Guide to the Human Genome
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Name: LOC731075 Sequence: fasta or formatted (147aa) NCBI GI: 239509108
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {359aa} PREDICTED: hypothetical protein
alt mRNA {147aa} PREDICTED: hypothetical protein
alt prot {359aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         18           2
 C cysteine            4.1          6           2
 D aspartate           4.1          6           1
 E glutamate           3.4          5           1
 F phenylalanine       3.4          5           1
 G glycine             4.1          6           1
 H histidine           2.0          3           1
 I isoleucine          2.7          4           1
 K lysine              2.7          4           1
 L leucine            15.0         22           2
 M methionine          2.0          3           1
 N asparagine          2.0          3           1
 P proline            10.2         15           1
 Q glutamine           4.1          6           1
 R arginine            6.1          9           2
 S serine             10.2         15           3
 T threonine           5.4          8           1
 V valine              4.8          7           1
 W tryptophan          1.4          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC731075             1.000   PREDICTED: hypothetical protein 
LOC731075             0.890   PREDICTED: hypothetical protein 
LOC731075             0.890   PREDICTED: hypothetical protein 
SEC16A                0.029   SEC16 homolog A 
ZNF513                0.029   zinc finger protein 513 
PIM2                  0.022   serine/threonine protein kinase pim-2 
DMRTA2                0.022   DMRT-like family A2 
ZBTB7B                0.018   zinc finger and BTB domain containing 7B 
LOC100293130          0.018   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.018   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.018   PREDICTED: similar to kruppel-related zinc finger p...
LOC100289801          0.018   PREDICTED: hypothetical protein XP_002348033 
LOC100288135          0.018   PREDICTED: hypothetical protein XP_002343736 
RPRD2                 0.015   Regulation of nuclear pre-mRNA domain containing 2 ...
FTSJ3                 0.011   FtsJ homolog 3 
INSM1                 0.011   insulinoma-associated 1 
CASKIN1               0.007   CASK interacting protein 1 
LOC100292848          0.007   PREDICTED: hypothetical protein 
LOC100289782          0.007   PREDICTED: hypothetical protein XP_002347588 
LOC100287587          0.007   PREDICTED: hypothetical protein XP_002343392 
GSDMD                 0.007   gasdermin D 
PIK3R1                0.007   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
KATNB1                0.007   katanin p80 subunit B 1 
TLE2                  0.007   transducin-like enhancer protein 2 isoform 2 
TLE2                  0.007   transducin-like enhancer protein 2 isoform 1 
WIPF3                 0.007   WAS/WASL interacting protein family, member 3 [Homo...
MAP9                  0.007   aster-associated protein 
FKBP15                0.007   FK506 binding protein 15, 133kDa 
LOC100290261          0.007   PREDICTED: hypothetical protein XP_002347648 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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