Guide to the Human Genome
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Name: UBASH3A Sequence: fasta or formatted (623aa) NCBI GI: 49640014
Description:

ubiquitin associated and SH3 domain containing, A short form

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [661aa] ubiquitin associated and SH3 domain containing, A long form
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         53           2
 C cysteine            3.4         21           1
 D aspartate           5.0         31           2
 E glutamate           6.6         41           2
 F phenylalanine       4.7         29           2
 G glycine             5.3         33           1
 H histidine           2.6         16           2
 I isoleucine          3.7         23           1
 K lysine              5.1         32           2
 L leucine            11.2         70           2
 M methionine          1.6         10           1
 N asparagine          2.7         17           1
 P proline             6.3         39           2
 Q glutamine           4.3         27           2
 R arginine            5.9         37           2
 S serine              8.0         50           2
 T threonine           6.1         38           2
 V valine              4.7         29           2
 W tryptophan          1.8         11           1
 Y tyrosine            2.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin associated and SH3 domain containing, A sh... 
UBASH3A               0.983   ubiquitin associated and SH3 domain containing, A lon...
UBASH3B               0.438   ubiquitin associated and SH3 domain containing, B [H...
LOC100134052          0.177   PREDICTED: similar to Ubiquitin associated and SH3 ...
SORBS3                0.024   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.024   sorbin and SH3 domain containing 3 isoform 2 
UBXN1                 0.019   UBX domain protein 1 
NEBL                  0.018   nebulette sarcomeric isoform 
NEBL                  0.018   nebulette non-muscle isoform 
BIN1                  0.017   bridging integrator 1 isoform 10 
BIN1                  0.017   bridging integrator 1 isoform 9 
BIN1                  0.017   bridging integrator 1 isoform 7 
BIN1                  0.017   bridging integrator 1 isoform 6 
BIN1                  0.017   bridging integrator 1 isoform 5 
BIN1                  0.017   bridging integrator 1 isoform 4 
BIN1                  0.017   bridging integrator 1 isoform 3 
BIN1                  0.017   bridging integrator 1 isoform 2 
BIN1                  0.017   bridging integrator 1 isoform 1 
BIN1                  0.017   bridging integrator 1 isoform 8 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.016   sorbin and SH3 domain containing 2 isoform 1 
SORBS1                0.016   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.016   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.016   sorbin and SH3 domain containing 1 isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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