSKDSTP
Sbjct: 104 --ELVSLRPCFRDYSDESDSAIVYDNCASVSSPYESAIGEEYEEASRPQPPACLSKDSTP 161
Query: 181 DEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHRTIFRFVPRHEDEPEL 240
DEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHRTIFRFVPRHEDEPEL
Sbjct: 162 DEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHRTIFRFVPRHEDEPEL 221
Query: 241 EVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHMAALAKNSDWVDQFRV 300
EVDDPLLVELQAEDYWYEAYNMRTGARG FTAYYAIEVTKEPEHMAALAKNSDWVDQFRV
Sbjct: 222 EVDDPLLVELQAEDYWYEAYNMRTGARGIFTAYYAIEVTKEPEHMAALAKNSDWVDQFRV 281
Query: 301 KFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQE 360
KFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIG+KADDSQE
Sbjct: 282 KFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGIKADDSQE 341
Query: 361 AKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAESVGR 420
AKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAESVGR
Sbjct: 342 AKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAESVGR 401
Query: 421 AFQQFHKQFVEYTCPTEDIYLE 442
AFQQFHKQFVEYTCPTE+IYLE
Sbjct: 402 AFQQFHKQFVEYTCPTENIYLE 423
>gi|4885433 mitogen-activated protein kinase 8 interacting protein 1
[Homo sapiens]
Length = 711
Score = 643 bits (1658), Expect = 0.0
Identities = 333/422 (78%), Positives = 345/422 (81%), Gaps = 25/422 (5%)
Query: 24 DEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGPGSG---DTYRPKRPTTLNLFPQV 80
D + AA AG P +E S +++ PG G P P P+
Sbjct: 312 DPDPAAYPSTAGRPHPSISEEEEGFDCLSSPERAEPPGGGWRGSLGEPPPP------PRA 365
Query: 81 QLSQDTLNNNSLGKKYKQPRPHHRSRHLHQQPTLLVDEHAQLELVSLRPCFGDYSDESDS 140
LS DT + KY TL+VDEHAQLELVSLRPCFGDYSDESDS
Sbjct: 366 SLSSDTSALSYDSVKY----------------TLVVDEHAQLELVSLRPCFGDYSDESDS 409
Query: 141 AIVYDNCVSVSSPYESAIGEEYEEASRPQPPACLSKDSTPDEPDVHFSKKFLNIFMSGRS 200
A VYDNC SVSSPYESAIGEEYEEA RPQPPACLS+DSTPDEPDVHFSKKFLN+FMSGRS
Sbjct: 410 ATVYDNCASVSSPYESAIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRS 469
Query: 201 RSSSAESFGLFSCIINREEQEQTHRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAY 260
RSSSAESFGLFSCIIN EEQEQTHR IFRFVPRHEDE ELEVDDPLLVELQAEDYWYEAY
Sbjct: 470 RSSSAESFGLFSCIINGEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAY 529
Query: 261 NMRTGARGFFTAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGDVVLSAA 320
NMRTGARG F AYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKG+ VL AA
Sbjct: 530 NMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAA 589
Query: 321 MQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFRGY 380
MQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISF GY
Sbjct: 590 MQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGY 649
Query: 381 HPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAESVGRAFQQFHKQFVEYTCPTEDIY 440
HPKNNKYFGFITKH ADHRFACHVFVSEDSTKALAESVGRAFQQF+KQFVEYTCPTEDIY
Sbjct: 650 HPKNNKYFGFITKHPADHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIY 709
Query: 441 LE 442
LE
Sbjct: 710 LE 711
Score = 192 bits (489), Expect = 4e-49
Identities = 93/96 (96%), Positives = 94/96 (97%)
Query: 1 MLQMDLIDATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP 60
MLQMDLIDATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP
Sbjct: 91 MLQMDLIDATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGP 150
Query: 61 GSGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKKY 96
GSGDTYRPKRPTTLNLFPQV SQDTLNNNSLGKK+
Sbjct: 151 GSGDTYRPKRPTTLNLFPQVPRSQDTLNNNSLGKKH 186
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 352 bits (902), Expect = 5e-97
Identities = 179/337 (53%), Positives = 233/337 (69%), Gaps = 31/337 (9%)
Query: 113 TLLVDEHAQLELVSLRPCFG-DYSDESDSAIVYDNCVSVSSPYESAIGEEYEEASRPQPP 171
TL+VDEH QLELVSLR C G + E DS EAS +
Sbjct: 512 TLVVDEHTQLELVSLRRCAGLGHDSEEDSG---------------------GEASEEEAG 550
Query: 172 ACL------SKDSTPDEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHR 225
A L S D++PD PD+ FSKKFLN+F++ SRSSS ESFGLFSC++N EE+EQTHR
Sbjct: 551 AALLGGGQVSGDTSPDSPDLTFSKKFLNVFVNSTSRSSSTESFGLFSCLVNGEEREQTHR 610
Query: 226 TIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHM 285
+FRF+PRH DE EL+VDDP+LVE + +D+W+ +NMRTG RG F A+YA V + +
Sbjct: 611 AVFRFIPRHPDELELDVDDPVLVEAEEDDFWFRGFNMRTGERGVFPAFYAHAVPGPAKDL 670
Query: 286 AALAKNSDWVDQFRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEIS 345
++ WV++F V+FLGSV+VP H+G+ +L AAMQKIAT R+LTVH PP+SC LEIS
Sbjct: 671 LGSKRSPCWVERFDVQFLGSVEVPCHQGNGILCAAMQKIATARKLTVHLRPPASCDLEIS 730
Query: 346 VRGVKIGVKADDSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVF 405
+RGVK+ + + +CSHFFQ+KNISF G HP+N+ YFGFITKH RFACHVF
Sbjct: 731 LRGVKLSLSGGGPE---FQRCSHFFQMKNISFCGCHPRNSCYFGFITKHPLLSRFACHVF 787
Query: 406 VSEDSTKALAESVGRAFQQFHKQFVEYTCPTEDIYLE 442
VS++S + +A+SVGRAF +++++ + Y CPTEDIYLE
Sbjct: 788 VSQESMRPVAQSVGRAFLEYYQEHLAYACPTEDIYLE 824
Score = 34.7 bits (78), Expect = 0.18
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 17 EDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGPGSGDTYRPKRPTTLNL 76
+++EEDD++E G + + G +P S + + G S + RPTTL L
Sbjct: 86 DNEEEDDEDEEEEEEEEEGDGEGQEGGDPGS--EAPAPGPLIPSPSVEEPHKHRPTTLRL 143
Query: 77 FPQVQLSQDTLNNN 90
+QD+LNNN
Sbjct: 144 --TTLGAQDSLNNN 155
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 352 bits (902), Expect = 5e-97
Identities = 179/337 (53%), Positives = 233/337 (69%), Gaps = 31/337 (9%)
Query: 113 TLLVDEHAQLELVSLRPCFG-DYSDESDSAIVYDNCVSVSSPYESAIGEEYEEASRPQPP 171
TL+VDEH QLELVSLR C G + E DS EAS +
Sbjct: 485 TLVVDEHTQLELVSLRRCAGLGHDSEEDSG---------------------GEASEEEAG 523
Query: 172 ACL------SKDSTPDEPDVHFSKKFLNIFMSGRSRSSSAESFGLFSCIINREEQEQTHR 225
A L S D++PD PD+ FSKKFLN+F++ SRSSS ESFGLFSC++N EE+EQTHR
Sbjct: 524 AALLGGGQVSGDTSPDSPDLTFSKKFLNVFVNSTSRSSSTESFGLFSCLVNGEEREQTHR 583
Query: 226 TIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHM 285
+FRF+PRH DE EL+VDDP+LVE + +D+W+ +NMRTG RG F A+YA V + +
Sbjct: 584 AVFRFIPRHPDELELDVDDPVLVEAEEDDFWFRGFNMRTGERGVFPAFYAHAVPGPAKDL 643
Query: 286 AALAKNSDWVDQFRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEIS 345
++ WV++F V+FLGSV+VP H+G+ +L AAMQKIAT R+LTVH PP+SC LEIS
Sbjct: 644 LGSKRSPCWVERFDVQFLGSVEVPCHQGNGILCAAMQKIATARKLTVHLRPPASCDLEIS 703
Query: 346 VRGVKIGVKADDSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVF 405
+RGVK+ + + +CSHFFQ+KNISF G HP+N+ YFGFITKH RFACHVF
Sbjct: 704 LRGVKLSLSGGGPE---FQRCSHFFQMKNISFCGCHPRNSCYFGFITKHPLLSRFACHVF 760
Query: 406 VSEDSTKALAESVGRAFQQFHKQFVEYTCPTEDIYLE 442
VS++S + +A+SVGRAF +++++ + Y CPTEDIYLE
Sbjct: 761 VSQESMRPVAQSVGRAFLEYYQEHLAYACPTEDIYLE 797
Score = 34.7 bits (78), Expect = 0.18
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 17 EDDEEDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGPGSGDTYRPKRPTTLNL 76
+++EEDD++E G + + G +P S + + G S + RPTTL L
Sbjct: 59 DNEEEDDEDEEEEEEEEEGDGEGQEGGDPGS--EAPAPGPLIPSPSVEEPHKHRPTTLRL 116
Query: 77 FPQVQLSQDTLNNN 90
+QD+LNNN
Sbjct: 117 --TTLGAQDSLNNN 128
>gi|7705318 GULP, engulfment adaptor PTB domain containing 1 [Homo
sapiens]
Length = 304
Score = 60.8 bits (146), Expect = 2e-09
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCV-LEISVRGVKIGVKAD 356
+ KFLGS +V KG V+ A++K+ R + V L+IS+ GVKI
Sbjct: 27 YNAKFLGSTEVEQPKGTEVVRDAVRKLKFARHIKKSEGQKIPKVELQISIYGVKI----- 81
Query: 357 DSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKALAE 416
E K + H QL ISF + + F FI K ++ C+VF SE + +
Sbjct: 82 --LEPKTKEVQHNCQLHRISFCADDKTDKRIFTFICKDSESNKHLCYVFDSEKCAEEITL 139
Query: 417 SVGRAFQQFHKQFVE 431
++G+AF +++F+E
Sbjct: 140 TIGQAFDLAYRKFLE 154
>gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein
isoform 1 [Homo sapiens]
Length = 506
Score = 43.1 bits (100), Expect = 5e-04
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPS----SCVLEISVRGVKIGV 353
F K++GS+ VP V + AAM RR+ F + + +SV GVK+ +
Sbjct: 32 FEAKYVGSLDVPRPNSRVEIVAAM------RRIRYEFKAKNIKKKKVSIMVSVDGVKVIL 85
Query: 354 KADDSQEAKGNKCSHFFQLK---------NISFRGYHPKNNKYFGFITKHLADHRFACHV 404
K K + + K I + + ++ K F +I + A + F C+V
Sbjct: 86 KKKKKLLLLQKKEWTWDESKMLVMQDPIYRIFYVSHDSQDLKIFSYIARDGASNIFRCNV 145
Query: 405 FVSEDSTKA--LAESVGRAFQQFHKQFVEYTCPTED 438
F S+ ++A + +VG+AF+ HK +++T D
Sbjct: 146 FKSKKKSQAMRIVRTVGQAFEVCHKLSLQHTQQNAD 181
>gi|50511947 cajalin 2 isoform b [Homo sapiens]
Length = 510
Score = 42.4 bits (98), Expect = 9e-04
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKI-ATTRRLTVHFNPPSSCVLEISVRGVKIGVKAD 356
++ +LGS+ + +G A K+ A ++ T + +L +S +GVK
Sbjct: 312 YKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKF----- 366
Query: 357 DSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKA--L 414
+A +++NIS P++ F +ITK L + CHVF + D A +
Sbjct: 367 --IDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEI 424
Query: 415 AESVGRAFQ 423
++G+AF+
Sbjct: 425 ILTLGQAFE 433
>gi|50511945 cajalin 2 isoform a [Homo sapiens]
Length = 1248
Score = 42.4 bits (98), Expect = 9e-04
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKI-ATTRRLTVHFNPPSSCVLEISVRGVKIGVKAD 356
++ +LGS+ + +G A K+ A ++ T + +L +S +GVK
Sbjct: 1062 YKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKF----- 1116
Query: 357 DSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKA--L 414
+A +++NIS P++ F +ITK L + CHVF + D A +
Sbjct: 1117 --IDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEI 1174
Query: 415 AESVGRAFQ 423
++G+AF+
Sbjct: 1175 ILTLGQAFE 1183
>gi|10047134 cajalin 2 isoform c [Homo sapiens]
Length = 414
Score = 42.4 bits (98), Expect = 9e-04
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKI-ATTRRLTVHFNPPSSCVLEISVRGVKIGVKAD 356
++ +LGS+ + +G A K+ A ++ T + +L +S +GVK
Sbjct: 228 YKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKF----- 282
Query: 357 DSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDSTKA--L 414
+A +++NIS P++ F +ITK L + CHVF + D A +
Sbjct: 283 --IDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEI 340
Query: 415 AESVGRAFQ 423
++G+AF+
Sbjct: 341 ILTLGQAFE 349
>gi|140161500 ankyrin repeat and sterile alpha motif domain containing
1 [Homo sapiens]
Length = 1134
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADD 357
+ +LGS+ + +G A K+ R+ T H + +L I+ +GVK
Sbjct: 942 YEANYLGSMLIKDLRGTESTQDACAKM---RKSTEHMKKIPTIILSITYKGVKF------ 992
Query: 358 SQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVF--VSEDSTKALA 415
+A +++NIS P++ F +ITK L CHVF V + T +
Sbjct: 993 -IDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEII 1051
Query: 416 ESVGRAFQ 423
++G+AF+
Sbjct: 1052 LTLGQAFE 1059
>gi|194473700 Src homology 3 domain-containing guanine nucleotide
exchange factor [Homo sapiens]
Length = 871
Score = 40.0 bits (92), Expect = 0.004
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 230 FVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVT 279
F + DE L+V D +L+ + D WYE +R G RG+F A E+T
Sbjct: 800 FTAKQPDELSLQVADVVLIYQRVSDGWYEGERLRDGERGWFPMECAKEIT 849
>gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]
Length = 888
Score = 39.3 bits (90), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 227 IFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTK 280
I+ + PR EDE EL + LV + +D W++ +M T G F Y VT+
Sbjct: 453 IYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTR 506
Score = 35.4 bits (80), Expect = 0.10
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 222 QTHRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFF 270
+ HR + + P+ E E EL+ D + V + ED W++ R G G F
Sbjct: 832 ERHRVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLF 880
>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
Length = 609
Score = 38.9 bits (89), Expect = 0.009
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADD 357
F V++LG V+V +G V A++K+ R +V VL +S G+++ DD
Sbjct: 80 FPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSV------KSVLWVSADGLRV---VDD 130
Query: 358 SQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVS-EDSTKALAE 416
K ++ +SF +K F +I + R+ CH F++ +DS + L+
Sbjct: 131 ----KTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSH 186
Query: 417 SVGRAF 422
+VG AF
Sbjct: 187 AVGCAF 192
>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
Length = 882
Score = 37.7 bits (86), Expect = 0.021
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 227 IFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHMA 286
++ + P+ DE EL + V + +D W++ ++RTG G F Y V++ P A
Sbjct: 472 LYAYKPQKSDELELHKGEMYRVLEKCQDGWFKGASLRTGVSGVFPGNYVTPVSRVPAGGA 531
Query: 287 ALAKNS 292
+N+
Sbjct: 532 GPPRNN 537
Score = 34.7 bits (78), Expect = 0.18
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 222 QTHRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFF 270
+ +R + + P+ E E EL+ D + V + ED WY+ R G G F
Sbjct: 826 ERYRVVVSYPPQSEAEIELKEGDIVFVHKKREDGWYKGTLQRNGRTGLF 874
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 37.4 bits (85), Expect = 0.027
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 32 PGAGPPKAESGQEPASRGQGQSQGQSQGPGSG 63
P GP +A++ E +GQGQ QGQ QG G G
Sbjct: 166 PDRGPAEAQTQAEGQGQGQGQGQGQGQGQGQG 197
Score = 32.7 bits (73), Expect = 0.68
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 30 RRPGAGPPKAESGQEPASRGQGQSQGQSQGPGSG 63
R P +AE + +GQGQ QGQ QG G G
Sbjct: 168 RGPAEAQTQAEGQGQGQGQGQGQGQGQGQGQGQG 201
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 37.0 bits (84), Expect = 0.036
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 230 FVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEVTKEPEHMAALA 289
+ PR DE LE D ++V Q+ D W E + G RG+F +E PE A
Sbjct: 1521 YKPRENDELALEKADVVMVTQQSSDGWLEGVRLSDGERGWFPV-QQVEFISNPEVRAQNL 1579
Query: 290 KNSDWVDQFRVKFL 303
K + V +++ +
Sbjct: 1580 KEAHRVKTAKLQLV 1593
>gi|54144629 numb homolog isoform 4 [Homo sapiens]
Length = 592
Score = 36.6 bits (83), Expect = 0.047
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADD 357
F VK+LG V+V +G + A++++ T + V VL +S G+++
Sbjct: 39 FPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAV------KAVLWVSADGLRV------ 86
Query: 358 SQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVS-EDSTKALAE 416
+ K ++ +SF ++ F +I + R+ CH F++ +D+ + L+
Sbjct: 87 -VDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSH 145
Query: 417 SVGRAF 422
+VG AF
Sbjct: 146 AVGCAF 151
>gi|20070356 numb homolog isoform 3 [Homo sapiens]
Length = 640
Score = 36.6 bits (83), Expect = 0.047
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADD 357
F VK+LG V+V +G + A++++ T + V VL +S G+++
Sbjct: 39 FPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAV------KAVLWVSADGLRV------ 86
Query: 358 SQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVS-EDSTKALAE 416
+ K ++ +SF ++ F +I + R+ CH F++ +D+ + L+
Sbjct: 87 -VDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSH 145
Query: 417 SVGRAF 422
+VG AF
Sbjct: 146 AVGCAF 151
>gi|50083291 amyloid beta A4 precursor protein-binding, family B,
member 2 [Homo sapiens]
Length = 736
Score = 36.2 bits (82), Expect = 0.061
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 292 SDWVDQFRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKI 351
++ V +F V++LG + V G +L++A++ + T+ N + ++V +
Sbjct: 562 TELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSS------NKEDWLSVNMNVADATV 615
Query: 352 GVKADDSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVSEDST 411
V ++ ++E +C +++ +SF G K+ F FI + RF CHVF E +
Sbjct: 616 TVISEKNEEEVLVEC----RVRFLSFMGVG-KDVHTFAFIMD-TGNQRFECHVFWCEPNA 669
Query: 412 KALAESVGRA 421
++E+V A
Sbjct: 670 GNVSEAVQAA 679
>gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo
sapiens]
Length = 671
Score = 36.2 bits (82), Expect = 0.061
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 224 HRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEV 278
+R ++++ P++EDE EL D + V Q +D W+ + RT G F Y V
Sbjct: 617 YRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPV 671
>gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo
sapiens]
Length = 329
Score = 36.2 bits (82), Expect = 0.061
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 224 HRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIEV 278
+R ++++ P++EDE EL D + V Q +D W+ + RT G F Y V
Sbjct: 275 YRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPV 329
>gi|18093112 ABT1-associated protein [Homo sapiens]
Length = 851
Score = 36.2 bits (82), Expect = 0.061
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 9 ATGDTPGAEDDE-EDDDEERAARRPGAGPPKAESGQEPASRGQGQSQGQSQGPGSGDTYR 67
A+GD G+EDDE ED+DEE K++SG + A +G G+ +T
Sbjct: 265 ASGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSDSGPDLA-----------RGKGNIETSS 313
Query: 68 PKRPTTLNLFPQ 79
T +LFP+
Sbjct: 314 EDEDDTADLFPE 325
>gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo
sapiens]
Length = 628
Score = 35.4 bits (80), Expect = 0.10
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 218 EEQEQTHRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIE 277
E + + + F ++P+++DE EL+V D + V + E+ W+E + G G F + + E
Sbjct: 60 ERRRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWE--GVLNGKTGMFPSNFIKE 117
Query: 278 VTKEPEHM 285
++ E + +
Sbjct: 118 LSGESDEL 125
>gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo
sapiens]
Length = 665
Score = 35.4 bits (80), Expect = 0.10
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 218 EEQEQTHRTIFRFVPRHEDEPELEVDDPLLVELQAEDYWYEAYNMRTGARGFFTAYYAIE 277
E + + + F ++P+++DE EL+V D + V + E+ W+E + G G F + + E
Sbjct: 97 ERRRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWE--GVLNGKTGMFPSNFIKE 154
Query: 278 VTKEPEHM 285
++ E + +
Sbjct: 155 LSGESDEL 162
>gi|54144627 numb homolog isoform 2 [Homo sapiens]
Length = 603
Score = 35.0 bits (79), Expect = 0.14
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHF-----NPPSSCVLEISVRGVKIG 352
F VK+LG V+V +G + A++++ R+ F VL +S G+++
Sbjct: 39 FPVKYLGHVEVDESRGMHICEDAVKRLKAERKFFKGFFGKTGKKAVKAVLWVSADGLRV- 97
Query: 353 VKADDSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVS-EDST 411
+ K ++ +SF ++ F +I + R+ CH F++ +D+
Sbjct: 98 ------VDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTG 151
Query: 412 KALAESVGRAF 422
+ L+ +VG AF
Sbjct: 152 ERLSHAVGCAF 162
>gi|54144625 numb homolog isoform 1 [Homo sapiens]
Length = 651
Score = 35.0 bits (79), Expect = 0.14
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 298 FRVKFLGSVQVPYHKGDVVLSAAMQKIATTRRLTVHF-----NPPSSCVLEISVRGVKIG 352
F VK+LG V+V +G + A++++ R+ F VL +S G+++
Sbjct: 39 FPVKYLGHVEVDESRGMHICEDAVKRLKAERKFFKGFFGKTGKKAVKAVLWVSADGLRV- 97
Query: 353 VKADDSQEAKGNKCSHFFQLKNISFRGYHPKNNKYFGFITKHLADHRFACHVFVS-EDST 411
+ K ++ +SF ++ F +I + R+ CH F++ +D+
Sbjct: 98 ------VDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTG 151
Query: 412 KALAESVGRAF 422
+ L+ +VG AF
Sbjct: 152 ERLSHAVGCAF 162
>gi|49640014 ubiquitin associated and SH3 domain containing, A short
form [Homo sapiens]
Length = 623
Score = 35.0 bits (79), Expect = 0.14
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 222 QTHRTIFRFVPRHEDEPELEVDDPLLVEL----QAEDYWYEAYNMRTGARGFFTAYYAIE 277
QT R +F++ P++ DE L D + V+ +A + W + RTG RGF
Sbjct: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFL------- 293
Query: 278 VTKEPEHMAALAKNSD-WVDQFRVKFLGSVQVPYHK-GDVVLSAAMQKIATTRRLTVHFN 335
PE+ A SD WV F + + K G+ + + + T R
Sbjct: 294 ----PENYTDRASESDTWVKHRMYTFSLATDLNSRKDGEASSRCSGEFLPQTARSLSSLQ 349
Query: 336 PPSSCVLEISVRGVKIGVKAD 356
+ V SV V+ G + D
Sbjct: 350 ALQATVARKSVLVVRHGERVD 370
>gi|9507221 ubiquitin associated and SH3 domain containing, A long
form [Homo sapiens]
Length = 661
Score = 35.0 bits (79), Expect = 0.14
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 222 QTHRTIFRFVPRHEDEPELEVDDPLLVEL----QAEDYWYEAYNMRTGARGFFTAYYAIE 277
QT R +F++ P++ DE L D + V+ +A + W + RTG RGF
Sbjct: 279 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFL------- 331
Query: 278 VTKEPEHMAALAKNSD-WVDQFRVKFLGSVQVPYHK-GDVVLSAAMQKIATTRRLTVHFN 335
PE+ A SD WV F + + K G+ + + + T R
Sbjct: 332 ----PENYTDRASESDTWVKHRMYTFSLATDLNSRKDGEASSRCSGEFLPQTARSLSSLQ 387
Query: 336 PPSSCVLEISVRGVKIGVKAD 356
+ V SV V+ G + D
Sbjct: 388 ALQATVARKSVLVVRHGERVD 408
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.0 bits (79), Expect = 0.14
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 9 ATGDTPGAEDDEEDDDEERAARRPGAGPPKAESGQEP-------ASRGQGQSQGQSQGPG 61
AT +D++ D +E++A RP P ++ +G EP A R G Q + P
Sbjct: 327 ATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPL 386
Query: 62 SGDTYRPKRPTTLNLFPQVQLSQDTLNNNSLGKKY-KQPRPHHRSRHLHQQP 112
S + P + S + L +S + P+P SRH P
Sbjct: 387 SQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSP 438
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,196,364
Number of Sequences: 37866
Number of extensions: 942680
Number of successful extensions: 6889
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 6462
Number of HSP's gapped (non-prelim): 459
length of query: 442
length of database: 18,247,518
effective HSP length: 105
effective length of query: 337
effective length of database: 14,271,588
effective search space: 4809525156
effective search space used: 4809525156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.