Search of human proteins with 239513942

Search of human proteins with 239513942

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239513942 PREDICTED: hypothetical protein [Homo sapiens]
         (300 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239513942 PREDICTED: hypothetical protein [Homo sapiens]           617   e-177
gi|239752939 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|239747479 PREDICTED: hypothetical protein XP_002347544 [Homo ...    34   0.14 
gi|239741351 PREDICTED: hypothetical protein XP_002342181 [Homo ...    34   0.14 
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]            34   0.18 
gi|123173777 keratin associated protein 5-8 [Homo sapiens]             33   0.31 
gi|70780381 bruno-like 6, RNA binding protein [Homo sapiens]           33   0.40 
gi|239757601 PREDICTED: hypothetical protein [Homo sapiens]            32   0.89 
gi|239752103 PREDICTED: hypothetical protein XP_002348112 [Homo ...    32   0.89 
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]            32   0.89 
gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo ...    32   0.89 
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]            32   0.89 
gi|116256363 transmembrane protease, serine 13 [Homo sapiens]          32   0.89 
gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]            31   1.5  
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]           31   1.5  
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]           31   1.5  
gi|109452608 chromosome 14 open reading frame 140 isoform b [Hom...    31   1.5  
gi|109452611 chromosome 14 open reading frame 140 isoform a [Hom...    31   1.5  
gi|31542493 D site of albumin promoter (albumin D-box) binding p...    30   2.0  
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     30   2.0  
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    30   2.0  
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre...    30   2.0  
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre...    30   2.0  
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    30   2.0  
gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]            30   2.6  
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            30   2.6  
gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo ...    30   2.6  
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...    30   2.6  
gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo ...    30   2.6  
gi|167614488 TBC1 domain family, member 10B [Homo sapiens]             30   2.6  

>gi|239513942 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 300

 Score =  617 bits (1591), Expect = e-177
 Identities = 300/300 (100%), Positives = 300/300 (100%)

Query: 1   MASGSPPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSS 60
           MASGSPPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSS
Sbjct: 1   MASGSPPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSS 60

Query: 61  LARARSLKSRCSSSCCRQLWLEPSARGGRQDPSASRCCCWHFWACSRARRSDQAEKDSGS 120
           LARARSLKSRCSSSCCRQLWLEPSARGGRQDPSASRCCCWHFWACSRARRSDQAEKDSGS
Sbjct: 61  LARARSLKSRCSSSCCRQLWLEPSARGGRQDPSASRCCCWHFWACSRARRSDQAEKDSGS 120

Query: 121 WVSWEASPLTLELLSPFPLLGGIIFFLLFSRIPGGLTIWALAGSSMQCRVPMAVLVGRVS 180
           WVSWEASPLTLELLSPFPLLGGIIFFLLFSRIPGGLTIWALAGSSMQCRVPMAVLVGRVS
Sbjct: 121 WVSWEASPLTLELLSPFPLLGGIIFFLLFSRIPGGLTIWALAGSSMQCRVPMAVLVGRVS 180

Query: 181 PEPKQQAQGRGIVAGTGPVQWWGLPSIYIEAWVSLEEGLGPDQPSCRQVTTKATFSALAA 240
           PEPKQQAQGRGIVAGTGPVQWWGLPSIYIEAWVSLEEGLGPDQPSCRQVTTKATFSALAA
Sbjct: 181 PEPKQQAQGRGIVAGTGPVQWWGLPSIYIEAWVSLEEGLGPDQPSCRQVTTKATFSALAA 240

Query: 241 GSGGHGTLGLGKEKRQHTPRAVGPRPVFKKLGDGRREGRRHSRLEEMAQAETLVEDGSEL 300
           GSGGHGTLGLGKEKRQHTPRAVGPRPVFKKLGDGRREGRRHSRLEEMAQAETLVEDGSEL
Sbjct: 241 GSGGHGTLGLGKEKRQHTPRAVGPRPVFKKLGDGRREGRRHSRLEEMAQAETLVEDGSEL 300


>gi|239752939 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 310

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 35  ALVGLGSRSPR-ASCALLARLSRSSSSLA--RARSLKSRCSSSCCRQLWLEPSARGGRQD 91
           A  G GS  PR ASC   +  SRSSS+ A   +RS  SR  +S  R     PS R  R  
Sbjct: 189 ASAGSGSVWPRAASCLRASSASRSSSARACSLSRSRASRLPASVARS---SPSRRQRRSS 245

Query: 92  PSASRCCCWHFWACSRARRSDQAEKDSGSWVSWEASP 128
             +S CC      CS A         +G+  +  ASP
Sbjct: 246 SCSSACC-----RCSNASSVACFSGATGAAPALPASP 277


>gi|239747479 PREDICTED: hypothetical protein XP_002347544 [Homo
           sapiens]
          Length = 310

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 35  ALVGLGSRSPR-ASCALLARLSRSSSSLA--RARSLKSRCSSSCCRQLWLEPSARGGRQD 91
           A  G GS  PR ASC   +  SRSSS+ A   +RS  SR  +S  R     PS R  R  
Sbjct: 189 ASAGSGSVWPRAASCLRASSASRSSSARACSLSRSRASRLPASVARS---SPSRRQRRSS 245

Query: 92  PSASRCCCWHFWACSRARRSDQAEKDSGSWVSWEASP 128
             +S CC      CS A         +G+  +  ASP
Sbjct: 246 SCSSACC-----RCSNASSVACFSGATGAAPALPASP 277


>gi|239741351 PREDICTED: hypothetical protein XP_002342181 [Homo
           sapiens]
          Length = 310

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 35  ALVGLGSRSPR-ASCALLARLSRSSSSLA--RARSLKSRCSSSCCRQLWLEPSARGGRQD 91
           A  G GS  PR ASC   +  SRSSS+ A   +RS  SR  +S  R     PS R  R  
Sbjct: 189 ASAGSGSVWPRAASCLRASSASRSSSARACSLSRSRASRLPASVARS---SPSRRQRRSS 245

Query: 92  PSASRCCCWHFWACSRARRSDQAEKDSGSWVSWEASP 128
             +S CC      CS A         +G+  +  ASP
Sbjct: 246 SCSSACC-----RCSNASSVACFSGATGAAPALPASP 277


>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 316

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 37/140 (26%), Positives = 48/140 (34%), Gaps = 31/140 (22%)

Query: 1   MASGSPPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSS 60
           ++S S   G   G++  R     P   G  + GP   G G       C    R  R   +
Sbjct: 56  LSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGR-GRFPCA 114

Query: 61  LARARSLKSR-CSS-SCCRQLWLEPSARGGRQDPSASRCCCWHFWACSRARRSDQAEKDS 118
            +  R  +SR C S SCCR                 S  C WH W   R R +D      
Sbjct: 115 GSGGRGARSRGCHSPSCCR-----------------SSSCAWHRWPQLRGREADP----- 152

Query: 119 GSWVSWEASPLTLELLSPFP 138
                  ASP  L  ++P P
Sbjct: 153 ------RASPALLICIAPRP 166


>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
          Length = 187

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 26  PLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQLWLEPSA 85
           P  CSS      G GS   ++SC    +   S SS  +  S  S C SSCC+    +P  
Sbjct: 93  PCCCSS------GCGSSCCQSSCC---KPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCC 143

Query: 86  RGGRQDPSASRCCC 99
               Q      CCC
Sbjct: 144 ---SQSSCCKPCCC 154



 Score = 29.6 bits (65), Expect = 3.4
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 16/73 (21%)

Query: 26  PLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQLWLEPSA 85
           P  CSS      G GS   ++SC    +   S SS  +     S C SSCC+    +P  
Sbjct: 122 PCSCSS------GCGSSCCQSSCC---KPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCC 172

Query: 86  RGGRQDPSASRCC 98
                  S S CC
Sbjct: 173 -------SQSSCC 178


>gi|70780381 bruno-like 6, RNA binding protein [Homo sapiens]
          Length = 481

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 5/33 (15%)

Query: 2   ASGSPPPGQGQGTSPNRQRLPLPAPLGCSSLGP 34
           A+ + PPG G GT P      LPAP+G +  GP
Sbjct: 293 AAANSPPGSGPGTLPG-----LPAPIGVNGFGP 320


>gi|239757601 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 20  RLPLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQL 79
           RL L     C S GP      +R+ R S +L A +SR ++   + R+L   CS S     
Sbjct: 85  RLWLSGKATCCSPGPPNCSSATRALRGSSSLRASVSRRATCSTKRRALWKFCSPSRS--- 141

Query: 80  WLEPSARGGRQDPSASRC 97
             EPS+   R+  S  RC
Sbjct: 142 --EPSS---RKTMSTGRC 154


>gi|239752103 PREDICTED: hypothetical protein XP_002348112 [Homo
           sapiens]
          Length = 308

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 20  RLPLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQL 79
           RL L     C S GP      +R+ R S +L A +SR ++   + R+L   CS S     
Sbjct: 85  RLWLSGKATCCSPGPPNCSSATRALRGSSSLRASVSRRATCSTKRRALWKFCSPSRS--- 141

Query: 80  WLEPSARGGRQDPSASRC 97
             EPS+   R+  S  RC
Sbjct: 142 --EPSS---RKTMSTGRC 154


>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 11/129 (8%)

Query: 8   PGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRASCALL-ARL-SRSSSSLARAR 65
           PG+ Q     R+R  +        L    VG   ++P+A  A L ARL SR + S A A 
Sbjct: 422 PGRHQAAVLRRRRARVAR---AQQLARLRVGHAVQAPQALQAQLHARLPSRRARSSAPAP 478

Query: 66  SLKSRCSSSCCRQLWLEPSA--RGGRQDPSASRCCCWHFWACSRARR--SDQAEKDSGSW 121
           S + RC +     +    +A  RG R  P+AS       W  S  RR   D  E D    
Sbjct: 479 SAQGRCMTPARSPVAAREAARLRGARPGPAAS--AATRMWQGSGRRRPGPDPQELDPHCK 536

Query: 122 VSWEASPLT 130
           +S+   PLT
Sbjct: 537 LSFPRLPLT 545


>gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo
           sapiens]
          Length = 452

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 20  RLPLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQL 79
           RL L     C S GP      +R+ R S +L A +SR ++   + R+L   CS S     
Sbjct: 85  RLWLSGKATCCSPGPPNCSSATRALRGSSSLRASVSRRATCSTKRRALWKFCSPSRS--- 141

Query: 80  WLEPSARGGRQDPSASRC 97
             EPS+   R+  S  RC
Sbjct: 142 --EPSS---RKTMSTGRC 154


>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 737

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 11/129 (8%)

Query: 8   PGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRASCALL-ARL-SRSSSSLARAR 65
           PG+ Q     R+R  +        L    VG   ++P+A  A L ARL SR + S A A 
Sbjct: 422 PGRHQAAVLRRRRARVAR---AQQLARLRVGHAVQAPQALQAQLHARLPSRRARSSAPAP 478

Query: 66  SLKSRCSSSCCRQLWLEPSA--RGGRQDPSASRCCCWHFWACSRARR--SDQAEKDSGSW 121
           S + RC +     +    +A  RG R  P+AS       W  S  RR   D  E D    
Sbjct: 479 SAQGRCMTPARSPVAAREAARLRGARPGPAAS--AATRMWQGSGRRRPGPDPQELDPHCK 536

Query: 122 VSWEASPLT 130
           +S+   PLT
Sbjct: 537 LSFPRLPLT 545


>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
          Length = 567

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 29/76 (38%), Positives = 33/76 (43%), Gaps = 10/76 (13%)

Query: 2   ASGSPPPGQGQGTSPNR----QRLPLPAPLGCSSLG---PALVGLGSRSPRASCALLARL 54
           A  SP      GT P R    Q  P   P G +S G   PA       SP  +   LA L
Sbjct: 37  AQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRASPAQASPAQASPARASPALASL 96

Query: 55  SRSS---SSLARARSL 67
           SRSS   SS AR+ S+
Sbjct: 97  SRSSSGRSSSARSASV 112


>gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 327

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 221 PDQPSCRQVTTKATFSALAAGSGGHGTLG--LGKEKRQHTPRAVGPR-PVFKKLGDGRRE 277
           P  P  R V  +A    + +G G HG LG   G  K +  PR   PR P    LG  +  
Sbjct: 87  PSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEP 146

Query: 278 GRRHSRLEE 286
           G+   + EE
Sbjct: 147 GQVEGQEEE 155


>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
          Length = 330

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 251 GKEKRQHTPRAVGPRPVFKKLGDGRREGRRHSRLEEMAQAETLVEDGSE 299
           G++K+++  +AVGP  + K++ D   EG      E++++ + L ED  E
Sbjct: 128 GRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYK-LDEDEDE 175


>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
          Length = 320

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 251 GKEKRQHTPRAVGPRPVFKKLGDGRREGRRHSRLEEMAQAETLVEDGSE 299
           G++K+++  +AVGP  + K++ D   EG      E++++ + L ED  E
Sbjct: 128 GRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYK-LDEDEDE 175


>gi|109452608 chromosome 14 open reading frame 140 isoform b [Homo
           sapiens]
          Length = 275

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 159 WALAGSSMQCRVPMAVLVGRVSPEPKQQAQGRGIVAGTGPVQWWGLPSIYIEAWVSL-EE 217
           W     +     P    + +  PE   Q QG G+   +GP  W+  P    + ++   ++
Sbjct: 74  WNTQTKARSYSYPHCTGISQQDPESDSQGQGNGLFYSSGPQSWY--PKANNQDFIPFTKK 131

Query: 218 GLGPDQ--PSCRQVTTKATFSALAAGSGGHGTLGLGKEKRQHTPRAVGPR 265
            +G D+  P    V  K+  +  A   G H       E R+ + R  G R
Sbjct: 132 RVGVDRAFPLKPMVHRKSCSTGEAGTDGDHNVYPRPPEPREFSSRNFGVR 181


>gi|109452611 chromosome 14 open reading frame 140 isoform a [Homo
           sapiens]
          Length = 456

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 159 WALAGSSMQCRVPMAVLVGRVSPEPKQQAQGRGIVAGTGPVQWWGLPSIYIEAWVSL-EE 217
           W     +     P    + +  PE   Q QG G+   +GP  W+  P    + ++   ++
Sbjct: 74  WNTQTKARSYSYPHCTGISQQDPESDSQGQGNGLFYSSGPQSWY--PKANNQDFIPFTKK 131

Query: 218 GLGPDQ--PSCRQVTTKATFSALAAGSGGHGTLGLGKEKRQHTPRAVGPR 265
            +G D+  P    V  K+  +  A   G H       E R+ + R  G R
Sbjct: 132 RVGVDRAFPLKPMVHRKSCSTGEAGTDGDHNVYPRPPEPREFSSRNFGVR 181


>gi|31542493 D site of albumin promoter (albumin D-box) binding
           protein [Homo sapiens]
          Length = 325

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 8/43 (18%)

Query: 5   SPPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRAS 47
           SPPP  G    P+  R P P+P      GP     GS SPR+S
Sbjct: 131 SPPPPGGPSPEPSPARTPAPSP------GPG--SCGSASPRSS 165


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 6   PPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRA 46
           PPPG+ QG  P     P   P      GP   G  SRSPR+
Sbjct: 73  PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS 113


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
          preproprotein [Homo sapiens]
          Length = 331

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 6  PPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRA 46
          PPPG+ QG  P     P   P      GP   G  SRSPR+
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS 92



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 6   PPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRA 46
           PPPG+ QG  P     P   P      GP   G  SRSPR+
Sbjct: 113 PPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRS 153


>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
          preproprotein [Homo sapiens]
          Length = 178

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 6  PPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRA 46
          PPPG+ QG  P     P   P      GP   G  SRSPR+
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS 92


>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
          preproprotein [Homo sapiens]
          Length = 198

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 6  PPPGQGQGTSPNRQRLPLPAPLGCSSLGPALVGLGSRSPRA 46
          PPPG+ QG  P     P   P      GP   G  SRSPR+
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS 92


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/55 (36%), Positives = 27/55 (49%)

Query: 41   SRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQLWLEPSARGGRQDPSAS 95
            S S R+SC+  +  S SSSS + +RS  S  SSS C       S+       S+S
Sbjct: 2136 SDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSS 2190


>gi|239756098 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 22  PLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQLWL 81
           P P+ + C   G    G    S R SC+ L   S SSS +  +R L  R SSS   + + 
Sbjct: 109 PSPSSVSCCFQGSEPRGTSCGSRRISCSSLTICSYSSSFM-ESRPLSWRSSSS---RSFF 164

Query: 82  EPSARGGRQDPSASRCCCWHFWACSRAR 109
            PS RG     S  R   W+    S  R
Sbjct: 165 SPS-RGPSMAHSWGRSAAWNMARTSCGR 191


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 16  PNRQRLPLPAPLGCSSLGPALVGLGSRSPRA----SCALLARLSRSSSSLARARSLKSRC 71
           P  +  P  A  GCSS G    G G  SPRA    + A LA    +    +R+  +  R 
Sbjct: 142 PAPRLCPQRASPGCSSPGVRGPG-GGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200

Query: 72  SSSCCRQLWLEPSARGGRQ 90
           ++  C QL   P   G R+
Sbjct: 201 AALACAQLPRRPRGAGARR 219


>gi|239750629 PREDICTED: hypothetical protein XP_002347479 [Homo
           sapiens]
          Length = 271

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 22  PLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQLWL 81
           P P+ + C   G    G    S R SC+ L   S SSS +  +R L  R SSS   + + 
Sbjct: 120 PSPSSVSCCFQGSEPRGTSCGSRRISCSSLTICSYSSSFM-ESRPLSWRSSSS---RSFF 175

Query: 82  EPSARGGRQDPSASRCCCWHFWACSRAR 109
            PS RG     S  R   W+    S  R
Sbjct: 176 SPS-RGPSMAHSWGRSAAWNMARTSCGR 202


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 16  PNRQRLPLPAPLGCSSLGPALVGLGSRSPRA----SCALLARLSRSSSSLARARSLKSRC 71
           P  +  P  A  GCSS G    G G  SPRA    + A LA    +    +R+  +  R 
Sbjct: 142 PAPRLCPQRASPGCSSPGVRGPG-GGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200

Query: 72  SSSCCRQLWLEPSARGGRQ 90
           ++  C QL   P   G R+
Sbjct: 201 AALACAQLPRRPRGAGARR 219


>gi|239744936 PREDICTED: hypothetical protein XP_002343312 [Homo
           sapiens]
          Length = 271

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 22  PLPAPLGCSSLGPALVGLGSRSPRASCALLARLSRSSSSLARARSLKSRCSSSCCRQLWL 81
           P P+ + C   G    G    S R SC+ L   S SSS +  +R L  R SSS   + + 
Sbjct: 120 PSPSSVSCCFQGSEPRGTSCGSRRISCSSLTICSYSSSFM-ESRPLSWRSSSS---RSFF 175

Query: 82  EPSARGGRQDPSASRCCCWHFWACSRAR 109
            PS RG     S  R   W+    S  R
Sbjct: 176 SPS-RGPSMAHSWGRSAAWNMARTSCGR 202


>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
          Length = 808

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 163 GSSMQCRVPMAVLVGRVSPEPKQQAQGRGIVAGTGP 198
           G S  C  P+AV+    +PEP + +Q  G  +  GP
Sbjct: 219 GPSGTCEAPVAVVTVTPAPEPAENSQDLGSTSSLGP 254


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,571,029
Number of Sequences: 37866
Number of extensions: 791369
Number of successful extensions: 3183
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 3094
Number of HSP's gapped (non-prelim): 119
length of query: 300
length of database: 18,247,518
effective HSP length: 102
effective length of query: 198
effective length of database: 14,385,186
effective search space: 2848266828
effective search space used: 2848266828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.