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Search of human proteins with 239508694
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239508694 PREDICTED: hypothetical protein [Homo sapiens]
(149 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239508694 PREDICTED: hypothetical protein [Homo sapiens] 311 2e-85
gi|239744252 PREDICTED: hypothetical protein XP_002343084 [Homo ... 307 2e-84
gi|239742765 PREDICTED: hypothetical protein XP_002342631 [Homo ... 305 7e-84
gi|239740976 PREDICTED: hypothetical protein XP_002344291 [Homo ... 305 7e-84
gi|239745658 PREDICTED: hypothetical protein XP_002344164 [Homo ... 299 5e-82
gi|239743164 PREDICTED: hypothetical protein [Homo sapiens] 191 1e-49
gi|239508826 PREDICTED: hypothetical protein [Homo sapiens] 191 1e-49
gi|239753887 PREDICTED: hypothetical protein [Homo sapiens] 60 9e-10
gi|153791662 coiled-coil domain containing 71 [Homo sapiens] 37 0.008
gi|169167742 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 34 0.052
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 34 0.052
gi|239742483 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 34 0.052
gi|169166558 PREDICTED: similar to hCG18094 [Homo sapiens] 32 0.26
gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens] 32 0.26
gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens] 31 0.34
gi|169166473 PREDICTED: similar to hCG18094 [Homo sapiens] 31 0.34
gi|39780597 PNMA-like 1 isoform a [Homo sapiens] 31 0.34
gi|30795231 brain abundant, membrane attached signal protein 1 [... 31 0.44
gi|157266264 pleckstrin homology-like domain, family B, member 3... 31 0.44
gi|89941479 hypothetical protein LOC148137 [Homo sapiens] 31 0.44
gi|42733592 hypothetical protein LOC399693 [Homo sapiens] 31 0.44
gi|4759068 cytochrome oxidase deficient homolog 1 [Homo sapiens] 30 0.58
gi|169211438 PREDICTED: hypothetical protein [Homo sapiens] 30 0.58
gi|169211910 PREDICTED: hypothetical protein [Homo sapiens] 30 0.58
gi|169211055 PREDICTED: hypothetical protein [Homo sapiens] 30 0.58
gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Hom... 30 0.75
gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Hom... 30 0.75
gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo sap... 30 0.75
gi|40068487 von Willebrand factor A domain containing 1 isoform ... 30 0.75
gi|40068485 von Willebrand factor A domain containing 1 isoform ... 30 0.75
>gi|239508694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 149
Score = 311 bits (796), Expect = 2e-85
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF 60
MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF
Sbjct: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF 60
Query: 61 ETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
ETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS
Sbjct: 61 ETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
Query: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
FAPGEAVERTELGPGRPTCCSSRPTSRPT
Sbjct: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
>gi|239744252 PREDICTED: hypothetical protein XP_002343084 [Homo
sapiens]
Length = 149
Score = 307 bits (787), Expect = 2e-84
Identities = 147/149 (98%), Positives = 148/149 (99%)
Query: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF 60
MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF
Sbjct: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF 60
Query: 61 ETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
E QEAGPAKADWRSSSAPEEAAK+QKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS
Sbjct: 61 ERQEAGPAKADWRSSSAPEEAAKTQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
Query: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
FAPGEAVERTELGPGRPTCCSSRPTSRPT
Sbjct: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
>gi|239742765 PREDICTED: hypothetical protein XP_002342631 [Homo
sapiens]
Length = 149
Score = 305 bits (782), Expect = 7e-84
Identities = 147/149 (98%), Positives = 147/149 (98%)
Query: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF 60
MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRV CEAEAEAGPVQAF
Sbjct: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVCCEAEAEAGPVQAF 60
Query: 61 ETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
E QEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS
Sbjct: 61 ERQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
Query: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
FAPGEAVERTELGPGRPTCCSSRPTSRPT
Sbjct: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
>gi|239740976 PREDICTED: hypothetical protein XP_002344291 [Homo
sapiens]
Length = 149
Score = 305 bits (782), Expect = 7e-84
Identities = 147/149 (98%), Positives = 147/149 (98%)
Query: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF 60
MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRV CEAEAEAGPVQAF
Sbjct: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVCCEAEAEAGPVQAF 60
Query: 61 ETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
E QEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS
Sbjct: 61 ERQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
Query: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
FAPGEAVERTELGPGRPTCCSSRPTSRPT
Sbjct: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
>gi|239745658 PREDICTED: hypothetical protein XP_002344164 [Homo
sapiens]
Length = 149
Score = 299 bits (766), Expect = 5e-82
Identities = 144/149 (96%), Positives = 144/149 (96%)
Query: 1 MADVRNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAF 60
MADVRNELGLKRPLAGRSWTCRSGRK GALDWG RSEARASWAWRVRCEAEAEAGPVQAF
Sbjct: 1 MADVRNELGLKRPLAGRSWTCRSGRKPGALDWGDRSEARASWAWRVRCEAEAEAGPVQAF 60
Query: 61 ETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
E QEAGPAKA WRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS
Sbjct: 61 ERQEAGPAKAAWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGS 120
Query: 121 FAPGEAVERTELGPGRPTCCSSRPTSRPT 149
FAPGEA ERTELGPGRPTCCSSRPTSRPT
Sbjct: 121 FAPGEAAERTELGPGRPTCCSSRPTSRPT 149
>gi|239743164 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 191 bits (486), Expect = 1e-49
Identities = 98/131 (74%), Positives = 107/131 (81%), Gaps = 3/131 (2%)
Query: 6 NELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFETQEA 65
N +G KRPLAG SW CRSG++AGALD GG SEARASWAWRVRCEAE GPVQAF QEA
Sbjct: 2 NPMGQKRPLAGGSWACRSGQEAGALDSGGCSEARASWAWRVRCEAET--GPVQAFGRQEA 59
Query: 66 GPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGSFAPGE 125
GP +ADWRSSS EAA+SQK GLGRPP M+WAGPKEATGRQE+LGLE L + +FAPGE
Sbjct: 60 GPGEADWRSSSESAEAAESQKWGLGRPPGGMNWAGPKEATGRQEDLGLEILIQ-TFAPGE 118
Query: 126 AVERTELGPGR 136
A ER ELG GR
Sbjct: 119 AAERPELGLGR 129
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 5 RNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFET-- 62
R ELGL R + W CR R+AGA+ G++ WA+R R EA A P QA+ T
Sbjct: 122 RPELGLGRMI----WACRGHREAGAVP--GQAYLMTVWAYRGR--REAGAVPGQAYLTTV 173
Query: 63 -------QEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWA 99
+E + S+ P AK Q G RPPR MS A
Sbjct: 174 WSCRGCREEELGLERPTGGSAGPGAHAKEQTPGRERPPRRMSLA 217
>gi|239508826 PREDICTED: hypothetical protein [Homo sapiens]
Length = 222
Score = 191 bits (486), Expect = 1e-49
Identities = 98/131 (74%), Positives = 107/131 (81%), Gaps = 3/131 (2%)
Query: 6 NELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFETQEA 65
N +G KRPLAG SW CRSG++AGALD GG SEARASWAWRVRCEAE GPVQAF QEA
Sbjct: 2 NPMGQKRPLAGGSWACRSGQEAGALDSGGCSEARASWAWRVRCEAET--GPVQAFGRQEA 59
Query: 66 GPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERLTRGSFAPGE 125
GP +ADWRSSS EAA+SQK GLGRPP M+WAGPKEATGRQE+LGLE L + +FAPGE
Sbjct: 60 GPGEADWRSSSESAEAAESQKWGLGRPPGGMNWAGPKEATGRQEDLGLEILIQ-TFAPGE 118
Query: 126 AVERTELGPGR 136
A ER ELG GR
Sbjct: 119 AAERPELGLGR 129
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 5 RNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFET-- 62
R ELGL R + W CR R+AGA+ G++ WA+R R EA A P QA+ T
Sbjct: 122 RPELGLGRMI----WACRGHREAGAVP--GQAYLMTVWAYRGR--REAGAVPGQAYLTTV 173
Query: 63 -------QEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWA 99
+E + S+ P AK Q G RPPR MS A
Sbjct: 174 WSCRGCREEELGLERPTGGSAGPGAHAKEQTPGRERPPRRMSLA 217
>gi|239753887 PREDICTED: hypothetical protein [Homo sapiens]
Length = 127
Score = 59.7 bits (143), Expect = 9e-10
Identities = 48/131 (36%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 18 SWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKADWRSSSA 77
+W CR R+AGA G EA W R EA+AGP A + + + S
Sbjct: 2 TWACRGRREAGA----GPGEADFRTIWACRGRQEAQAGPRGAHQPEAVWGLQMPSEGRSW 57
Query: 78 PEEAAKSQKRGLGR-------PPRAM-SWAG--PKEATGRQEELGLERLTRGSFAPGEAV 127
P EA + GLG P RA SWAG K+ GR E GLE G PGE
Sbjct: 58 PGEATVRPELGLGSLASGSCGPTRAAGSWAGAESKDVVGRPES-GLETQPGGRAGPGEDA 116
Query: 128 ERTELGPGRPT 138
R ++G RPT
Sbjct: 117 GRLQVGLERPT 127
Score = 36.2 bits (82), Expect = 0.010
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 26/105 (24%)
Query: 41 SWAWRVRCEAEAEAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAG 100
+WA C EAG AGP +AD+R+ A ++Q AG
Sbjct: 2 TWA----CRGRREAG---------AGPGEADFRTIWACRGRQEAQ-------------AG 35
Query: 101 PKEATGRQEELGLERLTRGSFAPGEAVERTELGPGRPTCCSSRPT 145
P+ A + GL+ + G PGEA R ELG G S PT
Sbjct: 36 PRGAHQPEAVWGLQMPSEGRSWPGEATVRPELGLGSLASGSCGPT 80
>gi|153791662 coiled-coil domain containing 71 [Homo sapiens]
Length = 467
Score = 36.6 bits (83), Expect = 0.008
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 35 RSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKADWRSSS--APEEAAKSQKRGLGRP 92
R++A+A+ +V+ +A+A+A V+A A AKA ++ + A + A++Q RG GRP
Sbjct: 310 RAKAKAA---QVKAKAKAKAAQVKAKAKVMAAWAKAKAKAKAVRAKAKVARTQPRGRGRP 366
Query: 93 P-RAMSWAGPKEATGRQEELGLERLTRGSFAPGEAVERTELGPGRP 137
A + K R E +G +R +RT LGP P
Sbjct: 367 KGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRSP 412
>gi|169167742 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 494
Score = 33.9 bits (76), Expect = 0.052
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 50 AEAEAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQE 109
A A GP QA E E G A R+ ++ + R G PP A+ GP R+
Sbjct: 348 ARAARGP-QAQEEDEVGGAGQRGRTGQEDADSREGSPRA-GLPP-ALGSRGPAAPAPRKA 404
Query: 110 EL-GLERLTRGSFAPGEAVERTELGPG-RPTCCSSRPTSR 147
L L+RL R S PG V R + PT RP +
Sbjct: 405 SLLPLQRLRRRSVRPGVVVPRVRVSKAPAPTFQPERPARK 444
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 33.9 bits (76), Expect = 0.052
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 50 AEAEAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQE 109
A A GP QA E E G A R+ ++ + R G PP A+ GP R+
Sbjct: 860 ARAARGP-QAQEEDEVGGAGQRGRTGQEDADSREGSPRA-GLPP-ALGSRGPAAPAPRKA 916
Query: 110 EL-GLERLTRGSFAPGEAVERTELGPG-RPTCCSSRPTSR 147
L L+RL R S PG V R + PT RP +
Sbjct: 917 SLLPLQRLRRRSVRPGVVVPRVRVSKAPAPTFQPERPARK 956
>gi|239742483 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 494
Score = 33.9 bits (76), Expect = 0.052
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 50 AEAEAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQE 109
A A GP QA E E G A R+ ++ + R G PP A+ GP R+
Sbjct: 348 ARAARGP-QAQEEDEVGGAGQRGRTGQEDADSREGSPRA-GLPP-ALGSRGPAAPAPRKA 404
Query: 110 EL-GLERLTRGSFAPGEAVERTELGPG-RPTCCSSRPTSR 147
L L+RL R S PG V R + PT RP +
Sbjct: 405 SLLPLQRLRRRSVRPGVVVPRVRVSKAPAPTFQPERPARK 444
>gi|169166558 PREDICTED: similar to hCG18094 [Homo sapiens]
Length = 459
Score = 31.6 bits (70), Expect = 0.26
Identities = 36/111 (32%), Positives = 40/111 (36%), Gaps = 29/111 (26%)
Query: 31 DWG---GRSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKADWRS----SSAPEEAAK 83
DW GR +A A W WR R AG G WR S+A AA
Sbjct: 357 DWWEEPGRLKAGAGWGWRAR-----RAG---------TGVPGRGWRGDRVRSAAGRYAAA 402
Query: 84 SQKRGLGRPPRAMSWAGPKEATGRQEELGLER--------LTRGSFAPGEA 126
G G P RA S+ G Q L LER L +G PG A
Sbjct: 403 GAGGGGGVPARADSFPGLHAQLEAQHWLELERSRERRLQALQQGGSGPGPA 453
>gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 329
Score = 31.6 bits (70), Expect = 0.26
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 22 RSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKADWR---SSSAP 78
R G A+ GG+ A S E+ P + GP + +R S+ P
Sbjct: 87 RPGPGVSAVSAGGQQRAPESQE-----RPAEESAPALMPSSAPRGPTEPAFRRPSSADRP 141
Query: 79 EEAAKSQKRGLGRPPRAM-SWAGPKEATGR 107
S G GR PRAM S +G EATG+
Sbjct: 142 LAPGPSSSPGAGRAPRAMASPSGSSEATGK 171
>gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens]
Length = 459
Score = 31.2 bits (69), Expect = 0.34
Identities = 35/111 (31%), Positives = 41/111 (36%), Gaps = 29/111 (26%)
Query: 31 DWG---GRSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKADWRS----SSAPEEAAK 83
DW GR +A A W WR R AG G WR S+A AA
Sbjct: 357 DWWEEPGRLKAGAGWGWRAR-----RAG---------TGVPGRGWRGDRVRSAAGRYAAA 402
Query: 84 SQKRGLGRPPRAMSWAGPKEATGRQEELGLER--------LTRGSFAPGEA 126
G G P RA ++ G + Q L LER L +G PG A
Sbjct: 403 GAGGGGGVPARADAFPGLQAQLEAQHWLELERSRERRLQALQQGGSGPGPA 453
>gi|169166473 PREDICTED: similar to hCG18094 [Homo sapiens]
Length = 459
Score = 31.2 bits (69), Expect = 0.34
Identities = 35/111 (31%), Positives = 41/111 (36%), Gaps = 29/111 (26%)
Query: 31 DWG---GRSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKADWRS----SSAPEEAAK 83
DW GR +A A W WR R AG G WR S+A AA
Sbjct: 357 DWWEEPGRLKAGAGWGWRAR-----RAG---------TGVPGRGWRGDRVRSAAGRYAAA 402
Query: 84 SQKRGLGRPPRAMSWAGPKEATGRQEELGLER--------LTRGSFAPGEA 126
G G P RA ++ G + Q L LER L +G PG A
Sbjct: 403 GAGGGGGVPARADAFPGLQAQLEAQHWLELERSRERRLQALQQGGSGPGPA 453
>gi|39780597 PNMA-like 1 isoform a [Homo sapiens]
Length = 439
Score = 31.2 bits (69), Expect = 0.34
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 30/142 (21%)
Query: 5 RNELGLKRPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFET-- 62
+ EL LK+P+A +W G + D R EAE+ G ++ +
Sbjct: 298 KEELALKKPMAKCAW---KGPREPPQD--------------ARAEAESPGGASESDQDGG 340
Query: 63 QEAGPAK--ADWRSSSAPEEAAKSQKRGLGRPPRAM--SWAG------PKEATGRQEELG 112
E+ P K W S+ P K +K LG + S G PK+ G + E
Sbjct: 341 HESPPKKKAVAWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREAS 400
Query: 113 LERLTRGSFAPGEAVERTELGP 134
++ RG P EA T GP
Sbjct: 401 DQKAPRGQ-QPAEATASTSRGP 421
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 30.8 bits (68), Expect = 0.44
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 50 AEAEAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKE----AT 105
A+ EA + +T+ A AKA+ + E+AA G P A + A P E A
Sbjct: 78 AKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAA 137
Query: 106 GRQ--EELGLERLTRGSFAPGEAVERTELGP---GRPTCCSSRPTSRPT 149
G + +E G + T AP +++ P +P + P+S+ T
Sbjct: 138 GEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKET 186
>gi|157266264 pleckstrin homology-like domain, family B, member 3
[Homo sapiens]
Length = 640
Score = 30.8 bits (68), Expect = 0.44
Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 33 GGRSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRP 92
G E+R A V E + G Q E +E G + S APE P
Sbjct: 27 GHPEESREQEASEVLAEPSSRGGAEQQAEEEEVGEGSSTESSRDAPE----------ATP 76
Query: 93 PRAMSWAGPKEATGRQEELGLERLTRG 119
P AM+ P + R+ G R +G
Sbjct: 77 PIAMAATPPASTSSREGVRGAARRLQG 103
>gi|89941479 hypothetical protein LOC148137 [Homo sapiens]
Length = 425
Score = 30.8 bits (68), Expect = 0.44
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 53 EAGPVQAFETQEAGPAKAD--WRSSSAPEEAAKSQKRGLGRP 92
+A P E Q AGP AD W S +P+ +++S G +P
Sbjct: 111 QAQPTSREERQPAGPTPADFWWLQSDSPDPSSQSAAAGANKP 152
>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
Length = 953
Score = 30.8 bits (68), Expect = 0.44
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 43 AWRVRCEAEAEAGP-VQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAMSWAGP 101
AW CE + GP ++ + + PA+ W SS + + RG+G P A A P
Sbjct: 544 AWTA-CETWEDPGPRLRNPLERPSPPAQRPWSSSGVQRAGPQGKGRGIGSPVSAAKHALP 602
Query: 102 KEATGR--QEELGLERLT-------RGSFAPGEAVE 128
+ TG Q LG E+ T RG P + E
Sbjct: 603 R-PTGSFPQNPLGKEKDTLRPCPRSRGLLGPSHSSE 637
>gi|4759068 cytochrome oxidase deficient homolog 1 [Homo sapiens]
Length = 301
Score = 30.4 bits (67), Expect = 0.58
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 21/94 (22%)
Query: 12 RPLAGRSWTCRSGRKAGALDWGGRSEARASWAWRVRCEAEAEAGPVQAFETQEAGPAKAD 71
RPL G+ W L++ G +E A R C +AEA
Sbjct: 13 RPLGGQLWRFLPR----GLEFWGPAEGTARVLLRQFCARQAEA----------------- 51
Query: 72 WRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEAT 105
WR+S P ++ RPP S GP ++T
Sbjct: 52 WRASGRPGYCLGTRPLSTARPPPPWSQKGPGDST 85
>gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 30.4 bits (67), Expect = 0.58
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 88 GLGRPPR-AMSWAGPKEATGRQEELGLERLTR--GSFAPGEAVERTELGPGRP 137
GLG PP+ A SW G T R+ ELG R PG R E GRP
Sbjct: 2 GLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRP 54
>gi|169211910 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 30.4 bits (67), Expect = 0.58
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 88 GLGRPPR-AMSWAGPKEATGRQEELGLERLTR--GSFAPGEAVERTELGPGRP 137
GLG PP+ A SW G T R+ ELG R PG R E GRP
Sbjct: 2 GLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRP 54
>gi|169211055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 30.4 bits (67), Expect = 0.58
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 88 GLGRPPR-AMSWAGPKEATGRQEELGLERLTR--GSFAPGEAVERTELGPGRP 137
GLG PP+ A SW G T R+ ELG R PG R E GRP
Sbjct: 2 GLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRP 54
>gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Homo
sapiens]
Length = 697
Score = 30.0 bits (66), Expect = 0.75
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 42 WAWRVRCEAEAEAGPVQAFETQEAGPAKAD---WRSSSAPEEAAKSQKRGLGRPPRA 95
WAW+ + Q + QE GP ++ W+ + EE +Q G + PRA
Sbjct: 611 WAWQTWWQRILRLRVAQQLQQQEDGPLRSGTNAWQPGAQGEELPVAQDPGASQAPRA 667
>gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Homo
sapiens]
Length = 697
Score = 30.0 bits (66), Expect = 0.75
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 42 WAWRVRCEAEAEAGPVQAFETQEAGPAKAD---WRSSSAPEEAAKSQKRGLGRPPRA 95
WAW+ + Q + QE GP ++ W+ + EE +Q G + PRA
Sbjct: 611 WAWQTWWQRILRLRVAQQLQQQEDGPLRSGTNAWQPGAQGEELPVAQDPGASQAPRA 667
>gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo
sapiens]
Length = 697
Score = 30.0 bits (66), Expect = 0.75
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 42 WAWRVRCEAEAEAGPVQAFETQEAGPAKAD---WRSSSAPEEAAKSQKRGLGRPPRA 95
WAW+ + Q + QE GP ++ W+ + EE +Q G + PRA
Sbjct: 611 WAWQTWWQRILRLRVAQQLQQQEDGPLRSGTNAWQPGAQGEELPVAQDPGASQAPRA 667
>gi|40068487 von Willebrand factor A domain containing 1 isoform 2
[Homo sapiens]
Length = 233
Score = 30.0 bits (66), Expect = 0.75
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 53 EAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAM--SWAGPKEATGRQEE 110
EAGP + AGPA + APEEA + PR++ SWA A G
Sbjct: 93 EAGPGASGPESGAGPAPTQLAALPAPEEAGPERIVISHARPRSLRVSWA---PALGSAAA 149
Query: 111 LGLERLTRGSFAPGEAVERTELGPGR 136
LG + G GEA +R E+ GR
Sbjct: 150 LGY-HVQFGPLRGGEA-QRVEVPAGR 173
>gi|40068485 von Willebrand factor A domain containing 1 isoform 1
[Homo sapiens]
Length = 445
Score = 30.0 bits (66), Expect = 0.75
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 53 EAGPVQAFETQEAGPAKADWRSSSAPEEAAKSQKRGLGRPPRAM--SWAGPKEATGRQEE 110
EAGP + AGPA + APEEA + PR++ SWA A G
Sbjct: 305 EAGPGASGPESGAGPAPTQLAALPAPEEAGPERIVISHARPRSLRVSWA---PALGSAAA 361
Query: 111 LGLERLTRGSFAPGEAVERTELGPGR 136
LG + G GEA +R E+ GR
Sbjct: 362 LGY-HVQFGPLRGGEA-QRVEVPAGR 385
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,066,362
Number of Sequences: 37866
Number of extensions: 332578
Number of successful extensions: 1261
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 1166
Number of HSP's gapped (non-prelim): 170
length of query: 149
length of database: 18,247,518
effective HSP length: 93
effective length of query: 56
effective length of database: 14,725,980
effective search space: 824654880
effective search space used: 824654880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.