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Search of human proteins with 23957690
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23957690 component of oligomeric golgi complex 7 [Homo
sapiens]
(770 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens] 1519 0.0
gi|67782321 spectrin beta isoform a [Homo sapiens] 40 0.006
gi|67782319 spectrin beta isoform b [Homo sapiens] 40 0.006
gi|62414289 vimentin [Homo sapiens] 38 0.041
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 37 0.069
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 37 0.069
gi|34577114 cytomatrix protein p110 [Homo sapiens] 37 0.090
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 36 0.12
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 36 0.12
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 36 0.12
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 36 0.12
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 36 0.12
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 36 0.12
gi|28460688 taxilin [Homo sapiens] 36 0.15
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] 35 0.20
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 35 0.34
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 35 0.34
gi|23510448 minichromosome maintenance complex component 5 [Homo... 34 0.45
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 34 0.45
gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens] 34 0.59
gi|56788377 nucleoporin like 1 isoform b [Homo sapiens] 34 0.59
gi|30102928 nucleoporin like 1 isoform a [Homo sapiens] 34 0.59
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 34 0.59
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 34 0.59
gi|40354195 keratin 18 [Homo sapiens] 33 0.77
gi|4557888 keratin 18 [Homo sapiens] 33 0.77
gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens] 33 0.77
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 33 0.77
gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens] 33 1.0
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 33 1.0
>gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens]
Length = 770
Score = 1519 bits (3934), Expect = 0.0
Identities = 770/770 (100%), Positives = 770/770 (100%)
Query: 1 MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSH 60
MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSH
Sbjct: 1 MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSH 60
Query: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQL 120
QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQL
Sbjct: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQL 120
Query: 121 AAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEAL 180
AAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEAL
Sbjct: 121 AAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEAL 180
Query: 181 KNRLEALASPQIVAAFTSQAVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLAAWQELC 240
KNRLEALASPQIVAAFTSQAVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLAAWQELC
Sbjct: 181 KNRLEALASPQIVAAFTSQAVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLAAWQELC 240
Query: 241 QSDLSLDRQLTGLYDALLGAWHTQIQWATQVFQKPHEVVMVLLIQTLGALMPSLPSCLSN 300
QSDLSLDRQLTGLYDALLGAWHTQIQWATQVFQKPHEVVMVLLIQTLGALMPSLPSCLSN
Sbjct: 241 QSDLSLDRQLTGLYDALLGAWHTQIQWATQVFQKPHEVVMVLLIQTLGALMPSLPSCLSN 300
Query: 301 GVERAGPEQELTRLLEFYDATAHFAKGLEMALLPHLHEHNLVKVTELVDAVYDPYKPYQL 360
GVERAGPEQELTRLLEFYDATAHFAKGLEMALLPHLHEHNLVKVTELVDAVYDPYKPYQL
Sbjct: 301 GVERAGPEQELTRLLEFYDATAHFAKGLEMALLPHLHEHNLVKVTELVDAVYDPYKPYQL 360
Query: 361 KYGDMEESNLLIQMSAVPLEHGEVIDCVQELSHSVNKLFGLASAAVDRCVRFTNGLGTCG 420
KYGDMEESNLLIQMSAVPLEHGEVIDCVQELSHSVNKLFGLASAAVDRCVRFTNGLGTCG
Sbjct: 361 KYGDMEESNLLIQMSAVPLEHGEVIDCVQELSHSVNKLFGLASAAVDRCVRFTNGLGTCG 420
Query: 421 LLSALKSLFAKYVSDFTSTLQSIRKKCKLDHIPPNSLFQEDWTAFQNSIRIIATCGELLR 480
LLSALKSLFAKYVSDFTSTLQSIRKKCKLDHIPPNSLFQEDWTAFQNSIRIIATCGELLR
Sbjct: 421 LLSALKSLFAKYVSDFTSTLQSIRKKCKLDHIPPNSLFQEDWTAFQNSIRIIATCGELLR 480
Query: 481 HCGDFEQQLANRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNP 540
HCGDFEQQLANRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNP
Sbjct: 481 HCGDFEQQLANRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNP 540
Query: 541 AEYASLMEILYTLKEKGSSNHNLLAAPRAALTRLNQQAHQLAFDSVFLRIKQQLLLISKM 600
AEYASLMEILYTLKEKGSSNHNLLAAPRAALTRLNQQAHQLAFDSVFLRIKQQLLLISKM
Sbjct: 541 AEYASLMEILYTLKEKGSSNHNLLAAPRAALTRLNQQAHQLAFDSVFLRIKQQLLLISKM 600
Query: 601 DSWNTAGIGETLTDELPAFSLTPLEYISNIGQYIMSLPLNLEPFVTQEDSALELALHAGK 660
DSWNTAGIGETLTDELPAFSLTPLEYISNIGQYIMSLPLNLEPFVTQEDSALELALHAGK
Sbjct: 601 DSWNTAGIGETLTDELPAFSLTPLEYISNIGQYIMSLPLNLEPFVTQEDSALELALHAGK 660
Query: 661 LPFPPEQGDELPELDNMADNWLGSIARATMQTYCDAILQIPELSPHSAKQLATDIDYLIN 720
LPFPPEQGDELPELDNMADNWLGSIARATMQTYCDAILQIPELSPHSAKQLATDIDYLIN
Sbjct: 661 LPFPPEQGDELPELDNMADNWLGSIARATMQTYCDAILQIPELSPHSAKQLATDIDYLIN 720
Query: 721 VMDALGLQPSRTLQHIVTLLKTRPEDYRQVSKGLPRRLATTVATMRSVNY 770
VMDALGLQPSRTLQHIVTLLKTRPEDYRQVSKGLPRRLATTVATMRSVNY
Sbjct: 721 VMDALGLQPSRTLQHIVTLLKTRPEDYRQVSKGLPRRLATTVATMRSVNY 770
>gi|67782321 spectrin beta isoform a [Homo sapiens]
Length = 2328
Score = 40.4 bits (93), Expect = 0.006
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 2 DFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEV--NHAVEETS 59
+F +F D D+K W+ A R S E G+ +G L K + F++E+ + V E
Sbjct: 744 NFFQFQGDADDLKAWLQDAHRLLSGEDV-GQDEGATRALGKKHKDFLEELEESRGVMEHL 802
Query: 60 HQALQNMPKVLRDVEALKQEASFLKE--QMILVKEDIKKFEQDTSQSMQVLVEIDQVKSR 117
Q Q P+ RD + L+E Q ++ + D+++ Q +Q +++ V
Sbjct: 803 EQQAQGFPEEFRDSPDVTHRLQALRELYQQVVAQADLRQ------QRLQEALDLYTVFGE 856
Query: 118 MQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPD 169
+ E +KW A++E +D+ V+ + + + L+ D
Sbjct: 857 TDACELWMGEKEKW---LAEMEMPDTLEDLEVVQHRFDILDQEMKTLMTQID 905
>gi|67782319 spectrin beta isoform b [Homo sapiens]
Length = 2137
Score = 40.4 bits (93), Expect = 0.006
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 2 DFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEV--NHAVEETS 59
+F +F D D+K W+ A R S E G+ +G L K + F++E+ + V E
Sbjct: 744 NFFQFQGDADDLKAWLQDAHRLLSGEDV-GQDEGATRALGKKHKDFLEELEESRGVMEHL 802
Query: 60 HQALQNMPKVLRDVEALKQEASFLKE--QMILVKEDIKKFEQDTSQSMQVLVEIDQVKSR 117
Q Q P+ RD + L+E Q ++ + D+++ Q +Q +++ V
Sbjct: 803 EQQAQGFPEEFRDSPDVTHRLQALRELYQQVVAQADLRQ------QRLQEALDLYTVFGE 856
Query: 118 MQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPD 169
+ E +KW A++E +D+ V+ + + + L+ D
Sbjct: 857 TDACELWMGEKEKW---LAEMEMPDTLEDLEVVQHRFDILDQEMKTLMTQID 905
>gi|62414289 vimentin [Homo sapiens]
Length = 466
Score = 37.7 bits (86), Expect = 0.041
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 34/195 (17%)
Query: 71 RDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRM------------ 118
R VE+L++E +FLK+ L +E+I++ + Q V +++D K +
Sbjct: 222 RKVESLQEEIAFLKK---LHEEEIQELQAQI-QEQHVQIDVDVSKPDLTAALRDVRQQYE 277
Query: 119 QLAAESLQEADKW-STLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHL 177
+AA++LQEA++W + AD+ E + A+ AK + + S C +
Sbjct: 278 SVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQV------QSLTC-EV 330
Query: 178 EALKNRLEALASP--QIVAAFTSQAVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLAA 235
+ALK E+L ++ F +A + ++ EI M + +A + L
Sbjct: 331 DALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARH--------LRE 382
Query: 236 WQELCQSDLSLDRQL 250
+Q+L ++LD ++
Sbjct: 383 YQDLLNVKMALDIEI 397
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 37.0 bits (84), Expect = 0.069
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 71 RDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADK 130
+ +E L+++ ++QM +KE +K + DT+ + L +++ + + E L+E
Sbjct: 578 KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKE--- 634
Query: 131 WSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLEALAS 189
D +E K ++I L ++ + +L D SEK L LK +LAS
Sbjct: 635 ----QRDRDEREKQEEIDNYKKDLKDLKEKVSLL--QGDLSEKEASLLDLKEHASSLAS 687
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 37.0 bits (84), Expect = 0.069
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 71 RDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADK 130
+ +E L+++ ++QM +KE +K + DT+ + L +++ + + E L+E
Sbjct: 550 KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKE--- 606
Query: 131 WSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLEALAS 189
D +E K ++I L ++ + +L D SEK L LK +LAS
Sbjct: 607 ----QRDRDEREKQEEIDNYKKDLKDLKEKVSLL--QGDLSEKEASLLDLKEHASSLAS 659
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 36.6 bits (83), Expect = 0.090
Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 21/191 (10%)
Query: 71 RDVEALKQEASFLKEQMILVKED----IKKFEQDTSQSMQVLVEIDQVKSRM-QLAAESL 125
R++ L+ E LK +L ED IK+ E S S + +IDQ+K + + +E L
Sbjct: 392 RNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELL 451
Query: 126 QEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLE 185
K TLS + Q I V+ LT + +L ++AL+ RLE
Sbjct: 452 ALQTKLETLSNQNSDC--KQHIEVLKESLTAKEQRAAILQ---------TEVDALRLRLE 500
Query: 186 ALASPQIVAAFTSQAVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLAAWQELCQSDL- 244
S + T Q D ++ + EI M +L K K+ +L E Q L
Sbjct: 501 EKES--FLNKKTKQLQDLTEEKGTLAGEIRDMKDMLE--VKERKINVLQKKIENLQEQLR 556
Query: 245 SLDRQLTGLYD 255
D+QLT L D
Sbjct: 557 DKDKQLTNLKD 567
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 36.2 bits (82), Expect = 0.12
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 43 KLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS 102
KLQ ++ + ++++ KV +V ++ E S +K + ++ +K EQ
Sbjct: 794 KLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQ--- 850
Query: 103 QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLM 162
E++++ + Q A E L E +++ S+ +EE K + I +S ++T ++ +L
Sbjct: 851 -------EVNELLQKFQQAQEELAEMKRYAESSSKLEED-KDKKINEMSKEVTKLKEALN 902
Query: 163 ML----VDTPDYSEKCVHLEALKNRLEAL 187
L T + LEAL+ +++ L
Sbjct: 903 SLSQLSYSTSSSKRQSQQLEALQQQVKQL 931
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 36.2 bits (82), Expect = 0.12
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 43 KLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS 102
KLQ ++ + ++++ KV +V ++ E S +K + ++ +K EQ
Sbjct: 783 KLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQ--- 839
Query: 103 QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLM 162
E++++ + Q A E L E +++ S+ +EE K + I +S ++T ++ +L
Sbjct: 840 -------EVNELLQKFQQAQEELAEMKRYAESSSKLEED-KDKKINEMSKEVTKLKEALN 891
Query: 163 ML----VDTPDYSEKCVHLEALKNRLEAL 187
L T + LEAL+ +++ L
Sbjct: 892 SLSQLSYSTSSSKRQSQQLEALQQQVKQL 920
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 36.2 bits (82), Expect = 0.12
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 43 KLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS 102
KLQ ++ + ++++ KV +V ++ E S +K + ++ +K EQ
Sbjct: 762 KLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQ--- 818
Query: 103 QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLM 162
E++++ + Q A E L E +++ S+ +EE K + I +S ++T ++ +L
Sbjct: 819 -------EVNELLQKFQQAQEELAEMKRYAESSSKLEED-KDKKINEMSKEVTKLKEALN 870
Query: 163 ML----VDTPDYSEKCVHLEALKNRLEAL 187
L T + LEAL+ +++ L
Sbjct: 871 SLSQLSYSTSSSKRQSQQLEALQQQVKQL 899
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 36.2 bits (82), Expect = 0.12
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 43 KLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS 102
KLQ ++ + ++++ KV +V ++ E S +K + ++ +K EQ
Sbjct: 791 KLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQ--- 847
Query: 103 QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLM 162
E++++ + Q A E L E +++ S+ +EE K + I +S ++T ++ +L
Sbjct: 848 -------EVNELLQKFQQAQEELAEMKRYAESSSKLEED-KDKKINEMSKEVTKLKEALN 899
Query: 163 ML----VDTPDYSEKCVHLEALKNRLEAL 187
L T + LEAL+ +++ L
Sbjct: 900 SLSQLSYSTSSSKRQSQQLEALQQQVKQL 928
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 36.2 bits (82), Expect = 0.12
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 43 KLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS 102
KLQ ++ + ++++ KV +V ++ E S +K + ++ +K EQ
Sbjct: 791 KLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQ--- 847
Query: 103 QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLM 162
E++++ + Q A E L E +++ S+ +EE K + I +S ++T ++ +L
Sbjct: 848 -------EVNELLQKFQQAQEELAEMKRYAESSSKLEED-KDKKINEMSKEVTKLKEALN 899
Query: 163 ML----VDTPDYSEKCVHLEALKNRLEAL 187
L T + LEAL+ +++ L
Sbjct: 900 SLSQLSYSTSSSKRQSQQLEALQQQVKQL 928
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 36.2 bits (82), Expect = 0.12
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 43 KLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS 102
KLQ ++ + ++++ KV +V ++ E S +K + ++ +K EQ
Sbjct: 791 KLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQ--- 847
Query: 103 QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLM 162
E++++ + Q A E L E +++ S+ +EE K + I +S ++T ++ +L
Sbjct: 848 -------EVNELLQKFQQAQEELAEMKRYAESSSKLEED-KDKKINEMSKEVTKLKEALN 899
Query: 163 ML----VDTPDYSEKCVHLEALKNRLEAL 187
L T + LEAL+ +++ L
Sbjct: 900 SLSQLSYSTSSSKRQSQQLEALQQQVKQL 928
>gi|28460688 taxilin [Homo sapiens]
Length = 546
Score = 35.8 bits (81), Expect = 0.15
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Query: 41 VMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQD 100
+ + Q ++E + L+ + R E +KQ+ + LK+Q+ L E ++F+
Sbjct: 341 LQQAQEMLKEAEERHQREKDFLLKEAVESQRMCELMKQQETHLKQQLALYTEKFEEFQNT 400
Query: 101 TSQSMQVLVEIDQVKSRM-----QLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLT 155
S+S +V Q +M +L E+ +W + + + E ++ V +L
Sbjct: 401 LSKSSEVFTTFKQEMEKMTKKIKKLEKETTMYRSRWESSNKALLE--MAEEKTVRDKELE 458
Query: 156 GMQNSLMML 164
G+Q + L
Sbjct: 459 GLQVKIQRL 467
>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
Length = 1498
Score = 35.4 bits (80), Expect = 0.20
Identities = 36/179 (20%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 48 IQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKED-------IKKFEQD 100
++E ET + + + VE L+QE + LK+QM +KE ++ + +D
Sbjct: 799 LEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRD 858
Query: 101 TSQSMQVLVEIDQVKSRM-----QLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLT 155
+ Q++ E+ + R+ +L E +Q + T A++ + ++A + +
Sbjct: 859 ATSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHR--EVAQVRQHMA 916
Query: 156 GMQNSLMMLVDTPDYSEKCVHLEALK-NRLEALASPQIVAAFTSQAVDQSKVFVKVFTE 213
++ L D E HL++L+ ++ + +A + A Q + + K TE
Sbjct: 917 DLEGHLQSAQKERDEME--THLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITE 973
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 34.7 bits (78), Expect = 0.34
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 15 EWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSHQALQNMPKV-LRDV 73
EW N A A +A + KL L +QE +A+E+ Q + + + L D
Sbjct: 4188 EWDNLARSDAESTAVHLEA-------LKKLALALQERKYAIEDLKDQKQKMIEHLNLDDK 4240
Query: 74 EALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWST 133
E +K++ S L+++ +++ IK+ Q S+ L E++ V+SR Q E ++ A++
Sbjct: 4241 ELVKEQTSHLEQRWFQLEDLIKRKIQ---VSVTNLEELNVVQSRFQ---ELMEWAEEQQP 4294
Query: 134 LSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLEAL 187
A+ + D+A QN LM D+ C LEA + L++L
Sbjct: 4295 NIAEALKQSPPPDMA---------QNLLM------DHLAICSELEAKQMLLKSL 4333
Score = 32.0 bits (71), Expect = 2.2
Identities = 56/290 (19%), Positives = 121/290 (41%), Gaps = 28/290 (9%)
Query: 49 QEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVL 108
+E + E + QA +N+ K ++ Q L++Q +KE +KK E + ++ +
Sbjct: 1390 KEFSKRTESIAVQA-ENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLEDTLEEDIKTM 1448
Query: 109 VEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTP 168
+ VK++ + TLS I E K + S+ MQ
Sbjct: 1449 ---EMVKTKWD------HFGSNFETLSVWITEKEKELNALETSSSAMDMQ---------- 1489
Query: 169 DYSEKCVHLEALKNRLEALASPQIVAAFTSQAV---DQSKVFVKVFTEIDRMPQLLAYYY 225
S+ V ++ ++++L ++ + A +Q V + +++ K+ T+I R + L +
Sbjct: 1490 -ISQIKVTIQEIESKLSSIVGLEEEAQSFAQFVTTGESARIKAKL-TQIRRYGEELREHA 1547
Query: 226 KCHKVQLLA--AWQELCQSDLSLDRQLTGLYDALLGAWHTQIQWATQVFQKPHE-VVMVL 282
+C + +L + Q+ + +L +Q ++ L AT+ ++ E + +
Sbjct: 1548 QCLEGTILGHLSQQQKFEENLRKIQQSVSEFEDKLAVPIKICSSATETYKVLQEHMDLCQ 1607
Query: 283 LIQTLGALMPSLPSCLSNGVERAGPEQELTRLLEFYDATAHFAKGLEMAL 332
+++L + + + + V R QE L + Y+ AK + AL
Sbjct: 1608 ALESLSSAITAFSASARKVVNRDSCVQEAAALQQQYEDILRRAKERQTAL 1657
Score = 31.2 bits (69), Expect = 3.8
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 51 VNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDT-SQSMQVLV 109
+N A ET +AL+ + + +++++ + S +E + + E ++ ++M L+
Sbjct: 2335 MNCAQNETC-EALKKVKDIQKELQSQQSNISSTQENLNSLCRKYHSAELESLGRAMTGLI 2393
Query: 110 E----IDQVKSRMQLA---------AESLQEADKW--STLSADIEETFKTQDIAVISAKL 154
+ + Q+ S+ Q + +ES+QE +W +A E + +T D V+ AKL
Sbjct: 2394 KKHEAVSQLCSKTQASLQESLEKHFSESMQEFQEWFLGAKAAAKESSDRTGDSKVLEAKL 2453
Query: 155 TGMQNSLMMLVDTPDYSEKCVHLEALKNRLEALASPQIVAAFTSQAVDQSKVF 207
+QN +L D K + L A S QIV++ Q ++ F
Sbjct: 2454 HDLQN---ILDSVSDGQSKLDAVTQEGQTLYAHLSKQIVSSIQEQITKANEEF 2503
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 34.7 bits (78), Expect = 0.34
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 15 EWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSHQALQNMPKV-LRDV 73
EW N A A +A + KL L +QE +A+E+ Q + + + L D
Sbjct: 4259 EWDNLARSDAESTAVHLEA-------LKKLALALQERKYAIEDLKDQKQKMIEHLNLDDK 4311
Query: 74 EALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWST 133
E +K++ S L+++ +++ IK+ Q S+ L E++ V+SR Q E ++ A++
Sbjct: 4312 ELVKEQTSHLEQRWFQLEDLIKRKIQ---VSVTNLEELNVVQSRFQ---ELMEWAEEQQP 4365
Query: 134 LSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLEAL 187
A+ + D+A QN LM D+ C LEA + L++L
Sbjct: 4366 NIAEALKQSPPPDMA---------QNLLM------DHLAICSELEAKQMLLKSL 4404
Score = 32.0 bits (71), Expect = 2.2
Identities = 56/290 (19%), Positives = 121/290 (41%), Gaps = 28/290 (9%)
Query: 49 QEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVL 108
+E + E + QA +N+ K ++ Q L++Q +KE +KK E + ++ +
Sbjct: 1383 KEFSKRTESIAVQA-ENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLEDTLEEDIKTM 1441
Query: 109 VEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTP 168
+ VK++ + TLS I E K + S+ MQ
Sbjct: 1442 ---EMVKTKWD------HFGSNFETLSVWITEKEKELNALETSSSAMDMQ---------- 1482
Query: 169 DYSEKCVHLEALKNRLEALASPQIVAAFTSQAV---DQSKVFVKVFTEIDRMPQLLAYYY 225
S+ V ++ ++++L ++ + A +Q V + +++ K+ T+I R + L +
Sbjct: 1483 -ISQIKVTIQEIESKLSSIVGLEEEAQSFAQFVTTGESARIKAKL-TQIRRYGEELREHA 1540
Query: 226 KCHKVQLLA--AWQELCQSDLSLDRQLTGLYDALLGAWHTQIQWATQVFQKPHE-VVMVL 282
+C + +L + Q+ + +L +Q ++ L AT+ ++ E + +
Sbjct: 1541 QCLEGTILGHLSQQQKFEENLRKIQQSVSEFEDKLAVPIKICSSATETYKVLQEHMDLCQ 1600
Query: 283 LIQTLGALMPSLPSCLSNGVERAGPEQELTRLLEFYDATAHFAKGLEMAL 332
+++L + + + + V R QE L + Y+ AK + AL
Sbjct: 1601 ALESLSSAITAFSASARKVVNRDSCVQEAAALQQQYEDILRRAKERQTAL 1650
Score = 31.2 bits (69), Expect = 3.8
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 51 VNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDT-SQSMQVLV 109
+N A ET +AL+ + + +++++ + S +E + + E ++ ++M L+
Sbjct: 2328 MNCAQNETC-EALKKVKDIQKELQSQQSNISSTQENLNSLCRKYHSAELESLGRAMTGLI 2386
Query: 110 E----IDQVKSRMQLA---------AESLQEADKW--STLSADIEETFKTQDIAVISAKL 154
+ + Q+ S+ Q + +ES+QE +W +A E + +T D V+ AKL
Sbjct: 2387 KKHEAVSQLCSKTQASLQESLEKHFSESMQEFQEWFLGAKAAAKESSDRTGDSKVLEAKL 2446
Query: 155 TGMQNSLMMLVDTPDYSEKCVHLEALKNRLEALASPQIVAAFTSQAVDQSKVF 207
+QN +L D K + L A S QIV++ Q ++ F
Sbjct: 2447 HDLQN---ILDSVSDGQSKLDAVTQEGQTLYAHLSKQIVSSIQEQITKANEEF 2496
>gi|23510448 minichromosome maintenance complex component 5 [Homo
sapiens]
Length = 734
Score = 34.3 bits (77), Expect = 0.45
Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 78 QEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLA-AESLQEADKWSTLSA 136
+ A LK + I+++ ++ E+D+ + + + + Q+++ +++A A S + ++T A
Sbjct: 577 EAAEKLKNRYIIMRSGARQHERDSDRRSSIPITVRQLEAIVRIAEALSKMKLQPFAT-EA 635
Query: 137 DIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLEALASP----QI 192
D+EE + ++ + A L+G + + D E +E R A+ S I
Sbjct: 636 DVEEALRLFQVSTLDAALSGTLSGVEGFTSQED-QEMLSRIEKQLKRRFAIGSQVSEHSI 694
Query: 193 VAAFTSQ 199
+ FT Q
Sbjct: 695 IKDFTKQ 701
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 34.3 bits (77), Expect = 0.45
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 41 VMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVK--EDIKK-- 96
V LQ I+E + V E S + M ++ + +L E LKEQ+ L+ E+ KK
Sbjct: 889 VETLQQTIEEKDQQVTEISFSMTEKMVQLNEEKFSLGVEIKTLKEQLNLLSRAEEAKKEQ 948
Query: 97 FEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAK 153
E+D S + D++ Q++ E LQ ++ L + E+ + A+I+ K
Sbjct: 949 VEEDNEVSSGLKQNYDEMSPAGQISKEELQH--EFDLLKKENEQRKRKLQAALINRK 1003
Score = 31.2 bits (69), Expect = 3.8
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 49 QEVNHAVEETSHQALQNMPKVLRDVEALKQEASF----LKEQMILVKEDIKKFEQDTSQS 104
+ + H VE Q Q + LR EA K+E +++M +KE ++KF + Q
Sbjct: 1630 ERIQHVVEAV-RQEKQELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQQK 1688
Query: 105 -MQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMM 163
+++ E D++++ + A ++ +E + + LS++ + + + + L+ SLM
Sbjct: 1689 ILELEEENDRLRAEVHPAGDTAKECME-TLLSSNASMKEELERVKMEYETLSKKFQSLMS 1747
Query: 164 LVDTPDYSEKCVHLEALKNRLEALASPQIVAAFTSQAVDQSKV 206
D+ SE+ ++ LK+++E S Q T + +Q+ V
Sbjct: 1748 EKDS--LSEE---VQDLKHQIEGNVSKQANLEATEKHDNQTNV 1785
>gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.59
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 27 EAASGKADGHAATLVMKLQLFIQEVNHAVEE--TSHQALQNMPKVL----RDVEALKQEA 80
E A+ KA+ A+L ++QL +E++ A E T+ Q L+ K R ++ ++ A
Sbjct: 75 EEAAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRA 134
Query: 81 SFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWSTLS----A 136
+E+M + + +K+ + + + + ++V ++ + L+ A++ + LS A
Sbjct: 135 QKDEEKMEIQEIQLKEAKHIAEDADR---KYEEVARKLVIIESDLERAEERAELSEGKCA 191
Query: 137 DIEETFKT 144
++EE KT
Sbjct: 192 ELEEELKT 199
>gi|56788377 nucleoporin like 1 isoform b [Homo sapiens]
Length = 587
Score = 33.9 bits (76), Expect = 0.59
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 41 VMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQD 100
V LQ F++E EE S + + M KV D++ALKQ S + +I K + +
Sbjct: 243 VENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIE 302
Query: 101 TSQSMQ 106
T+Q ++
Sbjct: 303 TAQELK 308
>gi|30102928 nucleoporin like 1 isoform a [Homo sapiens]
Length = 599
Score = 33.9 bits (76), Expect = 0.59
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 41 VMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQD 100
V LQ F++E EE S + + M KV D++ALKQ S + +I K + +
Sbjct: 255 VENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIE 314
Query: 101 TSQSMQ 106
T+Q ++
Sbjct: 315 TAQELK 320
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 33.9 bits (76), Expect = 0.59
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 71 RDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLV-EIDQVKSRMQLAAESLQEA- 128
+++E +KQ LK QM L+K+ +K + S S+Q V E+ ++ MQ+ A+S +A
Sbjct: 911 QNIERMKQIEKELK-QMELIKDQYQKKNYEQSLSIQRFVCEMTNLQKEMQMLAKSQYDAS 969
Query: 129 --DKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLE- 185
+K L + E + + ++N L +T + +KC EA +N L+
Sbjct: 970 VRNKQQELHLEAERKIRQE-----------LENRCQELEETVRHLKKC--KEATENTLKE 1016
Query: 186 -ALASPQIVA 194
++ S QI A
Sbjct: 1017 ASVESEQITA 1026
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 33.9 bits (76), Expect = 0.59
Identities = 24/122 (19%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 72 DVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQE---A 128
D + L ++ L E++ +++DI+ E++ +QVL E + + + E L+ +
Sbjct: 1532 DFQCLSKKKEKLTEELQKLQKDIEMAERNEDHHLQVLKESEVLLQAKRAELEKLKSQVTS 1591
Query: 129 DKWSTLSADIEETFKTQDIAVISAKLTGMQNSLM--MLVDTPDYSEKCVHLEALKNRLEA 186
+ D + K +++ ++ + + L + + + +EKC H+ +K+ LE
Sbjct: 1592 QQQEMAVLDRQLGHKKEELHLLQGSMVQAKADLQEALRLGETEVTEKCNHIREVKSLLEE 1651
Query: 187 LA 188
L+
Sbjct: 1652 LS 1653
Score = 30.4 bits (67), Expect = 6.5
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 20/123 (16%)
Query: 12 DVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSHQALQNMPKVLR 71
D+ EW N F KE + + +Q + + +EE + +Q R
Sbjct: 1907 DISEWANR-FEDCQKEEETKQQQ-------------LQVLQNEIEENKLKLVQQEMMFQR 1952
Query: 72 DVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAE---SLQEA 128
+ + E S L+ + +KE + E++ + ++DQV S++ A E +LQE
Sbjct: 1953 LQKERESEESKLETSKVTLKEQQHQLEKELTDQKS---KLDQVLSKVLAAEERVRTLQEE 2009
Query: 129 DKW 131
++W
Sbjct: 2010 ERW 2012
>gi|40354195 keratin 18 [Homo sapiens]
Length = 430
Score = 33.5 bits (75), Expect = 0.77
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 1 MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSH 60
+D ++ ADDF VK A R + G T + +LQL ET
Sbjct: 154 IDNARLAADDFRVKYETELAMRQSVENDIHGLRKVIDDTNITRLQL----------ET-- 201
Query: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSR--- 117
++EALK+E F+K+ +E++K + + S + VE+D KS+
Sbjct: 202 -----------EIEALKEELLFMKKNH---EEEVKGLQAQIASS-GLTVEVDAPKSQDLA 246
Query: 118 ----------MQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDT 167
+LA ++ +E DK+ S IEE+ T + SA++ + +L L T
Sbjct: 247 KIMADIRAQYDELARKNREELDKY--WSQQIEES--TTVVTTQSAEVGAAETTLTELRRT 302
Query: 168 PDYSEKCVHLEALKNRLEALASP--QIVAAFTSQAVDQSKVFVKVFTEI 214
E + L++++N +L + ++ A + Q + + + + +E+
Sbjct: 303 VQSLE--IDLDSMRNLKASLENSLREVEARYALQMEQLNGILLHLESEL 349
>gi|4557888 keratin 18 [Homo sapiens]
Length = 430
Score = 33.5 bits (75), Expect = 0.77
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 1 MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSH 60
+D ++ ADDF VK A R + G T + +LQL ET
Sbjct: 154 IDNARLAADDFRVKYETELAMRQSVENDIHGLRKVIDDTNITRLQL----------ET-- 201
Query: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSR--- 117
++EALK+E F+K+ +E++K + + S + VE+D KS+
Sbjct: 202 -----------EIEALKEELLFMKKNH---EEEVKGLQAQIASS-GLTVEVDAPKSQDLA 246
Query: 118 ----------MQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDT 167
+LA ++ +E DK+ S IEE+ T + SA++ + +L L T
Sbjct: 247 KIMADIRAQYDELARKNREELDKY--WSQQIEES--TTVVTTQSAEVGAAETTLTELRRT 302
Query: 168 PDYSEKCVHLEALKNRLEALASP--QIVAAFTSQAVDQSKVFVKVFTEI 214
E + L++++N +L + ++ A + Q + + + + +E+
Sbjct: 303 VQSLE--IDLDSMRNLKASLENSLREVEARYALQMEQLNGILLHLESEL 349
>gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens]
Length = 247
Score = 33.5 bits (75), Expect = 0.77
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 24/173 (13%)
Query: 32 KADGHAATLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVK 91
+A AT + KL+ E A +E+ + L+D E ++ + LKE + +
Sbjct: 65 RAQERLATALQKLE----EAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE 120
Query: 92 EDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQE------------------ADKWST 133
E +K+E+ + + + ++++ + R +LA E A+K+S
Sbjct: 121 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ 180
Query: 134 LSADIEETFK--TQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRL 184
EE K T + + + S+ L T D E+ ++ + +NRL
Sbjct: 181 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRL 233
Score = 30.0 bits (66), Expect = 8.5
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 47/200 (23%)
Query: 43 KLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTS 102
K+Q+ Q+ + A EE + + + + R E + E + L ++ LV+E
Sbjct: 13 KIQVLQQQADDA-EERAERLQREVEGERRAREQAEAEVASLNRRIQLVEE---------- 61
Query: 103 QSMQVLVEIDQVKSRMQLAAESLQEADKWSTLS-----------ADIEETFKTQDIAV-- 149
E+D+ + R+ A + L+EA+K + S EE + Q+I +
Sbjct: 62 -------ELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKE 114
Query: 150 --------------ISAKLTGMQNSLMMLVDTPDYSE-KCVHL-EALKNRLEALASPQIV 193
++ KL ++ L + + +E KC L E LKN L S +
Sbjct: 115 AKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQ 174
Query: 194 AAFTSQAVDQSKVFVKVFTE 213
A SQ D+ + +K+ T+
Sbjct: 175 AEKYSQKEDKYEEEIKILTD 194
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 33.5 bits (75), Expect = 0.77
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 76 LKQEASFLKEQMILVKEDIKKFEQDTSQSMQ--------VLVEIDQVKSRMQLAAESLQE 127
+K E + K ++I KE++KK E ++ +Q ++ + ++K + + +
Sbjct: 680 IKAELAKTKGELIKTKEELKKRENESDSLIQELETSNKKIITQNQRIKELINIIDQKEDT 739
Query: 128 ADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSE 172
+++ L + +E TFK D A S+ + + V+ P S+
Sbjct: 740 INEFQNLKSHMENTFKCNDKADTSSLIINNKLICNETVEVPKDSK 784
>gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens]
Length = 247
Score = 33.1 bits (74), Expect = 1.0
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 24/173 (13%)
Query: 32 KADGHAATLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVK 91
+A AT + KL+ E A +E+ + L+D E ++ + LKE + +
Sbjct: 65 RAQERLATALQKLE----EAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE 120
Query: 92 EDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEAD------------------KWST 133
E +K+E+ + + + ++++ + R +LA +E D K+S
Sbjct: 121 EADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQ 180
Query: 134 LSADIEETFK--TQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRL 184
EE K T + + + S+ L T D E+ ++ + +NRL
Sbjct: 181 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRL 233
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 33.1 bits (74), Expect = 1.0
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 31/240 (12%)
Query: 42 MKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDT 101
+K +L + EV EET+ + Q + V R V +EA+ +Q+ +++ Q
Sbjct: 938 VKARLALLEVQ---EETARREKQQLLDVQRQVALKSEEATATHQQLEEAQKEHTHLLQSN 994
Query: 102 SQSMQVLVEIDQVKSRMQ-----LAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTG 156
Q ++L E+ K +++ L A+S Q +S+L A+ + K Q + ++T
Sbjct: 995 QQLREILDELQARKLKLESQVDLLQAQSQQLQKHFSSLEAEAQ---KKQHLL---REVTV 1048
Query: 157 MQNSLMMLVDTPDYSEKCVHLEALKNRLEALASPQIVAAFTSQAVDQSKVFVKVFTEIDR 216
+N + + E +H+E L+ L + ++ S ++ QSK + +D
Sbjct: 1049 EEN------NASPHFEPDLHIEDLRKSLGTNQTKEV-----SSSLSQSKEDL----YLDS 1093
Query: 217 MPQLLAYY-YKCHKVQLLAAWQELCQSDLSLDRQLTGLYDALLGAWHTQIQWATQVFQKP 275
+ ++ V L +A + L Q S+ R+ T L A W ++ A +V + P
Sbjct: 1094 LSSHNVWHLLSAEGVALRSAKEFLVQQTRSMRRRQTAL-KAAQQHWRHELASAQEVAKDP 1152
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,399,147
Number of Sequences: 37866
Number of extensions: 1094730
Number of successful extensions: 3675
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 3529
Number of HSP's gapped (non-prelim): 242
length of query: 770
length of database: 18,247,518
effective HSP length: 110
effective length of query: 660
effective length of database: 14,082,258
effective search space: 9294290280
effective search space used: 9294290280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.