Guide to the Human Genome
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Name: AMAC1 Sequence: fasta or formatted (338aa) NCBI GI: 22748975
Description:

acyl-malonyl condensing enzyme 1

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         33           2
 C cysteine            3.8         13           1
 D aspartate           2.1          7           1
 E glutamate           2.7          9           2
 F phenylalanine       3.0         10           2
 G glycine            10.1         34           3
 H histidine           2.1          7           1
 I isoleucine          4.4         15           3
 K lysine              0.9          3           1
 L leucine            17.5         59           3
 M methionine          0.9          3           1
 N asparagine          1.5          5           1
 P proline             7.1         24           2
 Q glutamine           3.0         10           1
 R arginine            3.6         12           1
 S serine              8.9         30           2
 T threonine           4.7         16           2
 V valine              9.5         32           3
 W tryptophan          1.5          5           1
 Y tyrosine            3.3         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-malonyl condensing enzyme 1 
AMAC1L2               0.913   acyl-malonyl condensing enzyme 
AMAC1L3               0.910   acyl-malonyl condensing enzyme 1-like 3 
AMAC1L1               0.910   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...
AMAC1L1               0.885   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...
TMEM22                0.198   transmembrane protein 22 
TMEM22                0.198   transmembrane protein 22 
TMEM22                0.198   transmembrane protein 22 
NNT                   0.015   nicotinamide nucleotide transhydrogenase 
NNT                   0.015   nicotinamide nucleotide transhydrogenase 
RHBDD2                0.014   rhomboid domain containing 2 isoform a 
OR2A2                 0.012   olfactory receptor, family 2, subfamily A, member 2...
TMEM19                0.011   transmembrane protein 19 
ABHD14A               0.011   abhydrolase domain containing 14A 
OR2A25                0.009   olfactory receptor, family 2, subfamily A, member 25...
OR2A1                 0.009   olfactory receptor, family 2, subfamily A, member 1 ...
OR2A5                 0.009   olfactory receptor, family 2, subfamily A, member 5 ...
OR2A42                0.009   olfactory receptor, family 2, subfamily A, member 42...
NOTCH3                0.008   Notch homolog 3 
KIAA0895L             0.008   hypothetical protein LOC653319 
OR2A14                0.008   olfactory receptor, family 2, subfamily A, member 14...
PSRC1                 0.008   proline/serine-rich coiled-coil 1 isoform c 
TMEM20                0.008   transmembrane protein 20 isoform 1 
TMEM20                0.008   transmembrane protein 20 isoform 2 
LOC401399             0.008   hypothetical protein LOC401399 
LOC100292804          0.006   PREDICTED: similar to hCG1739112 
LOC100289693          0.006   PREDICTED: hypothetical protein XP_002347909 
SIAH2                 0.006   seven in absentia homolog 2 
SLC38A5               0.006   solute carrier family 38, member 5 
LOC147710             0.006   PREDICTED: hypothetical protein LOC147710 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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