SCO1 30812

Name: SCO1	Sequence: fasta or formatted (301aa)		NCBI GI: 4759068
Description: cytochrome oxidase deficient homolog 1		Referenced in: Iron, Copper, and Arsenic Metabolism Oxidative Phosphorylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 20 2 C cysteine 1.3 4 1 D aspartate 5.3 16 1 E glutamate 7.0 21 2 F phenylalanine 3.7 11 1 G glycine 9.3 28 2 H histidine 2.0 6 1 I isoleucine 5.3 16 2 K lysine 7.0 21 2 L leucine 9.3 28 2 M methionine 2.3 7 1 N asparagine 0.7 2 1 P proline 8.6 26 4 Q glutamine 3.0 9 1 R arginine 7.3 22 1 S serine 4.7 14 1 T threonine 6.0 18 2 V valine 5.0 15 2 W tryptophan 2.0 6 1 Y tyrosine 3.7 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cytochrome oxidase deficient homolog 1 SCO2 0.310 cytochrome oxidase deficient homolog 2 C1QL2 0.017 complement component 1, q subcomponent-like 2 [Homo... SYNJ1 0.015 synaptojanin 1 isoform d LOC100131391 0.013 PREDICTED: hypothetical protein LOC100131391 0.013 PREDICTED: hypothetical protein ACBD4 0.013 acyl-Coenzyme A binding domain containing 4 isoform... ACBD4 0.013 acyl-Coenzyme A binding domain containing 4 isoform... LOC100130465 0.013 PREDICTED: hypothetical protein LOC100130465 0.013 PREDICTED: hypothetical protein LOC100130465 0.013 PREDICTED: hypothetical protein MED25 0.013 mediator complex subunit 25 PHF15 0.012 PHD finger protein 15 LOC100288692 0.012 PREDICTED: hypothetical protein XP_002343084 PRR18 0.012 proline rich region 18 LOC100128994 0.012 PREDICTED: hypothetical protein NFE2L2 0.010 nuclear factor erythroid 2-like 2 isoform 3 LOC100289383 0.010 PREDICTED: hypothetical protein XP_002344164 LOC100286887 0.010 PREDICTED: hypothetical protein XP_002342631 LOC100288609 0.010 PREDICTED: hypothetical protein XP_002344291 ZCCHC2 0.010 zinc finger, CCHC domain containing 2 DNAJB6 0.010 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ... CNGB3 0.010 cyclic nucleotide gated channel beta 3 LOC646396 0.008 PREDICTED: similar to hCG2042704 LOC646396 0.008 PREDICTED: similar to hCG2042704 LOC100294070 0.008 PREDICTED: hypothetical protein TTC9B 0.008 tetratricopeptide repeat domain 9B FLJ36644 0.008 PREDICTED: hypothetical protein FARP2 0.008 FERM, RhoGEF and pleckstrin domain protein 2 NRL 0.008 neural retina leucine zipper Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.