BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239740845 PREDICTED: hypothetical protein XP_002344070 [Homo sapiens] (222 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239740845 PREDICTED: hypothetical protein XP_002344070 [Homo ... 484 e-137 gi|239740737 PREDICTED: hypothetical protein [Homo sapiens] 309 1e-84 gi|239740652 PREDICTED: hypothetical protein [Homo sapiens] 308 3e-84 gi|30425464 transmembrane protein 105 [Homo sapiens] 35 0.067 gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 33 0.19 gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo... 33 0.19 gi|188536004 zinc finger protein 469 [Homo sapiens] 33 0.25 gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens] 32 0.33 gi|5453810 netrin 3 [Homo sapiens] 32 0.33 gi|154091020 leucine-rich repeats and calponin homology (CH) dom... 31 0.74 gi|134031945 SCO-spondin [Homo sapiens] 30 1.3 gi|194578888 calmegin [Homo sapiens] 30 2.1 gi|4758004 calmegin [Homo sapiens] 30 2.1 gi|239757152 PREDICTED: hypothetical protein [Homo sapiens] 29 2.8 gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo ... 29 2.8 gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 29 2.8 gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 29 2.8 gi|92859641 thymidine kinase 2, mitochondrial [Homo sapiens] 29 2.8 gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens] 29 2.8 gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens] 29 3.7 gi|239757272 PREDICTED: hypothetical protein [Homo sapiens] 29 3.7 gi|239751775 PREDICTED: hypothetical protein [Homo sapiens] 29 3.7 gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 29 3.7 gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo ... 29 3.7 gi|226423905 splA/ryanodine receptor domain and SOCS box contain... 28 4.8 gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 28 4.8 gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 28 4.8 gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 28 4.8 gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens] 28 6.2 gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 28 6.2 >gi|239740845 PREDICTED: hypothetical protein XP_002344070 [Homo sapiens] Length = 222 Score = 484 bits (1245), Expect = e-137 Identities = 222/222 (100%), Positives = 222/222 (100%) Query: 1 MDARTLGWGRLLGTMDSCFVLGAPWSPGQLGAESCLRFSNESIQTAASVTLTCLRYRRPE 60 MDARTLGWGRLLGTMDSCFVLGAPWSPGQLGAESCLRFSNESIQTAASVTLTCLRYRRPE Sbjct: 1 MDARTLGWGRLLGTMDSCFVLGAPWSPGQLGAESCLRFSNESIQTAASVTLTCLRYRRPE 60 Query: 61 TSPGTRNIAFLPKGKHHSLNVVLLLPRDSFLFADTWVEEGQKCTCKKQECGGLTTPGLGP 120 TSPGTRNIAFLPKGKHHSLNVVLLLPRDSFLFADTWVEEGQKCTCKKQECGGLTTPGLGP Sbjct: 61 TSPGTRNIAFLPKGKHHSLNVVLLLPRDSFLFADTWVEEGQKCTCKKQECGGLTTPGLGP 120 Query: 121 FAGRKGGVCPSVGEAWSHKPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTK 180 FAGRKGGVCPSVGEAWSHKPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTK Sbjct: 121 FAGRKGGVCPSVGEAWSHKPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTK 180 Query: 181 PRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGCGFWRGS 222 PRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGCGFWRGS Sbjct: 181 PRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGCGFWRGS 222 >gi|239740737 PREDICTED: hypothetical protein [Homo sapiens] Length = 147 Score = 309 bits (791), Expect = 1e-84 Identities = 137/144 (95%), Positives = 141/144 (97%), Gaps = 1/144 (0%) Query: 80 NVVLLLPR-DSFLFADTWVEEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSH 138 N++++ P DSFLFADTWVEEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSH Sbjct: 4 NLIMVFPHLDSFLFADTWVEEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSH 63 Query: 139 KPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGA 198 KPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGA Sbjct: 64 KPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGA 123 Query: 199 TEGPAFGRDPGKRRPWGCGFWRGS 222 TEGPAFGRDPGKRRPWGCGFWRGS Sbjct: 124 TEGPAFGRDPGKRRPWGCGFWRGS 147 >gi|239740652 PREDICTED: hypothetical protein [Homo sapiens] Length = 196 Score = 308 bits (788), Expect = 3e-84 Identities = 136/138 (98%), Positives = 137/138 (99%) Query: 85 LPRDSFLFADTWVEEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSHKPNHWT 144 L +DSFLFADTWVEEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSHKPNHWT Sbjct: 59 LEKDSFLFADTWVEEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSHKPNHWT 118 Query: 145 ESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAF 204 ESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAF Sbjct: 119 ESPRGEEKKAEPADLEAGFCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAF 178 Query: 205 GRDPGKRRPWGCGFWRGS 222 GRDPGKRRPWGCGFWRGS Sbjct: 179 GRDPGKRRPWGCGFWRGS 196 >gi|30425464 transmembrane protein 105 [Homo sapiens] Length = 129 Score = 34.7 bits (78), Expect = 0.067 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 169 GAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAFG-RDPGKRRPWG 215 GA+R G V+G LL W +T +R P +GP + R PWG Sbjct: 19 GAFRAGNVIGQLIYLLTWSLFTAWLRPPTLLQGPRTSPQGSPPRSPWG 66 >gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo sapiens] Length = 828 Score = 33.1 bits (74), Expect = 0.19 Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 10/58 (17%) Query: 166 SWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEG--PAFGRDPGK--RRPWGCGFW 219 SWG GGGV G L+ WG VRG G+T G GR G+ RR W W Sbjct: 597 SWGSVGAGGGV-GGPTGLVPWG-----VRGAGSTGGTFSGLGRAAGELSRRHWAMKSW 648 >gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo sapiens] Length = 623 Score = 33.1 bits (74), Expect = 0.19 Identities = 19/69 (27%), Positives = 27/69 (39%) Query: 100 GQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSHKPNHWTESPRGEEKKAEPADL 159 G + ++ E G A + CP A S +P W E P E+ EPA + Sbjct: 70 GPRVVERQWEAGSAGAASPEELASPEERACPEEPAAPSPEPRVWLEDPASPEEPGEPAPV 129 Query: 160 EAGFCQSWG 168 GF +G Sbjct: 130 PPGFGAVYG 138 >gi|188536004 zinc finger protein 469 [Homo sapiens] Length = 3925 Score = 32.7 bits (73), Expect = 0.25 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 7/100 (7%) Query: 116 PGLGPFAGRKGGVCPSVGEAWSHKPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYRGGG 175 P G R G+ P+ +A P+ + RG++ K DL++G G+ GG Sbjct: 919 PARGRPKTRSLGLAPTEADA----PSQGRQQRRGKQLKLFRKDLDSGGAAEGSGSGGGGR 974 Query: 176 VLGTKPRLL-GWG-RYTLRVRGPGATEGPAFGRDPGKRRP 213 G +PR G G R R R P T+ P DP R P Sbjct: 975 ASGLRPRRNDGLGERPPPRPRRP-RTQAPGSRADPAPRVP 1013 >gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens] Length = 362 Score = 32.3 bits (72), Expect = 0.33 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Query: 169 GAYRGG-----GVLGTKPRLLGWGRYTLRVRGPGATEGPAFGRDP 208 GAY GG G+LG++ GW R LR R P A GPA P Sbjct: 114 GAYAGGPGLVAGLLGSEDHS-GWVRPALRARAPDAFVGPALAPAP 157 >gi|5453810 netrin 3 [Homo sapiens] Length = 580 Score = 32.3 bits (72), Expect = 0.33 Identities = 17/29 (58%), Positives = 17/29 (58%) Query: 181 PRLLGWGRYTLRVRGPGATEGPAFGRDPG 209 PRLL RY L GPGA G A GR PG Sbjct: 517 PRLLPGRRYLLLGGGPGAAAGGAGGRGPG 545 >gi|154091020 leucine-rich repeats and calponin homology (CH) domain containing 2 [Homo sapiens] Length = 765 Score = 31.2 bits (69), Expect = 0.74 Identities = 21/75 (28%), Positives = 33/75 (44%) Query: 19 FVLGAPWSPGQLGAESCLRFSNESIQTAASVTLTCLRYRRPETSPGTRNIAFLPKGKHHS 78 F G PW+PG L + +R + +++ A S + L R+ PG+ S Sbjct: 60 FPNGPPWNPGSLQPQHTVRSLDRALEEAGSSGILSLSGRKLRDFPGSGYDLTDTTQADLS 119 Query: 79 LNVVLLLPRDSFLFA 93 N +P D +LFA Sbjct: 120 RNRFTEIPSDVWLFA 134 >gi|134031945 SCO-spondin [Homo sapiens] Length = 5147 Score = 30.4 bits (67), Expect = 1.3 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 22/110 (20%) Query: 120 PFAGRKG-------GVCPSVGEAWSHKPNHWTESPRGEEKKAEPADLEAGFCQSWGGAYR 172 P++GR G G+CP + + +P W + R C WGGA+ Sbjct: 58 PWSGRSGLTRSPAPGLCP-IYKPPETRPAKWNRTVRT-------------CCPGWGGAHC 103 Query: 173 GGGVLGTKPRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGCGFWRGS 222 + P + + +++ G+ A + RPWG +W GS Sbjct: 104 TEALAKASPEGHCFAMWQCQLQA-GSANASAGSLEECCARPWGQSWWDGS 152 Score = 29.3 bits (64), Expect = 2.8 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 18 CFVLGAPWSPG---QLGAESCLRFSNESIQTAASVTLTCLRYRRPETSPGT 65 C+ LG P PG Q ESCL S + T LTC + PG+ Sbjct: 4986 CWHLGRPHLPGSEWQEACESCLCLSGRPVCTQHCSPLTCAQGEEMVLEPGS 5036 >gi|194578888 calmegin [Homo sapiens] Length = 610 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Query: 63 PGTRNIAFLPKGKHHSLNVVLLLPRDSFLFAD 94 PG R + + KHH+++ VL P F+FAD Sbjct: 106 PGDRGLVLKSRAKHHAISAVLAKP---FIFAD 134 >gi|4758004 calmegin [Homo sapiens] Length = 610 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Query: 63 PGTRNIAFLPKGKHHSLNVVLLLPRDSFLFAD 94 PG R + + KHH+++ VL P F+FAD Sbjct: 106 PGDRGLVLKSRAKHHAISAVLAKP---FIFAD 134 >gi|239757152 PREDICTED: hypothetical protein [Homo sapiens] Length = 235 Score = 29.3 bits (64), Expect = 2.8 Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 23/76 (30%) Query: 156 PADLEAG-FCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAFGRDPGKRR-- 212 P L+AG +C W G R WGR L + GPG G G P R Sbjct: 121 PVHLKAGKWCVCWPGVVR-------------WGRGCLELAGPGPPCGRLRGLGPSPPRAA 167 Query: 213 ------PWGCGFWRGS 222 GCG W GS Sbjct: 168 RPSVPAAAGCG-WAGS 182 >gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo sapiens] Length = 235 Score = 29.3 bits (64), Expect = 2.8 Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 23/76 (30%) Query: 156 PADLEAG-FCQSWGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAFGRDPGKRR-- 212 P L+AG +C W G R WGR L + GPG G G P R Sbjct: 121 PVHLKAGKWCVCWPGVVR-------------WGRGCLELAGPGPPCGRLRGLGPSPPRAA 167 Query: 213 ------PWGCGFWRGS 222 GCG W GS Sbjct: 168 RPSVPAAAGCG-WAGS 182 >gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] Length = 475 Score = 29.3 bits (64), Expect = 2.8 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Query: 126 GGVCPSVGEAWSHKPNHWTESPRGEEKKAEPADLEAGFCQSW 167 GG P G P+ TESP G EP+ E F SW Sbjct: 289 GGATP--GATLPKSPSQPTESPAGSLPSGEPSAAEGTFAVSW 328 >gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] Length = 506 Score = 29.3 bits (64), Expect = 2.8 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Query: 126 GGVCPSVGEAWSHKPNHWTESPRGEEKKAEPADLEAGFCQSW 167 GG P G P+ TESP G EP+ E F SW Sbjct: 320 GGATP--GATLPKSPSQPTESPAGSLPSGEPSAAEGTFAVSW 359 >gi|92859641 thymidine kinase 2, mitochondrial [Homo sapiens] Length = 307 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 183 LLGWGRYTLRVRGPGATEGPAFGRDPGK--RRPW 214 L GW LR GPG+ PA G P + RR W Sbjct: 48 LRGWAARALRCFGPGSRGSPASGPGPRRVQRRAW 81 >gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens] Length = 955 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%) Query: 96 WVEEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPS 131 W E+G K TC+K C + P R GG CPS Sbjct: 408 WCEDG-KVTCEKVRCEAACSH---PIPSRDGGCCPS 439 >gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens] Length = 338 Score = 28.9 bits (63), Expect = 3.7 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 11 LLGTMDSCFVLGAPWSPGQLGAESCLRFSNESIQTAASVTLTCLRYRRPETSP 63 LLG++ FVL AP P L + SC+ ++ A V+ TC+ Y + P Sbjct: 231 LLGSVPGLFVLQAPVLPSDLLSWSCV----GAVGILALVSFTCVGYAVTKAHP 279 >gi|239757272 PREDICTED: hypothetical protein [Homo sapiens] Length = 314 Score = 28.9 bits (63), Expect = 3.7 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 164 CQSWGGAYRGGGVLGTK-PRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGCG 217 C+ GG + G + G+ PR L R R+RG G G PG R P G G Sbjct: 134 CRGGGGGFSGRRLGGSPWPRWLASSRR--RIRGTGVPAGFCHLDGPGSRVPAGAG 186 >gi|239751775 PREDICTED: hypothetical protein [Homo sapiens] Length = 314 Score = 28.9 bits (63), Expect = 3.7 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 164 CQSWGGAYRGGGVLGTK-PRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGCG 217 C+ GG + G + G+ PR L R R+RG G G PG R P G G Sbjct: 134 CRGGGGGFSGRRLGGSPWPRWLASSRR--RIRGTGVPAGFCHLDGPGSRVPAGAG 186 >gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo sapiens] Length = 800 Score = 28.9 bits (63), Expect = 3.7 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 11/81 (13%) Query: 143 WTES--PRGEEKKAEPADLEAGF-------CQSWGGAYRGGGVLGTKP--RLLGWGRYTL 191 W ES PRG + AE + G G + G G+ P R W +L Sbjct: 337 WVESGTPRGRQSLAEGVKRDGGQGLPDVEGAPDMGSSGEGAGLEEGSPLRRERAWPPPSL 396 Query: 192 RVRGPGATEGPAFGRDPGKRR 212 R PG TEG G +RR Sbjct: 397 RTPTPGLTEGGGTGLPSKQRR 417 >gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo sapiens] Length = 314 Score = 28.9 bits (63), Expect = 3.7 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 164 CQSWGGAYRGGGVLGTK-PRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGCG 217 C+ GG + G + G+ PR L R R+RG G G PG R P G G Sbjct: 134 CRGGGGGFSGRRLGGSPWPRWLASSRR--RIRGTGVPAGFCHLDGPGSRVPAGAG 186 >gi|226423905 splA/ryanodine receptor domain and SOCS box containing 2 isoform 2 [Homo sapiens] Length = 267 Score = 28.5 bits (62), Expect = 4.8 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%) Query: 168 GGAYRGGGVLGTKPRLLG------WGRYTLRVRGPGATEGPAFGR 206 GG Y G G K R L WG+ +R+R G G A+GR Sbjct: 183 GGTYLGPAFRGLKGRTLYPAVSAVWGQCQVRIRYLGERRGEAWGR 227 >gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] Length = 396 Score = 28.5 bits (62), Expect = 4.8 Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 113 LTTPGLGPFAG--RKGGVCPSVGEAWSHKPNHWTESPRGEEKK---AEPADLEAGFCQSW 167 +T P AG R G+ S G AW+ PRG E + PA S Sbjct: 9 VTVPRAAGSAGQRRAPGLPRSSGPAWAESRAR-PPRPRGLEPRHPPGSPALRPTDRTCSS 67 Query: 168 GGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAFGRDP 208 A GGGV G +P + G++ RG G RDP Sbjct: 68 SSAGVGGGVGGAQPGSVPLGQHLALERGRTLGHGRVGRRDP 108 >gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] Length = 396 Score = 28.5 bits (62), Expect = 4.8 Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 113 LTTPGLGPFAG--RKGGVCPSVGEAWSHKPNHWTESPRGEEKK---AEPADLEAGFCQSW 167 +T P AG R G+ S G AW+ PRG E + PA S Sbjct: 9 VTVPRAAGSAGQRRAPGLPRSSGPAWAESRAR-PPRPRGLEPRHPPGSPALRPTDRTCSS 67 Query: 168 GGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAFGRDP 208 A GGGV G +P + G++ RG G RDP Sbjct: 68 SSAGVGGGVGGAQPGSVPLGQHLALERGRTLGHGRVGRRDP 108 >gi|119220598 apolipoprotein B48 receptor [Homo sapiens] Length = 1088 Score = 28.5 bits (62), Expect = 4.8 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 8/42 (19%) Query: 98 EEGQKCTCKKQECGGLTTPGLGPFAGRKGGVCPSVGEAWSHK 139 EEG+ + QE G T GP CPS+GEA++ + Sbjct: 682 EEGEASVSENQELDGSTGADAGP--------CPSLGEAYARE 715 >gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens] Length = 338 Score = 28.1 bits (61), Expect = 6.2 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 11 LLGTMDSCFVLGAPWSPGQLGAESCLRFSNESIQTAASVTLTCLRYRRPETSP 63 LLG++ FVL P P L + SC+ ++ A V+ TC+ Y + P Sbjct: 231 LLGSVPGLFVLQPPVLPSDLPSWSCV----GAVGILALVSFTCVSYAVTKAHP 279 >gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] Length = 430 Score = 28.1 bits (61), Expect = 6.2 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Query: 167 WGGAYRGGGVLGTKPRLLGWGRYTLRVRGPGATEGPAFGRDPGKRRPWGC 216 WG GG + GT +LGWGR R PG++ A RR C Sbjct: 106 WGS---GGALCGTAAGMLGWGRERGR---PGSSSAVALESQMTLRRKKRC 149 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.139 0.477 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,187,147 Number of Sequences: 37866 Number of extensions: 605557 Number of successful extensions: 1527 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 1512 Number of HSP's gapped (non-prelim): 50 length of query: 222 length of database: 18,247,518 effective HSP length: 98 effective length of query: 124 effective length of database: 14,536,650 effective search space: 1802544600 effective search space used: 1802544600 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.