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Search of human proteins with 238814389
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238814389 zinc finger, MYND domain containing 11 isoform a
[Homo sapiens]
(602 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238814389 zinc finger, MYND domain containing 11 isoform a [H... 1263 0.0
gi|238814385 zinc finger, MYND domain containing 11 isoform a [H... 1263 0.0
gi|238814387 zinc finger, MYND domain containing 11 isoform b [H... 1159 0.0
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 186 5e-47
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 186 5e-47
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 186 7e-47
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 54 5e-07
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 53 7e-07
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 53 7e-07
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 53 7e-07
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 52 1e-06
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 51 3e-06
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 49 1e-05
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... 49 1e-05
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 49 1e-05
gi|21071070 transmembrane channel-like 1 [Homo sapiens] 49 2e-05
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 49 2e-05
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 48 3e-05
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 47 5e-05
gi|148746195 trichohyalin [Homo sapiens] 46 9e-05
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 45 1e-04
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 45 2e-04
gi|38327039 heat shock 70kDa protein 4 [Homo sapiens] 44 3e-04
gi|58530840 desmoplakin isoform I [Homo sapiens] 44 4e-04
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 44 4e-04
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 44 6e-04
gi|92859701 myosin VI [Homo sapiens] 43 7e-04
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 43 7e-04
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 43 0.001
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 43 0.001
>gi|238814389 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 1263 bits (3269), Expect = 0.0
Identities = 602/602 (100%), Positives = 602/602 (100%)
Query: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV
Sbjct: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
Query: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR
Sbjct: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
Query: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG
Sbjct: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
Query: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI 240
KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI
Sbjct: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI 240
Query: 241 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 300
ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ
Sbjct: 241 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 300
Query: 301 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 360
KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG
Sbjct: 301 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 360
Query: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS
Sbjct: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
Query: 421 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 480
SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD
Sbjct: 421 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 480
Query: 481 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 540
RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV
Sbjct: 481 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 540
Query: 541 EEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRR 600
EEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRR
Sbjct: 541 EEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRR 600
Query: 601 KR 602
KR
Sbjct: 601 KR 602
>gi|238814385 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 1263 bits (3269), Expect = 0.0
Identities = 602/602 (100%), Positives = 602/602 (100%)
Query: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV
Sbjct: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
Query: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR
Sbjct: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
Query: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG
Sbjct: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
Query: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI 240
KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI
Sbjct: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI 240
Query: 241 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 300
ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ
Sbjct: 241 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 300
Query: 301 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 360
KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG
Sbjct: 301 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 360
Query: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS
Sbjct: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
Query: 421 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 480
SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD
Sbjct: 421 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 480
Query: 481 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 540
RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV
Sbjct: 481 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 540
Query: 541 EEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRR 600
EEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRR
Sbjct: 541 EEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRR 600
Query: 601 KR 602
KR
Sbjct: 601 KR 602
>gi|238814387 zinc finger, MYND domain containing 11 isoform b [Homo
sapiens]
Length = 567
Score = 1159 bits (2998), Expect = 0.0
Identities = 561/562 (99%), Positives = 561/562 (99%), Gaps = 1/562 (0%)
Query: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV
Sbjct: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
Query: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR
Sbjct: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
Query: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG
Sbjct: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
Query: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI 240
KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYG DSEQADI
Sbjct: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYG-DSEQADI 239
Query: 241 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 300
ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ
Sbjct: 240 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 299
Query: 301 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 360
KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG
Sbjct: 300 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 359
Query: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS
Sbjct: 360 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 419
Query: 421 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 480
SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD
Sbjct: 420 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 479
Query: 481 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 540
RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV
Sbjct: 480 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 539
Query: 541 EEIKKLATQHKQLISQTKKKQW 562
EEIKKLATQHKQLISQTKKKQW
Sbjct: 540 EEIKKLATQHKQLISQTKKKQW 561
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 186 bits (472), Expect = 5e-47
Identities = 100/286 (34%), Positives = 154/286 (53%), Gaps = 23/286 (8%)
Query: 88 PGDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPV 144
P D + + N D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP
Sbjct: 97 PVDVVPQDGRN-DFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPE 149
Query: 145 CRSIKKKNTNK-----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLV 192
C I + +++ L+F + +MK+ D +K +HP Y +
Sbjct: 150 CEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYI 209
Query: 193 HSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHEL 252
+D+ T+++ + Y E F ADA+ +LHN +I+ G + + IA+++ K HE+
Sbjct: 210 FHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEM 269
Query: 253 DELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFG 312
+E+++C C+ + + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG
Sbjct: 270 NEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG 329
Query: 313 HHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 358
H RAW+P N ++ I K + A E+E++ +R
Sbjct: 330 -QHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 374
Score = 95.9 bits (237), Expect = 9e-20
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 401 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 460
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 841 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 900
Query: 461 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 513
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 901 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 952
Query: 514 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQWCYNCEEEAMY 572
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQWC NC++EA++
Sbjct: 953 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIF 1011
Query: 573 HCCWNTSYCSIKCQQEHWHAEHKRTC 598
+CCWNTSYC CQQ HW EH ++C
Sbjct: 1012 YCCWNTSYCDYPCQQAHW-PEHMKSC 1036
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 186 bits (472), Expect = 5e-47
Identities = 100/286 (34%), Positives = 154/286 (53%), Gaps = 23/286 (8%)
Query: 88 PGDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPV 144
P D + + N D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP
Sbjct: 97 PVDVVPQDGRN-DFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPE 149
Query: 145 CRSIKKKNTNK-----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLV 192
C I + +++ L+F + +MK+ D +K +HP Y +
Sbjct: 150 CEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYI 209
Query: 193 HSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHEL 252
+D+ T+++ + Y E F ADA+ +LHN +I+ G + + IA+++ K HE+
Sbjct: 210 FHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEM 269
Query: 253 DELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFG 312
+E+++C C+ + + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG
Sbjct: 270 NEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG 329
Query: 313 HHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 358
H RAW+P N ++ I K + A E+E++ +R
Sbjct: 330 -QHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 374
Score = 95.9 bits (237), Expect = 9e-20
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 401 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 460
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 841 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 900
Query: 461 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 513
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 901 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 952
Query: 514 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQWCYNCEEEAMY 572
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQWC NC++EA++
Sbjct: 953 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIF 1011
Query: 573 HCCWNTSYCSIKCQQEHWHAEHKRTC 598
+CCWNTSYC CQQ HW EH ++C
Sbjct: 1012 YCCWNTSYCDYPCQQAHW-PEHMKSC 1036
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 186 bits (471), Expect = 7e-47
Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 22/275 (8%)
Query: 99 HDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPVCRSIKKKNTNK 155
+D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP C I +
Sbjct: 82 NDFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPECEKITVAECIE 135
Query: 156 -----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLVHSAVDVPTIQE 203
+++ L+F + +MK+ D +K +HP Y + +D+ T+++
Sbjct: 136 TQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEK 195
Query: 204 KVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHELDELQLCKNCFY 263
+ Y E F ADA+ +LHN +I+ G + + IA+++ K HE++E+++C C+
Sbjct: 196 NAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYL 255
Query: 264 LSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSE 323
+ + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG H RAW+P
Sbjct: 256 AACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG-QHDRAWVPIN 314
Query: 324 NIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 358
N ++ I K + A E+E++ +R
Sbjct: 315 NCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 349
Score = 95.9 bits (237), Expect = 9e-20
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 401 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 460
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 816 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 875
Query: 461 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 513
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 876 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 927
Query: 514 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQWCYNCEEEAMY 572
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQWC NC++EA++
Sbjct: 928 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIF 986
Query: 573 HCCWNTSYCSIKCQQEHWHAEHKRTC 598
+CCWNTSYC CQQ HW EH ++C
Sbjct: 987 YCCWNTSYCDYPCQQAHW-PEHMKSC 1011
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 53.5 bits (127), Expect = 5e-07
Identities = 67/340 (19%), Positives = 137/340 (40%), Gaps = 62/340 (18%)
Query: 282 ELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSM 341
E++W K + + +KE+ + + W E I+++ +H R
Sbjct: 342 EMMWEKEEKMRRQEEMMWEKEEKMRRLE------EMMWEKEEKIRELEEKMHEQEKIREQ 395
Query: 342 GWKKACDEL--ELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGR 399
K+ +E E +R +E + W+ + + R +EE I + + ++ ++
Sbjct: 396 EEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEE---KIREQEKKMWRQEEKIHEQEKI 452
Query: 400 RNQSVEPKKEEPEPETEAVSSSQEIPTMPQPI-EKVSVSTQTKKLSASSPRMLHRSTQTT 458
R + ++EE + E + +EI + + E+ + Q +K+ +M
Sbjct: 453 REEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKM-------- 504
Query: 459 NDGVCQSMCHDKYTKIFNDFKDRMKSDHK-RETERVVREALEKLRS--EMEEEKRQAVNK 515
HD+ KI + + + K RE E +RE EK+R EM +E+ + + +
Sbjct: 505 ---------HDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGE 555
Query: 516 AVANMQG------------EMDRKCKQVKEKCK--EEFVEEIKKLATQHKQLISQTKKKQ 561
MQ E + K ++ KEK + EE + E ++ + ++++ + ++K
Sbjct: 556 QEEKMQEQEKMRRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKM 615
Query: 562 WCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRRK 601
W +EE M C+QE E + RR+
Sbjct: 616 W---EQEEKM-------------CEQEEKMQEQEEKMRRQ 639
Score = 38.5 bits (88), Expect = 0.018
Identities = 43/214 (20%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
R+ + ++R E ++ ++E+LK E AK + Q VE +K E + + +
Sbjct: 193 RYIEELTKERDALSLELYRNTITDEELK---EKNAKLQEKLQLVESEKSEIQLNVKELKR 249
Query: 421 SQEIPTMPQPIEKVSVSTQT--KKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDF 478
E + P +++ K+L + S ++ Q + + + + K++
Sbjct: 250 KLERAKLLLPQQQLQAEADHLGKELQSVSAKL---QAQVEENELWNRLNQQQEEKMWRQE 306
Query: 479 KDRMKSDHK-RETERVVREALEKLRSEMEEEKRQ--------AVNKAVANMQGEMDRKCK 529
+ + + K +E E +RE EK+R + E+ +RQ + M E + K +
Sbjct: 307 EKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMR 366
Query: 530 QVKEKC--KEEFVEEIKKLATQHKQLISQTKKKQ 561
+++E KEE + E+++ + +++ Q +K+Q
Sbjct: 367 RLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQ 400
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 53.1 bits (126), Expect = 7e-07
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 90 DEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIK 149
+E+D +H YC C GE+++CD C R YH CL E R W CP C
Sbjct: 369 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELD-RAPEGKWSCPHCEKEG 427
Query: 150 KKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRL 191
+ K+E Y +E + +K +++ H Y R+
Sbjct: 428 VQWEAKEEEEEY--------EEEGEEEGEKEEEDDHMEYCRV 461
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 81 EQEGYWLPGDEIDW--ETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRD-SS 137
E+E Y G+E E ++H YC C GE+L CD C YH CL+ L D +
Sbjct: 435 EEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP--LPDIPN 492
Query: 138 SPWQCPVC 145
W CP C
Sbjct: 493 GEWLCPRC 500
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 53.1 bits (126), Expect = 7e-07
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 90 DEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIK 149
+E+D +H YC C GE+++CD C R YH CL E R W CP C
Sbjct: 369 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELD-RAPEGKWSCPHCEKEG 427
Query: 150 KKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRL 191
+ K+E Y +E + +K +++ H Y R+
Sbjct: 428 VQWEAKEEEEEY--------EEEGEEEGEKEEEDDHMEYCRV 461
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 81 EQEGYWLPGDEIDW--ETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRD-SS 137
E+E Y G+E E ++H YC C GE+L CD C YH CL+ L D +
Sbjct: 435 EEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP--LPDIPN 492
Query: 138 SPWQCPVC 145
W CP C
Sbjct: 493 GEWLCPRC 500
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 53.1 bits (126), Expect = 7e-07
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 90 DEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIK 149
+E+D +H YC C GE+++CD C R YH CL E R W CP C
Sbjct: 428 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELD-RAPEGKWSCPHCEKEG 486
Query: 150 KKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRL 191
+ K+E Y +E + +K +++ H Y R+
Sbjct: 487 VQWEAKEEEEEY--------EEEGEEEGEKEEEDDHMEYCRV 520
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 81 EQEGYWLPGDEIDW--ETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRD-SS 137
E+E Y G+E E ++H YC C GE+L CD C YH CL+ L D +
Sbjct: 494 EEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP--LPDIPN 551
Query: 138 SPWQCPVC 145
W CP C
Sbjct: 552 GEWLCPRC 559
>gi|74027251 tripartite motif-containing 33 protein isoform beta [Homo
sapiens]
Length = 1110
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 98 NHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIKK------- 150
N DW C C G++L C+ C +V+H C L S W C CR I K
Sbjct: 886 NEDW-CAVCQNGGDLLCCEKCPKVFHLTCHVPTL-LSFPSGDWICTFCRDIGKPEVEYDC 943
Query: 151 ---KNTNKQEMGTYLRFIVSRMKERAI------DLNKKGKD---NKHPMYRRLVHSAVDV 198
+++ K + L + R ER + +L+ + ++ P Y +++ +D+
Sbjct: 944 DNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDL 1003
Query: 199 PTIQEKVNEGKYRSY---EEFKADAQLLLHNTVIFYGADSEQADIAR 242
T+++K+ + + Y ++F AD +L+ N F ADSE A +
Sbjct: 1004 STVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEADSEVAQAGK 1050
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 51.2 bits (121), Expect = 3e-06
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 22/247 (8%)
Query: 319 WIPSENIQDITVNIHRLHVKRSMGWKKACDEL--ELHQRFLREGRFWKSKNEDRGEEEAE 376
W E I+++ +H R K+ +E E +R +E + W+ + + R +EE
Sbjct: 340 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEK- 398
Query: 377 SSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSV 436
EQ ++ QE K G + + + ++EE + + E + +E ++ +
Sbjct: 399 ------IREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIRE----QEKKI 448
Query: 437 STQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVRE 496
Q +K+ M + + MC + + K R + + RE E+ +RE
Sbjct: 449 REQEEKIREQEEMMQEQEEKMGEQE--GKMCEQEAKMQEQEEKMRRQEEKIREQEKKIRE 506
Query: 497 ALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVK--EKCKEEFVEEIKKLATQHKQLI 554
EK+R E EE ++ K M + ++ C+Q + ++ +E+ + +K+ Q +L
Sbjct: 507 QEEKIR-EQEEMMQEQEEK----MWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEVRLR 561
Query: 555 SQTKKKQ 561
Q +K Q
Sbjct: 562 QQEEKMQ 568
Score = 35.0 bits (79), Expect = 0.20
Identities = 31/175 (17%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 388 KVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASS 447
++ Q+ K R+ + ++ ++E+ + + E + +E K+
Sbjct: 281 RLNQQQEEKMWRQEEKIQEREEKIQEQEEKIREQEE------------------KMRRQE 322
Query: 448 PRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEE 507
M + + + M +K KI + +++M K + R+ EK+R E+
Sbjct: 323 EMMWEKEEKMRRQ---EEMMWEKEEKI-RELEEKMHEQEKIREQEEKRQEEEKIR---EQ 375
Query: 508 EKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQW 562
EKRQ + +M R+ ++++E+ EE + E +++ + ++ + + ++K W
Sbjct: 376 EKRQ-------EQEAKMWRQEEKIREQ--EEKIREQEEMMQEQEEKMGEQEEKMW 421
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 49.3 bits (116), Expect = 1e-05
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 34/312 (10%)
Query: 282 ELVWAKMKGFGFWPAKVMQKED-------NQVDVRFFGHHHQRAWIPSENIQDITVNIHR 334
+L++AKMKG+ WPA+V + D N++ + FFG H+ A++ ++I + N +
Sbjct: 9 DLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFG-THETAFLGPKDIFPYSENKEK 67
Query: 335 L-HVKRSMGWKKACDELELHQ--RFLREGRFWKSKN--EDRGEEEAESSIS--------S 381
+ G+ + E++ + +F + K N D EE E+S+S
Sbjct: 68 YGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEK 127
Query: 382 TSNEQ----LKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVS 437
SNE + +T A++GR+ ++ + + E ++S + P+ +
Sbjct: 128 ASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATE 187
Query: 438 TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH--KRETERVVR 495
+ K P+M+ + + +D + + K + K + K D ++E ++ +
Sbjct: 188 VKIPK-PRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRK 246
Query: 496 EALEKLRSEMEEEKRQAVNK----AVANMQGEMDRKCKQVKEKCKEEFVEEIKK--LATQ 549
E +K + E KR+ + K + ++ + E D + + K K F ++ L Q
Sbjct: 247 EPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQ 306
Query: 550 HKQLISQTKKKQ 561
H++ + K+KQ
Sbjct: 307 HEKEAADRKRKQ 318
>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
sapiens]
Length = 333
Score = 49.3 bits (116), Expect = 1e-05
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 34/312 (10%)
Query: 282 ELVWAKMKGFGFWPAKVMQKED-------NQVDVRFFGHHHQRAWIPSENIQDITVNIHR 334
+L++AKMKG+ WPA+V + D N++ + FFG H+ A++ ++I + N +
Sbjct: 9 DLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFG-THETAFLGPKDIFPYSENKEK 67
Query: 335 L-HVKRSMGWKKACDELELHQ--RFLREGRFWKSKN--EDRGEEEAESSIS--------S 381
+ G+ + E++ + +F + K N D EE E+S+S
Sbjct: 68 YGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEK 127
Query: 382 TSNEQ----LKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVS 437
SNE + +T A++GR+ ++ + + E ++S + P+ +
Sbjct: 128 ASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATE 187
Query: 438 TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH--KRETERVVR 495
+ K P+M+ + + +D + + K + K + K D ++E ++ +
Sbjct: 188 VKIPK-PRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRK 246
Query: 496 EALEKLRSEMEEEKRQAVNK----AVANMQGEMDRKCKQVKEKCKEEFVEEIKK--LATQ 549
E +K + E KR+ + K + ++ + E D + + K K F ++ L Q
Sbjct: 247 EPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQ 306
Query: 550 HKQLISQTKKKQ 561
H++ + K+KQ
Sbjct: 307 HEKEAADRKRKQ 318
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 49.3 bits (116), Expect = 1e-05
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 34/312 (10%)
Query: 282 ELVWAKMKGFGFWPAKVMQKED-------NQVDVRFFGHHHQRAWIPSENIQDITVNIHR 334
+L++AKMKG+ WPA+V + D N++ + FFG H+ A++ ++I + N +
Sbjct: 9 DLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFG-THETAFLGPKDIFPYSENKEK 67
Query: 335 L-HVKRSMGWKKACDELELHQ--RFLREGRFWKSKN--EDRGEEEAESSIS--------S 381
+ G+ + E++ + +F + K N D EE E+S+S
Sbjct: 68 YGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEK 127
Query: 382 TSNEQ----LKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVS 437
SNE + +T A++GR+ ++ + + E ++S + P+ +
Sbjct: 128 ASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATE 187
Query: 438 TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH--KRETERVVR 495
+ K P+M+ + + +D + + K + K + K D ++E ++ +
Sbjct: 188 VKIPK-PRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRK 246
Query: 496 EALEKLRSEMEEEKRQAVNK----AVANMQGEMDRKCKQVKEKCKEEFVEEIKK--LATQ 549
E +K + E KR+ + K + ++ + E D + + K K F ++ L Q
Sbjct: 247 EPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQ 306
Query: 550 HKQLISQTKKKQ 561
H++ + K+KQ
Sbjct: 307 HEKEAADRKRKQ 318
>gi|21071070 transmembrane channel-like 1 [Homo sapiens]
Length = 760
Score = 48.5 bits (114), Expect = 2e-05
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 402 QSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDG 461
+ V+ K EE E ETE SS +E + + S+ + K R+ N+
Sbjct: 4 KKVQIKVEEKEDETEESSSEEEEEVEDKLPRRESLRPKRK-----------RTRDVINED 52
Query: 462 VCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQ 521
+ D+ T+ + + R + E E + E LE+L++E++E KRQ +
Sbjct: 53 DPEPEPEDEETRKAREKERRRRLKRGAEEEEIDEEELERLKAELDE-KRQIIATV----- 106
Query: 522 GEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQW 562
KCK K + K E ++E KK ++++ + + K K+W
Sbjct: 107 -----KCKPWKMEKKIEVLKEAKKFVSENEGALGKGKGKRW 142
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 48.5 bits (114), Expect = 2e-05
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 94 WETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVC 145
+ET++ D YC C GE+++CD C R YH CL E + W CP C
Sbjct: 338 YETDHQD-YCEVCQQGGEIILCDTCPRAYHLVCLDPELE-KAPEGKWSCPHC 387
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 81 EQEGY-WLPGDEIDWETE--------NHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEF 131
E+EG W P D+ D E E +H +C C GE+L CD C YH CL+
Sbjct: 388 EKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPL 447
Query: 132 RLRDSSSPWQCPVC 145
+ W CP C
Sbjct: 448 P-EIPNGEWLCPRC 460
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 47.8 bits (112), Expect = 3e-05
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 94 WETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVC 145
+ET++ D YC C GE+++CD C R YH CL + + W CP C
Sbjct: 365 YETDHQD-YCEVCQQGGEIILCDTCPRAYHMVCLDPDME-KAPEGKWSCPHC 414
Score = 40.8 bits (94), Expect = 0.004
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 89 GDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVC 145
G +++ E ++H +C C GE+L CD C YH CL+ + W CP C
Sbjct: 438 GGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLP-EIPNGEWLCPRC 493
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 47.0 bits (110), Expect = 5e-05
Identities = 55/283 (19%), Positives = 121/283 (42%), Gaps = 28/283 (9%)
Query: 299 MQKEDNQVDVRFFGHHHQR-AWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFL 357
+QK + + R QR +W+ ++ + ++ ++ +K +ELE Q+
Sbjct: 651 LQKAIEEEEARMREEESQRLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAE 710
Query: 358 REGRFWKS-------KNEDRGEEEAESSISSTSNEQLKVTQEPRAK-KGRRNQSVEPKKE 409
R K+ K E E++E + + + E K Q+ R + +G R ++V ++
Sbjct: 711 RASLEQKNRQMLEQLKEEIEASEKSEQAALNAAKE--KALQQLREQLEGERKEAVATLEK 768
Query: 410 EPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPR---MLHRSTQTTNDGVCQSM 466
E E E + SS E + VS+ KK+ + + L + V Q
Sbjct: 769 EHSAELERLCSSLEAK------HREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKS 822
Query: 467 CH-----DKYTKIFNDFKDRMKSDHKRETERVVRE---ALEKLRSEMEEEKRQAVNKAVA 518
H + + + + + ++ +H+R +++ E + K R + E E+R+ + +
Sbjct: 823 YHVAGYEHELSSLLREKRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLG 882
Query: 519 NMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 561
++ GE++R + + + + E+ K+L ++ Q +K Q
Sbjct: 883 HLTGELERLQRAHERELETVRQEQHKRLEDLRRRHREQERKLQ 925
Score = 38.5 bits (88), Expect = 0.018
Identities = 47/233 (20%), Positives = 94/233 (40%), Gaps = 32/233 (13%)
Query: 350 LELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKE 409
LE QR L E + +++ ++ E E L++ Q+ K + S+ + +
Sbjct: 603 LEQDQRHLLESK------QEKMQQLREKLCQEEEEEILRLHQQ----KEQSLSSLRERLQ 652
Query: 410 EPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKK--LSASSPRMLH--RSTQTTNDGVCQS 465
+ E EA +E + +V STQ + + A L R + ++
Sbjct: 653 KAIEEEEARMREEESQRLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAERA 712
Query: 466 MCHDKYTKIFNDFKDRMKSDHKRETERV---VREALEKLRSEMEEEKRQAVNKAVANMQG 522
K ++ K+ +++ K E + +AL++LR ++E E+++AV
Sbjct: 713 SLEQKNRQMLEQLKEEIEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLEKEHSA 772
Query: 523 EMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCC 575
E++R C ++ K H++++S +KK +EEA C
Sbjct: 773 ELERLCSSLEAK---------------HREVVSSLQKKIQEAQQKEEAQLQKC 810
Score = 36.6 bits (83), Expect = 0.068
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 8/206 (3%)
Query: 372 EEEAESSISSTSNEQLK--VTQEPRAKKGRRNQSVE---PKKEEPEPETEAVSSSQEIPT 426
++E +S S E+L + E RA+ R+ + E P+ E +PE + E
Sbjct: 456 QDELQSKQSKGLEERLSPPLPHEERAQSPPRSLATEEEPPQGPEGQPEWKEAEELGEDSA 515
Query: 427 MPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH 486
++ Q A+ + + +Q G Q D K+ + S
Sbjct: 516 ASLSLQLSLQREQAPSPPAACEKGKEQHSQAEELGPGQEEAEDPEEKVAVSPTPPV-SPE 574
Query: 487 KRETERVV--REALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIK 544
R TE V + E MEE Q + + ++ K +Q++EK +E EEI
Sbjct: 575 VRSTEPVAPPEQLSEAALKAMEEAVAQVLEQDQRHLLESKQEKMQQLREKLCQEEEEEIL 634
Query: 545 KLATQHKQLISQTKKKQWCYNCEEEA 570
+L Q +Q +S +++ EEEA
Sbjct: 635 RLHQQKEQSLSSLRERLQKAIEEEEA 660
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 46.2 bits (108), Expect = 9e-05
Identities = 44/225 (19%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 343 WKKACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQ 402
W K +E E H++ R+ + + + E+R E + +Q + Q+ R ++ R +
Sbjct: 457 WLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERRE 516
Query: 403 SVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPR--MLHRSTQTTND 460
++EE E + + S Q++ + + + + +K R L R + D
Sbjct: 517 QRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRD 576
Query: 461 GVCQSMCHDKYTKIFNDFKDRMKSDHKR-ETERVVREALEK---LRSEMEEEKRQAVNKA 516
+ + + ++ + ++R++ KR E ER+ +E + R E EEE+RQ + K+
Sbjct: 577 QLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKS 636
Query: 517 VANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 561
+ + +R+ +Q++ + +E + +K+ + ++ + Q K++
Sbjct: 637 ----EEQEERRQQQLRREQQERREQRLKR--EEEEERLEQRLKRE 675
Score = 43.9 bits (102), Expect = 4e-04
Identities = 44/221 (19%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 348 DELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEP---RAKKGRRNQSV 404
+E + QR RE + + + E+R E++ E EQ + +E R ++ RR Q +
Sbjct: 292 EEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQL 351
Query: 405 EPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSP----RMLHRSTQTTND 460
++EE E + + QE Q + + + ++L + L R Q +
Sbjct: 352 RREQEEERREQQ-LRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRRE 410
Query: 461 GVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANM 520
Q + ++ + + + R + + +R ++ +E E+ +EE+R + +
Sbjct: 411 ---QQLRREQQLR--REQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETE 465
Query: 521 QGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 561
+ E +R+ +Q+K +EE E KL + ++ + +++Q
Sbjct: 466 RHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQ 506
Score = 37.7 bits (86), Expect = 0.031
Identities = 38/219 (17%), Positives = 90/219 (41%), Gaps = 7/219 (3%)
Query: 348 DELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKK--GRRNQSVE 405
D + R+ + W+ + E R EEE S E+ ++ R ++ R + E
Sbjct: 165 DRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGRE 224
Query: 406 PKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSP---RMLHRSTQTTNDGV 462
K+++ + V +E + + + + +KL P R L +
Sbjct: 225 EKQQQRRERQDRVFQEEEEKEWRK--RETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLE 282
Query: 463 CQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQG 522
Q + ++ + + R + +R+ E RE E+ R + E ++Q + +
Sbjct: 283 RQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRRE 342
Query: 523 EMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 561
+ +R+ +Q++ + +EE E+ + + ++ Q +++Q
Sbjct: 343 QEERREQQLRREQEEERREQQLRREQEEERREQQLRREQ 381
Score = 33.9 bits (76), Expect = 0.44
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 351 ELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEE 410
E ++FL+E + + + +R E E T EQL+ ++ R +K + + P++EE
Sbjct: 1704 ERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLR--RQERYRKILEEEQLRPEREE 1761
Query: 411 PE-PETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHD 469
+ E +E + Q E+ + +Q S R Q + Q +
Sbjct: 1762 QQLRRQERDRKFREEEQLRQEREEQQLRSQ------ESDRKFREEEQLRQEREEQQLRPQ 1815
Query: 470 KYTKIFNDFKDRMKSDH---KRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDR 526
+ D K R + + + + +R+ +E + R+E + ++ + + E ++
Sbjct: 1816 Q-----RDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQ 1870
Query: 527 KCKQVKE-KCKEEFVEEIKKLATQHKQL 553
K +Q +E K +EE + +K +H+Q+
Sbjct: 1871 KRRQERERKLREEHIRRQQKEEQRHRQV 1898
Score = 33.5 bits (75), Expect = 0.58
Identities = 56/280 (20%), Positives = 107/280 (38%), Gaps = 25/280 (8%)
Query: 338 KRSMGWKKACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKK 397
+R K+ E E Q+ L+ + + + E+ E E+ + E R K+
Sbjct: 615 RREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKR 674
Query: 398 GRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQT 457
+ E + E E E IP +E + + Q+K S + R Q
Sbjct: 675 EHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQE 734
Query: 458 TND----------GVCQSMCH--DKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEM 505
+ + H + + DF + +++ K E R A LR +
Sbjct: 735 QEEKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQR 794
Query: 506 EE----EKRQAVNKAVANMQGEMDRKCKQVKEKCKE-EFVEEIKKLATQHKQLISQTKKK 560
E E+RQ + + E +++ +Q +E+ KE +F+EE ++L Q ++ Q +++
Sbjct: 795 ERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQL--QRRERAQQLQEE 852
Query: 561 QWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRR 600
+ ++E S + Q+ W E +R RR
Sbjct: 853 EDGLQEDQER------RRSQEQRRDQKWRWQLEEERKRRR 886
Score = 33.1 bits (74), Expect = 0.75
Identities = 41/221 (18%), Positives = 90/221 (40%), Gaps = 16/221 (7%)
Query: 351 ELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEE 410
E + RE R + + E + E + + L+ +E R ++ R Q + KK +
Sbjct: 908 EEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQ 967
Query: 411 PEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDK 470
+ E E P + E+ + ++L ++L + + +
Sbjct: 968 QKEE----QLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRR----RQEWERQ 1019
Query: 471 YTKIFNDFKDRMKSDHKR--ETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKC 528
Y K KD ++ + ++ ER R E+ R EEE+ Q + + + E R+
Sbjct: 1020 YRK-----KDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQ 1074
Query: 529 KQVKE-KCKEEFVEEIKKLATQHKQLISQTKKKQWCYNCEE 568
+ ++ + +EE +E ++L + + + ++++ C EE
Sbjct: 1075 ELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEE 1115
Score = 32.7 bits (73), Expect = 0.98
Identities = 36/213 (16%), Positives = 87/213 (40%), Gaps = 15/213 (7%)
Query: 357 LREGRFWKSKNEDRG-EEEAESSISSTSNEQLKVTQEPRAKKGRRNQSV-EPKKEEPEPE 414
LR+ R K + E++ +E E + ++ + +E + ++ R++ E + EPE
Sbjct: 1455 LRQERHRKFREEEQLLQEREEQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPE 1514
Query: 415 TEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKI 474
+ + Q++ + + + Q ++ R R + + + ++
Sbjct: 1515 RKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLS- 1573
Query: 475 FNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEK 534
R + D K E E+ R ME+E++ + ++ E DRK ++ ++
Sbjct: 1574 ------RQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQL 1627
Query: 535 CKEEFVEEI------KKLATQHKQLISQTKKKQ 561
+E +++ +K + QL Q +++Q
Sbjct: 1628 LQEREEQQLHRQERDRKFLEEEPQLRRQEREQQ 1660
Score = 31.6 bits (70), Expect = 2.2
Identities = 44/228 (19%), Positives = 96/228 (42%), Gaps = 26/228 (11%)
Query: 348 DELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPK 407
+E E +R RE ++ K K + EE+ E K ++ R KK R + ++ +
Sbjct: 946 EEREKRRRQERERQYRKDKKLQQKEEQL------LGEEPEKRRRQEREKKYREEEELQQE 999
Query: 408 KEEPEPETEAVSSSQEIPTMP------QPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDG 461
+E+ E QE Q E+ + + +K +R +
Sbjct: 1000 EEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQE 1059
Query: 462 VCQSMCHDKYTKIFNDFKDRMKSDHK--RETERVVREALEKLRSE------MEEEKRQAV 513
Q + ++ T+ + + + + + + +E E+++RE EK R + EEE+ Q
Sbjct: 1060 EEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQE 1119
Query: 514 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 561
+ + + E R+ + ++ +EE V++ + +QL+ + +K+
Sbjct: 1120 EEQLLREEREKRRRQELERQYREEEEVQQ------EEEQLLREEPEKR 1161
Score = 31.6 bits (70), Expect = 2.2
Identities = 51/247 (20%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 367 NEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPT 426
+ DR E E + +QL+ + R + Q ++E + E QE+
Sbjct: 1664 DRDRKFREEEQLLQEGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELER 1723
Query: 427 MPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSD- 485
+ E++ T+ ++L ++Y KI + + R + +
Sbjct: 1724 KFREEEQLRQETEQEQLRR----------------------QERYRKILEEEQLRPEREE 1761
Query: 486 ---HKRETERVVREALEKLRSEMEEEK---RQAVNKAVANMQGEMDRKCKQVKEKCKE-- 537
++E +R RE E+LR E EE++ +++ K Q +R+ +Q++ + ++
Sbjct: 1762 QQLRRQERDRKFREE-EQLRQEREEQQLRSQESDRKFREEEQLRQEREEQQLRPQQRDGK 1820
Query: 538 -EFVEEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHW-HAEHK 595
+ EE +L Q ++L + ++ Y EE+ + T S + +QE W E K
Sbjct: 1821 YRWEEEQLQLEEQEQRLRQERDRQ---YRAEEQ------FATQEKSRREEQELWQEEEQK 1871
Query: 596 RTCRRKR 602
R R+R
Sbjct: 1872 RRQERER 1878
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 98 NHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIKK------- 150
N DW C C G++L C+ C +V+H C L S W C CR I K
Sbjct: 886 NEDW-CAVCQNGGDLLCCEKCPKVFHLTCHVPTL-LSFPSGDWICTFCRDIGKPEVEYDC 943
Query: 151 ---KNTNKQEMGTYLRFIVSRMKERAI------DLNKKGKD---NKHPMYRRLVHSAVDV 198
+++ K + L + R ER + +L+ + ++ P Y +++ +D+
Sbjct: 944 DNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDL 1003
Query: 199 PTIQEKVNEGKYRSY---EEFKADAQLLLHN 226
T+++K+ + + Y ++F AD +L+ N
Sbjct: 1004 STVKKKLQKKHSQHYQIPDDFVADVRLIFKN 1034
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 45.1 bits (105), Expect = 2e-04
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 83 EGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQC 142
E +W GD H+ +C C G++L+CD C RVYH CL + W C
Sbjct: 432 EEHWPKGDI-------HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGM-WIC 483
Query: 143 PVCR 146
P C+
Sbjct: 484 PRCQ 487
>gi|38327039 heat shock 70kDa protein 4 [Homo sapiens]
Length = 840
Score = 44.3 bits (103), Expect = 3e-04
Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 24/221 (10%)
Query: 369 DRGEEEAESSISSTSNEQLKVTQE-PRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTM 427
+ EE E+ ++ E+++V QE P ++ ++ E K E E ET S +
Sbjct: 504 EENEEPMETDQNAKEEEKMQVDQEEPHVEEQQQQTPAENKAESEEMETSQAGSKDKKMDQ 563
Query: 428 PQPIEKVSVSTQTKKLSASSPRMLHRSTQTTN---DGVCQSMCHDKYTKIFNDFKD---- 480
P +K V T T L + + + N + + + DK K ND K+
Sbjct: 564 PPQAKKAKVKTSTVDLPIENQLLWQIDREMLNLYIENEGKMIMQDKLEKERNDAKNAVEE 623
Query: 481 ---RMKSDHKRETERVVRE--------ALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCK 529
M+ E E+ V E LE + + E+ + + E+ +
Sbjct: 624 YVYEMRDKLSGEYEKFVSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKNLGQ 683
Query: 530 QVKEKCKE-----EFVEEIKKLATQHKQLISQTKKKQWCYN 565
+K + +E + EE+ K Q+ ++IS K K+ Y+
Sbjct: 684 PIKIRFQESEERPKLFEELGKQIQQYMKIISSFKNKEDQYD 724
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 43.9 bits (102), Expect = 4e-04
Identities = 61/306 (19%), Positives = 125/306 (40%), Gaps = 39/306 (12%)
Query: 297 KVMQKEDNQVDVRFFGHHHQRAW-----------IPSENIQDITVNIHRLHVKRSMGWKK 345
+++Q++++ H Q+A I E +Q +T N+ + H+ ++
Sbjct: 1667 QLLQEQESVKQAHLRNEHFQKAIEDKSRSLNESKIEIERLQSLTENLTKEHLML----EE 1722
Query: 346 ACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLK----VTQEPRAKKGRRN 401
L L LR GR +++ E S + ++N L+ + R ++ R
Sbjct: 1723 ELRNLRLEYDDLRRGRSEADSDKNATILELRSQLQISNNRTLELQGLINDLQRERENLRQ 1782
Query: 402 QSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLH--------R 453
+ + +K+ E S + + Q E+ S+ + K L R+ +
Sbjct: 1783 EIEKFQKQALEASNRIQESKNQCTQVVQ--ERESLLVKIKVLEQDKARLQRLEDELNRAK 1840
Query: 454 STQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQ-- 511
ST V Q + +K +I ND ++ K+ + R+ EA+ K+ SE E+ +R+
Sbjct: 1841 STLEAETRVKQRLECEKQ-QIQNDL-NQWKTQYSRK-----EEAIRKIESEREKSEREKN 1893
Query: 512 AVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKK-KQWCYNCEEEA 570
++ + +Q E+ R ++ + K ++ E +L T+ + + K +Q Y E
Sbjct: 1894 SLRSEIERLQAEIKRIEERCRRKLEDSTRETQSQLETERSRYQREIDKLRQRPYGSHRET 1953
Query: 571 MYHCCW 576
C W
Sbjct: 1954 QTECEW 1959
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 43.9 bits (102), Expect = 4e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 99 HDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCR 146
H+ +C C G++L+CD C RVYH CL + W CP C+
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGM-WICPRCQ 533
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 43.5 bits (101), Expect = 6e-04
Identities = 56/230 (24%), Positives = 95/230 (41%), Gaps = 49/230 (21%)
Query: 362 FWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSS 421
+W+ K E E+ S T + + +T EP A+ G + + E P PET+ S
Sbjct: 334 YWEKKQE-------EARKSPTPSAPVPLT-EPAAQPGEGHAAPTNVVENPLPETD----S 381
Query: 422 QEIPTMPQPIEKV--------------------SVSTQTKKLSASSPRMLHRSTQTTNDG 461
Q IP P + +V+T ++ ++ R TND
Sbjct: 382 QPIPPSGGPFSEPQFHNGESEESHEQFLKALQNAVTTFVNRMKSNH----MRGRSITNDS 437
Query: 462 VCQSM------CHDKYTKIFNDFKDRM----KSDHKRETERVVREALEKLRSEMEEEKRQ 511
S+ H + ++ N +R K R R AL LR E E+ R+
Sbjct: 438 AVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALSALREEHREKLRR 497
Query: 512 AVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 561
A +A Q ++ +K + +++K K+E++E ++LA Q Q Q K++Q
Sbjct: 498 AAEEAERQRQIQLAQKLEIMRQK-KQEYLEVQRQLAIQRLQ--EQEKERQ 544
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 43.1 bits (100), Expect = 7e-04
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 425 PTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKS 484
P M + I+ + +S T S M Q D + +S ++ + + + +
Sbjct: 865 PEMNKQIKNLEISIDTLMAKIKSTMMTQEQIQKEYDALVKSS-----EELLSALQKKKQQ 919
Query: 485 DHKRETERVVREALEKLRSEMEE-EKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEI 543
+ + E R ++E +EK R EE EKR+ + M+ EM+ K KQ +E+ K+ +E
Sbjct: 920 EEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRKQEEEERKKREDDEK 979
Query: 544 KKLATQHKQLISQTKKK 560
+ A QL Q +++
Sbjct: 980 RIQAEVEAQLARQKEEE 996
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 43.1 bits (100), Expect = 7e-04
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 383 SNEQLKVTQEPRAKKGRRNQSVE---PKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQ 439
S E++ V ++ K + E P KEEP P V+ Q P+ ++ +V +
Sbjct: 582 SKEKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKE 641
Query: 440 TKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALE 499
TK P + V + + K +K + K + E V +E +
Sbjct: 642 TK----VKPEDKKEEKEKPKKEVAK-----------KEDKTPIKKEEKPKKEEVKKEVKK 686
Query: 500 KLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEF--VEEIKKLATQHKQL---I 554
+++ E ++E ++ V K + + + K ++ KE KEE +EIKKL K+ +
Sbjct: 687 EIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPL 746
Query: 555 SQTKK 559
S+ KK
Sbjct: 747 SEAKK 751
Score = 35.4 bits (80), Expect = 0.15
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 385 EQLKVTQEPRAKKGRRNQSVEPKKEEP-EPETEAVSSSQEIPTMPQPIEKVSVSTQTKKL 443
E KV + K + V KK++P + ET+ + +E+P+ +P V K+
Sbjct: 567 EVTKVNHVEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEP-SPVKAEVAEKQA 625
Query: 444 SASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRS 503
+ P+ T K TK+ K K + K + ++ V + +K
Sbjct: 626 TDVKPKAAKEKTVK------------KETKV----KPEDKKEEKEKPKKEVAKKEDKTPI 669
Query: 504 EMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKK 560
+ EE+ ++ K + + + K + KE KE +E+KK + + K+ + + +K+
Sbjct: 670 KKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKE 727
Score = 33.1 bits (74), Expect = 0.75
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 356 FLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAK-KGRRNQSVEPKKEEPEPE 414
++RE R + +DR EE+ + +I EQ + + K + R + EP+K E E
Sbjct: 985 YIREKRESVASGDDRAEEDMDEAIEKGEAEQSEEEADEEDKAEDAREEEYEPEKMEAEDY 1044
Query: 415 TEA-VSSSQEIPTMPQPIEKVSVSTQTKKLSASSP 448
A V + E + + ++T TK+L A SP
Sbjct: 1045 VMAVVDKAAEAGGAEE--QYGFLTTPTKQLGAQSP 1077
Score = 31.2 bits (69), Expect = 2.9
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 366 KNEDRGEEEAESSISSTSNEQLKVTQEPRAKKG-RRNQSVEPKKEEPEPETEAVSSSQEI 424
K E + EE+ E E K T KK ++ + E KKEE EP+ +EI
Sbjct: 685 KKEIKKEEKKEPK-----KEVKKETPPKEVKKEVKKEEKKEVKKEEKEPK-------KEI 732
Query: 425 PTMPQPIEKVSVS-TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDK 470
+P+ +K S ++ KK +A P++ + D V +K
Sbjct: 733 KKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKEK 779
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 486 HKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQV--KEKCK-EEFVEE 542
H+ + V E +K + E KRQA+ + + E +RK + E+ K E V E
Sbjct: 397 HRPASGYVPEEIWKKAEEAVNEVKRQAMTE-LQKAVSEAERKAHDMITTERAKMERTVAE 455
Query: 543 IKKLATQHKQLI--SQTKKKQWCYNCEEEAMYHC--CWNTSYCSIKCQQEHWHAEH 594
K+ A + + Q + C+NC +A C C YC CQ + W H
Sbjct: 456 AKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHH 511
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 486 HKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQV--KEKCK-EEFVEE 542
H+ + V E +K + E KRQA+ + + E +RK + E+ K E V E
Sbjct: 397 HRPASGYVPEEIWKKAEEAVNEVKRQAMTE-LQKAVSEAERKAHDMITTERAKMERTVAE 455
Query: 543 IKKLATQHKQLI--SQTKKKQWCYNCEEEAMYHC--CWNTSYCSIKCQQEHWHAEH 594
K+ A + + Q + C+NC +A C C YC CQ + W H
Sbjct: 456 AKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHH 511
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.130 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,484,212
Number of Sequences: 37866
Number of extensions: 1118774
Number of successful extensions: 8797
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 536
Number of HSP's that attempted gapping in prelim test: 6978
Number of HSP's gapped (non-prelim): 2075
length of query: 602
length of database: 18,247,518
effective HSP length: 108
effective length of query: 494
effective length of database: 14,157,990
effective search space: 6994047060
effective search space used: 6994047060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.