Guide to the Human Genome
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Search of human proteins with 239509108

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239509108 PREDICTED: hypothetical protein [Homo sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749315 PREDICTED: hypothetical protein [Homo sapiens]           298   8e-82
gi|239509108 PREDICTED: hypothetical protein [Homo sapiens]           298   8e-82
gi|239754766 PREDICTED: hypothetical protein [Homo sapiens]           268   1e-72
gi|169171033 PREDICTED: hypothetical protein [Homo sapiens]           268   1e-72
gi|124378039 SEC16 homolog A [Homo sapiens]                            33   0.066
gi|42476272 zinc finger protein 513 [Homo sapiens]                     33   0.086
gi|42821112 serine/threonine protein kinase pim-2 [Homo sapiens]       31   0.33 
gi|154146231 DMRT-like family A2 [Homo sapiens]                        31   0.33 
gi|156415988 zinc finger and BTB domain containing 7B [Homo sapi...    30   0.95 
gi|239752951 PREDICTED: similar to kruppel-related zinc finger p...    30   0.95 
gi|239752949 PREDICTED: similar to kruppel-related zinc finger p...    30   0.95 
gi|239752947 PREDICTED: similar to kruppel-related zinc finger p...    30   0.95 
gi|239751870 PREDICTED: hypothetical protein XP_002348033 [Homo ...    30   0.95 
gi|239746361 PREDICTED: hypothetical protein XP_002343736 [Homo ...    30   0.95 
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ...    29   1.6  
gi|194097365 FtsJ homolog 3 [Homo sapiens]                             28   2.8  
gi|4504713 insulinoma-associated 1 [Homo sapiens]                      28   3.6  
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  27   4.7  
gi|239756297 PREDICTED: hypothetical protein [Homo sapiens]            27   4.7  
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ...    27   4.7  
gi|239745228 PREDICTED: hypothetical protein XP_002343392 [Homo ...    27   4.7  
gi|83320070 gasdermin D [Homo sapiens]                                 27   4.7  
gi|32455248 phosphoinositide-3-kinase, regulatory subunit 1 (alp...    27   6.1  
gi|83779014 katanin p80 subunit B 1 [Homo sapiens]                     27   6.1  
gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo ...    27   6.1  
gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo s...    27   6.1  
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    27   6.1  
gi|88759339 aster-associated protein [Homo sapiens]                    27   6.1  
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]           27   6.1  
gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo ...    27   8.0  

>gi|239749315 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 147

 Score =  298 bits (764), Expect = 8e-82
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 60
           MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP
Sbjct: 1   MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 60

Query: 61  NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 120
           NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG
Sbjct: 61  NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 120

Query: 121 RKDFWKHILLIATLSLCVKAVFNTGVC 147
           RKDFWKHILLIATLSLCVKAVFNTGVC
Sbjct: 121 RKDFWKHILLIATLSLCVKAVFNTGVC 147


>gi|239509108 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 147

 Score =  298 bits (764), Expect = 8e-82
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 60
           MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP
Sbjct: 1   MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 60

Query: 61  NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 120
           NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG
Sbjct: 61  NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 120

Query: 121 RKDFWKHILLIATLSLCVKAVFNTGVC 147
           RKDFWKHILLIATLSLCVKAVFNTGVC
Sbjct: 121 RKDFWKHILLIATLSLCVKAVFNTGVC 147


>gi|239754766 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 359

 Score =  268 bits (685), Expect = 1e-72
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 60
           MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP
Sbjct: 228 MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 287

Query: 61  NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 120
           NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG
Sbjct: 288 NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 347

Query: 121 RKDFWKHILLIA 132
           RKDFWKHILLIA
Sbjct: 348 RKDFWKHILLIA 359


>gi|169171033 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 359

 Score =  268 bits (685), Expect = 1e-72
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 60
           MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP
Sbjct: 228 MAATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 287

Query: 61  NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 120
           NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG
Sbjct: 288 NCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRTPTQTG 347

Query: 121 RKDFWKHILLIA 132
           RKDFWKHILLIA
Sbjct: 348 RKDFWKHILLIA 359


>gi|124378039 SEC16 homolog A [Homo sapiens]
          Length = 2357

 Score = 33.5 bits (75), Expect = 0.066
 Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 12/91 (13%)

Query: 2    AATRSQA---PTPEPRAILTLCSLPGSGLQSSSP-SQEDASLSEQNDLLFPDLEMHAPAS 57
            AA R  A   P PEP+ + +  SLPGS L SS P   +   LS  + +     E+    +
Sbjct: 2249 AAARGLANPEPAPEPKVLSSAASLPGSELPSSRPEGSQGGELSRCSSMSSLSREVSQHFN 2308

Query: 58   MLPNCCAFRRDLVHPKAAWPAPGSSPALLPA 88
              P       DL  P A  P  G+ P   PA
Sbjct: 2309 QAPG------DL--PAAGGPPSGAMPFYNPA 2331


>gi|42476272 zinc finger protein 513 [Homo sapiens]
          Length = 541

 Score = 33.1 bits (74), Expect = 0.086
 Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 4   TRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQND-LLFPDLEMHAP---ASML 59
           T +  PTP        C  P      S   QE A      D LL PDL +H P   AS L
Sbjct: 227 THAGPPTPPCPTCGFRCCTPRPARPPSPTEQEGAVPRRPEDALLLPDLSLHVPPGGASFL 286

Query: 60  PNCCAFR 66
           P+C   R
Sbjct: 287 PDCGQLR 293


>gi|42821112 serine/threonine protein kinase pim-2 [Homo sapiens]
          Length = 311

 Score = 31.2 bits (69), Expect = 0.33
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%)

Query: 49  DLEMHAPASMLPNCCAFRRDLVHPKAAWPAPGSSPAL 85
           + E+H PA + P+CCA  R  + PK     P S P+L
Sbjct: 246 EAELHFPAHVSPDCCALIRRCLAPK-----PSSRPSL 277


>gi|154146231 DMRT-like family A2 [Homo sapiens]
          Length = 542

 Score = 31.2 bits (69), Expect = 0.33
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 11/121 (9%)

Query: 8   APTPEPRAILTLCSLPG-----SGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLPNC 62
           A  P  R +L     PG     S   + SP Q +AS    +   +P   + AP  + P  
Sbjct: 411 AAPPHHRPLLAGAMAPGALGSLSSRSAFSPLQPNASHFGADAGAYP---LGAPLGLSPLR 467

Query: 63  CAFRRDLVHPKA-AWPAPGSSPALLPAVGVRSPV-LCFLALQEARDARLLISL-RTPTQT 119
            A+     H +  A+ AP S+  L+P +G R P+   F  L   R A    ++ + PT  
Sbjct: 468 LAYSAAAAHSRGLAFMAPYSTAGLVPTLGFRPPMDYAFSDLMRDRSAAAAAAVHKEPTYG 527

Query: 120 G 120
           G
Sbjct: 528 G 528


>gi|156415988 zinc finger and BTB domain containing 7B [Homo
           sapiens]
          Length = 539

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 1   MAATRSQAPTPEPRAILTLCS--LPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASM 58
           M A    A   E   ++  C   L GSGL++ SP ++D   + Q    + +    A AS 
Sbjct: 118 MPAVLQAARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQ----YLEAFATATASG 173

Query: 59  LPNCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRT 115
           +PN      +   P+   P P   P    A   R P   FL  + AR   L+  + T
Sbjct: 174 VPN-----GEDSPPQVPLPPPPPPPPRPVARRSRKPRKAFLQTKGARANHLVPEVPT 225


>gi|239752951 PREDICTED: similar to kruppel-related zinc finger
           protein hcKrox isoform 3 [Homo sapiens]
          Length = 573

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 1   MAATRSQAPTPEPRAILTLCS--LPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASM 58
           M A    A   E   ++  C   L GSGL++ SP ++D   + Q    + +    A AS 
Sbjct: 152 MPAVLQAARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQ----YLEAFATATASG 207

Query: 59  LPNCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRT 115
           +PN      +   P+   P P   P    A   R P   FL  + AR   L+  + T
Sbjct: 208 VPN-----GEDSPPQVPLPPPPPPPPRPVARRSRKPRKAFLQTKGARANHLVPEVPT 259


>gi|239752949 PREDICTED: similar to kruppel-related zinc finger
           protein hcKrox isoform 1 [Homo sapiens]
          Length = 539

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 1   MAATRSQAPTPEPRAILTLCS--LPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASM 58
           M A    A   E   ++  C   L GSGL++ SP ++D   + Q    + +    A AS 
Sbjct: 118 MPAVLQAARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQ----YLEAFATATASG 173

Query: 59  LPNCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRT 115
           +PN      +   P+   P P   P    A   R P   FL  + AR   L+  + T
Sbjct: 174 VPN-----GEDSPPQVPLPPPPPPPPRPVARRSRKPRKAFLQTKGARANHLVPEVPT 225


>gi|239752947 PREDICTED: similar to kruppel-related zinc finger
           protein hcKrox isoform 2 [Homo sapiens]
          Length = 539

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 1   MAATRSQAPTPEPRAILTLCS--LPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASM 58
           M A    A   E   ++  C   L GSGL++ SP ++D   + Q    + +    A AS 
Sbjct: 118 MPAVLQAARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQ----YLEAFATATASG 173

Query: 59  LPNCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLISLRT 115
           +PN      +   P+   P P   P    A   R P   FL  + AR   L+  + T
Sbjct: 174 VPN-----GEDSPPQVPLPPPPPPPPRPVARRSRKPRKAFLQTKGARANHLVPEVPT 225


>gi|239751870 PREDICTED: hypothetical protein XP_002348033 [Homo
           sapiens]
          Length = 508

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 54  APASMLPNCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDA 107
           AP+SM+       R LV P A  PAPG SP +L AV     +    A+++ RD+
Sbjct: 454 APSSMMLQAGILER-LVRPPAT-PAPGDSPMILAAVDAPIMMDRLGAMKDIRDS 505


>gi|239746361 PREDICTED: hypothetical protein XP_002343736 [Homo
           sapiens]
          Length = 508

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 54  APASMLPNCCAFRRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDA 107
           AP+SM+       R LV P A  PAPG SP +L AV     +    A+++ RD+
Sbjct: 454 APSSMMLQAGILER-LVRPPAT-PAPGDSPMILAAVDAPIMMDRLGAMKDIRDS 505


>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 [Homo
            sapiens]
          Length = 1461

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 20/112 (17%)

Query: 13   PRAILTLCSLPGSG-----------LQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLPN 61
            P +   L SL G G            +  +P  +++  S +++      E H P S L +
Sbjct: 1142 PSSASELASLGGGGSGGLTGFKTAPYKERAPQFQESVGSFRSNSFNSTFEHHLPPSPLEH 1201

Query: 62   CCAFRRDLVHPKAAWPAP---------GSSPALLPAVGVRSPVLCFLALQEA 104
               F+R+ V P +A P P           +P  LP+V + +P     AL  A
Sbjct: 1202 GTPFQREPVGPSSAPPVPPKDHGGIFSRDAPTHLPSVDLSNPFTKEAALAHA 1253


>gi|194097365 FtsJ homolog 3 [Homo sapiens]
          Length = 847

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)

Query: 14 RAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLPNCCAFRRDL 69
          RA+L LC+ PG  LQ ++     +SL    DL+        P   LPN    ++D+
Sbjct: 46 RALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLV--------PIKPLPNVVTLQQDI 93


>gi|4504713 insulinoma-associated 1 [Homo sapiens]
          Length = 510

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 2   AATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLPN 61
           A   ++AP PE  A       PG G    +PS    S S   D L+   E H  A     
Sbjct: 322 APAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESGSEDGLY---ECHHCAKKFRR 378

Query: 62  CCAFRRDLVHPKAAWPAPGSSPALLPA 88
               R+ L+    A  A G +P   PA
Sbjct: 379 QAYLRKHLLAHHQALQAKG-APLAPPA 404


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 9/55 (16%)

Query: 3   ATRSQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLS---------EQNDLLFP 48
           A    AP P P A+ TLC  P +  +   P +   SL+         E+++LL P
Sbjct: 847 AAPGPAPPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNRYAASDSEPERDELLVP 901


>gi|239756297 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 525

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 13  PRAILTLCSLPGSGLQSSSPSQEDASLSEQN 43
           P  +LT+  +  SG  S S S++DA L ++N
Sbjct: 118 PAVLLTVAVVQSSGSSSKSKSEDDAFLPQRN 148


>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
           sapiens]
          Length = 800

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 13  PRAILTLCSLPGSGLQSSSPSQEDASLSEQN 43
           P  +LT+  +  SG  S S S++DA L ++N
Sbjct: 118 PAVLLTVAVVQSSGSSSKSKSEDDAFLPQRN 148


>gi|239745228 PREDICTED: hypothetical protein XP_002343392 [Homo
           sapiens]
          Length = 488

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 13  PRAILTLCSLPGSGLQSSSPSQEDASLSEQN 43
           P  +LT+  +  SG  S S S++DA L ++N
Sbjct: 118 PAVLLTVAVVQSSGSSSKSKSEDDAFLPQRN 148


>gi|83320070 gasdermin D [Homo sapiens]
          Length = 484

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 12  EPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLPNCCAFRRDLVH 71
           E + +L    L GS L+ S+P QE +++S    LL       APA +L + C        
Sbjct: 394 ESQTLLGPLELVGSLLEQSAPWQERSTMSLPPGLLGNSWGEGAPAWVLLDECGLELGEDT 453

Query: 72  PKAAW--PAPGSSPALLPAVGVRS 93
           P   W   A G   AL  ++ + S
Sbjct: 454 PHVCWEPQAQGRMCALYASLALLS 477


>gi|32455248 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
           isoform 1 [Homo sapiens]
          Length = 724

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 9/53 (16%)

Query: 9   PTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDL-EMHAPASMLP 60
           PTP+PR    L   PG     SS ++ D    EQ  L  PDL E  AP  + P
Sbjct: 85  PTPKPRPPRPLPVAPG-----SSKTEADV---EQQALTLPDLAEQFAPPDIAP 129


>gi|83779014 katanin p80 subunit B 1 [Homo sapiens]
          Length = 655

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 5/58 (8%)

Query: 31  SPSQEDASLSEQNDLLFPDLEMHAPASMLPNCCAFRRDLVHPKAAWPAPGSSPALLPA 88
           +P ++DA+ +++     P +++  P   +PN     R  V   A+ PAP + PA++PA
Sbjct: 405 APPEDDAATAKEAAKPSPAMDVQFP---VPNLEVLPRPPV--VASTPAPKAEPAIIPA 457


>gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo
           sapiens]
          Length = 706

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)

Query: 2   AATRSQAPTPEPRAILT--LCSLPGSG-------LQSSSPSQEDASLSEQNDLLFPDLEM 52
           A +RS +P+P P +++     S PG G        + S P + D   S+ N ++  D   
Sbjct: 201 APSRSASPSP-PESLVEEERPSGPGGGGKQRADEKEPSGPYESDEDKSDYNLVVDEDQPS 259

Query: 53  HAPA------SMLPNCCAFRRDLVHPKAAWPAPGSSP 83
             P+        +P C   RRDLV   A+  +   SP
Sbjct: 260 EPPSPATTPCGKVPICIPARRDLVDSPASLASSLGSP 296


>gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo
           sapiens]
          Length = 743

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)

Query: 2   AATRSQAPTPEPRAILT--LCSLPGSG-------LQSSSPSQEDASLSEQNDLLFPDLEM 52
           A +RS +P+P P +++     S PG G        + S P + D   S+ N ++  D   
Sbjct: 187 APSRSASPSP-PESLVEEERPSGPGGGGKQRADEKEPSGPYESDEDKSDYNLVVDEDQPS 245

Query: 53  HAPA------SMLPNCCAFRRDLVHPKAAWPAPGSSP 83
             P+        +P C   RRDLV   A+  +   SP
Sbjct: 246 EPPSPATTPCGKVPICIPARRDLVDSPASLASSLGSP 282


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 23/91 (25%)

Query: 9   PTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLPNCCAFRRD 68
           P P P  +L  C  PG   + +SP+Q+               E  AP   LP   +    
Sbjct: 259 PIPPPLPLLPPCGYPGLKAEPASPAQDAQ-------------EPPAPPPPLPPYAS---- 301

Query: 69  LVHPKAAWPAP-----GSSPALLPAVGVRSP 94
              P+A+ PAP      SS    P +  +SP
Sbjct: 302 -CSPRASLPAPPLPGVNSSSETPPPLPPKSP 331


>gi|88759339 aster-associated protein [Homo sapiens]
          Length = 647

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 10/52 (19%)

Query: 9   PTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLP 60
           P+P PR++L          +  S  +E   L ++   L  +LE+H+  S LP
Sbjct: 174 PSPRPRSML----------KKKSHMEEKDGLEDKETALSEELELHSAPSSLP 215


>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
          Length = 1219

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 6   SQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDLLFPDLEMHAPASMLPNCCAF 65
           SQAP P     +T    P + L   S     +++S       P   M A A   P   A 
Sbjct: 424 SQAPQPS----VTGLQAPSAALMQVSSLDSHSAVSGNAQSFQPYAGMQAYA--YPQASAV 477

Query: 66  RRDLVHPKAAWPAPGSSPALLPAVGVRSPVLCFLALQEARDARLLIS 112
              L   +  +PAP S P      G  +  L   A Q   + R+ +S
Sbjct: 478 TSQLQPVRPLYPAPLSQPPHFQGSGDMASFLMTEARQHNTEIRMAVS 524


>gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo
           sapiens]
          Length = 485

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 6   SQAPTPEPRAILTLCSLPGSGLQSSSPSQEDASLSEQNDL 45
           S  P   P    TLCS  G+GL S+S + +  S S +N L
Sbjct: 284 SSCPRDSPS---TLCSAFGAGLVSASRAWDPPSCSHENHL 320


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.133    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,666,307
Number of Sequences: 37866
Number of extensions: 321994
Number of successful extensions: 1143
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1127
Number of HSP's gapped (non-prelim): 37
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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