Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239740788
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740788 PREDICTED: hypothetical protein [Homo sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740839 PREDICTED: hypothetical protein XP_002344069 [Homo ... 631 0.0
gi|239740788 PREDICTED: hypothetical protein [Homo sapiens] 631 0.0
gi|239754275 PREDICTED: hypothetical protein [Homo sapiens] 471 e-133
gi|239748810 PREDICTED: hypothetical protein XP_002346829 [Homo ... 268 4e-72
gi|239742849 PREDICTED: hypothetical protein XP_002342662 [Homo ... 268 4e-72
gi|239740908 PREDICTED: hypothetical protein XP_002344097 [Homo ... 268 4e-72
gi|239740733 PREDICTED: hypothetical protein [Homo sapiens] 268 4e-72
gi|239740682 PREDICTED: hypothetical protein [Homo sapiens] 268 4e-72
gi|239740648 PREDICTED: hypothetical protein [Homo sapiens] 268 4e-72
gi|239513947 PREDICTED: hypothetical protein [Homo sapiens] 268 4e-72
gi|5032105 small optic lobes [Homo sapiens] 35 0.11
gi|239754873 PREDICTED: similar to hCG2040393 [Homo sapiens] 33 0.41
gi|239749412 PREDICTED: hypothetical protein XP_002347031 [Homo ... 33 0.41
gi|239743547 PREDICTED: hypothetical protein XP_002342883 [Homo ... 33 0.41
gi|110349719 titin isoform N2-A [Homo sapiens] 32 0.70
gi|115298674 nidogen 1 precursor [Homo sapiens] 32 0.70
gi|117938759 GNAS complex locus XLas [Homo sapiens] 32 0.91
gi|38569471 MUF1 protein [Homo sapiens] 32 0.91
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 31 1.2
gi|58331242 formin homology 2 domain containing 3 [Homo sapiens] 31 1.6
gi|66932999 testis-specific protein kinase 1 [Homo sapiens] 31 1.6
gi|58218970 protease, serine, 36 [Homo sapiens] 31 1.6
gi|31543811 proline rich Gla (G-carboxyglutamic acid) 3 (transme... 31 1.6
gi|7705851 coiled-coil-helix-coiled-coil-helix domain containing... 31 1.6
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 30 2.0
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 30 2.0
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 30 2.0
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 30 2.0
gi|92859670 solute carrier family 6 (neurotransmitter transporte... 30 2.0
gi|239754361 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
>gi|239740839 PREDICTED: hypothetical protein XP_002344069 [Homo
sapiens]
Length = 305
Score = 631 bits (1628), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MIIAEETEDSVPLQRPMATHDEAALPWLPLFLWERELGVTEGDSRGSEAGTENPPLPKCN 60
MIIAEETEDSVPLQRPMATHDEAALPWLPLFLWERELGVTEGDSRGSEAGTENPPLPKCN
Sbjct: 1 MIIAEETEDSVPLQRPMATHDEAALPWLPLFLWERELGVTEGDSRGSEAGTENPPLPKCN 60
Query: 61 HMYGPLEFSPCSLRVPDRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHL 120
HMYGPLEFSPCSLRVPDRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHL
Sbjct: 61 HMYGPLEFSPCSLRVPDRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHL 120
Query: 121 AAGLVSTKGVEKKYYSCLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSS 180
AAGLVSTKGVEKKYYSCLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSS
Sbjct: 121 AAGLVSTKGVEKKYYSCLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSS 180
Query: 181 DEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRR 240
DEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRR
Sbjct: 181 DEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRR 240
Query: 241 LPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQ 300
LPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQ
Sbjct: 241 LPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQ 300
Query: 301 LTRTL 305
LTRTL
Sbjct: 301 LTRTL 305
>gi|239740788 PREDICTED: hypothetical protein [Homo sapiens]
Length = 305
Score = 631 bits (1628), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MIIAEETEDSVPLQRPMATHDEAALPWLPLFLWERELGVTEGDSRGSEAGTENPPLPKCN 60
MIIAEETEDSVPLQRPMATHDEAALPWLPLFLWERELGVTEGDSRGSEAGTENPPLPKCN
Sbjct: 1 MIIAEETEDSVPLQRPMATHDEAALPWLPLFLWERELGVTEGDSRGSEAGTENPPLPKCN 60
Query: 61 HMYGPLEFSPCSLRVPDRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHL 120
HMYGPLEFSPCSLRVPDRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHL
Sbjct: 61 HMYGPLEFSPCSLRVPDRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHL 120
Query: 121 AAGLVSTKGVEKKYYSCLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSS 180
AAGLVSTKGVEKKYYSCLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSS
Sbjct: 121 AAGLVSTKGVEKKYYSCLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSS 180
Query: 181 DEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRR 240
DEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRR
Sbjct: 181 DEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRR 240
Query: 241 LPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQ 300
LPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQ
Sbjct: 241 LPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQ 300
Query: 301 LTRTL 305
LTRTL
Sbjct: 301 LTRTL 305
>gi|239754275 PREDICTED: hypothetical protein [Homo sapiens]
Length = 250
Score = 471 bits (1212), Expect = e-133
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 77 DRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHLAAGLVSTKGVEKKYYS 136
DRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHLAAGLVSTKGVEKKYYS
Sbjct: 22 DRDLNTRARSRGKHFSANIQGEIPGCAPGNTIILAPYQHGRGHLAAGLVSTKGVEKKYYS 81
Query: 137 CLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSSDEDIFLASAKARRVPR 196
CLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSSDEDIFLASAKARRVPR
Sbjct: 82 CLNIAHYCPKVQPIGDIPIIDNERYIFIPWSMDLRRAMNLAPSSDEDIFLASAKARRVPR 141
Query: 197 GVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRRLPETAAGRSRQTPKPY 256
GVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRRLPETAAGRSRQTPKPY
Sbjct: 142 GVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSRSQPWTRRLPETAAGRSRQTPKPY 201
Query: 257 SLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQLTRTL 305
SLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQLTRTL
Sbjct: 202 SLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQLTRTL 250
>gi|239748810 PREDICTED: hypothetical protein XP_002346829 [Homo
sapiens]
Length = 132
Score = 268 bits (685), Expect = 4e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 174 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 233
MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR
Sbjct: 1 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 60
Query: 234 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR
Sbjct: 61 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 120
Query: 294 LHRVGSQLTRTL 305
LHRVGSQLTRTL
Sbjct: 121 LHRVGSQLTRTL 132
>gi|239742849 PREDICTED: hypothetical protein XP_002342662 [Homo
sapiens]
Length = 132
Score = 268 bits (685), Expect = 4e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 174 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 233
MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR
Sbjct: 1 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 60
Query: 234 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR
Sbjct: 61 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 120
Query: 294 LHRVGSQLTRTL 305
LHRVGSQLTRTL
Sbjct: 121 LHRVGSQLTRTL 132
>gi|239740908 PREDICTED: hypothetical protein XP_002344097 [Homo
sapiens]
Length = 132
Score = 268 bits (685), Expect = 4e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 174 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 233
MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR
Sbjct: 1 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 60
Query: 234 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR
Sbjct: 61 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 120
Query: 294 LHRVGSQLTRTL 305
LHRVGSQLTRTL
Sbjct: 121 LHRVGSQLTRTL 132
>gi|239740733 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 268 bits (685), Expect = 4e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 174 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 233
MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR
Sbjct: 1 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 60
Query: 234 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR
Sbjct: 61 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 120
Query: 294 LHRVGSQLTRTL 305
LHRVGSQLTRTL
Sbjct: 121 LHRVGSQLTRTL 132
>gi|239740682 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 268 bits (685), Expect = 4e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 174 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 233
MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR
Sbjct: 1 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 60
Query: 234 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR
Sbjct: 61 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 120
Query: 294 LHRVGSQLTRTL 305
LHRVGSQLTRTL
Sbjct: 121 LHRVGSQLTRTL 132
>gi|239740648 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 268 bits (685), Expect = 4e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 174 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 233
MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR
Sbjct: 1 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 60
Query: 234 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR
Sbjct: 61 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 120
Query: 294 LHRVGSQLTRTL 305
LHRVGSQLTRTL
Sbjct: 121 LHRVGSQLTRTL 132
>gi|239513947 PREDICTED: hypothetical protein [Homo sapiens]
Length = 132
Score = 268 bits (685), Expect = 4e-72
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 174 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 233
MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR
Sbjct: 1 MNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGCTYRSR 60
Query: 234 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR
Sbjct: 61 SQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 120
Query: 294 LHRVGSQLTRTL 305
LHRVGSQLTRTL
Sbjct: 121 LHRVGSQLTRTL 132
>gi|5032105 small optic lobes [Homo sapiens]
Length = 1086
Score = 34.7 bits (78), Expect = 0.11
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 236 PWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARL 294
P++ L RSR+ P P PE+A PS P A C APQ S A A+ LA L
Sbjct: 234 PFSSTLQNNPVPRSRREVPPQLQPPVPEAAQPS--PSAGCRGAPQGSGWAGASRLAELL 290
>gi|239754873 PREDICTED: similar to hCG2040393 [Homo sapiens]
Length = 333
Score = 32.7 bits (73), Expect = 0.41
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 195 PRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGC--TYRSRSQPWTRRLPETAAGRSRQT 252
P G A +G R P T SC + +SG T R+ S P ++P T G T
Sbjct: 125 PPGAATATGSRHRREPPSPGATTAGSCHLRSSGSTGTRRAPSHPAALQVPYTREGPREPT 184
Query: 253 PKPYSLPRSPESAAPSVC 270
P P P+ A S C
Sbjct: 185 P-----PAGPQGFAGSFC 197
>gi|239749412 PREDICTED: hypothetical protein XP_002347031 [Homo
sapiens]
Length = 333
Score = 32.7 bits (73), Expect = 0.41
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 195 PRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGC--TYRSRSQPWTRRLPETAAGRSRQT 252
P G A +G R P T SC + +SG T R+ S P ++P T G T
Sbjct: 125 PPGAATATGSRHRREPPSPGATTAGSCHLRSSGSTGTRRAPSHPAALQVPYTREGPREPT 184
Query: 253 PKPYSLPRSPESAAPSVC 270
P P P+ A S C
Sbjct: 185 P-----PAGPQGFAGSFC 197
>gi|239743547 PREDICTED: hypothetical protein XP_002342883 [Homo
sapiens]
Length = 333
Score = 32.7 bits (73), Expect = 0.41
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 195 PRGVAVMSGMRKVSTEPICLPLTHSSCSMVTSGC--TYRSRSQPWTRRLPETAAGRSRQT 252
P G A +G R P T SC + +SG T R+ S P ++P T G T
Sbjct: 125 PPGAATATGSRHRREPPSPGATTAGSCHLRSSGSTGTRRAPSHPAALQVPYTREGPREPT 184
Query: 253 PKPYSLPRSPESAAPSVC 270
P P P+ A S C
Sbjct: 185 P-----PAGPQGFAGSFC 197
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 32.0 bits (71), Expect = 0.70
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 240 RLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAA 286
++PE + P ++P PES P V P AP V P+ +PAA
Sbjct: 10552 KVPEVPKAAVPEKKVPEAIPPKPESPPPEV-PEAPKEVVPEKKVPAA 10597
>gi|115298674 nidogen 1 precursor [Homo sapiens]
Length = 1247
Score = 32.0 bits (71), Expect = 0.70
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 163 FIPWSMDLRRAMNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSCS 222
F W M+ A++LA S + D F + R + ++T P H+ CS
Sbjct: 1165 FTDWKMNSVVALDLAISKETDAFQPHKQTR-----------LYGITTALSQCPQGHNYCS 1213
Query: 223 MVTSGCTYRSRSQPWTR--RLPETAAG 247
+ GCT+ + P +R R P+ G
Sbjct: 1214 VNNGGCTHLCLATPGSRTCRCPDNTLG 1240
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 31.6 bits (70), Expect = 0.91
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 253 PKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGS 299
P+ + P + E+ A V P AP AP + PAA+AT AA++ R S
Sbjct: 471 PEAPAAPAAAETRAAHVAPAAPDAGAP--TAPAASATRAAQVRRAAS 515
>gi|38569471 MUF1 protein [Homo sapiens]
Length = 812
Score = 31.6 bits (70), Expect = 0.91
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 19/114 (16%)
Query: 177 APSSDE-DIFLASAKARRVPR---GVAVMSGMRKVSTE--PICLPLTH----SSCSMVTS 226
APS DE + L S + RR A+M+ RK + P P T S+ +T+
Sbjct: 274 APSRDEGSLLLGSRRPRRDAAERCAAALMASRRKSEAKQMPRAAPATRVTRRSTQESLTA 333
Query: 227 GCT---------YRSRSQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCP 271
G T S P T+R P A S + S R+P S+AP P
Sbjct: 334 GGTDLKRELHPPATSHEAPGTKRSPSAPAATSSASSSTSSYKRAPASSAPQPKP 387
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 31.2 bits (69), Expect = 1.2
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 233 RSQPWTRRLPETAA----GRS--RQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAA 286
R + W RRLP +AA GR R P P P P P+ G P AP S PA
Sbjct: 105 RQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPR-LPPAGLAGGPADSAPPSPAPAP 163
Query: 287 AATLAAR 293
+ A R
Sbjct: 164 RSRPAPR 170
>gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]
Length = 1439
Score = 30.8 bits (68), Expect = 1.6
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 190 KARRVPRGVAVMSGMRKVSTEPICL-PLTHSSCSMVTSGCTYRSRSQPWTRRLPETAAGR 248
++R V RG A +S P CL PL+HS S + S S P T P+ +AG
Sbjct: 516 RSRSVSRGRADLSLDLTSPAAPACLAPLSHSPSSSDSQEALTVSASSPGTPHHPQASAG- 574
Query: 249 SRQTPKPYSLPRSPESAA 266
P+P S PE+ A
Sbjct: 575 ---DPEPES-EAEPEAEA 588
>gi|66932999 testis-specific protein kinase 1 [Homo sapiens]
Length = 626
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 235 QPWTRR---LPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQS 281
+PW R LP AA + P S PR P+ P CPG C + P S
Sbjct: 532 EPWNRAQHSLPRAAALERTEPSPPPSAPREPDEGLP--CPG--CCLGPFS 577
>gi|58218970 protease, serine, 36 [Homo sapiens]
Length = 855
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 249 SRQTPKPYSLPRSPESAAPSVCPGAPCWVA----PQSSLPAAAA 288
SR P P +LP A + PGA CWV PQ +P AAA
Sbjct: 687 SRVEPSPSALPICLHPAG--IPPGASCWVLGWKEPQDRVPVAAA 728
>gi|31543811 proline rich Gla (G-carboxyglutamic acid) 3
(transmembrane) [Homo sapiens]
Length = 231
Score = 30.8 bits (68), Expect = 1.6
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 162 IFIPWSMDLRRAMNLAPSSDEDIFLASAKARRVPRGVAVMSGMRKVSTEPICLPLTHSSC 221
+FI W L++A PS ++ +LAS +PR V V G EP SS
Sbjct: 97 LFIIWRCQLQKATRHHPSYAQNRYLASRAGHTLPR-VMVYRGTVHSQGEPSGHREAASSP 155
Query: 222 SMVT-----SGCTYRSRSQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAP 267
+V T R S T LPE + R TP P P E AP
Sbjct: 156 QVVLGPSRGGRTTVRLES---TLYLPELSLSRLSSTPPP---PSYEEVTAP 200
>gi|7705851 coiled-coil-helix-coiled-coil-helix domain containing 2
[Homo sapiens]
Length = 151
Score = 30.8 bits (68), Expect = 1.6
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 232 SRSQPWTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLA 291
SRS+ P + A + R P+P + + P +A PS G+ Q L A AT A
Sbjct: 5 SRSRTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSAV-GSSAAAPRQPGLMAQMATTA 63
Query: 292 ARLHRVGSQLTRTL 305
A + VGS + TL
Sbjct: 64 AGV-AVGSAVGHTL 76
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 237 WTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
W+R AG SR +P+ +PRS A P G P +A QS P + A AAR
Sbjct: 275 WSRE--RAGAGLSRDSPQ---VPRSGSWARPCREQGHPAVLALQSPAPPSLARAAAR 326
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 237 WTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
W+R AG SR +P+ +PRS A P G P +A QS P + A AAR
Sbjct: 275 WSRE--RAGAGLSRDSPQ---VPRSGSWARPCREQGHPAVLALQSPAPPSLARAAAR 326
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 239 RRLPETAAGRSRQTPKPYSL-PRSPESAAPSVCPGAPCWVAPQSSLPAAAATLA 291
RR T S P ++ P + +A S+C +P AP ++ PAAAA LA
Sbjct: 105 RRPAATLGAASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAASPAAAAPLA 158
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 237 WTRRLPETAAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAAR 293
W+R AG SR +P+ +PRS A P G P +A QS P + A AAR
Sbjct: 275 WSRE--RAGAGLSRDSPQ---VPRSGSWARPCREQGHPAVLALQSPAPPSLARAAAR 326
>gi|92859670 solute carrier family 6 (neurotransmitter transporter,
glycine), member 5 [Homo sapiens]
Length = 797
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 261 SPESAAPSVCPGAPCW--VAPQSSLPAAAATLAARLHRVGSQLTRT 304
SPE+AA P PC +P+ LPAAAA R+ R S +T
Sbjct: 16 SPEAAAAQGHPDGPCAPRTSPEQELPAAAAPPPPRVPRSASTGAQT 61
>gi|239754361 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 30.0 bits (66), Expect = 2.7
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Query: 245 AAGRSRQTPKPYSLPRSPESAAPSVCPGAPCWVAPQSSLPAAAATLAARLHRVGSQLTRT 304
AA S + P P +P SP + AP AP ++ P AAA +RL R + R
Sbjct: 56 AAADSSRWPLPRPVPGSPAAVAP----------APGAARPGAAAPRRSRLRRNSTSPARP 105
Query: 305 L 305
L
Sbjct: 106 L 106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,335,692
Number of Sequences: 37866
Number of extensions: 666560
Number of successful extensions: 2922
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 2881
Number of HSP's gapped (non-prelim): 90
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.