Search of human proteins with 239509054

Search of human proteins with 239509054

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239509054 PREDICTED: similar to RAB19, member RAS oncogene
family [Homo sapiens]
         (339 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239509054 PREDICTED: similar to RAB19, member RAS oncogene fa...   691   0.0  
gi|239754717 PREDICTED: hypothetical protein [Homo sapiens]           389   e-108
gi|239749265 PREDICTED: hypothetical protein [Homo sapiens]           389   e-108
gi|239743362 PREDICTED: hypothetical protein XP_002342841 [Homo ...   389   e-108
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         130   2e-30
gi|50234889 RAB43 protein [Homo sapiens]                              104   1e-22
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]           89   6e-18
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]           85   1e-16
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...    84   2e-16
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]           82   5e-16
gi|254281345 RAB2B protein isoform 2 [Homo sapiens]                    82   7e-16
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                     82   7e-16
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...    82   7e-16
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...    82   7e-16
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]           81   1e-15
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]            81   2e-15
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]          81   2e-15
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]         79   8e-15
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                  79   8e-15
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]          78   1e-14
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]           77   2e-14
gi|116812567 RAB25 [Homo sapiens]                                      77   2e-14
gi|16933567 mel transforming oncogene [Homo sapiens]                   77   3e-14
gi|19923483 GTPase Rab14 [Homo sapiens]                                77   3e-14
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]           76   5e-14
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]            76   5e-14
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]            76   5e-14
gi|10190714 RAS-related protein RAB-22A [Homo sapiens]                 75   8e-14
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]           74   1e-13
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]           74   2e-13

>gi|239509054 PREDICTED: similar to RAB19, member RAS oncogene
           family [Homo sapiens]
          Length = 339

 Score =  691 bits (1783), Expect = 0.0
 Identities = 339/339 (100%), Positives = 339/339 (100%)

Query: 1   MNSLSVPLKSEQFRQYYHLCQYSDPRADSKDEPPNLDQMQVWDTAGQERFRTITQSYYRS 60
           MNSLSVPLKSEQFRQYYHLCQYSDPRADSKDEPPNLDQMQVWDTAGQERFRTITQSYYRS
Sbjct: 1   MNSLSVPLKSEQFRQYYHLCQYSDPRADSKDEPPNLDQMQVWDTAGQERFRTITQSYYRS 60

Query: 61  AHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGSDLSPAHRIPAASPPASSVF 120
           AHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGSDLSPAHRIPAASPPASSVF
Sbjct: 61  AHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGSDLSPAHRIPAASPPASSVF 120

Query: 121 NHSVKQMHQRRVTDARMLQDFQESQNVCLRQLSPSLQTPCIKYLQVTCLVQPPPLPSLPP 180
           NHSVKQMHQRRVTDARMLQDFQESQNVCLRQLSPSLQTPCIKYLQVTCLVQPPPLPSLPP
Sbjct: 121 NHSVKQMHQRRVTDARMLQDFQESQNVCLRQLSPSLQTPCIKYLQVTCLVQPPPLPSLPP 180

Query: 181 PPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDH 240
           PPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDH
Sbjct: 181 PPPPAPRDGAVTVGIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDH 240

Query: 241 IVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAARPRRRSLV 300
           IVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAARPRRRSLV
Sbjct: 241 IVPVRLRGEDGEARRGEGKDTEAPVRSPPATRRVSERSRHFNCGPRACAPAARPRRRSLV 300

Query: 301 EGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 339
           EGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG
Sbjct: 301 EGTSPPERGGANGGLYRCVLGSKPRRRKSIVSGFLPSRG 339


>gi|239754717 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 229

 Score =  389 bits (998), Expect = e-108
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 150 RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 209
           RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP
Sbjct: 40  RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 99

Query: 210 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 269
           APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP
Sbjct: 100 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 159

Query: 270 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 329
           ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS
Sbjct: 160 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 219

Query: 330 IVSGFLPSRG 339
           IVSGFLPSRG
Sbjct: 220 IVSGFLPSRG 229


>gi|239749265 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 229

 Score =  389 bits (998), Expect = e-108
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 150 RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 209
           RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP
Sbjct: 40  RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 99

Query: 210 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 269
           APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP
Sbjct: 100 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 159

Query: 270 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 329
           ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS
Sbjct: 160 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 219

Query: 330 IVSGFLPSRG 339
           IVSGFLPSRG
Sbjct: 220 IVSGFLPSRG 229


>gi|239743362 PREDICTED: hypothetical protein XP_002342841 [Homo
           sapiens]
          Length = 229

 Score =  389 bits (998), Expect = e-108
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 150 RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 209
           RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP
Sbjct: 40  RQLSPSLQTPCIKYLQVTCLVQPPPLPSLPPPPPPAPRDGAVTVGIGVGEAAAAVAAAAP 99

Query: 210 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 269
           APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP
Sbjct: 100 APDVVAVVPGVAASAITVYPTQQRPRNFRDHIVPVRLRGEDGEARRGEGKDTEAPVRSPP 159

Query: 270 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 329
           ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS
Sbjct: 160 ATRRVSERSRHFNCGPRACAPAARPRRRSLVEGTSPPERGGANGGLYRCVLGSKPRRRKS 219

Query: 330 IVSGFLPSRG 339
           IVSGFLPSRG
Sbjct: 220 IVSGFLPSRG 229


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  130 bits (327), Expect = 2e-30
 Identities = 62/64 (96%), Positives = 64/64 (100%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           +MQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM
Sbjct: 67  KMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 126

Query: 98  LIGS 101
           LIG+
Sbjct: 127 LIGN 130


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  104 bits (260), Expect = 1e-22
 Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 4/87 (4%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFRTITQSYYRSA+ AI+AYD+T+RS+F S+PHWI ++ KY  +N+V +
Sbjct: 68  KLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQL 127

Query: 98  LIG--SDLSPAHRIPAASPPASSVFNH 122
           LIG  SDLS    +  A   A S+  H
Sbjct: 128 LIGNKSDLSELREVSLAE--AQSLAEH 152


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 37/71 (52%), Positives = 54/71 (76%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFR+ITQSYYRSA+A I+ YD+T   +F  +P W+ EIE+Y +  V+ +
Sbjct: 59  KLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITV 118

Query: 98  LIGSDLSPAHR 108
           L+G+ +  A R
Sbjct: 119 LVGNKIDLAER 129


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 33/70 (47%), Positives = 54/70 (77%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFR++T +YYR AHA ++ YD+T +++F++I  W+ EI +Y   +V +M
Sbjct: 114 KLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALM 173

Query: 98  LIGSDLSPAH 107
           L+G+ +  AH
Sbjct: 174 LLGNKVDSAH 183


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 33/64 (51%), Positives = 49/64 (76%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFRTIT SYYR AH  I+ YD+T + +F ++  W+ EI++Y + NV  +
Sbjct: 61  KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL 120

Query: 98  LIGS 101
           L+G+
Sbjct: 121 LVGN 124


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 35/69 (50%), Positives = 52/69 (75%), Gaps = 2/69 (2%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFRTIT SYYR AH  I+ YD+T + ++ ++  W+ EI++Y + NV  +
Sbjct: 58  KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKL 117

Query: 98  LIG--SDLS 104
           L+G  SDL+
Sbjct: 118 LVGNKSDLT 126


>gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
          Length = 170

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 33/64 (51%), Positives = 50/64 (78%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQE FR+IT+SYYR A  A++ YD+TRR TF  +  W+ +  ++ ++N+VIM
Sbjct: 10  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIM 69

Query: 98  LIGS 101
           LIG+
Sbjct: 70  LIGN 73


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 33/64 (51%), Positives = 50/64 (78%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQE FR+IT+SYYR A  A++ YD+TRR TF  +  W+ +  ++ ++N+VIM
Sbjct: 56  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIM 115

Query: 98  LIGS 101
           LIG+
Sbjct: 116 LIGN 119


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 33/64 (51%), Positives = 51/64 (79%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFR++T +YYR A A ++ YD+T +S+F++I  W+ EI +Y   +VVIM
Sbjct: 80  KLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIM 139

Query: 98  LIGS 101
           L+G+
Sbjct: 140 LLGN 143


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 33/64 (51%), Positives = 51/64 (79%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFR++T +YYR A A ++ YD+T +S+F++I  W+ EI +Y   +VVIM
Sbjct: 73  KLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIM 132

Query: 98  LIGS 101
           L+G+
Sbjct: 133 LLGN 136


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 1/75 (1%)

Query: 35  NLDQMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAAN- 93
           N  ++ +WDTAGQERFRT+T SYYR A   I+ YD+TRR TF  + +W++E+E Y   N 
Sbjct: 55  NKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRND 114

Query: 94  VVIMLIGSDLSPAHR 108
           +V ML+G+ +   +R
Sbjct: 115 IVNMLVGNKIDKENR 129


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQE FR+IT+SYYR A  A++ YD+TRR TF  +  W+ +  ++  +N+VIM
Sbjct: 56  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIM 115

Query: 98  LIG--SDLSPAHRI 109
           LIG  SDL     +
Sbjct: 116 LIGNKSDLESRREV 129


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 31/66 (46%), Positives = 50/66 (75%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERF +IT +YYRSA   I+ YD+T++ TF+ +P W+  I+KY + +  ++
Sbjct: 92  RLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELL 151

Query: 98  LIGSDL 103
           L+G+ L
Sbjct: 152 LVGNKL 157


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 40  QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLI 99
           Q+WDTAGQER+R IT +YYR A  A++ YD+ +  T+E++  W+ E+  +  +N+VIML+
Sbjct: 63  QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLV 122

Query: 100 G--SDLSPAHRIP 110
           G  SDL     +P
Sbjct: 123 GNKSDLRHLRAVP 135


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 40  QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLI 99
           Q+WDTAGQER+R IT +YYR A  A++ YD+ +  T+E++  W+ E+  +  +N+VIML+
Sbjct: 63  QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLV 122

Query: 100 G--SDLSPAHRIP 110
           G  SDL     +P
Sbjct: 123 GNKSDLRHLRAVP 135


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 2/74 (2%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFR++T+SYYR A  A++ YD+T R T+ S+  W+ +     + N+V++
Sbjct: 58  KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVI 117

Query: 98  LIGS--DLSPAHRI 109
           L G+  DL P   +
Sbjct: 118 LCGNKKDLDPEREV 131


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 5/148 (3%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQER+RTIT +YYR A   I+ YD+T   +F ++  W  +I+ Y   N  ++
Sbjct: 80  KLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVI 139

Query: 98  LIGSDLSPAHRIPAASPPASSVFNHSVKQMHQRRVTD-ARMLQDFQESQNVCLRQLSPSL 156
           L+G+          ++     +      +  +    D   + Q F+   ++   ++S SL
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199

Query: 157 QTPCIKYLQVTCLVQPPPLPSLPPPPPP 184
           +T       +T   Q   L   PPPP P
Sbjct: 200 ETD----PAITAAKQNTRLKETPPPPQP 223


>gi|116812567 RAB25 [Homo sapiens]
          Length = 213

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 40  QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLI 99
           Q+WDTAG ER+R IT +YYR A  A++ +DLT+  T+  +  W+ E+  +  A +V+ML+
Sbjct: 64  QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123

Query: 100 G--SDLSPAHRIP 110
           G  SDLS A  +P
Sbjct: 124 GNKSDLSQAREVP 136


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 31/64 (48%), Positives = 49/64 (76%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFRTIT +YYR A   ++ YD+T   +F++I +WI  IE++ +A+V  M
Sbjct: 58  KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKM 117

Query: 98  LIGS 101
           ++G+
Sbjct: 118 ILGN 121


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 32/64 (50%), Positives = 46/64 (71%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFR +T+SYYR A  A++ YD+TRRST+  +  W+ +       N VI+
Sbjct: 61  KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII 120

Query: 98  LIGS 101
           LIG+
Sbjct: 121 LIGN 124


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 29/64 (45%), Positives = 48/64 (75%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFR++T+SYYR A  A++ YD+T R T+ ++ +W+ +     + N+VI+
Sbjct: 63  KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVII 122

Query: 98  LIGS 101
           L G+
Sbjct: 123 LCGN 126


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 4/146 (2%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQER+RTIT +YYR A   I+ YD+T   +F ++  W  +I+ Y   N  ++
Sbjct: 72  KLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVL 131

Query: 98  LIGSDLSPAHRIPAASPPASSVFNHSVKQMHQRRVTD-ARMLQDFQESQNVCLRQLSPSL 156
           L+G+          +S     + +H   +  +    D   + Q F+   +V   ++S SL
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191

Query: 157 QTPCIKYLQVTCLVQPPPLPSLPPPP 182
            T       VT   Q P L     PP
Sbjct: 192 DT---ADPAVTGAKQGPQLSDQQVPP 214


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 30/64 (46%), Positives = 49/64 (76%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQERFRTIT +YYR A   ++ YD+T   +F++I +WI  IE++ +++V  M
Sbjct: 58  KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERM 117

Query: 98  LIGS 101
           ++G+
Sbjct: 118 ILGN 121


>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
          Length = 194

 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 29/66 (43%), Positives = 46/66 (69%)

Query: 36  LDQMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVV 95
           L +  +WDTAGQERFR +   YYR + AAII YD+T+  TF ++ +W+ E+ ++G  N+V
Sbjct: 53  LHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIV 112

Query: 96  IMLIGS 101
           + + G+
Sbjct: 113 VAIAGN 118


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 29/149 (19%)

Query: 38  QMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIM 97
           ++Q+WDTAGQER+RTIT +YYR A   I+ YD+T   +F ++  W  +I+ Y   N  ++
Sbjct: 72  KLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVI 131

Query: 98  LIGS--DLSPAHRIPAASP------------PASSVFNHSVKQMHQRRV----------- 132
           L+G+  D+     +P                 AS+  N SV+Q  +R V           
Sbjct: 132 LVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSL 191

Query: 133 -TDARMLQDFQESQNVCLRQLSPSLQTPC 160
            TD  ML     S+N  L    P LQ  C
Sbjct: 192 DTDPSML---GSSKNTRLSDTPPLLQQNC 217


>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
          Length = 195

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 2/77 (2%)

Query: 36  LDQMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVV 95
           L +  +WDTAGQERF ++   YYR + AA+I YD+T++ +F ++  W+ E++++G  N+V
Sbjct: 54  LHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIV 113

Query: 96  IMLIGS--DLSPAHRIP 110
           + + G+  DLS    +P
Sbjct: 114 MAIAGNKCDLSDIREVP 130


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,457,014
Number of Sequences: 37866
Number of extensions: 953734
Number of successful extensions: 16495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 416
Number of HSP's that attempted gapping in prelim test: 10174
Number of HSP's gapped (non-prelim): 4499
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.